ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd22c07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SUT34_ARATH (Q9LW86) Probable sulfate transporter 3.4 47 3e-05
2SUT33_ARATH (Q9SXS2) Probable sulfate transporter 3.3 (AST91) 47 4e-05
3SUT11_ARATH (Q9SAY1) Sulfate transporter 1.1 (High-affinity sulf... 41 0.002
4SUT13_ARATH (Q9FEP7) Sulfate transporter 1.3 40 0.004
5SUT31_ARATH (Q9SV13) Sulfate transporter 3.1 (AST12) (AtST1) 40 0.007
6SUT22_ARATH (P92946) Sulfate transporter 2.2 (AST56) (AtH14) 39 0.012
7SUT3_STYHA (P53393) Low affinity sulphate transporter 3 39 0.015
8SUT32_ARATH (O04289) Sulfate transporter 3.2 (AST77) 38 0.020
9SUT1_STYHA (P53391) High affinity sulphate transporter 1 38 0.020
10SUT12_ARATH (Q9MAX3) Sulfate transporter 1.2 38 0.026
11SUT21_ARATH (O04722) Sulfate transporter 2.1 (AST68) 37 0.034
12SUT2_STYHA (P53392) High affinity sulphate transporter 2 36 0.077
13SUT35_ARATH (Q94LW6) Probable sulfate transporter 3.5 35 0.22
14ATPF_MYCGE (P47643) ATP synthase B chain precursor (EC 3.6.3.14) 33 0.65
15FENR_ANAVT (Q44549) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR) 29 9.4
16FENR_ANASP (P58558) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR) 29 9.4

>SUT34_ARATH (Q9LW86) Probable sulfate transporter 3.4|
          Length = 653

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = +1

Query: 424 SMRWPKFFWISACAPLASVIVSTLLVFL 507
           SMR PK FWISA +PLASVI+STLLV+L
Sbjct: 272 SMRKPKLFWISAASPLASVIISTLLVYL 299



to top

>SUT33_ARATH (Q9SXS2) Probable sulfate transporter 3.3 (AST91)|
          Length = 631

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 24/39 (61%), Positives = 28/39 (71%)
 Frame = +1

Query: 394 LTFCVHVYVQSMRWPKFFWISACAPLASVIVSTLLVFLF 510
           L F +     SM+ PK FW+SA APL SVIVSTLLVF+F
Sbjct: 239 LLFLLSTRHLSMKKPKLFWVSAGAPLLSVIVSTLLVFVF 277



 Score = 30.8 bits (68), Expect = 3.2
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +1

Query: 523 QLVLVNPTGEVMEKIQRANDAHNHFRQD 606
           +LV VNP  EV+EK+QRA++     R +
Sbjct: 581 ELVFVNPLSEVVEKLQRADEQKEFMRPE 608



to top

>SUT11_ARATH (Q9SAY1) Sulfate transporter 1.1 (High-affinity sulfate transporter|
           1) (Hst1At) (AST101)
          Length = 649

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
 Frame = +1

Query: 361 HGWLVYAETIRLTFCVHVYVQSM---RWPKFFWISACAPLASVIVSTLLVFLFSLPSQLV 531
           HGW      I  +F   + V      R  K FW+ A APL SVI+ST  VF+F    Q V
Sbjct: 245 HGWNWQTIVIGASFLTFLLVTKFIGKRNRKLFWVPAIAPLISVIISTFFVFIFRADKQGV 304

Query: 532 LV 537
            +
Sbjct: 305 QI 306



to top

>SUT13_ARATH (Q9FEP7) Sulfate transporter 1.3|
          Length = 656

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
 Frame = +1

Query: 262 FIVVVKFLRHTYLL**PVLVATLSISLHS*LFFHGWLVYAETIRLTFCVHVYVQSM---R 432
           F+ + KF + T ++    +++++  S H     HGW      I  +F + + +      R
Sbjct: 228 FLGINKFTKKTDII---AVLSSVISSAH-----HGWNWQTILISASFLIFLLISKFIGKR 279

Query: 433 WPKFFWISACAPLASVIVSTLLVFL 507
             K FWI A APL SVI+ST  V++
Sbjct: 280 NKKLFWIPAIAPLVSVIISTFFVYI 304



to top

>SUT31_ARATH (Q9SV13) Sulfate transporter 3.1 (AST12) (AtST1)|
          Length = 658

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 18/37 (48%), Positives = 26/37 (70%)
 Frame = +1

Query: 394 LTFCVHVYVQSMRWPKFFWISACAPLASVIVSTLLVF 504
           L F +     S++ PKFFW++A APL SVI+ +LLV+
Sbjct: 255 LFFLLSTRYFSIKKPKFFWVAAMAPLTSVILGSLLVY 291



to top

>SUT22_ARATH (P92946) Sulfate transporter 2.2 (AST56) (AtH14)|
          Length = 658

 Score = 38.9 bits (89), Expect = 0.012
 Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
 Frame = +1

Query: 316 LVATLSISLHS*LFFHGWLVYAETIRLTFCVHVYVQSM---RWPKFFWISACAPLASVIV 486
           +V+ LS   HS    H W      I  +F + + +      R  K FWI A APL SV++
Sbjct: 235 VVSVLSSVFHS--LHHPWQPLNFVIGSSFLIFILLARFIGKRNNKLFWIPAMAPLISVVL 292

Query: 487 STLLVFLFSLPSQLVLV 537
           +TL+V+L +  S+ V +
Sbjct: 293 ATLIVYLSNAESRGVKI 309



to top

>SUT3_STYHA (P53393) Low affinity sulphate transporter 3|
          Length = 644

 Score = 38.5 bits (88), Expect = 0.015
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +1

Query: 439 KFFWISACAPLASVIVSTLLVFL 507
           KFFW+ A APL SVI+STL+VFL
Sbjct: 267 KFFWLPAIAPLLSVILSTLIVFL 289



to top

>SUT32_ARATH (O04289) Sulfate transporter 3.2 (AST77)|
          Length = 646

 Score = 38.1 bits (87), Expect = 0.020
 Identities = 24/65 (36%), Positives = 33/65 (50%)
 Frame = +1

Query: 394 LTFCVHVYVQSMRWPKFFWISACAPLASVIVSTLLVFLFSLPSQLVLVNPTGEVMEKIQR 573
           L F +     S + PK FWISA +PL SVI  T  +FL+ L  Q   +   GE+ + I  
Sbjct: 246 LIFLLTTKYISKKRPKLFWISAMSPLVSVIFGT--IFLYFLHDQFHGIQFIGELKKGINP 303

Query: 574 ANDAH 588
            +  H
Sbjct: 304 PSITH 308



to top

>SUT1_STYHA (P53391) High affinity sulphate transporter 1|
          Length = 667

 Score = 38.1 bits (87), Expect = 0.020
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
 Frame = +1

Query: 361 HGWLVYAETIRLTFCVHVYVQ---SMRWPKFFWISACAPLASVIVSTLLVFL 507
           HGW      I L+F + + +    + +  K FW+SA +P+ SVIVST  V++
Sbjct: 265 HGWNWETILIGLSFLIFLLITKYIAKKNKKLFWVSAISPMISVIVSTFFVYI 316



to top

>SUT12_ARATH (Q9MAX3) Sulfate transporter 1.2|
          Length = 653

 Score = 37.7 bits (86), Expect = 0.026
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
 Frame = +1

Query: 361 HGW---LVYAETIRLTFCVHVYVQSMRWPKFFWISACAPLASVIVSTLLVFLFSLPSQLV 531
           HGW    +      LTF +   +   +  K FW+ A APL SVIVST  V++     Q V
Sbjct: 250 HGWNWQTILIGASFLTFLLTSKIIGKKSKKLFWVPAIAPLISVIVSTFFVYITRADKQGV 309

Query: 532 LV 537
            +
Sbjct: 310 QI 311



to top

>SUT21_ARATH (O04722) Sulfate transporter 2.1 (AST68)|
          Length = 677

 Score = 37.4 bits (85), Expect = 0.034
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = +1

Query: 394 LTFCVHVYVQSMRWPKFFWISACAPLASVIVSTLLVFL 507
           L+F +       ++ K FW+ A APL +V+VSTL+VFL
Sbjct: 289 LSFILITRFIGKKYKKLFWLPAIAPLIAVVVSTLMVFL 326



to top

>SUT2_STYHA (P53392) High affinity sulphate transporter 2|
          Length = 662

 Score = 36.2 bits (82), Expect = 0.077
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
 Frame = +1

Query: 361 HGWLVYAETIRLTFCVHVYVQ---SMRWPKFFWISACAPLASVIVSTLLVFL 507
           HGW      I L+F + + +    + +  K FW+SA +P+  VIVST  V++
Sbjct: 260 HGWNWETILIGLSFLIFLLITKYIAKKNKKLFWVSAISPMICVIVSTFFVYI 311



to top

>SUT35_ARATH (Q94LW6) Probable sulfate transporter 3.5|
          Length = 634

 Score = 34.7 bits (78), Expect = 0.22
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
 Frame = +1

Query: 403 CVHVYVQS-----MRWPKFFWISACAPLASVIVSTLLVFL 507
           C  V++QS      R+PK FW+SA  P+  V+V  ++ +L
Sbjct: 248 CFLVFLQSTRYIKQRYPKLFWVSAMGPMVVVVVGCVVAYL 287



to top

>ATPF_MYCGE (P47643) ATP synthase B chain precursor (EC 3.6.3.14)|
          Length = 208

 Score = 33.1 bits (74), Expect = 0.65
 Identities = 18/52 (34%), Positives = 28/52 (53%)
 Frame = +1

Query: 445 FWISACAPLASVIVSTLLVFLFSLPSQLVLVNPTGEVMEKIQRANDAHNHFR 600
           FW+     LA  I+ TL++FLF  P+Q  L N    +  +I++AN+     R
Sbjct: 48  FWVFITHLLAFFILLTLMIFLFWKPTQRFLNNRKNLLEAQIKQANELEKQAR 99



to top

>FENR_ANAVT (Q44549) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)|
          Length = 440

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -2

Query: 542 GFTSTSCEGREKRKTSSVDTMTDAKGAHAEIQKN 441
           GF     E + K+K +  +TMT AK  HA++  N
Sbjct: 117 GFAKPPAEEQLKKKDNKGNTMTQAKAKHADVPVN 150



to top

>FENR_ANASP (P58558) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)|
          Length = 440

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -2

Query: 542 GFTSTSCEGREKRKTSSVDTMTDAKGAHAEIQKN 441
           GF     E + K+K +  +TMT AK  HA++  N
Sbjct: 117 GFAKPPAEEQLKKKDNKGNTMTQAKAKHADVPVN 150


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,492,838
Number of Sequences: 219361
Number of extensions: 1804460
Number of successful extensions: 4839
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4837
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5424720305
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top