>K0853_HUMAN (Q5T200) Protein KIAA0853|
          Length = 1668

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = +1

Query: 277  KGNMVISIVRSHSENGTNMTGLTRRRRGLWNHWNRSPEQKDISDCVPRASLQNK 438
            K  ++  +VR       + + LT  R+G W   +R PE+K+ S       L+ K
Sbjct: 860  KHRLLSQVVRPQESRSLSPSHLTEDRQGRWKEEDRKPERKESSRRYEEQELKEK 913

>PILQ_NEIGO (P35819) Type IV pilus biogenesis and competence protein pilQ|
           precursor (Outer membrane protein omc)
          Length = 720

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
 Frame = +1

Query: 88  DELHSTGTLAGTRILACNSKSSTIKQSWH-----DLQTGGDGTTGKRCEKLVEGITGNSS 252
           + L  T TLA  R+L  N K + I+  +        ++GG  +T    +K V G+T  ++
Sbjct: 562 ESLSKTKTLANPRVLTQNRKEAKIESGYEIPFTVTTRSGGGNSTNTELKKAVLGLTVTAN 621

Query: 253 LS---KVLFTGKGN 285
           ++   +++ T K N
Sbjct: 622 ITPDGQIIMTVKIN 635

>TRPD_BACLD (Q65I32) Anthranilate phosphoribosyltransferase (EC 2.4.2.18)|
          Length = 338

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 23/61 (37%), Positives = 30/61 (49%)
 Frame = -2

Query: 390 LGTPIPVIPKPTSSSRQARHVGTIFTM*SHNGNDHVALARKQHLRERTVSGDSFHELLAP 211
           LG  I   P+ T  S + R++G ++    H+   HVA ARK  L  RTV       LL P
Sbjct: 125 LGVSIQTSPEETIKSIERRNMGFLYAPSYHSSMKHVAGARKD-LAFRTV-----FNLLGP 178

Query: 210 L 208
           L
Sbjct: 179 L 179

>WNT4_XENLA (P49338) Protein Wnt-4 precursor (XWnt-4)|
          Length = 351

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +1

Query: 172 HDLQTGGDGTTGKRCEKLVEGITG 243
           HDL+ G  GTTG++C K  + I G
Sbjct: 282 HDLKNGVLGTTGRQCNKTSKAIDG 305

>SEC39_YEAST (Q12745) Protein transport protein SEC39 (Dependent on SLY1-20|
           protein 3)
          Length = 709

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 20/72 (27%), Positives = 37/72 (51%)
 Frame = +1

Query: 223 LVEGITGNSSLSKVLFTGKGNMVISIVRSHSENGTNMTGLTRRRRGLWNHWNRSPEQKDI 402
           L +G+  NS  S+ L +     V+ I+  +SEN  N++ LT +   LW+  +  P++  I
Sbjct: 259 LEKGVKDNSEASRKLQSN----VVDILFHNSENLFNLSSLTHKLDELWSILSGFPDEITI 314

Query: 403 SDCVPRASLQNK 438
            +     +L+ K
Sbjct: 315 EEQKTITALEMK 326

>GLUB7_ORYSA (Q52PJ1) Glutelin type-B 7 precursor [Contains: Glutelin type-B 7|
           acidic chain; Glutelin type-B 7 basic chain]
          Length = 495

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 468 LLCPGARMQLFILQTSPWHT 409
           LLC G+  QLF   T+PWH+
Sbjct: 17  LLCQGSMAQLFNPSTNPWHS 36

>GLUB2_ORYSA (Q02897) Glutelin type-B 2 precursor [Contains: Glutelin type-B 2|
           acidic chain; Glutelin type-B 2 basic chain]
          Length = 495

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 468 LLCPGARMQLFILQTSPWHT 409
           LLC G+  QLF   T+PWH+
Sbjct: 17  LLCQGSMAQLFNPSTNPWHS 36

>CSLA_PEDHE (Q59288) Chondroitinase AC precursor (EC 4.2.2.5) (Chondroitin AC|
           lyase) (Chondroitin sulfate AC lyase) (Chondroitin AC
           eliminase)
          Length = 700

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 23/97 (23%), Positives = 42/97 (43%)
 Frame = +1

Query: 115 AGTRILACNSKSSTIKQSWHDLQTGGDGTTGKRCEKLVEGITGNSSLSKVLFTGKGNMVI 294
           AG    A  + ++T+ QSW  L      T GK         TG   ++     G+  ++ 
Sbjct: 474 AGINSNAPENITTTLNQSW--LNGPVISTAGK---------TGRGKITTFKAQGQFWLLH 522

Query: 295 SIVRSHSENGTNMTGLTRRRRGLWNHWNRSPEQKDIS 405
             +  +   G N++  T+ ++G W H N S  + ++S
Sbjct: 523 DAIGYYFPEGANLSLSTQSQKGNWFHINNSHSKDEVS 559

>PILQ_NEIG1 (Q5FAD2) Type IV pilus biogenesis and competence protein pilQ|
           precursor (Outer membrane protein omc)
          Length = 723

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
 Frame = +1

Query: 88  DELHSTGTLAGTRILACNSKSSTIKQSWH-----DLQTGGDGTTGKRCEKLVEGITGNSS 252
           + L  T TLA  R+L  N K + I+  +         +GG  +T    +K V G+T   +
Sbjct: 556 ESLSKTKTLANPRVLTQNRKEAKIESGYEIPFTVTTASGGGNSTNTELKKAVLGLTVTPN 615

Query: 253 LS---KVLFTGKGN 285
           ++   +++ T K N
Sbjct: 616 ITPDGQIIMTVKIN 629


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,147,592
Number of Sequences: 219361
Number of extensions: 1924280
Number of successful extensions: 4853
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4852
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4142954952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)