>GIGAN_ORYSA (Q9AWL7) GIGANTEA protein|
          Length = 1160

 Score = 79.0 bits (193), Expect = 3e-15
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -3

Query: 357  ANTVNWQADVERCIDWEARSRRATGMTLAFLTXAANELGCPXPC 226
            A+ +NWQADVERCI+WEA SRRATG+TLAFLT AA ELGCP  C
Sbjct: 1117 ASIINWQADVERCIEWEAHSRRATGLTLAFLTAAAKELGCPLTC 1160

>GIGAN_ARATH (Q9SQI2) GIGANTEA protein|
          Length = 1173

 Score = 48.1 bits (113), Expect = 5e-06
 Identities = 19/40 (47%), Positives = 28/40 (70%)
 Frame = -3

Query: 357  ANTVNWQADVERCIDWEARSRRATGMTLAFLTXAANELGC 238
            A +++W+AD++ C++WEA S  +T M   FL  AA ELGC
Sbjct: 1128 AASIDWKADIQNCLNWEAHSLLSTTMPTQFLDTAARELGC 1167

>MUTS_PELCD (Q3A4F1) DNA mismatch repair protein mutS|
          Length = 870

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -3

Query: 180 WCEQLLHGQRAGWLINPL 127
           +CEQLL G    WLINPL
Sbjct: 182 FCEQLLQGASGSWLINPL 199

>TMPSD_MOUSE (Q5U405) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic|
           serine protease) (Membrane-type mosaic serine protease)
          Length = 543

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = +1

Query: 16  DCKXKSHRGSKAPXDWEHQLIYITSWGADWEWKAILEQGIN*PSCSLTMQQL 171
           DCK KS        DW+  L+ + S G+  EW  +     N      T QQL
Sbjct: 192 DCKMKSDELGCVRFDWDKSLLKVYS-GSSGEWLPVCSSSWNDTDSKRTCQQL 242

>TMPSD_HUMAN (Q9BYE2) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic|
           serine protease) (Membrane-type mosaic serine protease)
          Length = 581

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 18/52 (34%), Positives = 22/52 (42%)
 Frame = +1

Query: 16  DCKXKSHRGSKAPXDWEHQLIYITSWGADWEWKAILEQGIN*PSCSLTMQQL 171
           DCK KS        DW+  L+ I S G+  +W  I     N      T QQL
Sbjct: 211 DCKLKSDELGCVRFDWDKSLLKIYS-GSSHQWLPICSSNWNDSYSEKTCQQL 261

>OSTA_VIBF1 (Q5E862) Organic solvent tolerance protein precursor|
          Length = 786

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 1   EHLTXDCKXKSHRGSKAPXDWEHQLIYITSWGADWEWKAI 120
           E+L  D K K  +GS+    W+H  IY   W  D E+  +
Sbjct: 293 EYLNEDDKFKD-KGSRWGVSWDHSGIYQQHWKFDVEYSKV 331

>EX7L_CAUCR (Q9A649) Probable exodeoxyribonuclease VII large subunit (EC|
           3.1.11.6) (Exonuclease VII large subunit)
          Length = 505

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +2

Query: 131 GLISHPAR*PCSNCSHQLXSVADCQLQIWPC-QQGXGQPSSLAAXVR 268
           G+I+ P      +  H++     CQ+ +WPC  QG      ++A +R
Sbjct: 147 GVITSPTGAVIRDILHRIRDRWPCQVLVWPCVVQGDAAAGQVSAAIR 193

>Y2609_MYCBO (P65024) Hypothetical protein Mb2609c|
          Length = 340

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -2

Query: 352 HGELASGCREMYRLGSPQPPCHRD 281
           H EL S  RE+YR G   PP +R+
Sbjct: 279 HPELVSRYRELYRRGPYLPPSYRE 302

>Y2578_MYCTU (P65023) Hypothetical protein Rv2578c/MT2655|
          Length = 340

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -2

Query: 352 HGELASGCREMYRLGSPQPPCHRD 281
           H EL S  RE+YR G   PP +R+
Sbjct: 279 HPELVSRYRELYRRGPYLPPSYRE 302


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,837,804
Number of Sequences: 219361
Number of extensions: 671950
Number of successful extensions: 1792
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1792
length of database: 80,573,946
effective HSP length: 95
effective length of database: 59,734,651
effective search space used: 1433631624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)