ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd22b13 |
|---|---|
| Clone Library Name | barley_pub |
>SUI1_MAIZE (P56330) Protein translation factor SUI1 homolog (GOS2 protein)| Length = 115 Score = 202 bits (513), Expect = 1e-51 Identities = 101/115 (87%), Positives = 102/115 (88%) Frame = -2 Query: 595 MSDLDVQIPTAFDPFXXXXXXXXXXXXGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 416 MSDLD+QIPTAFDPF GSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 60 Query: 415 ILKDLKKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 251 ILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF Sbjct: 61 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
>SUI1_SPOST (Q9SM41) Protein translation factor SUI1 homolog| Length = 115 Score = 201 bits (510), Expect = 2e-51 Identities = 100/115 (86%), Positives = 102/115 (88%) Frame = -2 Query: 595 MSDLDVQIPTAFDPFXXXXXXXXXXXXGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 416 MSDLD+QIPTAFDPF GSKDYVHVRIQQRNGRKSLTTVQGLKKEFSY+K Sbjct: 1 MSDLDIQIPTAFDPFSEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60 Query: 415 ILKDLKKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 251 ILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF Sbjct: 61 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
>SUI1_ORYSA (P33278) Protein translation factor SUI1 homolog (GOS2 protein)| Length = 115 Score = 201 bits (510), Expect = 2e-51 Identities = 100/115 (86%), Positives = 102/115 (88%) Frame = -2 Query: 595 MSDLDVQIPTAFDPFXXXXXXXXXXXXGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 416 MSDLD+QIPTAFDPF GSKDYVHVRIQQRNGRKSLTTVQGLKKEFSY+K Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60 Query: 415 ILKDLKKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 251 ILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF Sbjct: 61 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
>SUI12_ARATH (Q94JV4) Protein translation factor SUI1 homolog 2| Length = 113 Score = 184 bits (468), Expect = 2e-46 Identities = 90/115 (78%), Positives = 101/115 (87%) Frame = -2 Query: 595 MSDLDVQIPTAFDPFXXXXXXXXXXXXGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 416 MSDL+VQ+PTAFDPF +K+YVH+R+QQRNGRKSLTTVQGLKKE+SYSK Sbjct: 1 MSDLEVQVPTAFDPFADANAEDSGAG--TKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSK 58 Query: 415 ILKDLKKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 251 ILKDLKKEFCCNGTVVQD+ELGQVIQLQGDQRKNVS FLVQAG+VKK++IKIHGF Sbjct: 59 ILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
>SUI11_ARATH (P41568) Protein translation factor SUI1 homolog 1| Length = 113 Score = 181 bits (459), Expect = 2e-45 Identities = 88/115 (76%), Positives = 100/115 (86%) Frame = -2 Query: 595 MSDLDVQIPTAFDPFXXXXXXXXXXXXGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 416 MS+LD Q+PTAFDPF +K+YVH+R+QQRNGRKSLTTVQGLKKE+SY+K Sbjct: 1 MSELDSQVPTAFDPFADANAEDSGAG--TKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTK 58 Query: 415 ILKDLKKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 251 ILKDLKKEFCCNGTVVQD+ELGQVIQLQGDQRKNVS FLVQAG+VKK++IKIHGF Sbjct: 59 ILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
>SUI1_SALBA (O48650) Protein translation factor SUI1 homolog| Length = 113 Score = 179 bits (455), Expect = 6e-45 Identities = 90/115 (78%), Positives = 98/115 (85%) Frame = -2 Query: 595 MSDLDVQIPTAFDPFXXXXXXXXXXXXGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 416 MS+ D IPTAFDPF +KDYVHVR+QQRNGRKSLTTVQGLKK++SY+K Sbjct: 1 MSEFDNAIPTAFDPFAEANAEDSGAG--TKDYVHVRVQQRNGRKSLTTVQGLKKDYSYNK 58 Query: 415 ILKDLKKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 251 ILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVS+FLVQAGIVKKE+IKIHGF Sbjct: 59 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSSFLVQAGIVKKENIKIHGF 113
>SUI1_BRAOL (Q9SQF4) Protein translation factor SUI1 homolog (Translation| initiation factor nps45) Length = 113 Score = 179 bits (453), Expect = 1e-44 Identities = 87/115 (75%), Positives = 99/115 (86%) Frame = -2 Query: 595 MSDLDVQIPTAFDPFXXXXXXXXXXXXGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 416 MS+LD Q+PTAFDPF +K+YVH+R+QQRNGRKSLTTVQGLKKE+SY+K Sbjct: 1 MSELDSQVPTAFDPFADANAEDSGAG--TKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTK 58 Query: 415 ILKDLKKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 251 ILKDLKKEFCCNGTVVQD+ELGQVIQLQGDQRKNVS FLVQAG+VKK+ I+IHGF Sbjct: 59 ILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDDIQIHGF 113
>SUI1_PIMBR (O82569) Protein translation factor SUI1 homolog| Length = 113 Score = 166 bits (421), Expect = 5e-41 Identities = 82/115 (71%), Positives = 91/115 (79%) Frame = -2 Query: 595 MSDLDVQIPTAFDPFXXXXXXXXXXXXGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 416 M D D+QIPT+FDPF +K+YVH+RIQQRNGRKSLTTVQGLKKE SY K Sbjct: 1 MVDSDIQIPTSFDPFAEAEITDATGS--TKEYVHIRIQQRNGRKSLTTVQGLKKELSYDK 58 Query: 415 ILKDLKKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 251 ILKDLKK CCNGTVV D ELG+VIQLQGDQRKNVS F+VQAGIVKK+ IK+H F Sbjct: 59 ILKDLKKALCCNGTVVNDKELGKVIQLQGDQRKNVSTFIVQAGIVKKDQIKVHNF 113
>EIF1B_PIG (P61220) Eukaryotic translation initiation factor 1b (eIF1b)| (Protein translation factor SUI1 homolog GC20) Length = 113 Score = 129 bits (323), Expect = 1e-29 Identities = 58/110 (52%), Positives = 80/110 (72%) Frame = -2 Query: 580 VQIPTAFDPFXXXXXXXXXXXXGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDL 401 +Q +FDPF G++DY+H+RIQQRNGRK+LTTVQG+ ++ K++K Sbjct: 4 IQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAF 63 Query: 400 KKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 251 KK+F CNGTV++ E G+VIQLQGDQRKN+ FL++ GIVK+E +K+HGF Sbjct: 64 KKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
>EIF1B_MOUSE (Q9CXU9) Eukaryotic translation initiation factor 1b (eIF1b)| Length = 113 Score = 129 bits (323), Expect = 1e-29 Identities = 58/110 (52%), Positives = 80/110 (72%) Frame = -2 Query: 580 VQIPTAFDPFXXXXXXXXXXXXGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDL 401 +Q +FDPF G++DY+H+RIQQRNGRK+LTTVQG+ ++ K++K Sbjct: 4 IQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAF 63 Query: 400 KKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 251 KK+F CNGTV++ E G+VIQLQGDQRKN+ FL++ GIVK+E +K+HGF Sbjct: 64 KKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
>EIF1B_MACFA (Q4R4X9) Eukaryotic translation initiation factor 1b (eIF1b)| Length = 113 Score = 129 bits (323), Expect = 1e-29 Identities = 58/110 (52%), Positives = 80/110 (72%) Frame = -2 Query: 580 VQIPTAFDPFXXXXXXXXXXXXGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDL 401 +Q +FDPF G++DY+H+RIQQRNGRK+LTTVQG+ ++ K++K Sbjct: 4 IQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAF 63 Query: 400 KKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 251 KK+F CNGTV++ E G+VIQLQGDQRKN+ FL++ GIVK+E +K+HGF Sbjct: 64 KKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
>EIF1B_HUMAN (O60739) Eukaryotic translation initiation factor 1b (eIF1b)| (Protein translation factor SUI1 homolog GC20) Length = 113 Score = 129 bits (323), Expect = 1e-29 Identities = 58/110 (52%), Positives = 80/110 (72%) Frame = -2 Query: 580 VQIPTAFDPFXXXXXXXXXXXXGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDL 401 +Q +FDPF G++DY+H+RIQQRNGRK+LTTVQG+ ++ K++K Sbjct: 4 IQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAF 63 Query: 400 KKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 251 KK+F CNGTV++ E G+VIQLQGDQRKN+ FL++ GIVK+E +K+HGF Sbjct: 64 KKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
>EIF1_PONPY (Q5RFF4) Eukaryotic translation initiation factor 1 (eIF1) (Protein| translation factor SUI1 homolog) Length = 113 Score = 125 bits (313), Expect = 2e-28 Identities = 55/105 (52%), Positives = 76/105 (72%) Frame = -2 Query: 565 AFDPFXXXXXXXXXXXXGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFC 386 +FDPF G++DY+H+RIQQRNGRK+LTTVQG+ ++ K++K KK+F Sbjct: 9 SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68 Query: 385 CNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 251 CNGTV++ E G+VIQLQGDQRKN+ FLV+ G+ K + +K+HGF Sbjct: 69 CNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
>EIF1_HUMAN (P41567) Eukaryotic translation initiation factor 1 (eIF1) (Protein| translation factor SUI1 homolog) (Sui1iso1) (A121) Length = 113 Score = 125 bits (313), Expect = 2e-28 Identities = 55/105 (52%), Positives = 76/105 (72%) Frame = -2 Query: 565 AFDPFXXXXXXXXXXXXGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFC 386 +FDPF G++DY+H+RIQQRNGRK+LTTVQG+ ++ K++K KK+F Sbjct: 9 SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68 Query: 385 CNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 251 CNGTV++ E G+VIQLQGDQRKN+ FLV+ G+ K + +K+HGF Sbjct: 69 CNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
>EIF1_BOVIN (Q5E938) Eukaryotic translation initiation factor 1 (eIF1) (Protein| translation factor SUI1 homolog) Length = 113 Score = 125 bits (313), Expect = 2e-28 Identities = 55/105 (52%), Positives = 76/105 (72%) Frame = -2 Query: 565 AFDPFXXXXXXXXXXXXGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFC 386 +FDPF G++DY+H+RIQQRNGRK+LTTVQG+ ++ K++K KK+F Sbjct: 9 SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68 Query: 385 CNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 251 CNGTV++ E G+VIQLQGDQRKN+ FLV+ G+ K + +K+HGF Sbjct: 69 CNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
>EIF1_MOUSE (P48024) Eukaryotic translation initiation factor 1 (eIF1) (Protein| translation factor SUI1 homolog) Length = 113 Score = 124 bits (312), Expect = 2e-28 Identities = 54/105 (51%), Positives = 76/105 (72%) Frame = -2 Query: 565 AFDPFXXXXXXXXXXXXGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFC 386 +FDPF G++DY+H+RIQQRNGRK+LTTVQG+ ++ K++K KK+F Sbjct: 9 SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68 Query: 385 CNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 251 CNGTV++ E G+VIQLQGDQRKN+ FL++ G+ K + +K+HGF Sbjct: 69 CNGTVIEHPEYGEVIQLQGDQRKNICQFLIEIGLAKDDQLKVHGF 113
>SUI1_ANOGA (P42678) Protein translation factor SUI1 homolog| Length = 110 Score = 114 bits (286), Expect = 2e-25 Identities = 54/112 (48%), Positives = 73/112 (65%) Frame = -2 Query: 586 LDVQIPTAFDPFXXXXXXXXXXXXGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILK 407 + +Q FDPF VH+RIQQRNGRK+LTTVQGL E+ KI++ Sbjct: 1 MSIQNLNTFDPFADAIKGADYDVQDG--LVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVR 58 Query: 406 DLKKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 251 KKEF CNGTV++ E G+V+QLQGDQR+N+ +L ++G+ K E +K+HGF Sbjct: 59 ACKKEFACNGTVIEHPEYGEVLQLQGDQRENICQWLTKSGLAKPEQLKVHGF 110
>SUI1_YEAST (P32911) Protein translation factor SUI1| Length = 108 Score = 114 bits (285), Expect = 3e-25 Identities = 53/105 (50%), Positives = 75/105 (71%) Frame = -2 Query: 565 AFDPFXXXXXXXXXXXXGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFC 386 +FDPF + +Y+H+RIQQRNGRK+LTTVQG+ +E+ +ILK LKK+F Sbjct: 8 SFDPFADTGDDETA----TSNYIHIRIQQRNGRKTLTTVQGVPEEYDLKRILKVLKKDFA 63 Query: 385 CNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 251 CNG +V+D E+G++IQLQGDQR V F++ ++K++IKIHGF Sbjct: 64 CNGNIVKDPEMGEIIQLQGDQRAKVCEFMISQLGLQKKNIKIHGF 108
>SUI1_ASHGO (Q755R1) Protein translation factor SUI1| Length = 108 Score = 114 bits (285), Expect = 3e-25 Identities = 54/105 (51%), Positives = 74/105 (70%) Frame = -2 Query: 565 AFDPFXXXXXXXXXXXXGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFC 386 +FDPF S +Y+H+RIQQRNGRK+LTTVQG+ +E+ +ILK L+K+F Sbjct: 8 SFDPFADTGDDEAS----SSNYIHIRIQQRNGRKTLTTVQGIPEEYDLKRILKVLRKDFG 63 Query: 385 CNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 251 CNG +V+D E+G++IQLQGDQR V FL+ + K++IKIHGF Sbjct: 64 CNGNMVKDDEMGEIIQLQGDQRAKVCEFLITQLAIPKKNIKIHGF 108
>SUI1_SCHPO (P79060) Protein translation factor sui1| Length = 109 Score = 113 bits (282), Expect = 7e-25 Identities = 53/83 (63%), Positives = 68/83 (81%) Frame = -2 Query: 499 VHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGDQR 320 +H+RIQQRNGRK+LTTVQGL +EF +IL+ LKK+F CNGT+V+D +LG+VIQLQGDQR Sbjct: 27 IHIRIQQRNGRKTLTTVQGLPREFDQKRILRALKKDFACNGTIVKDDDLGEVIQLQGDQR 86 Query: 319 KNVSNFLVQAGIVKKEHIKIHGF 251 V FL Q ++K++IKIHGF Sbjct: 87 IKVMEFLTQQLGLQKKNIKIHGF 109
>SUI1_DROME (Q9VZS3) Protein translation factor SUI1 homolog| Length = 110 Score = 112 bits (279), Expect = 1e-24 Identities = 48/83 (57%), Positives = 65/83 (78%) Frame = -2 Query: 499 VHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGDQR 320 VH+RIQQRNGRK+LTTVQGL E+ KI++ KKEF CNGTV++ E G+V+QLQGDQR Sbjct: 28 VHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRSCKKEFACNGTVIEHPEYGEVLQLQGDQR 87 Query: 319 KNVSNFLVQAGIVKKEHIKIHGF 251 +N+ +L + G+ K + +K+HGF Sbjct: 88 ENICQWLTKVGLAKPDQLKVHGF 110
>EIF1_CHICK (P51971) Eukaryotic translation initiation factor 1 (eIF1) (Protein| translation factor SUI1 homolog) (Fragment) Length = 79 Score = 105 bits (263), Expect = 1e-22 Identities = 46/79 (58%), Positives = 62/79 (78%) Frame = -2 Query: 487 IQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGDQRKNVS 308 IQQRNGRK+LTTVQG+ ++ K++K KK+F CNGTV++ E G+VIQLQGDQRKN+ Sbjct: 1 IQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNIC 60 Query: 307 NFLVQAGIVKKEHIKIHGF 251 FLV+ G+ K + +K+HGF Sbjct: 61 QFLVEIGLAKDDQLKVHGF 79
>SUI1_THEVO (Q97BW9) Protein translation factor SUI1 homolog| Length = 100 Score = 43.9 bits (102), Expect = 5e-04 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Frame = -2 Query: 499 VHVRIQQRNGRKSLTTVQGLKKEFS-YSKILKDLKKEFCCNGTVVQDTELGQVIQLQGDQ 323 V + + +R K +T ++G+ + KI K+LKK+ GTV + G++I+LQGD Sbjct: 26 VKIVVDKRRYGKFVTIIEGIDPKIEDIEKIAKELKKKVASGGTVKE----GRIIELQGDH 81 Query: 322 RKNVSNFLVQAG 287 R+ V FL G Sbjct: 82 RQEVKKFLEDMG 93
>SUI1_HALMA (Q5UZP9) Protein translation factor SUI1 homolog| Length = 97 Score = 42.4 bits (98), Expect = 0.001 Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Frame = -2 Query: 499 VHVRIQQRNGRKSLTTVQGLK-KEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGDQ 323 +++RI +R K +T ++G K+ + DLK +F C GTV E GQ I+LQG+ Sbjct: 27 INIRIDERRYGKEVTIIEGFDPKDVDMDSLSSDLKSKFACGGTV----EDGQ-IELQGNH 81 Query: 322 RKNVSNFLVQAG 287 V +FL G Sbjct: 82 TGRVEDFLRDKG 93
>SUI1_HALSA (Q9HME3) Protein translation factor SUI1 homolog| Length = 97 Score = 42.0 bits (97), Expect = 0.002 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Frame = -2 Query: 499 VHVRIQQRNGRKSLTTVQGLK-KEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGDQ 323 + +RI +R K +T ++G K+ + DLK +F C GT V+D E I+LQG+ Sbjct: 27 IEIRIDERRYGKEVTVIEGFDPKDVDLDSLSSDLKSKFACGGT-VEDGE----IELQGNH 81 Query: 322 RKNVSNFLVQAG 287 V +FL G Sbjct: 82 SGRVEDFLRNKG 93
>SUI1_PYRFU (Q8U006) Protein translation factor SUI1 homolog| Length = 98 Score = 40.4 bits (93), Expect = 0.006 Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 3/77 (3%) Frame = -2 Query: 508 KDYVHVRIQQRNGR--KSLTTVQGL-KKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQ 338 K+ +R+ R K T ++G+ +KEF +I K LK + C GT I+ Sbjct: 18 KEQQRIRVYTERARYGKIKTIIEGIDEKEFDLEEIAKKLKAKLACGGTAKNGR-----IE 72 Query: 337 LQGDQRKNVSNFLVQAG 287 LQGD R + LV+ G Sbjct: 73 LQGDHRDRIKKLLVELG 89
>SUI1_PYRHO (P58193) Protein translation factor SUI1 homolog| Length = 99 Score = 38.9 bits (89), Expect = 0.016 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Frame = -2 Query: 499 VHVRIQQRNGRKSLTTVQGL-KKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGDQ 323 + V I++ K T ++G+ +KEF +I K LK + C GT I+LQGD Sbjct: 24 IKVYIERARYGKVKTIIEGIDEKEFDLEEIAKKLKAKLACGGTAKNGR-----IELQGDH 78 Query: 322 RKNVSNFLVQAG 287 R + L + G Sbjct: 79 RDRIKKLLAELG 90
>SUI1_PYRAB (Q9V1U3) Protein translation factor SUI1 homolog| Length = 99 Score = 38.9 bits (89), Expect = 0.016 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 3/77 (3%) Frame = -2 Query: 508 KDYVHVRIQQRNGR--KSLTTVQGL-KKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQ 338 K+ +R+ R K T ++G+ +KEF +I K LK + C GT I+ Sbjct: 19 KEQQRIRVYTERARYGKIKTIIEGIDEKEFDLEEIAKKLKAKLACGGTAKNGR-----IE 73 Query: 337 LQGDQRKNVSNFLVQAG 287 LQGD R + L + G Sbjct: 74 LQGDHRDRIKKLLAELG 90
>SUI1_PYRKO (Q5JDH7) Protein translation factor SUI1 homolog| Length = 98 Score = 38.5 bits (88), Expect = 0.021 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Frame = -2 Query: 499 VHVRIQQRNGRKSLTTVQGL-KKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGDQ 323 + V +++ K T ++G+ +KEF I K LK + C GT I+LQGD Sbjct: 23 IRVYVERARYGKLKTIIEGIDEKEFDLEDIAKKLKAKLACGGTAKNGR-----IELQGDH 77 Query: 322 RKNVSNFLVQAG 287 R V L + G Sbjct: 78 RDRVKKLLAELG 89
>Y546_SYNY3 (Q55397) Hypothetical protein sll0546| Length = 111 Score = 37.7 bits (86), Expect = 0.036 Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Frame = -2 Query: 496 HVRIQQ-RNGRK--SLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGD 326 +VRIQ R+GRK ++T V GL+ + L K FC +G +++ +++QGD Sbjct: 35 NVRIQATRSGRKGKTVTVVSGLQLSAMGQQALLKALKSFCGSGGTLKE----DCVEIQGD 90 Query: 325 QRKNVSNFLVQAGIVKK 275 QR+ + +L++ G K Sbjct: 91 QREKILAYLLKQGYKAK 107
>SUI1_METMA (Q8PYK3) Protein translation factor SUI1 homolog| Length = 102 Score = 35.4 bits (80), Expect = 0.18 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 1/80 (1%) Frame = -2 Query: 499 VHVRIQQRNGRKSLTTVQGLK-KEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGDQ 323 + V++ +R K +T V+G E ++ LK +F C GTV G ++LQG+ Sbjct: 28 ITVKVNRRRYGKEVTVVEGFDASEIDLHELSTYLKSKFACGGTV-----KGNTVELQGNH 82 Query: 322 RKNVSNFLVQAGIVKKEHIK 263 + L++ G E IK Sbjct: 83 LTRMKEVLMEKGF-SAEQIK 101
>SUI1_METAC (Q8TIT3) Protein translation factor SUI1 homolog| Length = 102 Score = 35.4 bits (80), Expect = 0.18 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 1/80 (1%) Frame = -2 Query: 499 VHVRIQQRNGRKSLTTVQGLK-KEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGDQ 323 + V++ +R K +T V+G E ++ LK +F C GTV G ++LQG+ Sbjct: 28 ITVKVNRRRYGKEVTVVEGFDASEIDLHELSTYLKSKFACGGTV-----KGNTVELQGNH 82 Query: 322 RKNVSNFLVQAGIVKKEHIK 263 + L++ G E IK Sbjct: 83 LARMKEVLMEKGF-SAEQIK 101
>DENR_SCHPO (O42929) Density-regulated protein homolog| Length = 190 Score = 33.5 bits (75), Expect = 0.67 Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%) Frame = -2 Query: 499 VHVRIQQRNGRKSLTTVQGLKK-EFSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGDQ 323 V ++ +R RK +TTVQGL K K L +F +V + + I +QGD Sbjct: 99 VLIKTIERTKRKRVTTVQGLDAFGIETKKAAKMLANKFATGASVTKTADKKDEIVVQGDL 158 Query: 322 RKNVSNFLVQA-GIVKKEHIKI 260 ++ +F+++ V +++IKI Sbjct: 159 NYDIFDFILEKFKEVPEDNIKI 180
>SUI1_METKA (Q8TX33) Protein translation factor SUI1 homolog| Length = 106 Score = 33.5 bits (75), Expect = 0.67 Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%) Frame = -2 Query: 499 VHVRIQQRNGRKSLTTVQGLKKE-FSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGDQ 323 + + +Q K +T ++GL ++ LK+E C GT + G++I LQGD Sbjct: 30 IKIYTEQVRPGKVVTIIEGLDDAGIDLQELASKLKRECACGGTAKE----GKII-LQGDH 84 Query: 322 RKNVSNFLVQAGIVKKEHIKI 260 R V FL++ ++ I++ Sbjct: 85 RNKVREFLIKKEGFSEDAIEV 105
>YCIH_SALTY (P0A2G7) Protein yciH| Length = 108 Score = 32.7 bits (73), Expect = 1.2 Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 4/77 (5%) Frame = -2 Query: 493 VRIQ-QRNGRKS--LTTVQGLK-KEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGD 326 VRIQ Q +GRK + + G++ + +K+ +LKK+ C G V + +I++QGD Sbjct: 33 VRIQRQTSGRKGKGVCLITGIEMNDAELTKLAAELKKKCGCGGAVKEG-----IIEIQGD 87 Query: 325 QRKNVSNFLVQAGIVKK 275 +R + + L G+ K Sbjct: 88 KRDLIKSLLEAKGMKVK 104
>YCIH_SALTI (P0A2G8) Protein yciH| Length = 108 Score = 32.7 bits (73), Expect = 1.2 Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 4/77 (5%) Frame = -2 Query: 493 VRIQ-QRNGRKS--LTTVQGLK-KEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGD 326 VRIQ Q +GRK + + G++ + +K+ +LKK+ C G V + +I++QGD Sbjct: 33 VRIQRQTSGRKGKGVCLITGIEMNDAELTKLAAELKKKCGCGGAVKEG-----IIEIQGD 87 Query: 325 QRKNVSNFLVQAGIVKK 275 +R + + L G+ K Sbjct: 88 KRDLIKSLLEAKGMKVK 104
>TSP2_BOVIN (Q95116) Thrombospondin-2 precursor (Corticotropin-induced secreted| protein) (CISP) Length = 1170 Score = 30.4 bits (67), Expect = 5.7 Identities = 38/142 (26%), Positives = 51/142 (35%), Gaps = 15/142 (10%) Frame = -1 Query: 587 SRRSDPNCL*PLC----RGECWGRWCSCRIK---GLRACTHPAA*WSQEPDHCPGSEEGV 429 S R C P C R W W +C + G+R T S EP H G ++ V Sbjct: 477 SGRETKACQGPPCPVDGRWSPWSPWSACTVTCAGGIRERTRVCN--SPEPQH--GGKDCV 532 Query: 428 QLQQDPQRPQERVLLQWYSCPGHRTWTGHSTPG*SEEERLKLP--------CPGGHCEEG 273 ++ Q + SCP + PG E P CPGG G Sbjct: 533 GGAKEQQMCNRK------SCPIDGCLSNPCFPG---AECSSFPDGSWSCGSCPGGFLGNG 583 Query: 272 THQDSWFLSNCQLLIRVCMQSS 207 TH + L C ++ VC +S Sbjct: 584 THCED--LDECAVVTDVCFATS 603
>TRPE_PSEPU (P20579) Anthranilate synthase component 1 (EC 4.1.3.27)| (Anthranilate synthase component I) Length = 493 Score = 30.4 bits (67), Expect = 5.7 Identities = 21/83 (25%), Positives = 43/83 (51%) Frame = +2 Query: 296 DKEV*DVLPLITLELNDLSKFCVLDNCTIAAKLFLEVFEDLAVAELLLQTLDSGQALATI 475 DKE+ + L LI L ND+ + + + K+ +E + ++ + + + +GQ + Sbjct: 330 DKEIAEHLMLIDLGRNDVGRVSSTGSVRLTEKMVIERYSNV----MHIVSNVAGQLREGL 385 Query: 476 TLLDAYMHVVL*SGSCTSVPSIR 544 T +DA + +L +G+ + P IR Sbjct: 386 TAMDA-LRAILPAGTLSGAPKIR 407
>YCIH_ECOLI (P08245) Protein yciH| Length = 108 Score = 30.0 bits (66), Expect = 7.5 Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 4/77 (5%) Frame = -2 Query: 493 VRIQ-QRNGRKS--LTTVQGLK-KEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGD 326 VRIQ Q +GRK + + G+ + +K+ +LKK+ C G V VI++QGD Sbjct: 33 VRIQRQTSGRKGKGVCLITGVDLDDAELTKLAAELKKKCGCGGAVKDG-----VIEIQGD 87 Query: 325 QRKNVSNFLVQAGIVKK 275 +R + + L G+ K Sbjct: 88 KRDLLKSLLEAKGMKVK 104 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 102,199,271 Number of Sequences: 219361 Number of extensions: 2176681 Number of successful extensions: 5801 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 5550 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5790 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7366267610 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
