Clone Name | rbasd21n07 |
---|---|
Clone Library Name | barley_pub |
>emb|X68655.1|HVCW18 H.vulgare Cw-18 mRNA Length = 732 Score = 470 bits (237), Expect = e-129 Identities = 243/245 (99%) Strand = Plus / Minus Query: 92 ttaaccaaatagagctagattaatttataatccatataccataagtgcccatggtacaac 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 725 ttaaccaaatagagctagattaatttataatccatataccataagtgcccatggtacaac 666 Query: 152 gtacagcaaactcccgtatgtgtctcctcaaagggagtgaacaaacaatcaaacactgat 211 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 665 gtacagcaaactcccgtatgtgtctcctcaaagggagtgaacaaacaatcaaacactgat 606 Query: 212 acaaaaccgatacaacagtgagcggccatgtagagctggctcagcgtacgtcctcccctc 271 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 605 acaaaaccgatacaacagtgagcggccatgtagagctggctcagcgtacgtcctcccctc 546 Query: 272 tctctctcatggagatcataacagaggatttattcatgtatatgtatatatgtgtatgtg 331 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 545 tctctcccatggagatcataacagaggatttattcatgtatatgtatatatgcgtatgtg 486 Query: 332 acctc 336 ||||| Sbjct: 485 acctc 481
>emb|X56547.1|HSBLT4 H. vulgare BLT4 mRNA Length = 724 Score = 470 bits (237), Expect = e-129 Identities = 244/245 (99%), Gaps = 1/245 (0%) Strand = Plus / Minus Query: 92 ttaaccaaatagagctagattaatttataatccatataccataagtgcccatggtacaac 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 709 ttaaccaaatagagctagattaatttataatccatataccataagtgcccatggtacaac 650 Query: 152 gtacagcaaactcccgtatgtgtctcctcaaagggagtgaacaaacaatcaaacactgat 211 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 649 gtacagcaaactcccgtatgtgtctcctcaaagggagtgaacaaacaatcaaacactgat 590 Query: 212 acaaaaccgatacaacagtgagcggccatgtagagctggctcagcgtacgtcctcccctc 271 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 589 acaaaaccgatacaacagtgagcggccatgtagagctggctcagcgtacgtcct-ccctc 531 Query: 272 tctctctcatggagatcataacagaggatttattcatgtatatgtatatatgtgtatgtg 331 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 530 tctctctcatggagatcataacagaggatttattcatgtatatgtatatatgtgtatgtg 471 Query: 332 acctc 336 ||||| Sbjct: 470 acctc 466
>emb|Z37114.1|HVLTPPA H.vulgare (clone pKG2316) mRNA for lipid transfer protein precursor Length = 627 Score = 398 bits (201), Expect = e-108 Identities = 210/213 (98%) Strand = Plus / Minus Query: 124 catataccataagtgcccatggtacaacgtacagcaaactcccgtatgtgtctcctcaaa 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 622 catataccataagtgcccatggtacaacgtacagcaaactcccgtatgtgtctccttaaa 563 Query: 184 gggagtgaacaaacaatcaaacactgatacaaaaccgatacaacagtgagcggccatgta 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 562 gggagtgaacaaacaatcaaacactgatacaaaaccgatacaacagtgagcggccatgta 503 Query: 244 gagctggctcagcgtacgtcctcccctctctctctcatggagatcataacagaggattta 303 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 502 gagctggctcagcgtacgtcctcccctctctctcccatggagatcataacagaggattta 443 Query: 304 ttcatgtatatgtatatatgtgtatgtgacctc 336 |||||||||||||||||||| |||||||||||| Sbjct: 442 ttcatgtatatgtatatatgcgtatgtgacctc 410
>gb|AF302788.1|AF302788 Triticum aestivum lipid transfer protein precursor (LTP1) mRNA, complete cds Length = 737 Score = 168 bits (85), Expect = 7e-39 Identities = 190/224 (84%), Gaps = 12/224 (5%) Strand = Plus / Minus Query: 99 aatagagctagattaatttataatccatataccataagtgcccatggtacaacgtacagc 158 |||||||||||||||||||||||| ||||| ||||| |||||||||| ||||| | Sbjct: 709 aatagagctagattaatttataat------accatgagtgcacatggtacaaagtacaac 656 Query: 159 aaactcccgtatgtgtctcctcaaagggagtgaacaaacaatcaaacactgatacaaaac 218 |||||||||| | || |||||||||||||||| ||||||||||| ||||||||||| Sbjct: 655 aaactcccgtctctg----ctcaaagggagtgaacgaacaatcaaacgctgatacaaaat 600 Query: 219 cgatacaacagtgagcggccatgtagagctggctcagcgtacgtcctcccctctctctct 278 |||||||||||| |||| ||| ||||||||||| ||||||| || ||| |||||| Sbjct: 599 agatacaacagtggccggctatgcagagctggctcgacgtacgtact--cctgtctctca 542 Query: 279 catggagatcataacagaggatttattcatgtatatgtatatat 322 ||||||||||||| ||||| |||||||||||||||||| ||||| Sbjct: 541 catggagatcatatcagagcatttattcatgtatatgtgtatat 498
>gb|AF334185.1|AF334185 Triticum aestivum lipid transfer protein precursor (LTP2) mRNA, complete cds Length = 730 Score = 141 bits (71), Expect = 2e-30 Identities = 191/227 (84%), Gaps = 8/227 (3%) Strand = Plus / Minus Query: 107 tagattaatttataatccatataccataagtgcccatggtacaacgtacagcaaactccc 166 |||||||||||||||||| |||| ||||| | ||| |||||| ||||| ||||||||| Sbjct: 712 tagattaatttataatcc-tatatgataagcgtacatcgtacaaagtacaacaaactccc 654 Query: 167 gtatgtgtctc-ctcaaagggagtgaacaaacaatcaaacactgatacaaaaccgataca 225 || |||| |||||||||||||||| ||||||||||| ||||||||||| |||||| Sbjct: 653 gt----gtctagctcaaagggagtgaacgaacaatcaaacgctgatacaaaatagataca 598 Query: 226 acagtgagcggccatgtagagctggctcagcgtacgtcctcccctctctctctcatggag 285 |||||| | || ||| | ||||||||| |||||| |||| | |||||| ||||||| Sbjct: 597 acagtggccagctatgcaaagctggctcgatgtacgtactcc--tatctctcacatggag 540 Query: 286 atcataacagaggatttattcatgtatatgtatatatgtgtatgtga 332 |||||| ||||| |||||||||||||||||||||||||||| ||||| Sbjct: 539 atcatatcagagcatttattcatgtatatgtatatatgtgtgtgtga 493
>gb|AY566607.1| Triticum aestivum lipid transfer protein (LPT1) gene, complete cds Length = 3448 Score = 139 bits (70), Expect = 6e-30 Identities = 127/145 (87%), Gaps = 2/145 (1%) Strand = Plus / Minus Query: 178 ctcaaagggagtgaacaaacaatcaaacactgatacaaaaccgatacaacagtgagcggc 237 |||||||||||||||| ||||||||||| ||||||||||| |||||||||||| |||| Sbjct: 3436 ctcaaagggagtgaacgaacaatcaaacgctgatacaaaatagatacaacagtggccggc 3377 Query: 238 catgtagagctggctcagcgtacgtcctcccctctctctctcatggagatcataacagag 297 ||| ||||||||||| ||||||| || ||| |||||| ||||||||||||| ||||| Sbjct: 3376 tatgcagagctggctcgacgtacgtact--cctgtctctcacatggagatcatatcagag 3319 Query: 298 gatttattcatgtatatgtatatat 322 |||||||||||||||||| ||||| Sbjct: 3318 catttattcatgtatatgtgtatat 3294
>emb|AJ852557.1| Triticum aestivum ltp9.5b gene for type 1 non specific lipid transfer protein precursor Length = 496 Score = 89.7 bits (45), Expect = 5e-15 Identities = 57/61 (93%) Strand = Plus / Minus Query: 272 tctctctcatggagatcataacagaggatttattcatgtatatgtatatatgtgtatgtg 331 |||||| ||||||||||||| ||||| |||||||||||||||||||||||||||| |||| Sbjct: 494 tctctcacatggagatcatatcagagcatttattcatgtatatgtatatatgtgtgtgtg 435 Query: 332 a 332 | Sbjct: 434 a 434
>emb|Z66528.1|HVGLTP4X3 H.vulgare ltp4.3 gene Length = 1862 Score = 58.0 bits (29), Expect = 2e-05 Identities = 54/61 (88%), Gaps = 1/61 (1%) Strand = Plus / Minus Query: 219 cgatacaacagtgagc-ggccatgtagagctggctcagcgtacgtcctcccctctctctc 277 ||||||||||||| || ||||||| |||||||||||| ||||||| || | ||||||||| Sbjct: 1580 cgatacaacagtgtgccggccatgcagagctggctcaacgtacgtacttctctctctctc 1521 Query: 278 t 278 | Sbjct: 1520 t 1520
>dbj|AK095100.1| Homo sapiens cDNA FLJ37781 fis, clone BRHIP2027054 Length = 2772 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 302 tattcatgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||||||||| Sbjct: 1813 tattcatgtatatgtatatatgtgtatgt 1841
>gb|AC092834.3| Homo sapiens BAC clone RP13-497K6 from 4, complete sequence Length = 146708 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 302 tattcatgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||||||||| Sbjct: 102462 tattcatgtatatgtatatatgtgtatgt 102434
>emb|AL611944.10| Mouse DNA sequence from clone RP23-279E14 on chromosome 13 Contains the gene for the ortholog of rat and human ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 UQCRFS1, a novel gene and a CpG island, complete sequence Length = 194065 Score = 56.0 bits (28), Expect = 7e-05 Identities = 31/32 (96%) Strand = Plus / Minus Query: 300 tttattcatgtatatgtatatatgtgtatgtg 331 ||||| |||||||||||||||||||||||||| Sbjct: 16788 tttatacatgtatatgtatatatgtgtatgtg 16757
>gb|AC147480.13| Mus musculus chromosome 14, clone RP23-429N24, complete sequence Length = 210000 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 297 ggatttattcatgtatatgtatatatgtgtatgtg 331 |||||||||||| ||||||||||||| |||||||| Sbjct: 64237 ggatttattcatatatatgtatatatatgtatgtg 64203
>gb|AC154527.2| Mus musculus BAC clone RP23-221K13 from chromosome 14, complete sequence Length = 215802 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 297 ggatttattcatgtatatgtatatatgtgtatgtg 331 |||||||||||| ||||||||||||| |||||||| Sbjct: 21318 ggatttattcatatatatgtatatatatgtatgtg 21352
>gb|AC165092.3| Mus musculus BAC clone RP23-10M2 from chromosome 14, complete sequence Length = 215949 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 297 ggatttattcatgtatatgtatatatgtgtatgtg 331 |||||||||||| ||||||||||||| |||||||| Sbjct: 77667 ggatttattcatatatatgtatatatatgtatgtg 77633
>gb|AC147771.1| Homo sapiens chromosome 16 clone PCR-16A03, complete sequence Length = 8715 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgtgac 333 ||||||||||||||||||||||||||| Sbjct: 307 atgtatatgtatatatgtgtatgtgac 333
>gb|AC140912.2| Homo sapiens chromosome 16 clone XXfos-88206B9, complete sequence Length = 41928 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgtgac 333 ||||||||||||||||||||||||||| Sbjct: 695 atgtatatgtatatatgtgtatgtgac 669
>gb|AC102004.7| Mus musculus chromosome 15, clone RP24-489M6, complete sequence Length = 164810 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 306 catgtatatgtatatatgtgtatgtg 331 |||||||||||||||||||||||||| Sbjct: 56897 catgtatatgtatatatgtgtatgtg 56872
>emb|AL645606.22| Mouse DNA sequence from clone RP23-374K2 on chromosome 1, complete sequence Length = 193458 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgtga 332 |||||||||||||||||||||||||| Sbjct: 132694 atgtatatgtatatatgtgtatgtga 132669
>gb|AC157773.6| Mus musculus chromosome 8, clone RP24-161L20, complete sequence Length = 179186 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgtga 332 |||||||||||||||||||||||||| Sbjct: 87965 atgtatatgtatatatgtgtatgtga 87940
>gb|AC121131.14| Mus musculus chromosome 8, clone RP23-187D7, complete sequence Length = 188634 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgtga 332 |||||||||||||||||||||||||| Sbjct: 170549 atgtatatgtatatatgtgtatgtga 170524
>gb|AC124427.5| Mus musculus BAC clone RP24-232N5 from chromosome 8, complete sequence Length = 205525 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 306 catgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||||| Sbjct: 127482 catgtatatgtatatatgtgtatgt 127506
>gb|AC102481.10| Mus musculus chromosome 1, clone RP24-427A3, complete sequence Length = 145973 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 306 catgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||||| Sbjct: 27917 catgtatatgtatatatgtgtatgt 27893
>gb|AC110509.21| Mus musculus chromosome 8, clone RP24-423G4, complete sequence Length = 190160 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 306 catgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||||| Sbjct: 46521 catgtatatgtatatatgtgtatgt 46497
>gb|AC157569.12| Mus musculus chromosome 3, clone RP23-434M21, complete sequence Length = 205286 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 306 catgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||||| Sbjct: 182864 catgtatatgtatatatgtgtatgt 182840 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 306 catgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||||| Sbjct: 182634 catgtatatgtatatatgtgtatgt 182658
>gb|AC130281.13| Mus musculus chromosome 3, clone RP23-372I17, complete sequence Length = 216261 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 306 catgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||||| Sbjct: 76796 catgtatatgtatatatgtgtatgt 76820
>ref|NG_005550.2| Homo sapiens neuroblastoma breakpoint family, member 17 (pseudogene) (NBPF17P) on chromosome 1 Length = 64687 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||||| Sbjct: 6510 atgtatatgtatatatgtgtatgtg 6486
>gb|AC090046.10| Mus musculus chromosome 6, clone RP23-82P24, complete sequence Length = 179099 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||||| Sbjct: 11678 atgtatatgtatatatgtgtatgtg 11654 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||||| Sbjct: 11626 atgtatatgtatatatgtgtatgtg 11602 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 11534 atgtatatgtatatatgtgtatgt 11511
>gb|AC147082.2| Mus musculus BAC clone RP23-321E5 from chromosome 9, complete sequence Length = 202957 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||||| Sbjct: 118437 atgtatatgtatatatgtgtatgtg 118413 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtat 328 ||||||||||||||||||||| Sbjct: 118377 tgtatatgtatatatgtgtat 118397
>gb|AC164600.5| Mus musculus chromosome 1, clone RP23-366M5, complete sequence Length = 191581 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 306 catgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||||| Sbjct: 35127 catgtatatgtatatatgtgtatgt 35151
>gb|AC121279.7| Mus musculus chromosome 3, clone RP23-4F17, complete sequence Length = 207763 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 306 catgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||||| Sbjct: 176578 catgtatatgtatatatgtgtatgt 176554 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 306 catgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||||| Sbjct: 176348 catgtatatgtatatatgtgtatgt 176372
>gb|AC113094.16| Mus musculus chromosome 10, clone RP23-311O24, complete sequence Length = 195634 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||||| Sbjct: 88873 atgtatatgtatatatgtgtatgtg 88897
>gb|AC121977.3| Mus musculus BAC clone RP24-287A16 from chromosome 6, complete sequence Length = 186279 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||||| Sbjct: 84548 atgtatatgtatatatgtgtatgtg 84572 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||||| Sbjct: 84496 atgtatatgtatatatgtgtatgtg 84520 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 84640 atgtatatgtatatatgtgtatgt 84663
>emb|AJ784903.1| Triticum turgidum subsp. durum partial mRNA for type 1 non-specific lipid transfer protein precursor (ltp9.2 gene) Length = 604 Score = 50.1 bits (25), Expect = 0.005 Identities = 40/45 (88%) Strand = Plus / Minus Query: 120 aatccatataccataagtgcccatggtacaacgtacagcaaactc 164 |||||||||| || |||| | |||||||||| ||||||||||||| Sbjct: 581 aatccatatatcaaaagtacacatggtacaaagtacagcaaactc 537
>emb|AJ784901.1| Triticum aestivum mRNA for type 1 non-specific lipid transfer protein precursor (ltp9.2 gene) Length = 708 Score = 50.1 bits (25), Expect = 0.005 Identities = 40/45 (88%) Strand = Plus / Minus Query: 120 aatccatataccataagtgcccatggtacaacgtacagcaaactc 164 |||||||||| || |||| | |||||||||| ||||||||||||| Sbjct: 684 aatccatatatcaaaagtacacatggtacaaagtacagcaaactc 640
>gb|AC117219.2| Mus musculus BAC clone RP23-344D18 from chromosome 9, complete sequence Length = 216199 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||||| Sbjct: 201300 atgtatatgtatatatgtgtatgtg 201276 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtat 328 ||||||||||||||||||||| Sbjct: 201240 tgtatatgtatatatgtgtat 201260
>gb|AC124403.3| Mus musculus BAC clone RP24-369I6 from chromosome 16, complete sequence Length = 159138 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||||| Sbjct: 65833 atgtatatgtatatatgtgtatgtg 65809
>gb|AC123809.3| Mus musculus BAC clone RP24-174M12 from chromosome 10, complete sequence Length = 157123 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||||| Sbjct: 149930 atgtatatgtatatatgtgtatgtg 149906
>gb|AC125410.4| Mus musculus BAC clone RP23-146N3 from 3, complete sequence Length = 213701 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 304 ttcatgtatatgtatatatgtgtat 328 ||||||||||||||||||||||||| Sbjct: 139045 ttcatgtatatgtatatatgtgtat 139069
>gb|AC117193.3| Mus musculus BAC clone RP23-88I6 from 10, complete sequence Length = 136958 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||||| Sbjct: 30952 atgtatatgtatatatgtgtatgtg 30928
>emb|AL732363.8| Human DNA sequence from clone RP11-744H18 on chromosome 1 Contains a phosphodiesterase 4D interacting protein (myomegalin) (PDE4DIP) pseudogene and the 3' end of a novel pseudogene, complete sequence Length = 106538 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||||| Sbjct: 79249 atgtatatgtatatatgtgtatgtg 79273
>gb|AC164626.6| Mus musculus 6 BAC RP23-472D18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190308 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||||| Sbjct: 94919 atgtatatgtatatatgtgtatgtg 94895 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||||| Sbjct: 94867 atgtatatgtatatatgtgtatgtg 94843 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 94775 atgtatatgtatatatgtgtatgt 94752
>emb|AL606496.12| Mouse DNA sequence from clone RP23-451K23 on chromosome 13 Contains a ribosomal protein S9 (Rps9) pseudogene and a high mobility group box 1 (Hmgb1) pseudogene, complete sequence Length = 214870 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||||| Sbjct: 211112 atgtatatgtatatatgtgtatgtg 211136
>gb|AC103602.12| Mus musculus chromosome 1, clone RP24-234P21, complete sequence Length = 158510 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||||| Sbjct: 135695 atgtatatgtatatatgtgtatgtg 135671
>gb|AC102477.18| Mus musculus chromosome 5, clone RP24-405C17, complete sequence Length = 179495 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||||| Sbjct: 162454 atgtatatgtatatatgtgtatgtg 162430
>dbj|AK016245.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930568A13 product:unclassifiable, full insert sequence Length = 1062 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||||| Sbjct: 979 atgtatatgtatatatgtgtatgtg 955
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||||| Sbjct: 32385353 atgtatatgtatatatgtgtatgtg 32385377 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 32385441 atgtatatgtatatatgtgtatgt 32385464 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgtg 331 |||||||| |||||||||||||||| Sbjct: 22202770 atgtatatatatatatgtgtatgtg 22202794 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 255 gcgtacgtcctcccctctctctctc 279 |||| |||||||||||||||||||| Sbjct: 21224967 gcgtgcgtcctcccctctctctctc 21224943 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||| ||||| Sbjct: 30560761 atgtatatgtatatatgtatatgt 30560738 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||| ||||||| Sbjct: 30560569 atgtatatgtatatatatgtatgt 30560546 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||| ||||| Sbjct: 26124501 atgtatatgtatatatgtatatgt 26124478 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||| ||||| Sbjct: 26124487 atgtatatgtatatatgtatatgt 26124464 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||| ||||| Sbjct: 26124467 atgtatatgtatatatgtatatgt 26124444 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||| ||||| Sbjct: 25296465 atgtatatgtatatatgtatatgt 25296442 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgtg 331 ||||||||||||||||| |||||| Sbjct: 23365475 tgtatatgtatatatgtatatgtg 23365498 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgtg 331 ||||||||||||||||| |||||| Sbjct: 23365265 tgtatatgtatatatgtatatgtg 23365288 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||| ||||| Sbjct: 18406193 atgtatatgtatatatgtatatgt 18406216 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||| ||||| Sbjct: 18406179 atgtatatgtatatatgtatatgt 18406202 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||| ||||| Sbjct: 18406165 atgtatatgtatatatgtatatgt 18406188 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||| ||||| Sbjct: 14959105 atgtatatgtatatatgtatatgt 14959082 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||| ||||| Sbjct: 7821220 atgtatatgtatatatgtatatgt 7821197 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||| ||||||||||| Sbjct: 7820916 atgtatatgtatgtatgtgtatgt 7820893 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||| ||||| Sbjct: 5366306 atgtatatgtatatatgtatatgt 5366283 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||| ||||||| Sbjct: 5192449 atgtatatgtatatatatgtatgt 5192426 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||| ||||| Sbjct: 5192429 atgtatatgtatatatgtatatgt 5192406 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||| ||||| Sbjct: 5192399 atgtatatgtatatatgtatatgt 5192376
>gb|AC157770.4| Mus musculus chromosome 1, clone RP24-159C20, complete sequence Length = 133072 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||||| Sbjct: 36677 atgtatatgtatatatgtgtatgtg 36653
>dbj|AP003371.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1143G03 Length = 137770 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||||| Sbjct: 64850 atgtatatgtatatatgtgtatgtg 64874 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 64938 atgtatatgtatatatgtgtatgt 64961
>gb|AC006370.2|AC006370 Homo sapiens BAC clone RP11-292P9 from Y, complete sequence Length = 173146 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||||| Sbjct: 36131 atgtatatgtatatatgtgtatgtg 36155
>gb|AC171917.14| Mus musculus chromosome 8, clone RP23-390K13, complete sequence Length = 217234 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||||| Sbjct: 43895 atgtatatgtatatatgtgtatgtg 43871
>dbj|AP001687.1| Homo sapiens genomic DNA, chromosome 21q, section 31/105 Length = 340000 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||||| Sbjct: 71901 atgtatatgtatatatgtgtatgtg 71925
>gb|AC102452.7| Mus musculus chromosome 5, clone RP24-272L20, complete sequence Length = 183858 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||||| Sbjct: 170120 atgtatatgtatatatgtgtatgtg 170144
>emb|AL929277.9| Mouse DNA sequence from clone RP23-153J22 on chromosome 4, complete sequence Length = 144310 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||||| Sbjct: 70126 atgtatatgtatatatgtgtatgtg 70102
>emb|AL845286.8| Mouse DNA sequence from clone RP23-328F20 on chromosome 2, complete sequence Length = 195593 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||||| Sbjct: 24618 atgtatatgtatatatgtgtatgtg 24642
>dbj|AP001253.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B658E16, LL56-APP region, complete sequence Length = 140249 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||||| Sbjct: 100706 atgtatatgtatatatgtgtatgtg 100730
>gb|AC153494.25| Mus musculus 10 BAC RP23-345J24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 231991 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgtg 331 |||||||||||||||||||||||| Sbjct: 129057 tgtatatgtatatatgtgtatgtg 129034
>gb|AY019542.1| Oryza sativa microsatellite MRG1867 containing (AT)X37, closest to marker C393A, genomic sequence Length = 274 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 46 atgtatatgtatatatgtgtatgt 23
>gb|AC115932.11| Mus musculus chromosome 1, clone RP24-538F21, complete sequence Length = 205378 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 162393 atgtatatgtatatatgtgtatgt 162370
>gb|AC114984.18| Mus musculus chromosome 18, clone RP23-248F9, complete sequence Length = 185563 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgtg 331 |||||||||||||||||||||||| Sbjct: 134733 tgtatatgtatatatgtgtatgtg 134756
>gb|AC102064.8| Mus musculus chromosome 5, clone RP23-237N4, complete sequence Length = 152470 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 90885 atgtatatgtatatatgtgtatgt 90862 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||| ||||||||||||||||||| Sbjct: 90871 atgtgtatgtatatatgtgtatgt 90848
>gb|AC122941.3| Mus musculus BAC clone RP23-1E3 from chromosome 8, complete sequence Length = 244220 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 114083 atgtatatgtatatatgtgtatgt 114106
>gb|AC121267.17| Mus musculus chromosome 19, clone RP24-444E1, complete sequence Length = 160720 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgtg 331 |||||||||||||||||||||||| Sbjct: 27421 tgtatatgtatatatgtgtatgtg 27398
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 33037576 atgtatatgtatatatgtgtatgt 33037553 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 22026749 atgtatatgtatatatgtgtat 22026728 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgtg 331 |||||||||||||||||| |||||| Sbjct: 33037548 atgtatatgtatatatgtatatgtg 33037524 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgt 326 |||||||||||||||||||| Sbjct: 35591297 atgtatatgtatatatgtgt 35591316 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||| ||||| Sbjct: 26779002 atgtatatgtatatatgtatatgt 26779025 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgt 326 |||||||||||||||||||| Sbjct: 22026964 atgtatatgtatatatgtgt 22026983 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 atgtatatatgtgtatgtga 332 |||||||||||||||||||| Sbjct: 15614591 atgtatatatgtgtatgtga 15614610
>gb|AC166263.9| Mus musculus BAC RP23-145L7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 191221 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgtg 331 |||||||||||||||||||||||| Sbjct: 173381 tgtatatgtatatatgtgtatgtg 173404 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 173359 atgtatatgtatatatgtgtatgt 173336
>gb|AC142448.3| Mus musculus BAC clone RP24-540M5 from chromosome 18, complete sequence Length = 170302 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgtg 331 |||||||||||||||||||||||| Sbjct: 147560 tgtatatgtatatatgtgtatgtg 147583
>emb|CT025598.9| Mouse DNA sequence from clone RP23-218L3 on chromosome 13, complete sequence Length = 228266 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 168593 atgtatatgtatatatgtgtatgt 168570 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 168555 atgtatatgtatatatgtgtatgt 168532 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||| ||||| Sbjct: 168607 atgtatatgtatatatgtatatgt 168584 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 atatgtatatatgtgtatgt 330 |||||||||||||||||||| Sbjct: 168513 atatgtatatatgtgtatgt 168494
>gb|AC132357.3| Mus musculus BAC clone RP24-120G2 from chromosome 18, complete sequence Length = 189088 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgtg 331 |||||||||||||||||||||||| Sbjct: 25593 tgtatatgtatatatgtgtatgtg 25570
>gb|AC122460.4| Mus musculus BAC clone RP24-283I1 from chromosome 19, complete sequence Length = 173119 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 152799 atgtatatgtatatatgtgtatgt 152822
>gb|AC122511.5| Mus musculus BAC clone RP24-446A8 from chromosome 6, complete sequence Length = 157847 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 63858 atgtatatgtatatatgtgtatgt 63881
>gb|AC135362.3| Mus musculus BAC clone RP23-286J13 from chromosome 8, complete sequence Length = 173357 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 139390 atgtatatgtatatatgtgtatgt 139367
>gb|AC083948.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-67P7, complete sequence Length = 214125 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgtg 331 |||||||||||||||||||||||| Sbjct: 189124 tgtatatgtatatatgtgtatgtg 189101
>gb|AC084162.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-11P12, complete sequence Length = 159180 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgtg 331 |||||||||||||||||||||||| Sbjct: 4934 tgtatatgtatatatgtgtatgtg 4911
>gb|AC133157.1| Mus musculus BAC clone RP24-472D8 from 2, complete sequence Length = 172460 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgtg 331 |||||||||||||||||||||||| Sbjct: 146125 tgtatatgtatatatgtgtatgtg 146148
>gb|AC107783.10| Mus musculus chromosome 1, clone RP23-38G5, complete sequence Length = 178062 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 26696 atgtatatgtatatatgtgtatgt 26719
>emb|AL031584.2|HS1158E12 Human DNA sequence from clone RP5-1158E12 on chromosome Xp11.23-11.4 Contains a pseudogene similar to part of splicing factor, arginine/serine-rich 6 (B52, SRP55) (SFRS6), two novel genes and a CpG island, complete sequence Length = 163871 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 145671 atgtatatgtatatatgtgtatgt 145694
>emb|BX883043.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 2/11 Length = 347664 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgtg 331 |||||||||||||||||||||||| Sbjct: 241093 tgtatatgtatatatgtgtatgtg 241116
>emb|BX571665.6| Zebrafish DNA sequence from clone CH211-276E8 in linkage group 20 Contains the 5' end of the gene for a novel protein similar to vertebrate ring finger protein 144 (RNF144), the gene for a novel radical SAM superfamily protein, the gene for a novel protein similar to mouse thymidylate kinase family LPS-inducible member (Tyki) and a CpG island, complete sequence Length = 166885 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 24817 atgtatatgtatatatgtgtatgt 24794
>gb|AC160132.2| Mus musculus BAC clone RP23-197I12 from chromosome 9, complete sequence Length = 202786 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 27463 atgtatatgtatatatgtgtatgt 27486
>emb|BX571727.8| Zebrafish DNA sequence from clone DKEY-14I22 in linkage group 5, complete sequence Length = 102670 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 41946 atgtatatgtatatatgtgtatgt 41969 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgt 326 |||||||||||||||||||| Sbjct: 42042 atgtatatgtatatatgtgt 42061
>gb|AC012413.10| Homo sapiens chromosome 8, clone RP11-401H2, complete sequence Length = 171226 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgtg 331 |||||||||||||||||||||||| Sbjct: 111368 tgtatatgtatatatgtgtatgtg 111345 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 111261 tgtatatgtatatatgtgtatgt 111239 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||| |||| Sbjct: 111443 tgtatatgtatatatgtgtgtgtg 111420
>gb|AC161867.6| Mus musculus chromosome 8, clone RP24-281E22, complete sequence Length = 180410 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgtg 331 |||||||||||||||||||||||| Sbjct: 141928 tgtatatgtatatatgtgtatgtg 141905 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgtg 331 |||||||||||||||||||||||| Sbjct: 141852 tgtatatgtatatatgtgtatgtg 141829
>emb|BX005174.12| Zebrafish DNA sequence from clone CH211-134M17 in linkage group 13, complete sequence Length = 178371 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgtg 331 |||||||||||||||||||||||| Sbjct: 34117 tgtatatgtatatatgtgtatgtg 34140
>gb|AC018951.8|AC018951 Homo sapiens chromosome 11, clone RP11-307P14, complete sequence Length = 194547 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 81484 atgtatatgtatatatgtgtatgt 81461
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 33128086 atgtatatgtatatatgtgtatgt 33128063 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 22019778 atgtatatgtatatatgtgtat 22019757 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgtg 331 |||||||||||||||||| |||||| Sbjct: 33128058 atgtatatgtatatatgtatatgtg 33128034 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgt 326 |||||||||||||||||||| Sbjct: 35681369 atgtatatgtatatatgtgt 35681388 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||| ||||| Sbjct: 26870325 atgtatatgtatatatgtatatgt 26870348 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgt 326 |||||||||||||||||||| Sbjct: 22019993 atgtatatgtatatatgtgt 22020012 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 atgtatatatgtgtatgtga 332 |||||||||||||||||||| Sbjct: 15609125 atgtatatatgtgtatgtga 15609144
>gb|AF342999.1|AF342999 Mus musculus axonemal dynein heavy chain 8 Dnahc8 gene, partial cds Length = 150164 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 51923 atgtatatgtatatatgtgtatgt 51900
>gb|AC157586.2| Mus musculus BAC clone RP24-406D13 from chromosome 9, complete sequence Length = 218664 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 113690 atgtatatgtatatatgtgtatgt 113713
>gb|AC113303.16| Mus musculus chromosome 5, clone RP23-431E5, complete sequence Length = 221109 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgtg 331 |||||||||||||||||||||||| Sbjct: 28073 tgtatatgtatatatgtgtatgtg 28050 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtat 328 ||||||||||||||||||||| Sbjct: 27874 tgtatatgtatatatgtgtat 27854 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgtg 331 ||||||||||||||||| |||||| Sbjct: 27968 tgtatatgtatatatgtatatgtg 27945
>gb|AC092646.2| Homo sapiens BAC clone RP11-415D20 from 2, complete sequence Length = 176982 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgtg 331 |||||||||||||||||||||||| Sbjct: 20560 tgtatatgtatatatgtgtatgtg 20583
>gb|AC084043.4|AC084043 Mus musculus 1 BAC RP23-265D16 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 63324 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 56129 atgtatatgtatatatgtgtatgt 56106
>gb|AC139712.1| Homo sapiens BAC clone RP11-754G3 from 2, complete sequence Length = 180898 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgtg 331 |||||||||||||||||||||||| Sbjct: 51014 tgtatatgtatatatgtgtatgtg 50991
>gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genomic sequence, complete sequence Length = 139823 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 85732 atgtatatgtatatatgtgtatgt 85755 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgtg 331 |||||||||||||||||| |||||| Sbjct: 85760 atgtatatgtatatatgtatatgtg 85784
>gb|AC175538.1| Mus musculus BAC clone RP24-476A4 from chromosome 13, complete sequence Length = 191199 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 48597 atgtatatgtatatatgtgtatgt 48574 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 48559 atgtatatgtatatatgtgtatgt 48536 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||| ||||| Sbjct: 48611 atgtatatgtatatatgtatatgt 48588 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 atatgtatatatgtgtatgt 330 |||||||||||||||||||| Sbjct: 48517 atatgtatatatgtgtatgt 48498
>dbj|AP001689.1| Homo sapiens genomic DNA, chromosome 21q, section 33/105 Length = 340000 Score = 48.1 bits (24), Expect = 0.018 Identities = 27/28 (96%) Strand = Plus / Plus Query: 301 ttattcatgtatatgtatatatgtgtat 328 |||| ||||||||||||||||||||||| Sbjct: 182878 ttatacatgtatatgtatatatgtgtat 182905
>gb|AC112967.14| Mus musculus chromosome 19, clone RP24-151O21, complete sequence Length = 167743 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgtg 331 |||||||||||||||||||||||| Sbjct: 125856 tgtatatgtatatatgtgtatgtg 125833
>emb|AL928576.9| Mouse DNA sequence from clone RP23-343C17 on chromosome 2, complete sequence Length = 188169 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 17278 atgtatatgtatatatgtgtatgt 17301
>gb|AC174471.2| Mus musculus BAC clone RP23-360P3 from chromosome 17, complete sequence Length = 218275 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 109441 atgtatatgtatatatgtgtatgt 109418
>gb|AC151413.2| Mus musculus BAC clone RP23-103N6 from 19, complete sequence Length = 230420 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 63145 atgtatatgtatatatgtgtatgt 63168
>gb|AC138368.8| Mus musculus chromosome 8, clone RP23-328F4, complete sequence Length = 204091 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgtg 331 |||||||||||||||||||||||| Sbjct: 148154 tgtatatgtatatatgtgtatgtg 148177 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgtg 331 |||||||||||||||||||||||| Sbjct: 148078 tgtatatgtatatatgtgtatgtg 148101
>gb|AC153500.3| Mus musculus 10 BAC RP23-28O3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188884 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgtg 331 |||||||||||||||||||||||| Sbjct: 58309 tgtatatgtatatatgtgtatgtg 58332 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 58287 atgtatatgtatatatgtgtatgt 58264
>emb|AL928600.8| Mouse DNA sequence from clone RP23-348O19 on chromosome 2, complete sequence Length = 129435 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgtg 331 |||||||||||||||||||||||| Sbjct: 53999 tgtatatgtatatatgtgtatgtg 54022 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||| |||| Sbjct: 54023 tgtatatgtatatatgtgtgtgtg 54046
>gb|AC158559.7| Mus musculus chromosome 1, clone RP24-300L5, complete sequence Length = 169324 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 13667 atgtatatgtatatatgtgtatgt 13644
>gb|AC166166.2| Mus musculus BAC clone RP23-293B18 from chromosome 17, complete sequence Length = 177378 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 140733 atgtatatgtatatatgtgtatgt 140756
>emb|AL671520.6| Mouse DNA sequence from clone RP23-99G21 on chromosome 4, complete sequence Length = 213303 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||||||||| Sbjct: 148437 atgtatatgtatatatgtgtatgt 148460
>emb|AL627087.11| Mouse DNA sequence from clone RP23-243K17 on chromosome 4, complete sequence Length = 179705 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgtg 331 |||||||||||||||||||||||| Sbjct: 136139 tgtatatgtatatatgtgtatgtg 136162 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 310 tatatgtatatatgtgtatgtg 331 |||||||||||||||||||||| Sbjct: 136201 tatatgtatatatgtgtatgtg 136222
>dbj|AP000470.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B15H23, LL56-APP region, complete sequence Length = 151675 Score = 48.1 bits (24), Expect = 0.018 Identities = 27/28 (96%) Strand = Plus / Plus Query: 301 ttattcatgtatatgtatatatgtgtat 328 |||| ||||||||||||||||||||||| Sbjct: 17038 ttatacatgtatatgtatatatgtgtat 17065
>emb|AL772308.4| Mouse DNA sequence from clone RP23-451I21 on chromosome 15, complete sequence Length = 148496 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgtg 331 |||||||||||||||||||||||| Sbjct: 142110 tgtatatgtatatatgtgtatgtg 142087
>gb|AC107710.5| Mus musculus chromosome 19, clone RP23-269K10, complete sequence Length = 188708 Score = 46.1 bits (23), Expect = 0.072 Identities = 26/27 (96%) Strand = Plus / Plus Query: 305 tcatgtatatgtatatatgtgtatgtg 331 |||| |||||||||||||||||||||| Sbjct: 145310 tcatatatatgtatatatgtgtatgtg 145336 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||| ||||| Sbjct: 19747 atgtatatgtatatatgtatatgt 19724
>gb|AC169128.2| Mus musculus BAC clone RP23-306C13 from chromosome 13, complete sequence Length = 185965 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 309 gtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||| Sbjct: 141125 gtatatgtatatatgtgtatgtg 141103
>gb|AC169510.1| Mus musculus BAC clone RP23-121E6 from chromosome 14, complete sequence Length = 214403 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 87025 tgtatatgtatatatgtgtatgt 87003
>gb|AC109257.8| Mus musculus chromosome 7, clone RP23-362F15, complete sequence Length = 158694 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 310 tatatgtatatatgtgtatgtga 332 ||||||||||||||||||||||| Sbjct: 44863 tatatgtatatatgtgtatgtga 44841
>gb|AC147782.8| Mus musculus chromosome 12, clone RP24-284A21, complete sequence Length = 155158 Score = 46.1 bits (23), Expect = 0.072 Identities = 32/35 (91%) Strand = Plus / Plus Query: 297 ggatttattcatgtatatgtatatatgtgtatgtg 331 |||| |||| || |||||||||||||||||||||| Sbjct: 54059 ggatctatttatatatatgtatatatgtgtatgtg 54093
>gb|AC159316.3| Mus musculus BAC clone RP23-93F3 from chromosome 8, complete sequence Length = 240812 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 159448 tgtatatgtatatatgtgtatgt 159470
>gb|AC105324.11| Mus musculus chromosome 15, clone RP24-311E18, complete sequence Length = 171004 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 302 tattcatgtatatgtatatatgt 324 ||||||||||||||||||||||| Sbjct: 12442 tattcatgtatatgtatatatgt 12420
>gb|AC130546.4| Mus musculus BAC clone RP24-303D11 from chromosome 3, complete sequence Length = 171125 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 24569 tgtatatgtatatatgtgtatgt 24591
>gb|AC091324.10| Mus musculus chromosome 7, clone RP23-7G1, complete sequence Length = 225556 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 41927 tgtatatgtatatatgtgtatgt 41905
>gb|AC079871.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-128P4, complete sequence Length = 125209 Score = 46.1 bits (23), Expect = 0.072 Identities = 32/35 (91%) Strand = Plus / Plus Query: 297 ggatttattcatgtatatgtatatatgtgtatgtg 331 |||| ||||||| ||||||||||||| |||||||| Sbjct: 28985 ggatctattcatatatatgtatatatatgtatgtg 29019
>gb|AC109271.10| Mus musculus chromosome 1, clone RP23-353I19, complete sequence Length = 221001 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatg 329 ||||||||||||||||||||||| Sbjct: 124979 atgtatatgtatatatgtgtatg 124957
>gb|AC163995.4| Mus musculus chromosome 5, clone RP24-242C19, complete sequence Length = 177877 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 310 tatatgtatatatgtgtatgtga 332 ||||||||||||||||||||||| Sbjct: 67196 tatatgtatatatgtgtatgtga 67174
>gb|AC125079.3| Mus musculus chromosome 16 clone RP23-480M17, complete sequence Length = 174536 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 111666 tgtatatgtatatatgtgtatgt 111688
>gb|AC123554.3| Mus musculus BAC clone RP23-135A9 from chromosome 13, complete sequence Length = 205869 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 309 gtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||| Sbjct: 165101 gtatatgtatatatgtgtatgtg 165123
>gb|AC131521.5| Rattus norvegicus 2 BAC CH230-275M7 (Children's Hospital Oakland Research Institute) complete sequence Length = 191106 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 92426 tgtatatgtatatatgtgtatgt 92448 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 atatgtatatatgtgtatgtg 331 ||||||||||||||||||||| Sbjct: 88286 atatgtatatatgtgtatgtg 88306
>gb|AC131749.2| Mus musculus BAC clone RP23-26G8 from 9, complete sequence Length = 234280 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 99029 tgtatatgtatatatgtgtatgt 99051
>gb|AC163029.5| Mus musculus chromosome 1, clone RP23-267I23, complete sequence Length = 181761 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 309 gtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||||| Sbjct: 144929 gtatatgtatatatgtgtatgtg 144907
>emb|AL590074.3| Human DNA sequence from clone RP11-252K10 on chromosome Xp11.3-21.1, complete sequence Length = 29573 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 306 catgtatatgtatatatgtgtat 328 ||||||||||||||||||||||| Sbjct: 9646 catgtatatgtatatatgtgtat 9624
>emb|AL451044.7| Human DNA sequence from clone RP11-293K19 on chromosome 1 Contains part of the DOCK7 gene for dedicator of cytokinesis 7, complete sequence Length = 127370 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatg 329 ||||||||||||||||||||||| Sbjct: 25415 atgtatatgtatatatgtgtatg 25393
>emb|AL391828.10| Human DNA sequence from clone RP11-447A22 on chromosome 6 Contains part of the HIVEP1 gene for human immunodeficiency virus type I enhancer binding protein 1, complete sequence Length = 70104 Score = 46.1 bits (23), Expect = 0.072 Identities = 26/27 (96%) Strand = Plus / Minus Query: 305 tcatgtatatgtatatatgtgtatgtg 331 |||||||||||||||||||||| |||| Sbjct: 46314 tcatgtatatgtatatatgtgtgtgtg 46288
>gb|AF395669.1| Homo sapiens AZFb+c deleted patient WHT2943 deletion junction fragment Length = 5097 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 347 tgtatatgtatatatgtgtatgt 325
>emb|AL358942.6| Human DNA sequence from clone RP1-159M24 on chromosome 6 Contains a proliferation-associated 2G4, 38kD (PA2G4) pseudogene, complete sequence Length = 45260 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 311 atatgtatatatgtgtatgtgac 333 ||||||||||||||||||||||| Sbjct: 38087 atatgtatatatgtgtatgtgac 38109
>emb|AL158831.15| Human DNA sequence from clone RP11-564A4 on chromosome 9, complete sequence Length = 162700 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 147669 tgtatatgtatatatgtgtatgt 147647
>emb|AL121882.10|HSJ223D17 Human DNA sequence from clone RP1-223D17 on chromosome Xq13.2-21.1, complete sequence Length = 87791 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 306 catgtatatgtatatatgtgtat 328 ||||||||||||||||||||||| Sbjct: 1490 catgtatatgtatatatgtgtat 1512 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 310 tatatgtatatatgtgtatgtg 331 |||||||||||||||||||||| Sbjct: 50425 tatatgtatatatgtgtatgtg 50446
>gb|AC161196.4| Mus musculus chromosome 15, clone RP23-319G15, complete sequence Length = 177873 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 302 tattcatgtatatgtatatatgt 324 ||||||||||||||||||||||| Sbjct: 165399 tattcatgtatatgtatatatgt 165377
>gb|AC112026.4| Rattus norvegicus 19 BAC CH230-105L11 (Children's Hospital Oakland Research Institute) complete sequence Length = 237539 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 306 catgtatatgtatatatgtgtat 328 ||||||||||||||||||||||| Sbjct: 63002 catgtatatgtatatatgtgtat 62980
>emb|AL022577.1|HS353H6 Human DNA sequence from clone RP3-353H6 on chromosome Xq25-26.2 Contains the 3' end of the SMARCA1 gene for SWI/SNF related, matrix associated, actin dependent regulator of chromatin (subfamily a, member 1) and aribosomal protein S26 (RPS26) pseudogene, complete sequence Length = 147394 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 96680 tgtatatgtatatatgtgtatgt 96702 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 306 catgtatatgtatatatgtgtatgt 330 ||||||||||||||||||| ||||| Sbjct: 96602 catgtatatgtatatatgtatatgt 96626 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgtg 331 |||||||||||||||||| |||||| Sbjct: 96229 atgtatatgtatatatgtatatgtg 96253 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||| ||||||||||||| Sbjct: 96377 atgtatatgtgtatatgtgtatgt 96400 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgtg 331 ||||||||||||||||| |||||| Sbjct: 96350 tgtatatgtatatatgtatatgtg 96373 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgtg 331 ||||||||||||||||| |||||| Sbjct: 96302 tgtatatgtatatatgtatatgtg 96325 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgtg 331 ||||||||||||||||| |||||| Sbjct: 96252 tgtatatgtatatatgtatatgtg 96275 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||| ||||| Sbjct: 96193 atgtatatgtatatatgtatatgt 96216 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||||| ||||| Sbjct: 96031 atgtatatgtatatatgtatatgt 96054
>gb|AC087883.12| Homo sapiens 12q BAC RP11-335M9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161166 Score = 46.1 bits (23), Expect = 0.072 Identities = 29/31 (93%) Strand = Plus / Minus Query: 301 ttattcatgtatatgtatatatgtgtatgtg 331 |||| ||||| |||||||||||||||||||| Sbjct: 5111 ttatacatgtgtatgtatatatgtgtatgtg 5081
>gb|AC154747.2| Mus musculus BAC clone RP23-116N15 from chromosome 13, complete sequence Length = 209567 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 178837 tgtatatgtatatatgtgtatgt 178859
>emb|CR753867.11| Zebrafish DNA sequence from clone DKEY-165I4 in linkage group 5, complete sequence Length = 125222 Score = 46.1 bits (23), Expect = 0.072 Identities = 29/31 (93%) Strand = Plus / Plus Query: 101 tagagctagattaatttataatccatatacc 131 |||||||| || ||||||||||||||||||| Sbjct: 72949 tagagctaaataaatttataatccatatacc 72979
>emb|CR735112.10| Zebrafish DNA sequence from clone CH211-222C11 in linkage group 5, complete sequence Length = 156543 Score = 46.1 bits (23), Expect = 0.072 Identities = 29/31 (93%) Strand = Plus / Plus Query: 101 tagagctagattaatttataatccatatacc 131 |||||||| || ||||||||||||||||||| Sbjct: 92953 tagagctaaataaatttataatccatatacc 92983
>gb|AC161590.2| Mus musculus BAC clone RP24-300B21 from chromosome 9, complete sequence Length = 162840 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 298 gatttattcatgtatatgtatat 320 ||||||||||||||||||||||| Sbjct: 121819 gatttattcatgtatatgtatat 121841
>emb|CR457462.13| Zebrafish DNA sequence from clone CH211-1O7 in linkage group 13, complete sequence Length = 166823 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 123142 tgtatatgtatatatgtgtatgt 123164
>emb|AL662810.16| Mouse DNA sequence from clone RP23-42P24 on chromosome 11 Contains a novel gene (9630006B20Rik), a novel gene, a ribosomal protein S12 (Rps12) pseudogene, a novel gene (LOC268391), the Bcl11a gene for B-cell CLL/lymphoma 11A (zinc finger protein), two novel genes and three CpG islands, complete sequence Length = 267641 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 306 catgtatatgtatatatgtgtat 328 ||||||||||||||||||||||| Sbjct: 56301 catgtatatgtatatatgtgtat 56323
>gb|AC134399.12| Mus musculus chromosome 5, clone RP24-282I19, complete sequence Length = 155228 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 310 tatatgtatatatgtgtatgtga 332 ||||||||||||||||||||||| Sbjct: 128175 tatatgtatatatgtgtatgtga 128197
>gb|AC092993.3| Homo sapiens 3 BAC RP11-649C16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 147859 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 306 catgtatatgtatatatgtgtat 328 ||||||||||||||||||||||| Sbjct: 77749 catgtatatgtatatatgtgtat 77771
>emb|AL928605.22| Mouse DNA sequence from clone RP23-139P14 on chromosome 4, complete sequence Length = 209024 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 187669 tgtatatgtatatatgtgtatgt 187647
>gb|AC068907.53| Mus musculus strain C57BL/6J clone rp23-347f7 map 13, complete sequence Length = 232472 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 142223 tgtatatgtatatatgtgtatgt 142201
>gb|AC016571.7| Homo sapiens chromosome 5 clone CTB-109A12, complete sequence Length = 73304 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 13355 tgtatatgtatatatgtgtatgt 13377
>gb|AC116801.9| Mus musculus chromosome 8, clone RP24-337F7, complete sequence Length = 168297 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 155797 tgtatatgtatatatgtgtatgt 155775
>gb|AC159283.2| Mus musculus BAC clone RP23-317B21 from chromosome 12, complete sequence Length = 245361 Score = 46.1 bits (23), Expect = 0.072 Identities = 32/35 (91%) Strand = Plus / Plus Query: 297 ggatttattcatgtatatgtatatatgtgtatgtg 331 |||| |||| || |||||||||||||||||||||| Sbjct: 225791 ggatctatttatatatatgtatatatgtgtatgtg 225825
>gb|AC152502.5| Mus musculus BAC clone RP23-415D12 from chromosome 16, complete sequence Length = 180876 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 131155 tgtatatgtatatatgtgtatgt 131133
>gb|AC159237.2| Mus musculus BAC clone RP24-464G10 from chromosome 12, complete sequence Length = 222209 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 46057 tgtatatgtatatatgtgtatgt 46079
>gb|AC012671.7| Homo sapiens BAC clone RP11-554H10 from 2, complete sequence Length = 198694 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 36064 tgtatatgtatatatgtgtatgt 36086
>gb|AC104081.2| Homo sapiens BAC clone RP11-559A1 from 2, complete sequence Length = 142118 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 98529 tgtatatgtatatatgtgtatgt 98551
>gb|AC134550.5| Mus musculus BAC clone RP24-272L6 from chromosome 3, complete sequence Length = 164204 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 109551 tgtatatgtatatatgtgtatgt 109529
>gb|AC009976.4|AC009976 Homo sapiens BAC clone RP11-509B6 from Y, complete sequence Length = 179060 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 108859 tgtatatgtatatatgtgtatgt 108881 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 91229 tgtatatgtatatatgtgtatgt 91207
>gb|AC009464.8| Homo sapiens 12 BAC RP11-19E18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 146945 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 306 catgtatatgtatatatgtgtat 328 ||||||||||||||||||||||| Sbjct: 66437 catgtatatgtatatatgtgtat 66415
>gb|AC130337.6| Homo sapiens chromosome 8, clone RP13-204L4, complete sequence Length = 162510 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 306 catgtatatgtatatatgtgtat 328 ||||||||||||||||||||||| Sbjct: 6315 catgtatatgtatatatgtgtat 6337
>gb|AC130379.8| Homo sapiens chromosome 17, clone RP13-383M5, complete sequence Length = 195488 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 306 catgtatatgtatatatgtgtat 328 ||||||||||||||||||||||| Sbjct: 86435 catgtatatgtatatatgtgtat 86413
>emb|BX510300.12| Mouse DNA sequence from clone RP23-221A16 on chromosome 4, complete sequence Length = 128614 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 126729 tgtatatgtatatatgtgtatgt 126751 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgtg 331 ||||| ||||||||||||||||||| Sbjct: 111990 atgtacatgtatatatgtgtatgtg 112014
>dbj|BS000112.1| Pan troglodytes chromosome 22 clone:RP43-076J24, map 22, complete sequences Length = 169786 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 306 catgtatatgtatatatgtgtat 328 ||||||||||||||||||||||| Sbjct: 1705 catgtatatgtatatatgtgtat 1683
>dbj|BS000111.1| Pan troglodytes chromosome 22 clone:PTB-093K04, map 22, complete sequences Length = 184428 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 306 catgtatatgtatatatgtgtat 328 ||||||||||||||||||||||| Sbjct: 181449 catgtatatgtatatatgtgtat 181427
>ref|NG_004636.1| Homo sapiens chromosome Y palindromes P4 and P5 (P4-P5@) on chromosome Y Length = 1351786 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 445709 tgtatatgtatatatgtgtatgt 445731 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 428079 tgtatatgtatatatgtgtatgt 428057 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtat 328 ||||||||||||||||||||| Sbjct: 1271108 tgtatatgtatatatgtgtat 1271088 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtat 328 ||||||||||||||||||||| Sbjct: 1017108 tgtatatgtatatatgtgtat 1017128
>emb|CR753876.17| Zebrafish DNA sequence from clone DKEYP-116A7 in linkage group 19, complete sequence Length = 118451 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 53310 tgtatatgtatatatgtgtatgt 53332
>gb|AC154730.3| Mus musculus BAC clone RP23-120M21 from chromosome 14, complete sequence Length = 217242 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 32542 tgtatatgtatatatgtgtatgt 32564
>gb|AC119267.8| Mus musculus chromosome 8, clone RP24-322H19, complete sequence Length = 191277 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 33516 tgtatatgtatatatgtgtatgt 33494
>dbj|AP001711.1| Homo sapiens genomic DNA, chromosome 21q, section 55/105 Length = 340000 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 306 catgtatatgtatatatgtgtat 328 ||||||||||||||||||||||| Sbjct: 4958 catgtatatgtatatatgtgtat 4936 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgt 326 |||||||||||||||||||| Sbjct: 230576 atgtatatgtatatatgtgt 230557
>gb|AC115761.12| Mus musculus chromosome 7, clone RP23-62N10, complete sequence Length = 215013 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 201903 tgtatatgtatatatgtgtatgt 201881
>gb|AC116782.11| Mus musculus chromosome 5, clone RP24-145A24, complete sequence Length = 167925 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 78713 tgtatatgtatatatgtgtatgt 78735
>gb|AC139040.8| Mus musculus chromosome 19, clone RP23-292H20, complete sequence Length = 206197 Score = 46.1 bits (23), Expect = 0.072 Identities = 26/27 (96%) Strand = Plus / Minus Query: 305 tcatgtatatgtatatatgtgtatgtg 331 |||| |||||||||||||||||||||| Sbjct: 168793 tcatatatatgtatatatgtgtatgtg 168767
>emb|AL844588.17| Mouse DNA sequence from clone RP23-244N6 on chromosome 2, complete sequence Length = 142422 Score = 46.1 bits (23), Expect = 0.072 Identities = 26/27 (96%) Strand = Plus / Plus Query: 306 catgtatatgtatatatgtgtatgtga 332 ||||||||||||| ||||||||||||| Sbjct: 109337 catgtatatgtatgtatgtgtatgtga 109363
>dbj|AP003152.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-356B22, complete sequences Length = 190116 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 169154 tgtatatgtatatatgtgtatgt 169132
>emb|BX005276.7| Mouse DNA sequence from clone RP24-85M20 on chromosome 4, complete sequence Length = 54826 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 115 tgtatatgtatatatgtgtatgt 137
>gb|AC134523.5| Mus musculus BAC clone RP24-492M8 from 5, complete sequence Length = 178801 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 306 catgtatatgtatatatgtgtat 328 ||||||||||||||||||||||| Sbjct: 31121 catgtatatgtatatatgtgtat 31099
>gb|AC127582.4| Mus musculus BAC clone RP24-89J3 from 12, complete sequence Length = 217949 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 61701 tgtatatgtatatatgtgtatgt 61679
>gb|AC124750.5| Mus musculus BAC clone RP23-273A20 from 8, complete sequence Length = 215042 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 15282 tgtatatgtatatatgtgtatgt 15304
>gb|AC165248.2| Mus musculus BAC clone RP24-219D2 from chromosome 16, complete sequence Length = 190373 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 40962 tgtatatgtatatatgtgtatgt 40984
>gb|AC109618.12| Mus musculus chromosome 8, clone RP23-478L3, complete sequence Length = 173511 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 148495 tgtatatgtatatatgtgtatgt 148517
>emb|AL772255.12| Mouse DNA sequence from clone RP23-172B16 on chromosome 2, complete sequence Length = 205973 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatgt 330 ||||||||||||||||||||||| Sbjct: 147721 tgtatatgtatatatgtgtatgt 147699
>dbj|AP000248.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone:P289H18, complete sequence Length = 146847 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 306 catgtatatgtatatatgtgtat 328 ||||||||||||||||||||||| Sbjct: 87042 catgtatatgtatatatgtgtat 87020
>dbj|AP000210.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone f43D11-119B8, segment 8/12, complete sequence Length = 100000 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 306 catgtatatgtatatatgtgtat 328 ||||||||||||||||||||||| Sbjct: 17946 catgtatatgtatatatgtgtat 17924
>gb|AC133586.12| Mus musculus chromosome 15, clone RP24-456H16, complete sequence Length = 149834 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 41118 atgtatatgtatatatgtgtat 41139 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatgtg 331 ||||||||| |||||||||||||| Sbjct: 41143 tgtatatgtgtatatgtgtatgtg 41166
>gb|AC102795.28| Mus musculus chromosome 3, clone RP23-182B7, complete sequence Length = 226270 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 141791 atgtatatgtatatatgtgtat 141812
>gb|AC160121.2| Mus musculus BAC clone RP23-402P14 from chromosome 13, complete sequence Length = 183152 Score = 44.1 bits (22), Expect = 0.28 Identities = 28/30 (93%) Strand = Plus / Minus Query: 299 atttattcatgtatatgtatatatgtgtat 328 |||||| ||||||||||||| ||||||||| Sbjct: 11463 atttatacatgtatatgtatctatgtgtat 11434
>gb|AC121879.3| Mus musculus chromosome 19 clone RP24-132B24, complete sequence Length = 134662 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 306 catgtatatgtatatatgtgtatgtg 331 ||||||| |||||||||||||||||| Sbjct: 84408 catgtatgtgtatatatgtgtatgtg 84383 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgtg 331 |||||||||||||| |||||||||| Sbjct: 58261 atgtatatgtatatgtgtgtatgtg 58285
>gb|AC162528.5| Mus musculus BAC clone RP23-4P1 from chromosome 5, complete sequence Length = 219218 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 308 tgtatatgtatatatgtgtatg 329 |||||||||||||||||||||| Sbjct: 89902 tgtatatgtatatatgtgtatg 89881
>gb|AC163684.5| Mus musculus BAC clone RP23-8N10 from chromosome 13, complete sequence Length = 234717 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgtga 332 |||||||||| ||||||||||||||| Sbjct: 183127 atgtatatgtgtatatgtgtatgtga 183102
>gb|AC151577.2| Mus musculus BAC clone RP23-371D23 from chromosome 5, complete sequence Length = 206735 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 308 tgtatatgtatatatgtgtatg 329 |||||||||||||||||||||| Sbjct: 183485 tgtatatgtatatatgtgtatg 183506
>gb|AC154555.3| Mus musculus BAC clone RP23-418L12 from chromosome 16, complete sequence Length = 192614 Score = 44.1 bits (22), Expect = 0.28 Identities = 28/30 (93%) Strand = Plus / Plus Query: 299 atttattcatgtatatgtatatatgtgtat 328 |||||| ||||| ||||||||||||||||| Sbjct: 172457 atttatgcatgtgtatgtatatatgtgtat 172486
>gb|AC163351.2| Mus musculus BAC clone RP23-150D4 from chromosome 13, complete sequence Length = 214062 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 310 tatatgtatatatgtgtatgtg 331 |||||||||||||||||||||| Sbjct: 207687 tatatgtatatatgtgtatgtg 207708
>gb|AC159286.3| Mus musculus BAC clone RP23-314E22 from chromosome 14, complete sequence Length = 210984 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 306 catgtatatgtatatatgtgtatgtg 331 ||||||| |||||||||||||||||| Sbjct: 25485 catgtatgtgtatatatgtgtatgtg 25460
>gb|AC163032.5| Mus musculus BAC clone RP24-144G20 from chromosome 12, complete sequence Length = 186416 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 306 catgtatatgtatatatgtgtatgtg 331 |||||||||||| ||||||||||||| Sbjct: 182674 catgtatatgtacatatgtgtatgtg 182649
>gb|DQ211982.1| Toxoplasma gondii eukaryotic translation initiation factor 5 (eIF5) gene, complete cds Length = 5000 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 1139 atgtatatgtatatatgtgtat 1160
>gb|AF110520.1|MMHC425O18 Mus musculus major histocompatibility complex region NG27, NG28, RPS28, NADH oxidoreductase, NG29, KIFC1, Fas-binding protein, BING1, tapasin, RalGDS-like, KE2, BING4, beta 1,3-galactosyl transferase, and RPS18 genes, complete cds; Sacm21 gene, partial cds; and unknown gene Length = 213245 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 312 tatgtatatatgtgtatgtgac 333 |||||||||||||||||||||| Sbjct: 28738 tatgtatatatgtgtatgtgac 28759
>gb|AC113509.14| Mus musculus chromosome 1, clone RP23-377L11, complete sequence Length = 193588 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 310 tatatgtatatatgtgtatgtg 331 |||||||||||||||||||||| Sbjct: 122485 tatatgtatatatgtgtatgtg 122506
>gb|AC162883.4| Mus musculus chromosome 1, clone RP24-148E21, complete sequence Length = 154199 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 88827 atgtatatgtatatatgtgtat 88806
>gb|AY024198.1| Oryza sativa microsatellite MRG6523 containing (TATG)X7, closest to marker R1862, genomic sequence Length = 228 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 204 atgtatatgtatatatgtgtat 225 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||| ||||||| Sbjct: 46 atgtatatgtatatatatgtatgt 69
>gb|AY023823.1| Oryza sativa microsatellite MRG6148 containing (ATAC)X8, closest to marker R1862, genomic sequence Length = 232 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 28 atgtatatgtatatatgtgtat 7 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||| ||||||| Sbjct: 190 atgtatatgtatatatatgtatgt 167
>gb|AY018342.1| Oryza sativa microsatellite MRG0667 containing (AT)X15, genomic sequence Length = 230 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 306 catgtatatgtatatatgtgtatgtg 331 ||||||| |||||||||||||||||| Sbjct: 224 catgtatgtgtatatatgtgtatgtg 199
>gb|AC004775.1| Homo sapiens chromosome 5, P1 clone 1308e5 (LBNL H13), complete sequence Length = 81837 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 310 tatatgtatatatgtgtatgtg 331 |||||||||||||||||||||| Sbjct: 56459 tatatgtatatatgtgtatgtg 56438
>gb|AC154314.2| Mus musculus BAC clone RP23-347J22 from chromosome 13, complete sequence Length = 189556 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 306 catgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||| |||| Sbjct: 23387 catgtatatgtatatatgtgtgtgtg 23362
>gb|AC157598.4| Mus musculus BAC clone RP23-193D3 from chromosome 17, complete sequence Length = 222399 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 311 atatgtatatatgtgtatgtga 332 |||||||||||||||||||||| Sbjct: 123552 atatgtatatatgtgtatgtga 123531
>gb|AC119877.9| Mus musculus chromosome 3, clone RP24-324H23, complete sequence Length = 155784 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 310 tatatgtatatatgtgtatgtg 331 |||||||||||||||||||||| Sbjct: 3131 tatatgtatatatgtgtatgtg 3110
>gb|AC079843.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0013J21, complete sequence Length = 155290 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 310 tatatgtatatatgtgtatgtg 331 |||||||||||||||||||||| Sbjct: 25193 tatatgtatatatgtgtatgtg 25172
>gb|AC163622.4| Mus musculus BAC clone RP24-566G6 from chromosome y, complete sequence Length = 166756 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 306 catgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||| |||| Sbjct: 124312 catgtatatgtatatatgtgtgtgtg 124337
>gb|AC117724.14| Mus musculus chromosome 5, clone RP24-347F19, complete sequence Length = 183083 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 4053 atgtatatgtatatatgtgtat 4032
>gb|AC120400.11| Mus musculus chromosome 1, clone RP24-351P4, complete sequence Length = 144055 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 306 catgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||| |||| Sbjct: 65556 catgtatatgtatatatgtgtgtgtg 65531
>gb|AC123746.20| Mus musculus chromosome 1, clone RP24-122E21, complete sequence Length = 160429 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 309 gtatatgtatatatgtgtatgt 330 |||||||||||||||||||||| Sbjct: 39728 gtatatgtatatatgtgtatgt 39749
>gb|AC116507.9| Mus musculus chromosome 19, clone RP24-309C17, complete sequence Length = 168364 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 310 tatatgtatatatgtgtatgtg 331 |||||||||||||||||||||| Sbjct: 37706 tatatgtatatatgtgtatgtg 37685 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgt 326 |||||||||||||||||||| Sbjct: 92559 atgtatatgtatatatgtgt 92578
>gb|AC158594.12| Mus musculus 10 BAC RP23-197I5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 218257 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 310 tatatgtatatatgtgtatgtg 331 |||||||||||||||||||||| Sbjct: 5243 tatatgtatatatgtgtatgtg 5222
>gb|AC069469.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-75J13, complete sequence Length = 172786 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 55009 atgtatatgtatatatgtgtat 54988
>gb|AC138376.11| Mus musculus chromosome 7, clone RP23-53O7, complete sequence Length = 247484 Score = 44.1 bits (22), Expect = 0.28 Identities = 28/30 (93%) Strand = Plus / Plus Query: 302 tattcatgtatatgtatatatgtgtatgtg 331 |||| |||||||||||||||||||| |||| Sbjct: 51179 tatttatgtatatgtatatatgtgtgtgtg 51208
>gb|AC084326.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-329J17, complete sequence Length = 149941 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 309 gtatatgtatatatgtgtatgt 330 |||||||||||||||||||||| Sbjct: 17002 gtatatgtatatatgtgtatgt 16981 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 298 gatttattcatgtatatgtatatatgtgtatgt 330 ||||||| |||| ||||||||||||||||||| Sbjct: 16973 gatttatgtatgtgtatgtatatatgtgtatgt 16941
>gb|AC183963.2| Pan troglodytes BAC clone CH251-562F21 from chromosome 17, complete sequence Length = 213058 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 137008 atgtatatgtatatatgtgtat 136987
>gb|AC120791.13| Mus musculus chromosome 7, clone RP23-56I4, complete sequence Length = 246249 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 227338 atgtatatgtatatatgtgtat 227359
>gb|AC140931.5| Mus musculus BAC clone RP23-3L22 from chromosome 15, complete sequence Length = 202576 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 112980 atgtatatgtatatatgtgtat 112959
>gb|AC133600.2| Mus musculus BAC clone RP24-399N24 from chromosome 3, complete sequence Length = 197428 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 30782 atgtatatgtatatatgtgtat 30761
>gb|AC139578.4| Mus musculus BAC clone RP23-188P12 from chromosome 18, complete sequence Length = 179415 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 306 catgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||| |||| Sbjct: 90645 catgtatatgtatatatgtgtgtgtg 90670
>gb|AC134561.5| Mus musculus BAC clone RP24-111C16 from chromosome 8, complete sequence Length = 179978 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 310 tatatgtatatatgtgtatgtg 331 |||||||||||||||||||||| Sbjct: 168552 tatatgtatatatgtgtatgtg 168531
>gb|AC101713.7| Mus musculus chromosome 15, clone RP23-282L9, complete sequence Length = 189145 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 299 atttattcatgtatatgtatatatgt 324 ||||||| |||||||||||||||||| Sbjct: 151302 atttatttatgtatatgtatatatgt 151327
>gb|AC110496.12| Mus musculus chromosome 7, clone RP23-56P3, complete sequence Length = 170784 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 61075 atgtatatgtatatatgtgtat 61054
>gb|AC111275.4| Rattus norvegicus 4 BAC CH230-49L22 (Children's Hospital Oakland Research Institute) complete sequence Length = 227595 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 87729 atgtatatgtatatatgtgtat 87708
>gb|AC106595.9| Rattus norvegicus 7 BAC CH230-237N20 (Children's Hospital Oakland Research Institute) complete sequence Length = 214961 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 7438 atgtatatgtatatatgtgtat 7459
>gb|AC131081.7| Mus musculus chromosome 10, clone RP23-438J1, complete sequence Length = 214060 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 306 catgtatatgtatatatgtgtatgtg 331 ||||||||||||| |||||||||||| Sbjct: 133651 catgtatatgtatgtatgtgtatgtg 133676
>gb|AC133968.3| Mus musculus BAC clone RP23-60J24 from chromosome 18, complete sequence Length = 206569 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 131786 atgtatatgtatatatgtgtat 131807
>gb|AC148008.2| Mus musculus BAC clone RP23-253C14 from chromosome 18, complete sequence Length = 161965 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 306 catgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||| |||| Sbjct: 148936 catgtatatgtatatatgtgtgtgtg 148961
>gb|AC146197.3| Pan troglodytes BAC clone CH251-450H3 from Y, complete sequence Length = 182113 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 309 gtatatgtatatatgtgtatgt 330 |||||||||||||||||||||| Sbjct: 16276 gtatatgtatatatgtgtatgt 16297
>gb|AC140187.3| Mus musculus BAC clone RP24-364N20 from chromosome Y, complete sequence Length = 151358 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 306 catgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||| |||| Sbjct: 132359 catgtatatgtatatatgtgtgtgtg 132334
>gb|AC134595.3| Mus musculus BAC clone RP23-388E14 from chromosome 15, complete sequence Length = 189263 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 128266 atgtatatgtatatatgtgtat 128287 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 306 catgtatatgtatatatgtgtatgt 330 ||||||||||||||||| ||||||| Sbjct: 134392 catgtatatgtatatatatgtatgt 134368
>gb|AC096707.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1583_A05, complete sequence Length = 126987 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 4699 atgtatatgtatatatgtgtat 4720 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 4655 atgtatatgtatatatgtgtat 4676 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgt 330 |||||||||||||||| ||||||| Sbjct: 4493 atgtatatgtatatatatgtatgt 4516
>gb|AC093955.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1240_E09, complete sequence Length = 118742 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 60720 atgtatatgtatatatgtgtat 60741 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 60676 atgtatatgtatatatgtgtat 60697
>gb|AC149044.1| Pan troglodytes chromosome X clone PTB-089E19 map human ortholog q27.1, complete sequence Length = 193569 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtatgtga 332 |||||||||||||||||| ||||||| Sbjct: 144752 atgtatatgtatatatgtatatgtga 144777
>gb|AC125014.8| Mus musculus chromosome 16, clone RP24-149C21, complete sequence Length = 177471 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 310 tatatgtatatatgtgtatgtg 331 |||||||||||||||||||||| Sbjct: 125113 tatatgtatatatgtgtatgtg 125134
>gb|AC117648.14| Mus musculus, clone RP23-254P23, complete sequence Length = 228273 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 138656 atgtatatgtatatatgtgtat 138635
>gb|AC165305.4| Mus musculus chromosome 8, clone RP23-101P20, complete sequence Length = 193230 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 156164 atgtatatgtatatatgtgtat 156143
>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold Length = 1996640 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 306 catgtatatgtatatatgtgtatgtg 331 ||||| |||||||||||||||||||| Sbjct: 63873 catgtgtatgtatatatgtgtatgtg 63848 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 310 tatatgtatatatgtgtatgt 330 ||||||||||||||||||||| Sbjct: 742280 tatatgtatatatgtgtatgt 742260
>gb|AC163903.4| Mus musculus BAC clone RP24-314J18 from chromosome 17, complete sequence Length = 197522 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 21374 atgtatatgtatatatgtgtat 21353
>gb|AC165966.3| Mus musculus BAC clone RP23-259L2 from chromosome 17, complete sequence Length = 194944 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 38557 atgtatatgtatatatgtgtat 38578
>gb|AC155823.8| Mus musculus BAC clone RP23-348C5 from chromosome 8, complete sequence Length = 219597 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 310 tatatgtatatatgtgtatgtg 331 |||||||||||||||||||||| Sbjct: 155045 tatatgtatatatgtgtatgtg 155066
>gb|AC162901.4| Mus musculus BAC clone RP23-417K5 from chromosome 8, complete sequence Length = 205244 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 311 atatgtatatatgtgtatgtga 332 |||||||||||||||||||||| Sbjct: 67587 atatgtatatatgtgtatgtga 67566
>gb|AY459387.1| Gorilla gorilla LDOC1 gene, complete cds Length = 61316 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 310 tatatgtatatatgtgtatgtg 331 |||||||||||||||||||||| Sbjct: 45009 tatatgtatatatgtgtatgtg 44988
>gb|AC068663.5| Mus musculus strain C57BL6/J chromosome 5 clone RP23-280D18, complete sequence Length = 221134 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 95100 atgtatatgtatatatgtgtat 95121
>gb|AC147241.2| Mus musculus BAC clone RP23-417C21 from chromosome 12, complete sequence Length = 199956 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 310 tatatgtatatatgtgtatgtg 331 |||||||||||||||||||||| Sbjct: 40618 tatatgtatatatgtgtatgtg 40639
>gb|AC123052.4| Mus musculus chromosome 13 clone RP24-373D10, complete sequence Length = 175595 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 306 catgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||| |||| Sbjct: 158193 catgtatatgtatatatgtgtctgtg 158218
>gb|AC116279.15| Rattus norvegicus 1 BAC CH230-62L22 (Children's Hospital Oakland Research Institute) complete sequence Length = 147257 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 112787 atgtatatgtatatatgtgtat 112766
>gb|AC147147.2| Pan troglodytes BAC clone CH251-230I19 from Y, complete sequence Length = 143402 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 306 catgtatatgtatatatgtgtatgtg 331 ||||||||||||||| |||||||||| Sbjct: 23658 catgtatatgtatatgtgtgtatgtg 23683
>gb|AC126270.4| Mus musculus BAC clone RP23-233A12 from chromosome 10, complete sequence Length = 208709 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 83796 atgtatatgtatatatgtgtat 83817
>gb|AC144808.2| Mus musculus BAC clone RP24-434O1 from chromosome 5, complete sequence Length = 152463 Score = 44.1 bits (22), Expect = 0.28 Identities = 28/30 (93%) Strand = Plus / Minus Query: 302 tattcatgtatatgtatatatgtgtatgtg 331 ||||||| ||||||||||||||||| |||| Sbjct: 100028 tattcatatatatgtatatatgtgtgtgtg 99999
>emb|CR380838.2| Pan troglodytes chromosome X BAC RP43-021E02, complete sequence Length = 205764 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 152065 atgtatatgtatatatgtgtat 152044 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 152016 atgtatatgtatatatgtgtat 151995 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 151967 atgtatatgtatatatgtgtat 151946 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 151918 atgtatatgtatatatgtgtat 151897 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 151869 atgtatatgtatatatgtgtat 151848 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 151820 atgtatatgtatatatgtgtat 151799
>emb|CT009738.8| Mouse DNA sequence from clone RP23-217H9 on chromosome 12, complete sequence Length = 209619 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 306 catgtatatgtatatatgtgtatgtg 331 ||||||||||||||||||||| |||| Sbjct: 97138 catgtatatgtatatatgtgtgtgtg 97163
>gb|AC122402.2| Mus musculus BAC clone RP24-108B4 from chromosome 13, complete sequence Length = 175669 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 310 tatatgtatatatgtgtatgtg 331 |||||||||||||||||||||| Sbjct: 69767 tatatgtatatatgtgtatgtg 69746
>gb|AC146452.3| Pan troglodytes BAC clone CH251-483N3 from Y, complete sequence Length = 215209 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 306 catgtatatgtatatatgtgtatgtg 331 ||||||||||||||| |||||||||| Sbjct: 33749 catgtatatgtatatgtgtgtatgtg 33724
>gb|AC147575.1| Homo sapiens chromosome 5 clone RP11-998B18, complete sequence Length = 190680 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 atgtatatgtatatatgtgtat 328 |||||||||||||||||||||| Sbjct: 86731 atgtatatgtatatatgtgtat 86710 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8,531,775 Number of Sequences: 3902068 Number of extensions: 8531775 Number of successful extensions: 305743 Number of sequences better than 10.0: 2725 Number of HSP's better than 10.0 without gapping: 2769 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 271976 Number of HSP's gapped (non-prelim): 33715 length of query: 336 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 314 effective length of database: 17,147,199,772 effective search space: 5384220728408 effective search space used: 5384220728408 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)