>ABFA_ASPNG (P42254) Alpha-N-arabinofuranosidase A precursor (EC 3.2.1.55)|
           (Arabinosidase A) (ABF A)
          Length = 628

 Score = 38.9 bits (89), Expect = 0.013
 Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
 Frame = -2

Query: 639 NDQTWNPDAIVFNS--WQQYGTPSYWMQKFFRESSGAMIHPITIXXXXXXXXXXXAITW- 469
           N   W PD I +       + + SY++Q+ F  + G  I  +T             + W 
Sbjct: 493 NSTQWTPDLIGYTQSPGDIFLSTSYYVQEMFSRNRGDTIKEVT------SDSDFGPLYWV 546

Query: 468 QDSGNNFLRVKIVNFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKV 289
             S  +   VK+ N+GS+T  LT+S+ G            TVL  S   D +++++ T+ 
Sbjct: 547 ASSAGDSYYVKLANYGSETQDLTVSIPGTST------GKLTVLADS---DPDAYNSDTQT 597

Query: 288 VPVTSQ 271
           +   S+
Sbjct: 598 LVTPSE 603

>ABF2_BACOV (Q59219) Alpha-N-arabinofuranosidase 2 (EC 3.2.1.55) (Arabinosidase|
           2)
          Length = 514

 Score = 32.7 bits (73), Expect = 0.94
 Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 7/133 (5%)
 Frame = -2

Query: 582 TPSYWMQKFFRESSGAMIHPITIXXXXXXXXXXXAI-----TWQDSGNNFLRVKIVNFGS 418
           TP+Y++ K ++    A   PI +            +     T   + +  + + + N  +
Sbjct: 385 TPTYYVFKMYKVHQDATYLPIDLTCEKMSVRDNRTVPMVSATASKNKDGVIHISLSNVDA 444

Query: 417 DTVS-LTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVT-SQLHNAAEQMQ 244
           D    +TI++   +A   A+G    +LT+S + D NSF  P  V P    ++      M+
Sbjct: 445 DEAQEITINLGDTKAK-KAIGE---ILTASKLTDYNSFEKPNIVKPAPFKEVKINKGTMK 500

Query: 243 VTLAAHSFSSFDL 205
           V L A S  + +L
Sbjct: 501 VKLPAKSIVTLEL 513

>MOBA_BIFLO (Q8GN32) Probable mobilization protein MobA|
          Length = 565

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 35/123 (28%), Positives = 50/123 (40%), Gaps = 3/123 (2%)
 Frame = +1

Query: 190 GLSKRKVERGEGVGS--ERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGRENSSV*PQ 363
           G + R +ER  GV    + +  + R    LT   H+LG + +R+  L+ A          
Sbjct: 245 GYAARAIERAGGVSERCQTNREIRRSNDLLTAIRHELGRIFDRLGELFAAKIGQLRQRQA 304

Query: 364 RVDASLEPGHRDCEAHGVRP-EVHNLYSQEVIPGILPGDSRCC*RTRVAGTDCNWMNHGT 540
           R +A+ EP  R  E    R  E         + G L  D+R   R R    +  W NHGT
Sbjct: 305 RPEAAREPNWRYFEGDARRQLEADRADHAAALRGRLM-DARADVRNR----ETWWKNHGT 359

Query: 541 TRF 549
             F
Sbjct: 360 EEF 362

>TBCE_XENLA (Q5U508) Tubulin-specific chaperone E (Tubulin-folding cofactor E)|
          Length = 522

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
 Frame = -2

Query: 462 SGNNFLRVKIVNFGSDTVSLTISVSGLQASIN---ALGSNATVLTS-SNVKDENSFSNPT 295
           +G +F+R+K  NFG D ++      GL++  N    +G     L    ++++E S  N  
Sbjct: 65  TGGSFIRLKKANFGVDFLAALRKRYGLKSEQNEELVIGKKTVELVGFESIQEEQSKLNKL 124

Query: 294 KVVPVTS-QLHNAAEQMQVTLAAHSFSSFDLA 202
           K V +    + NA E+ Q+  +  +  + DL+
Sbjct: 125 KDVSLRECAVSNAGEKGQICHSCPNIMTADLS 156

>CSH1_MOUSE (P18121) Chorionic somatomammotropin hormone 1 precursor (Placental|
           lactogen I) (PL-I)
          Length = 224

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
 Frame = -2

Query: 411 VSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQLHNAAEQMQVT-- 238
           + LT+++SG      + G    +L SS +  EN  S PT +VP        AE +  T  
Sbjct: 1   MQLTLNLSG------SAGMQLLLLVSSLLLWENVSSKPTAMVPTEDLYTRLAELLHNTFI 54

Query: 237 LAAHSFSSFDL 205
           LAA  +  FDL
Sbjct: 55  LAADVYREFDL 65

>ABF1_STRCX (P82593) Alpha-N-arabinofuranosidase 1 precursor (EC 3.2.1.55)|
           (Alpha-N-arabinofuranosidase I) (Arabinosidase I)
           (Alpha-N-AFase I)
          Length = 825

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -2

Query: 645 NDNDQTWNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIHP 523
           N++   W PD + FN+   + + +Y +QK F  + G  + P
Sbjct: 506 NEDYVQWRPDLVWFNNRASWNSANYEVQKLFMNNVGDRVVP 546

>MOAA_PYRHO (O57854) Probable molybdenum cofactor biosynthesis protein A|
          Length = 310

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +1

Query: 550 AEKLLHPVTRSSVLLPGVEDDSIW 621
           A KL +PV  + V++ GV DD IW
Sbjct: 142 ATKLFYPVKLNMVVMKGVNDDEIW 165

>RY44_DROME (Q24498) Ryanodine receptor 44F|
          Length = 5127

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 7/34 (20%)
 Frame = +1

Query: 220  EGVGSERDLH-------LFRGVMQLTCHGHDLGW 300
            EG   E+++H       LFR + QLTC GH+L W
Sbjct: 3997 EGAAGEKNMHDAEFTCALFRFI-QLTCEGHNLEW 4029

>C12AA_BACTU (Q45754) Pesticidal crystal protein cry12Aa (Insecticidal|
           delta-endotoxin CryXIIA(a)) (Crystaline entomocidal
           protoxin) (142 kDa crystal protein)
          Length = 1257

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 15/68 (22%), Positives = 38/68 (55%)
 Frame = -2

Query: 432 VNFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQLHNAAE 253
           V++G D+V+  ++ + + A+I +    +  +TS ++ ++N+F   T    ++++L N   
Sbjct: 697 VDYGKDSVADGLNFNKITATIPSDAWYSGTITSMHLFNDNNFKTITPKFELSNELENITT 756

Query: 252 QMQVTLAA 229
           Q+    A+
Sbjct: 757 QVNALFAS 764


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,031,645
Number of Sequences: 219361
Number of extensions: 1739301
Number of successful extensions: 4574
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4567
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6029593548
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)