Clone Name | rbasd22c07 |
---|---|
Clone Library Name | barley_pub |
>SUT34_ARATH (Q9LW86) Probable sulfate transporter 3.4| Length = 653 Score = 47.4 bits (111), Expect = 3e-05 Identities = 22/28 (78%), Positives = 25/28 (89%) Frame = +1 Query: 424 SMRWPKFFWISACAPLASVIVSTLLVFL 507 SMR PK FWISA +PLASVI+STLLV+L Sbjct: 272 SMRKPKLFWISAASPLASVIISTLLVYL 299
>SUT33_ARATH (Q9SXS2) Probable sulfate transporter 3.3 (AST91)| Length = 631 Score = 47.0 bits (110), Expect = 4e-05 Identities = 24/39 (61%), Positives = 28/39 (71%) Frame = +1 Query: 394 LTFCVHVYVQSMRWPKFFWISACAPLASVIVSTLLVFLF 510 L F + SM+ PK FW+SA APL SVIVSTLLVF+F Sbjct: 239 LLFLLSTRHLSMKKPKLFWVSAGAPLLSVIVSTLLVFVF 277 Score = 30.8 bits (68), Expect = 3.2 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = +1 Query: 523 QLVLVNPTGEVMEKIQRANDAHNHFRQD 606 +LV VNP EV+EK+QRA++ R + Sbjct: 581 ELVFVNPLSEVVEKLQRADEQKEFMRPE 608
>SUT11_ARATH (Q9SAY1) Sulfate transporter 1.1 (High-affinity sulfate transporter| 1) (Hst1At) (AST101) Length = 649 Score = 41.2 bits (95), Expect = 0.002 Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Frame = +1 Query: 361 HGWLVYAETIRLTFCVHVYVQSM---RWPKFFWISACAPLASVIVSTLLVFLFSLPSQLV 531 HGW I +F + V R K FW+ A APL SVI+ST VF+F Q V Sbjct: 245 HGWNWQTIVIGASFLTFLLVTKFIGKRNRKLFWVPAIAPLISVIISTFFVFIFRADKQGV 304 Query: 532 LV 537 + Sbjct: 305 QI 306
>SUT13_ARATH (Q9FEP7) Sulfate transporter 1.3| Length = 656 Score = 40.4 bits (93), Expect = 0.004 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 3/85 (3%) Frame = +1 Query: 262 FIVVVKFLRHTYLL**PVLVATLSISLHS*LFFHGWLVYAETIRLTFCVHVYVQSM---R 432 F+ + KF + T ++ +++++ S H HGW I +F + + + R Sbjct: 228 FLGINKFTKKTDII---AVLSSVISSAH-----HGWNWQTILISASFLIFLLISKFIGKR 279 Query: 433 WPKFFWISACAPLASVIVSTLLVFL 507 K FWI A APL SVI+ST V++ Sbjct: 280 NKKLFWIPAIAPLVSVIISTFFVYI 304
>SUT31_ARATH (Q9SV13) Sulfate transporter 3.1 (AST12) (AtST1)| Length = 658 Score = 39.7 bits (91), Expect = 0.007 Identities = 18/37 (48%), Positives = 26/37 (70%) Frame = +1 Query: 394 LTFCVHVYVQSMRWPKFFWISACAPLASVIVSTLLVF 504 L F + S++ PKFFW++A APL SVI+ +LLV+ Sbjct: 255 LFFLLSTRYFSIKKPKFFWVAAMAPLTSVILGSLLVY 291
>SUT22_ARATH (P92946) Sulfate transporter 2.2 (AST56) (AtH14)| Length = 658 Score = 38.9 bits (89), Expect = 0.012 Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%) Frame = +1 Query: 316 LVATLSISLHS*LFFHGWLVYAETIRLTFCVHVYVQSM---RWPKFFWISACAPLASVIV 486 +V+ LS HS H W I +F + + + R K FWI A APL SV++ Sbjct: 235 VVSVLSSVFHS--LHHPWQPLNFVIGSSFLIFILLARFIGKRNNKLFWIPAMAPLISVVL 292 Query: 487 STLLVFLFSLPSQLVLV 537 +TL+V+L + S+ V + Sbjct: 293 ATLIVYLSNAESRGVKI 309
>SUT3_STYHA (P53393) Low affinity sulphate transporter 3| Length = 644 Score = 38.5 bits (88), Expect = 0.015 Identities = 17/23 (73%), Positives = 20/23 (86%) Frame = +1 Query: 439 KFFWISACAPLASVIVSTLLVFL 507 KFFW+ A APL SVI+STL+VFL Sbjct: 267 KFFWLPAIAPLLSVILSTLIVFL 289
>SUT32_ARATH (O04289) Sulfate transporter 3.2 (AST77)| Length = 646 Score = 38.1 bits (87), Expect = 0.020 Identities = 24/65 (36%), Positives = 33/65 (50%) Frame = +1 Query: 394 LTFCVHVYVQSMRWPKFFWISACAPLASVIVSTLLVFLFSLPSQLVLVNPTGEVMEKIQR 573 L F + S + PK FWISA +PL SVI T +FL+ L Q + GE+ + I Sbjct: 246 LIFLLTTKYISKKRPKLFWISAMSPLVSVIFGT--IFLYFLHDQFHGIQFIGELKKGINP 303 Query: 574 ANDAH 588 + H Sbjct: 304 PSITH 308
>SUT1_STYHA (P53391) High affinity sulphate transporter 1| Length = 667 Score = 38.1 bits (87), Expect = 0.020 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 3/52 (5%) Frame = +1 Query: 361 HGWLVYAETIRLTFCVHVYVQ---SMRWPKFFWISACAPLASVIVSTLLVFL 507 HGW I L+F + + + + + K FW+SA +P+ SVIVST V++ Sbjct: 265 HGWNWETILIGLSFLIFLLITKYIAKKNKKLFWVSAISPMISVIVSTFFVYI 316
>SUT12_ARATH (Q9MAX3) Sulfate transporter 1.2| Length = 653 Score = 37.7 bits (86), Expect = 0.026 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Frame = +1 Query: 361 HGW---LVYAETIRLTFCVHVYVQSMRWPKFFWISACAPLASVIVSTLLVFLFSLPSQLV 531 HGW + LTF + + + K FW+ A APL SVIVST V++ Q V Sbjct: 250 HGWNWQTILIGASFLTFLLTSKIIGKKSKKLFWVPAIAPLISVIVSTFFVYITRADKQGV 309 Query: 532 LV 537 + Sbjct: 310 QI 311
>SUT21_ARATH (O04722) Sulfate transporter 2.1 (AST68)| Length = 677 Score = 37.4 bits (85), Expect = 0.034 Identities = 17/38 (44%), Positives = 25/38 (65%) Frame = +1 Query: 394 LTFCVHVYVQSMRWPKFFWISACAPLASVIVSTLLVFL 507 L+F + ++ K FW+ A APL +V+VSTL+VFL Sbjct: 289 LSFILITRFIGKKYKKLFWLPAIAPLIAVVVSTLMVFL 326
>SUT2_STYHA (P53392) High affinity sulphate transporter 2| Length = 662 Score = 36.2 bits (82), Expect = 0.077 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%) Frame = +1 Query: 361 HGWLVYAETIRLTFCVHVYVQ---SMRWPKFFWISACAPLASVIVSTLLVFL 507 HGW I L+F + + + + + K FW+SA +P+ VIVST V++ Sbjct: 260 HGWNWETILIGLSFLIFLLITKYIAKKNKKLFWVSAISPMICVIVSTFFVYI 311
>SUT35_ARATH (Q94LW6) Probable sulfate transporter 3.5| Length = 634 Score = 34.7 bits (78), Expect = 0.22 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 5/40 (12%) Frame = +1 Query: 403 CVHVYVQS-----MRWPKFFWISACAPLASVIVSTLLVFL 507 C V++QS R+PK FW+SA P+ V+V ++ +L Sbjct: 248 CFLVFLQSTRYIKQRYPKLFWVSAMGPMVVVVVGCVVAYL 287
>ATPF_MYCGE (P47643) ATP synthase B chain precursor (EC 3.6.3.14)| Length = 208 Score = 33.1 bits (74), Expect = 0.65 Identities = 18/52 (34%), Positives = 28/52 (53%) Frame = +1 Query: 445 FWISACAPLASVIVSTLLVFLFSLPSQLVLVNPTGEVMEKIQRANDAHNHFR 600 FW+ LA I+ TL++FLF P+Q L N + +I++AN+ R Sbjct: 48 FWVFITHLLAFFILLTLMIFLFWKPTQRFLNNRKNLLEAQIKQANELEKQAR 99
>FENR_ANAVT (Q44549) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)| Length = 440 Score = 29.3 bits (64), Expect = 9.4 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -2 Query: 542 GFTSTSCEGREKRKTSSVDTMTDAKGAHAEIQKN 441 GF E + K+K + +TMT AK HA++ N Sbjct: 117 GFAKPPAEEQLKKKDNKGNTMTQAKAKHADVPVN 150
>FENR_ANASP (P58558) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)| Length = 440 Score = 29.3 bits (64), Expect = 9.4 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -2 Query: 542 GFTSTSCEGREKRKTSSVDTMTDAKGAHAEIQKN 441 GF E + K+K + +TMT AK HA++ N Sbjct: 117 GFAKPPAEEQLKKKDNKGNTMTQAKAKHADVPVN 150 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,492,838 Number of Sequences: 219361 Number of extensions: 1804460 Number of successful extensions: 4839 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 4697 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4837 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5424720305 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)