>Y877_HAEIN (P44915) Hypothetical GTP-binding protein HI0877|
          Length = 390

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = -1

Query: 246 FLALLPGGFIIPVCRSCLDCLIAEDSELRARMRIPTRVPAEWSSSHR 106
           F++   G  + P+CR  +D +IA   E   +   P  V  +W   H+
Sbjct: 312 FISAATGKNVSPLCRDIMDFIIANPREAETQQVAPEEVKFKWEDYHQ 358

>VE6_HPV61 (Q80948) Protein E6|
          Length = 146

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 353 WYHFHHVISQWKRPCCPCR 297
           + HFH++  QW   CC CR
Sbjct: 119 YIHFHYIAGQWTGRCCQCR 137

>CSTN2_RAT (Q8VDA1) Calsyntenin-2 precursor|
          Length = 965

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 9/47 (19%)
 Frame = +1

Query: 202  PANWDDETTGKKREKLSEGIAGNSSLSEE---------GCLRQGQHG 315
            P + +DET G++ E+  EG++ +SS S++         G +R GQ G
Sbjct: 898  PGHGEDETEGEEEEEAEEGMSSSSSGSDDSEEEEEEGMGRVRHGQSG 944

>CRY2_ARATH (Q96524) Cryptochrome-2 (Blue light photoreceptor)|
          Length = 612

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -3

Query: 316 DHVALAVNSPPPRENYFRQFLLRVSRASSRWFHHP 212
           D+ AL      P   Y RQ+L  ++R  + W HHP
Sbjct: 414 DNPALQGAKYDPEGEYIRQWLPELARLPTEWIHHP 448

>OSBL6_MOUSE (Q8BXR9) Oxysterol-binding protein-related protein 6 (OSBP-related|
           protein 6) (ORP-6)
          Length = 959

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = +3

Query: 15  WKRITRIHELHRLGDTIPAYGKSYATSRTTTDVMNSTPQGLWLECAS*LATRNPRQS 185
           W +   I  +  L  T+P YG  Y  ++ TT + N      W+E    +  RN + S
Sbjct: 726 WGKSMEILPVGTLNVTLPKYGDYYVWNKVTTCIHNILSGRRWIEHYGEVTLRNTKSS 782

>PYR5_NAEGR (Q25566) Uridine 5'-monophosphate synthase (UMP synthase)|
           [Includes: Orotate phosphoribosyltransferase (EC
           2.4.2.10) (OPRtase); Orotidine 5'-phosphate
           decarboxylase (EC 4.1.1.23) (OMPdecase)]
          Length = 494

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
 Frame = +2

Query: 257 ELPEIVLSRRRAVYGKGNMVVSIVISHGEN-----DTILSGSTI 373
           +LP ++  + R  YG GNMV  I   +  N     D I SG++I
Sbjct: 95  DLPMVICRKERKQYGTGNMVEGIYTKNETNCILIEDVITSGASI 138

>VMSA_HPBDB (P17194) Major surface antigen precursor|
          Length = 366

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 170 PSCELGCAFQPESLRSGVHHIGSCSAGSIGF 78
           P  ++ CAFQ    +   H++GSC  G  GF
Sbjct: 241 PKGKMQCAFQDTGAQISPHYVGSCPWGCPGF 271

>VMSA_HPBDU (P03145) Major surface antigen precursor|
          Length = 327

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 170 PSCELGCAFQPESLRSGVHHIGSCSAGSIGF 78
           P  ++ CAFQ    +   H++GSC  G  GF
Sbjct: 202 PKGKMQCAFQDTGAQISPHYVGSCPWGCPGF 232

>PHR1_SINAL (P40115) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA|
           photolyase) (Photoreactivating enzyme)
          Length = 501

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -3

Query: 316 DHVALAVNSPPPRENYFRQFLLRVSRASSRWFHHP 212
           D+ A+      P   Y RQ+L  ++R  + W HHP
Sbjct: 413 DNPAIQGAKYDPEGEYIRQWLPELARLPTEWIHHP 447

>TICN1_MOUSE (Q62288) Testican-1 precursor (SPOCK protein)|
          Length = 442

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +2

Query: 467 LQLSPQHLFQRKRTKCTMHLGWLGPNSLHEGRAGPEGYQAAAAGS 601
           L +S +HL  R++     H  WLGP++L + +  P    A   GS
Sbjct: 109 LCVSRKHLLPRQKKGNVAHKHWLGPSNLVKCKPCPVAQSAMVCGS 153


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,439,442
Number of Sequences: 219361
Number of extensions: 1970962
Number of successful extensions: 4581
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4581
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6541540170
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)