Clone Name | rbasd22b13 |
---|---|
Clone Library Name | barley_pub |
>gb|AF508969.1| Triticum aestivum translation initiation factor mRNA, complete cds Length = 742 Score = 1065 bits (537), Expect = 0.0 Identities = 675/715 (94%), Gaps = 11/715 (1%) Strand = Plus / Minus Query: 8 tattattnaaccttgatgggagagggtaacaagccatctaacgatggtgctccttacaaa 67 ||||| | |||||||| |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 720 tattactcaaccttgacgggagagggtaacaagccatctaaagatggtgctccttacaaa 661 Query: 68 gcttcaacacaacggtagtaagcatatacgcacgcagagaggtgg-ctatgctagacttt 126 | ||||||||||||||| ||||||| ||||| |||||||||| |||||||||| ||| Sbjct: 660 gtttcaacacaacggtaacaagcatacacgca---agagaggtggactatgctagatttt 604 Query: 127 gtgtatactcagaaggcgcaagc--gtggcgcctgctagcgctagcacacaactaaatat 184 |||||||||||| |||||||| || ||||||||||||||||||||||||||||||| Sbjct: 603 ctgtatactcagagcgcgcaagctggtaacgcctgctagcgctagcacacaactaaatat 544 Query: 185 actgcaccaccaatatatattagctgctttgcatgcagactctgataaggagctggcagt 244 ||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||| Sbjct: 543 actgcaccaccaatatata---gctgctttgcatgtagactctgatatggagctggcagt 487 Query: 245 tgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaa 304 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 486 tgctcagaaaccatgaatcttgatgtgttccttcttcacaatgccggcctggacaaggaa 427 Query: 305 gtttgagacgttcttcctctgatcaccctggagttgaatgacctgtccaagttctgtgtc 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 gtttgagacgttcttcctctgatcaccctggagttgaatgacctgtccaagttctgtgtc 367 Query: 365 ctggacaactgtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctgta 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 ctggacaactgtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctgta 307 Query: 425 gctgaactccttcttcagaccctggacagtggtcaggctcttgcgaccattacgctgctg 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 306 gctgaactccttcttcagaccctggacagtggtcaggctcttgcgaccattacgctgctg 247 Query: 485 gatgcgtacatgcacgtagtcctttgatccggcagctgcaccagcgtccccagcattcgc 544 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 246 gatgcgtacatgaacgtagtcttttgatccggcagctgcaccagcgtccccagcattcgc 187 Query: 545 ctcggcaaaggggtcaaaggcagttgggatctgaacgtcgagatcagacatgaaaactcc 604 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 186 ctcggcaaaggggtcaaaggcagttgggatctgaacgtcaagatcagacatgaaatctcc 127 Query: 605 tggtgagagtggcaaaagctacaccaagaacctcggaggcggtagaggaggaagagatca 664 || ||||| ||||||||||| |||||||||||| ||||||||| |||||||||||||||| Sbjct: 126 tgctgagactggcaaaagctgcaccaagaacctgggaggcggtcgaggaggaagagatca 67 Query: 665 gccaagaacttctcccgggaagatttggatcgcggagaggcgcctggtagtgagt 719 |||||| ||| |||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 66 accaagatctt-tcccgggaggatttggatcgcggagaggcg-ctggtagtgagt 14
>gb|AF034944.1|AF034944 Zea mays translation initiation factor GOS2 (TIF) mRNA, complete cds Length = 759 Score = 519 bits (262), Expect = e-144 Identities = 411/456 (90%), Gaps = 6/456 (1%) Strand = Plus / Minus Query: 243 gttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaagg 302 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||| Sbjct: 488 gttgctcagaaaccatgaatcttgatgtgctccttcttcacaatgccggcctggacgagg 429 Query: 303 aagtttgagacgttcttcctctgatcaccctggagttgaatgacctgtccaagttctgtg 362 || || ||||||||||||||||||||||||||||| |||||||||||||||||||||| | Sbjct: 428 aaattcgagacgttcttcctctgatcaccctggagctgaatgacctgtccaagttctggg 369 Query: 363 tcctggacaactgtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctg 422 |||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 368 tcctggaccactgtaccattgcagcagaactctttcttgagatctttgaggatcttgctg 309 Query: 423 tagctgaactccttcttcagaccctggacagtggtcaggctcttgcgaccattacgctgc 482 ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 308 tagctgaactccttcttcaatccctggacggtggtcaggctcttgcgaccattacgctgc 249 Query: 483 tggatgcgtacatgcacgtagtcctttgatccggcagctgcaccagcgtccccagcattc 542 |||||||| || || |||||||||||||| || || || ||||||| |||||||||||| Sbjct: 248 tggatgcgcacgtgtacgtagtcctttgaccctgctgccgcaccagagtccccagcattg 189 Query: 543 gcctcggcaaaggggtcaaaggcagttgggatctgaacgtcgagatcagacatgaaaact 602 ||||| || ||||| || ||||||||||||||||||| |||||||||||||||||||||| Sbjct: 188 gcctcagcgaagggatcgaaggcagttgggatctgaatgtcgagatcagacatgaaaact 129 Query: 603 --cctggtgagagtggcaaaagctacaccaagaacctcggaggcggt-agaggaggaaga 659 ||||||||||||| |||||||||||||| ||| ||||| ||| || |||||||| Sbjct: 128 tgattggtgagagtggc--aagctacaccaagagccttggaggtggtccgaagaggaaga 71 Query: 660 gatcagccaagaacttctcccgggaagatttggatc 695 | ||| |||||||| || | ||||||||| |||||| Sbjct: 70 ggtcaaccaagaac-tcgctcgggaagatgtggatc 36
>gb|BT016285.1| Zea mays clone Contig118 mRNA sequence Length = 861 Score = 511 bits (258), Expect = e-142 Identities = 410/456 (89%), Gaps = 6/456 (1%) Strand = Plus / Minus Query: 243 gttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaagg 302 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||| Sbjct: 598 gttgctcagaaaccatgaatcttgatgtgctccttcttcacaatgccggcctggacgagg 539 Query: 303 aagtttgagacgttcttcctctgatcaccctggagttgaatgacctgtccaagttctgtg 362 || || ||||||||||||||||||||||||||||| |||||||||||||||||||||| | Sbjct: 538 aaattcgagacgttcttcctctgatcaccctggagctgaatgacctgtccaagttctggg 479 Query: 363 tcctggacaactgtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctg 422 |||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 478 tcctggaccactgtaccattgcagcagaactctttcttgagatctttgaggatcttgctg 419 Query: 423 tagctgaactccttcttcagaccctggacagtggtcaggctcttgcgaccattacgctgc 482 ||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||| Sbjct: 418 tagctgaactccttcttcaatccctggacggtagtcaggctcttgcgaccattacgctgc 359 Query: 483 tggatgcgtacatgcacgtagtcctttgatccggcagctgcaccagcgtccccagcattc 542 |||||||| || || |||||||||||||| || || || ||||||| |||||||||||| Sbjct: 358 tggatgcgcacgtgtacgtagtcctttgaccctgctgccgcaccagagtccccagcattg 299 Query: 543 gcctcggcaaaggggtcaaaggcagttgggatctgaacgtcgagatcagacatgaaaact 602 ||||| || ||||| || ||||||||||||||||||| |||||||||||||||||||||| Sbjct: 298 gcctcagcgaagggatcgaaggcagttgggatctgaatgtcgagatcagacatgaaaact 239 Query: 603 --cctggtgagagtggcaaaagctacaccaagaacctcggaggcggt-agaggaggaaga 659 ||||||||||||| |||||||||||||| ||| ||||| ||| || |||||||| Sbjct: 238 tgattggtgagagtggc--aagctacaccaagagccttggaggtggtccgaagaggaaga 181 Query: 660 gatcagccaagaacttctcccgggaagatttggatc 695 | ||| |||||||| || | ||||||||| |||||| Sbjct: 180 ggtcaaccaagaac-tcgctcgggaagatgtggatc 146
>gb|AY103847.1| Zea mays PCO105184 mRNA sequence Length = 1006 Score = 511 bits (258), Expect = e-142 Identities = 410/456 (89%), Gaps = 6/456 (1%) Strand = Plus / Minus Query: 243 gttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaagg 302 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||| Sbjct: 716 gttgctcagaaaccatgaatcttgatgtgctccttcttcacaatgccggcctggacgagg 657 Query: 303 aagtttgagacgttcttcctctgatcaccctggagttgaatgacctgtccaagttctgtg 362 || || ||||||||||||||||||||||||||||| |||||||||||||||||||||| | Sbjct: 656 aaattcgagacgttcttcctctgatcaccctggagctgaatgacctgtccaagttctggg 597 Query: 363 tcctggacaactgtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctg 422 |||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 596 tcctggaccactgtaccattgcagcagaactctttcttgagatctttgaggatcttgctg 537 Query: 423 tagctgaactccttcttcagaccctggacagtggtcaggctcttgcgaccattacgctgc 482 ||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||| Sbjct: 536 tagctgaactccttcttcaatccctggacggtagtcaggctcttgcgaccattacgctgc 477 Query: 483 tggatgcgtacatgcacgtagtcctttgatccggcagctgcaccagcgtccccagcattc 542 |||||||| || || |||||||||||||| || || || ||||||| |||||||||||| Sbjct: 476 tggatgcgcacgtgtacgtagtcctttgaccctgctgccgcaccagagtccccagcattg 417 Query: 543 gcctcggcaaaggggtcaaaggcagttgggatctgaacgtcgagatcagacatgaaaact 602 ||||| || ||||| || ||||||||||||||||||| |||||||||||||||||||||| Sbjct: 416 gcctcagcgaagggatcgaaggcagttgggatctgaatgtcgagatcagacatgaaaact 357 Query: 603 --cctggtgagagtggcaaaagctacaccaagaacctcggaggcggt-agaggaggaaga 659 ||||||||||||| |||||||||||||| ||| ||||| ||| || |||||||| Sbjct: 356 tgattggtgagagtggc--aagctacaccaagagccttggaggtggtccgaagaggaaga 299 Query: 660 gatcagccaagaacttctcccgggaagatttggatc 695 | ||| |||||||| || | ||||||||| |||||| Sbjct: 298 ggtcaaccaagaac-tcgctcgggaagatgtggatc 264
>gb|AF380357.1|AF380357 Porteresia coarctata translational initiation factor eIF1 mRNA, complete cds Length = 773 Score = 509 bits (257), Expect = e-141 Identities = 391/432 (90%), Gaps = 4/432 (0%) Strand = Plus / Minus Query: 245 tgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaa 304 ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| || Sbjct: 506 tgctcagaaaccatgaatcttgatgtgttccttcttcacaatgccggcctgaacaagaaa 447 Query: 305 gtttgagacgttcttcctctgatcaccctggagttgaatgacctgtccaagttctgtgtc 364 ||||| ||||| ||||||||||||||||| |||||||||||||| ||||| |||| ||| Sbjct: 446 atttgatacgtttttcctctgatcaccctgaagttgaatgacctggccaagctctgggtc 387 Query: 365 ctggacaactgtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctgta 424 ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 386 ctggacaacagtaccattgcagcaaaactctttcttgagatctttgaggatcttgttgta 327 Query: 425 gctgaactccttcttcagaccctggacagtggtcaggctcttgcgaccattacgctgctg 484 |||||| |||||||||| ||||||||||||||||||||||| || |||||||||||||| Sbjct: 326 gctgaattccttcttcaatccctggacagtggtcaggctcttacggccattacgctgctg 267 Query: 485 gatgcgtacatgcacgtagtcctttgatccggcagctgcaccagcgtccccagcattcgc 544 |||||||||||| ||||||||||||||||| ||||| ||||||| ||| |||||||| || Sbjct: 266 gatgcgtacatgaacgtagtcctttgatcctgcagccgcaccagagtctccagcattggc 207 Query: 545 ctcggcaaaggggtcaaaggcagttgggatctgaacgtcgagatcagacatgaaa-actc 603 ||| |||||||| || ||||||||||||||||||| ||||||||||||||||||| | Sbjct: 206 ctcagcaaagggatcgaaggcagttgggatctgaatgtcgagatcagacatgaaactttg 147 Query: 604 ctggtgagagtggcaaaagctacaccaagaacctcggaggcggtagagga-ggaagagat 662 ||||||| |||||| |||||||||||||||||| ||||||||| | || ||||||||| Sbjct: 146 ctggtgaaagtggc--aagctacaccaagaacctgggaggcggtgtaagagggaagagat 89 Query: 663 cagccaagaact 674 || ||||||||| Sbjct: 88 caaccaagaact 77
>dbj|AK120697.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170I05, full insert sequence Length = 752 Score = 504 bits (254), Expect = e-139 Identities = 366/401 (91%), Gaps = 3/401 (0%) Strand = Plus / Minus Query: 238 tggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctgga 297 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 536 tggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgccggcctgaa 477 Query: 298 caaggaagtttgagacgttcttcctctgatcaccctggagttgaatgacctgtccaagtt 357 |||| || ||||| ||||| ||||||||||||||||| |||||||||||||| ||||| | Sbjct: 476 caagaaaatttgatacgtttttcctctgatcaccctgaagttgaatgacctggccaagct 417 Query: 358 ctgtgtcctggacaactgtaccattgcagcaaaactctttcttgaggtctttgaggatct 417 ||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 416 ctgggtcctggacaacagtaccattgcagcaaaactctttcttgagatctttgaggatct 357 Query: 418 tgctgtagctgaactccttcttcagaccctggacagtggtcaggctcttgcgaccattac 477 || |||||||||| |||||||||| ||||||||||||||||||||||| || ||||||| Sbjct: 356 tgttgtagctgaattccttcttcaatccctggacagtggtcaggctcttacggccattac 297 Query: 478 gctgctggatgcgtacatgcacgtagtcctttgatccggcagctgcaccagcgtccccag 537 ||||||||||||||||||| ||||||||||||||||| ||||| ||||||| ||| |||| Sbjct: 296 gctgctggatgcgtacatgaacgtagtcctttgatcctgcagccgcaccagagtctccag 237 Query: 538 cattcgcctcggcaaaggggtcaaaggcagttgggatctgaacgtcgagatcagacatga 597 |||| ||||| |||||||| || ||||||||||||||||||| ||||||||||||||||| Sbjct: 236 cattggcctcagcaaagggatcgaaggcagttgggatctgaatgtcgagatcagacatga 177 Query: 598 aa-actcctggtgagagtggcaaaagctacaccaagaacct 637 || | ||||||| |||||| |||||||||||||||||| Sbjct: 176 aactttgctggtgaaagtggc--aagctacaccaagaacct 138
>dbj|AK105037.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-C07, full insert sequence Length = 1275 Score = 504 bits (254), Expect = e-139 Identities = 366/401 (91%), Gaps = 3/401 (0%) Strand = Plus / Minus Query: 238 tggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctgga 297 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1059 tggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgccggcctgaa 1000 Query: 298 caaggaagtttgagacgttcttcctctgatcaccctggagttgaatgacctgtccaagtt 357 |||| || ||||| ||||| ||||||||||||||||| |||||||||||||| ||||| | Sbjct: 999 caagaaaatttgatacgtttttcctctgatcaccctgaagttgaatgacctggccaagct 940 Query: 358 ctgtgtcctggacaactgtaccattgcagcaaaactctttcttgaggtctttgaggatct 417 ||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 939 ctgggtcctggacaacagtaccattgcagcaaaactctttcttgagatctttgaggatct 880 Query: 418 tgctgtagctgaactccttcttcagaccctggacagtggtcaggctcttgcgaccattac 477 || |||||||||| |||||||||| ||||||||||||||||||||||| || ||||||| Sbjct: 879 tgttgtagctgaattccttcttcaatccctggacagtggtcaggctcttacggccattac 820 Query: 478 gctgctggatgcgtacatgcacgtagtcctttgatccggcagctgcaccagcgtccccag 537 ||||||||||||||||||| ||||||||||||||||| ||||| ||||||| ||| |||| Sbjct: 819 gctgctggatgcgtacatgaacgtagtcctttgatcctgcagccgcaccagagtctccag 760 Query: 538 cattcgcctcggcaaaggggtcaaaggcagttgggatctgaacgtcgagatcagacatga 597 |||| ||||| |||||||| || ||||||||||||||||||| ||||||||||||||||| Sbjct: 759 cattggcctcagcaaagggatcgaaggcagttgggatctgaatgtcgagatcagacatga 700 Query: 598 aa-actcctggtgagagtggcaaaagctacaccaagaacct 637 || | ||||||| |||||| |||||||||||||||||| Sbjct: 699 aactttgctggtgaaagtggc--aagctacaccaagaacct 661
>gb|AF094774.1|AF094774 Oryza sativa translation initiation factor (GOS2) mRNA, complete cds Length = 744 Score = 504 bits (254), Expect = e-139 Identities = 366/401 (91%), Gaps = 3/401 (0%) Strand = Plus / Minus Query: 238 tggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctgga 297 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 516 tggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgccggcctgaa 457 Query: 298 caaggaagtttgagacgttcttcctctgatcaccctggagttgaatgacctgtccaagtt 357 |||| || ||||| ||||| ||||||||||||||||| |||||||||||||| ||||| | Sbjct: 456 caagaaaatttgatacgtttttcctctgatcaccctgaagttgaatgacctggccaagct 397 Query: 358 ctgtgtcctggacaactgtaccattgcagcaaaactctttcttgaggtctttgaggatct 417 ||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 396 ctgggtcctggacaacagtaccattgcagcaaaactctttcttgagatctttgaggatct 337 Query: 418 tgctgtagctgaactccttcttcagaccctggacagtggtcaggctcttgcgaccattac 477 || |||||||||| |||||||||| ||||||||||||||||||||||| || ||||||| Sbjct: 336 tgttgtagctgaattccttcttcaatccctggacagtggtcaggctcttacggccattac 277 Query: 478 gctgctggatgcgtacatgcacgtagtcctttgatccggcagctgcaccagcgtccccag 537 ||||||||||||||||||| ||||||||||||||||| ||||| ||||||| ||| |||| Sbjct: 276 gctgctggatgcgtacatgaacgtagtcctttgatcctgcagccgcaccagagtctccag 217 Query: 538 cattcgcctcggcaaaggggtcaaaggcagttgggatctgaacgtcgagatcagacatga 597 |||| ||||| |||||||| || ||||||||||||||||||| ||||||||||||||||| Sbjct: 216 cattggcctcagcaaagggatcgaaggcagttgggatctgaatgtcgagatcagacatga 157 Query: 598 aa-actcctggtgagagtggcaaaagctacaccaagaacct 637 || | ||||||| |||||| |||||||||||||||||| Sbjct: 156 aactttgctggtgaaagtggc--aagctacaccaagaacct 118
>emb|AJ242801.1|SST242801 Sporobolus stapfianus partial mRNA for putative translation initiation factor eIF-1 Length = 796 Score = 494 bits (249), Expect = e-136 Identities = 363/399 (90%), Gaps = 4/399 (1%) Strand = Plus / Minus Query: 237 ctggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctgg 296 |||||||||||||| ||||||||||| |||||||| ||||| ||||||||||| |||||| Sbjct: 526 ctggcagttgctcaaaaaccatgaattttgatgtgctcctttttcacaatgccggcctgg 467 Query: 297 acaaggaagtttgagacgttcttcctctgatcaccctggagttgaatgacctgtccaagt 356 |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 466 acaaggaaatttgagacgttcttcctctgatcaccctgaagttgaatgacctgtccaagc 407 Query: 357 tctgtgtcctggacaactgtaccattgcagcaaaactctttcttgaggtctttgaggatc 416 |||| ||||||||||||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 406 tctgggtcctggacaactgtaccattgcagcagaactccttcttgaggtctttcaggatc 347 Query: 417 ttgctgtagctgaactccttcttcagaccctggacagtggtcaggctcttgcgaccatta 476 ||| |||||||||| |||||||||| |||||| ||||| ||||| ||||||||||||||| Sbjct: 346 ttgttgtagctgaattccttcttcaaaccctgaacagtcgtcagactcttgcgaccatta 287 Query: 477 cgctgctggatgcgtacatgcacgtagtcctttgatccggcagctgcaccagcgtcccca 536 |||||||||||||| ||||| ||||||||||||||||| ||||| ||||||| ||||||| Sbjct: 286 cgctgctggatgcgcacatgaacgtagtcctttgatcctgcagccgcaccagagtcccca 227 Query: 537 gcattcgcctcggcaaaggggtcaaaggcagttgggatctgaacgtcgagatcagacatg 596 ||||| ||||| | |||||| || ||||||||||||||||||| ||| |||||||||||| Sbjct: 226 gcattggcctcagaaaagggatcgaaggcagttgggatctgaatgtcaagatcagacatg 167 Query: 597 aaaact--cctggtgagagtggcaaaagctacaccaaga 633 |||||| ||||||||||||| |||||||||||||| Sbjct: 166 aaaacttgagtggtgagagtggc--aagctacaccaaga 130 Score = 44.1 bits (22), Expect = 0.63 Identities = 39/45 (86%) Strand = Plus / Minus Query: 10 ttattnaaccttgatgggagagggtaacaagccatctaacgatgg 54 ||||| || ||||| | || |||||||||||||||| |||||||| Sbjct: 762 ttattcaatcttgacgagaaagggtaacaagccatcaaacgatgg 718
>emb|AJ249397.1|PPR249397 Phleum pratense mRNA for putative protein translation factor SUI (SUI1 gene), partial Length = 560 Score = 478 bits (241), Expect = e-131 Identities = 307/329 (93%) Strand = Plus / Minus Query: 207 gctgctttgcatgcagactctgataaggagctggcagttgctcagaaaccatgaatcttg 266 |||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 329 gctgatttgcatgcagactttgatatggagctggcagttgctcagaaaccatgaatcttg 270 Query: 267 atgtgttccttcttcacaatgcccgcctggacaaggaagtttgagacgttcttcctctga 326 ||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||| Sbjct: 269 atgtgttcctttttcacaatgccagcctggacgaggaaatttgagacgttcttcctctga 210 Query: 327 tcaccctggagttgaatgacctgtccaagttctgtgtcctggacaactgtaccattgcag 386 ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||| Sbjct: 209 tcaccctggagttgaatgacctggccaagctctgggtcctggacaactgtaccattgcag 150 Query: 387 caaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttcagaccc 446 ||||||||||||||||| |||||||||||||| ||||||||||| |||||||||| ||| Sbjct: 149 caaaactctttcttgagatctttgaggatcttactgtagctgaattccttcttcaagccc 90 Query: 447 tggacagtggtcaggctcttgcgaccattacgctgctggatgcgtacatgcacgtagtcc 506 |||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 89 tggacagtagtcagactcttgcggccattacgctgctggatgcgtacatggacgtagtct 30 Query: 507 tttgatccggcagctgcaccagcgtcccc 535 |||||||| || ||||||||||||||||| Sbjct: 29 tttgatcctgccgctgcaccagcgtcccc 1 Score = 65.9 bits (33), Expect = 2e-07 Identities = 151/184 (82%), Gaps = 10/184 (5%) Strand = Plus / Minus Query: 7 ttattattnaaccttgatgggagagggtaacaagccatctaacgatggtgctccttacaa 66 |||||||| |||||||| | ||| || ||||||| |||||||||||||||| ||||| | Sbjct: 522 ttattattcaaccttgacagtagaaggaaacaagc-atctaacgatggtgcttcttac-a 465 Query: 67 agcttcaacacaacggt-agtaagcatatacgcacgcagagaggtggctatgctagac-- 123 | |||||||||||||| | ||||||| ||||||||||||| |||||||||| | Sbjct: 464 ggtttcaacacaacggtaaacaagcata----cacgcagagaggtcgctatgctaggctt 409 Query: 124 tttgtgtatactcagaaggcgcaagcgtggcgcctgctagcgctagcacacaactaaata 183 |||||||| ||||| || | |||||||| |||||||| ||||||||||||| |||| Sbjct: 408 tttgtgtaaactca-aacgtgcaagcgtaatgcctgctattgctagcacacaaccgaata 350 Query: 184 tact 187 |||| Sbjct: 349 tact 346
>ref|XM_478516.1| Oryza sativa (japonica cultivar-group), mRNA Length = 348 Score = 468 bits (236), Expect = e-128 Identities = 320/348 (91%) Strand = Plus / Minus Query: 248 tcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaagtt 307 |||||||||||||||||||||||||||||||||||||||||| ||||| ||||| || || Sbjct: 348 tcagaaaccatgaatcttgatgtgttccttcttcacaatgccggcctgaacaagaaaatt 289 Query: 308 tgagacgttcttcctctgatcaccctggagttgaatgacctgtccaagttctgtgtcctg 367 ||| ||||| ||||||||||||||||| |||||||||||||| ||||| |||| |||||| Sbjct: 288 tgatacgtttttcctctgatcaccctgaagttgaatgacctggccaagctctgggtcctg 229 Query: 368 gacaactgtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctgtagct 427 |||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 228 gacaacagtaccattgcagcaaaactctttcttgagatctttgaggatcttgttgtagct 169 Query: 428 gaactccttcttcagaccctggacagtggtcaggctcttgcgaccattacgctgctggat 487 ||| |||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 168 gaattccttcttcaatccctggacagtggtcaggctcttacggccattacgctgctggat 109 Query: 488 gcgtacatgcacgtagtcctttgatccggcagctgcaccagcgtccccagcattcgcctc 547 ||||||||| ||||||||||||||||| ||||| ||||||| ||| |||||||| ||||| Sbjct: 108 gcgtacatgaacgtagtcctttgatcctgcagccgcaccagagtctccagcattggcctc 49 Query: 548 ggcaaaggggtcaaaggcagttgggatctgaacgtcgagatcagacat 595 |||||||| || ||||||||||||||||||| ||||||||||||||| Sbjct: 48 agcaaagggatcgaaggcagttgggatctgaatgtcgagatcagacat 1
>gb|DQ083224.1| Oryza sativa (indica cultivar-group) clone 5B11F72 mRNA sequence Length = 358 Score = 299 bits (151), Expect = 7e-78 Identities = 233/258 (90%), Gaps = 3/258 (1%) Strand = Plus / Minus Query: 381 ttgcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttc 440 ||||||||||||||||||||||| ||||| ||||||||| |||||||||| ||||||||| Sbjct: 358 ttgcagcaaaactctttcttgagatctttaaggatcttgttgtagctgaattccttcttc 299 Query: 441 agaccctggacagtggtcaggctcttgcgaccattacgctgctggatgcgtacatgcacg 500 | ||||||||||||||||||||||| || |||||||||||||||||||||||||| ||| Sbjct: 298 aatccctggacagtggtcaggctcttacggccattacgctgctggatgcgtacatgaacg 239 Query: 501 tagtcctttgatccggcagctgcaccagcgtccccagcattcgcctcggcaaaggggtca 560 |||||||||||||| ||||| ||||||| ||| |||||||| ||||| |||||||| || Sbjct: 238 tagtcctttgatcctgcagccgcaccagagtctccagcattggcctcagcaaagggatcg 179 Query: 561 aaggcagttgggatctgaacgtcgagatcagacatgaaa-actcctggtgagagtggcaa 619 ||||||||||||||||||| ||||||||||||||||||| | ||||||| |||||| Sbjct: 178 aaggcagttgggatctgaatgtcgagatcagacatgaaactttgctggtgaaagtggc-- 121 Query: 620 aagctacaccaagaacct 637 |||||||||||||||||| Sbjct: 120 aagctacaccaagaacct 103
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 278 bits (140), Expect = 2e-71 Identities = 194/212 (91%) Strand = Plus / Plus Query: 345 acctgtccaagttctgtgtcctggacaactgtaccattgcagcaaaactctttcttgagg 404 ||||| ||||| |||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 20680177 acctggccaagctctgggtcctggacaacagtaccattgcagcaaaactctttcttgaga 20680236 Query: 405 tctttgaggatcttgctgtagctgaactccttcttcagaccctggacagtggtcaggctc 464 ||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 20680237 tctttgaggatcttgttgtagctgaattccttcttcaatccctggacagtggtcaggctc 20680296 Query: 465 ttgcgaccattacgctgctggatgcgtacatgcacgtagtcctttgatccggcagctgca 524 || || |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 20680297 ttacggccattacgctgctggatgcgtacatgaacgtagtcctttgatcctgcagccgca 20680356 Query: 525 ccagcgtccccagcattcgcctcggcaaaggg 556 |||| ||| |||||||| ||||| |||||||| Sbjct: 20680357 ccagagtctccagcattggcctcagcaaaggg 20680388 Score = 107 bits (54), Expect = 5e-20 Identities = 57/58 (98%) Strand = Plus / Plus Query: 238 tggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctg 295 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 20679873 tggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgccggcctg 20679930 Score = 73.8 bits (37), Expect = 7e-10 Identities = 68/76 (89%), Gaps = 3/76 (3%) Strand = Plus / Plus Query: 561 aaggcagttgggatctgaacgtcgagatcagacatgaaa-actcctggtgagagtggcaa 619 ||||||||||||||||||| ||||||||||||||||||| | ||||||| |||||| Sbjct: 20680478 aaggcagttgggatctgaatgtcgagatcagacatgaaactttgctggtgaaagtggc-- 20680535 Query: 620 aagctacaccaagaac 635 |||||||||||||||| Sbjct: 20680536 aagctacaccaagaac 20680551 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 292 cctggacaaggaagtttgagacgttcttcctctgatcaccctggagttgaatgacct 348 |||| ||||| || ||||| ||||| ||||||||||||||||| ||||||||||||| Sbjct: 20680033 cctgaacaagaaaatttgatacgtttttcctctgatcaccctgaagttgaatgacct 20680089
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 278 bits (140), Expect = 2e-71 Identities = 194/212 (91%) Strand = Plus / Plus Query: 345 acctgtccaagttctgtgtcctggacaactgtaccattgcagcaaaactctttcttgagg 404 ||||| ||||| |||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 32927 acctggccaagctctgggtcctggacaacagtaccattgcagcaaaactctttcttgaga 32986 Query: 405 tctttgaggatcttgctgtagctgaactccttcttcagaccctggacagtggtcaggctc 464 ||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 32987 tctttgaggatcttgttgtagctgaattccttcttcaatccctggacagtggtcaggctc 33046 Query: 465 ttgcgaccattacgctgctggatgcgtacatgcacgtagtcctttgatccggcagctgca 524 || || |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 33047 ttacggccattacgctgctggatgcgtacatgaacgtagtcctttgatcctgcagccgca 33106 Query: 525 ccagcgtccccagcattcgcctcggcaaaggg 556 |||| ||| |||||||| ||||| |||||||| Sbjct: 33107 ccagagtctccagcattggcctcagcaaaggg 33138 Score = 107 bits (54), Expect = 5e-20 Identities = 57/58 (98%) Strand = Plus / Plus Query: 238 tggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctg 295 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 32623 tggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgccggcctg 32680 Score = 73.8 bits (37), Expect = 7e-10 Identities = 68/76 (89%), Gaps = 3/76 (3%) Strand = Plus / Plus Query: 561 aaggcagttgggatctgaacgtcgagatcagacatgaaa-actcctggtgagagtggcaa 619 ||||||||||||||||||| ||||||||||||||||||| | ||||||| |||||| Sbjct: 33228 aaggcagttgggatctgaatgtcgagatcagacatgaaactttgctggtgaaagtggc-- 33285 Query: 620 aagctacaccaagaac 635 |||||||||||||||| Sbjct: 33286 aagctacaccaagaac 33301 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 292 cctggacaaggaagtttgagacgttcttcctctgatcaccctggagttgaatgacct 348 |||| ||||| || ||||| ||||| ||||||||||||||||| ||||||||||||| Sbjct: 32783 cctgaacaagaaaatttgatacgtttttcctctgatcaccctgaagttgaatgacct 32839
>emb|X51910.1|OSGOS2G O.sativa (rice) constitutive GOS2 gene Length = 3192 Score = 270 bits (136), Expect = 6e-69 Identities = 193/212 (91%) Strand = Plus / Minus Query: 345 acctgtccaagttctgtgtcctggacaactgtaccattgcagcaaaactctttcttgagg 404 ||||| ||||| |||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 2535 acctggccaagctctgggtcctggacaacagtaccattgcagcaaaactctttcttgaga 2476 Query: 405 tctttgaggatcttgctgtagctgaactccttcttcagaccctggacagtggtcaggctc 464 ||||| ||||||||| |||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 2475 tctttaaggatcttgttgtagctgaattccttcttcaatccctggacagtggtcaggctc 2416 Query: 465 ttgcgaccattacgctgctggatgcgtacatgcacgtagtcctttgatccggcagctgca 524 || || |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 2415 ttacggccattacgctgctggatgcgtacatgaacgtagtcctttgatcctgcagccgca 2356 Query: 525 ccagcgtccccagcattcgcctcggcaaaggg 556 |||| ||| |||||||| ||||| |||||||| Sbjct: 2355 ccagagtctccagcattggcctcagcaaaggg 2324 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Minus Query: 239 ggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctg 295 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2838 ggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgccggcctg 2782 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 292 cctggacaaggaagtttgagacgttcttcctctgatcaccctggagttgaatgacct 348 |||| ||||| || ||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 2679 cctgaacaagaaaatttgatacgttcttcctctgatcaccctgaagttgaatgacct 2623 Score = 73.8 bits (37), Expect = 7e-10 Identities = 68/76 (89%), Gaps = 3/76 (3%) Strand = Plus / Minus Query: 561 aaggcagttgggatctgaacgtcgagatcagacatgaaa-actcctggtgagagtggcaa 619 ||||||||||||||||||| ||||||||||||||||||| | ||||||| |||||| Sbjct: 2234 aaggcagttgggatctgaatgtcgagatcagacatgaaactttgctggtgaaagtggc-- 2177 Query: 620 aagctacaccaagaac 635 |||||||||||||||| Sbjct: 2176 aagctacaccaagaac 2161
>emb|AJ519839.1|CAR519839 Coffea arabica mRNA for SUI1 protein Length = 678 Score = 198 bits (100), Expect = 2e-47 Identities = 220/260 (84%) Strand = Plus / Minus Query: 252 aaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaagtttgag 311 |||||||||||||| |||||||||||||| || || || ||||| ||||||||| |||| Sbjct: 472 aaaccatgaatctttatgtgttccttctttacgatcccagcctgaacaaggaagcttgaa 413 Query: 312 acgttcttcctctgatcaccctggagttgaatgacctgtccaagttctgtgtcctggaca 371 || ||||| | |||||| || ||||||||||||||||| || ||||||| ||| |||||| Sbjct: 412 acattcttacgctgatccccttggagttgaatgacctggcctagttctgggtcttggaca 353 Query: 372 actgtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaac 431 || |||||||||||||||||||||||||||||||| || ||||| || |||| |||||| Sbjct: 352 acagtaccattgcagcaaaactctttcttgaggtccttcaggattttattgtaactgaac 293 Query: 432 tccttcttcagaccctggacagtggtcaggctcttgcgaccattacgctgctggatgcgt 491 || ||||||| || || ||||| |||||||| || | ||||||||| || ||||| || Sbjct: 292 tctttcttcaacccttgcacagtagtcaggcttttcctaccattacgttgttggatacgg 233 Query: 492 acatgcacgtagtcctttga 511 | |||||| || |||||||| Sbjct: 232 atatgcacataatcctttga 213
>gb|DQ083223.1| Oryza sativa (indica cultivar-group) clone 5B12A69 mRNA sequence Length = 209 Score = 198 bits (100), Expect = 2e-47 Identities = 127/136 (93%) Strand = Plus / Minus Query: 238 tggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctgga 297 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 139 tggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgccggcctgaa 80 Query: 298 caaggaagtttgagacgttcttcctctgatcaccctggagttgaatgacctgtccaagtt 357 |||| || ||||| ||||||||||||||||||||||| |||||||||||||| ||||| | Sbjct: 79 caagaaaatttgatacgttcttcctctgatcaccctgaagttgaatgacctggccaagct 20 Query: 358 ctgtgtcctggacaac 373 ||| |||||||||||| Sbjct: 19 ctgggtcctggacaac 4
>gb|BT013323.1| Lycopersicon esculentum clone 135043R, mRNA sequence Length = 787 Score = 190 bits (96), Expect = 4e-45 Identities = 195/228 (85%) Strand = Plus / Minus Query: 248 tcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaagtt 307 ||||||||||||||| ||||||||||| |||||||| || || ||||||||||| || | Sbjct: 511 tcagaaaccatgaattttgatgtgttctttcttcacgattccagcctggacaagaaatgt 452 Query: 308 tgagacgttcttcctctgatcaccctggagttgaatgacctgtccaagttctgtgtcctg 367 || |||||||| ||||||||||||||||||||||| ||||| || ||||||| ||||| Sbjct: 451 agaaacgttctttctctgatcaccctggagttgaataacctggcctagttctggatcctg 392 Query: 368 gacaactgtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctgtagct 427 |||||| |||||||||||||||||||||||||| ||||| || || || || ||||||| Sbjct: 391 gacaacagtaccattgcagcaaaactctttcttaaggtcctttagtattttattgtagct 332 Query: 428 gaactccttcttcagaccctggacagtggtcaggctcttgcgaccatt 475 ||| || ||||||| || || ||||| |||||||| || |||||||| Sbjct: 331 gaattctttcttcaatccttgcacagttgtcaggcttttccgaccatt 284 Score = 42.1 bits (21), Expect = 2.5 Identities = 54/65 (83%) Strand = Plus / Minus Query: 535 cagcattcgcctcggcaaaggggtcaaaggcagttgggatctgaacgtcgagatcagaca 594 ||||||| ||||| |||||||| ||||| |||| || | || | |||||||||||||| Sbjct: 230 cagcatttgcctcagcaaagggatcaaaagcagcgggaacttggaggtcgagatcagaca 171 Query: 595 tgaaa 599 ||||| Sbjct: 170 tgaaa 166
>gb|AY104121.1| Zea mays PCO141133 mRNA sequence Length = 815 Score = 186 bits (94), Expect = 7e-44 Identities = 280/342 (81%) Strand = Plus / Minus Query: 258 tgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaagtttgagacgttc 317 ||||||||||||| || |||||| |||| || ||||| || ||||| | | || ||| Sbjct: 503 tgaatcttgatgttctctttcttcgcaatcccagcctgaactaggaaagtagcaacattc 444 Query: 318 ttcctctgatcaccctggagttgaatgacctgtccaagttctgtgtcctggacaactgta 377 || | ||| ||||| ||||| ||||||||||| || || |||| |||||| || || ||| Sbjct: 443 ttgcgctggtcaccttggagctgaatgacctggcctagctctgggtcctgaactacagta 384 Query: 378 ccattgcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttc 437 ||||||||||| || || ||||| || || |||||||||||| | ||||||||||| ||| Sbjct: 383 ccattgcagcagaattccttcttcagatccttgaggatcttgttatagctgaactctttc 324 Query: 438 ttcagaccctggacagtggtcaggctcttgcgaccattacgctgctggatgcgtacatgc 497 |||||||||||||| || ||||| ||||| | || || |||||||||||||| |||||| Sbjct: 323 ttcagaccctggactgtagtcagactctttctgccgttgcgctgctggatgcgcacatgc 264 Query: 498 acgtagtcctttgatccggcagctgcaccagcgtccccagcattcgcctcggcaaagggg 557 || || ||||| | ||| | | | ||||||| |||| ||||||| ||||| ||||| || Sbjct: 263 acataatccttcgttccaggaccagcaccagagtcctcagcatttgcctcagcaaacgga 204 Query: 558 tcaaaggcagttgggatctgaacgtcgagatcagacatgaaa 599 |||||||||| ||| | ||| ||||||||||||||||||||| Sbjct: 203 tcaaaggcagatggaagctggacgtcgagatcagacatgaaa 162
>ref|NM_118847.2| Arabidopsis thaliana translation initiation factor AT4G27130 mRNA, complete cds Length = 811 Score = 178 bits (90), Expect = 2e-41 Identities = 269/329 (81%), Gaps = 6/329 (1%) Strand = Plus / Minus Query: 245 tgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaa 304 ||||||||||||||| |||||||||| || |||||||||| || |||||||| ||||| Sbjct: 595 tgctcagaaaccatggatcttgatgttatctttcttcacaagcccagcctggactaggaa 536 Query: 305 gtttgagacgttcttcctctgatcaccctggagttgaatgacctgtccaagttctgtgtc 364 | |||||||||||||||||||| || || || ||||| |||||||| ||||||| ||| Sbjct: 535 cgtggagacgttcttcctctgatcgccttgaagctgaataacctgtccgagttctgagtc 476 Query: 365 ctggacaactgtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctgta 424 || || || || || ||||||||||| |||||||||||||| || || |||||| |||| Sbjct: 475 ttgaaccacagttccgttgcagcaaaattctttcttgaggtccttaagtatcttggtgta 416 Query: 425 gctgaactccttcttcagaccctggacagtggtcaggctcttgcgaccattacgctgctg 484 |||| |||| |||||||| |||||||| || |||| ||| || | |||||| |||||||| Sbjct: 415 gctgtactctttcttcagcccctggaccgttgtcaagcttttcctaccattccgctgctg 356 Query: 485 gatgcgtacatgcacgtagtcctttgatccggcagctgcaccagcgtccccagcattcgc 544 || || | ||| ||||| ||||||| || ||||||| | |||| |||||||||| Sbjct: 355 gacacgaatatgaacgtactcctttgttc------ctgcacctgagtcctcagcattcgc 302 Query: 545 ctcggcaaaggggtcaaaggcagttggga 573 || ||||| ||||| |||||||| |||| Sbjct: 301 atcagcaaacgggtcgaaggcagtaggga 273
>gb|AY037234.1| Arabidopsis thaliana AT4g27130/T24A18_80 mRNA, complete cds Length = 737 Score = 178 bits (90), Expect = 2e-41 Identities = 269/329 (81%), Gaps = 6/329 (1%) Strand = Plus / Minus Query: 245 tgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaa 304 ||||||||||||||| |||||||||| || |||||||||| || |||||||| ||||| Sbjct: 547 tgctcagaaaccatggatcttgatgttatctttcttcacaagcccagcctggactaggaa 488 Query: 305 gtttgagacgttcttcctctgatcaccctggagttgaatgacctgtccaagttctgtgtc 364 | |||||||||||||||||||| || || || ||||| |||||||| ||||||| ||| Sbjct: 487 cgtggagacgttcttcctctgatcgccttgaagctgaataacctgtccgagttctgagtc 428 Query: 365 ctggacaactgtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctgta 424 || || || || || ||||||||||| |||||||||||||| || || |||||| |||| Sbjct: 427 ttgaaccacagttccgttgcagcaaaattctttcttgaggtccttaagtatcttggtgta 368 Query: 425 gctgaactccttcttcagaccctggacagtggtcaggctcttgcgaccattacgctgctg 484 |||| |||| |||||||| |||||||| || |||| ||| || | |||||| |||||||| Sbjct: 367 gctgtactctttcttcagcccctggaccgttgtcaagcttttcctaccattccgctgctg 308 Query: 485 gatgcgtacatgcacgtagtcctttgatccggcagctgcaccagcgtccccagcattcgc 544 || || | ||| ||||| ||||||| || ||||||| | |||| |||||||||| Sbjct: 307 gacacgaatatgaacgtactcctttgttc------ctgcacctgagtcctcagcattcgc 254 Query: 545 ctcggcaaaggggtcaaaggcagttggga 573 || ||||| ||||| |||||||| |||| Sbjct: 253 atcagcaaacgggtcgaaggcagtaggga 225
>emb|BX828314.1|CNS0A3U9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH75ZH04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 738 Score = 178 bits (90), Expect = 2e-41 Identities = 269/329 (81%), Gaps = 6/329 (1%) Strand = Plus / Minus Query: 245 tgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaa 304 ||||||||||||||| |||||||||| || |||||||||| || |||||||| ||||| Sbjct: 524 tgctcagaaaccatggatcttgatgttatctttcttcacaagcccagcctggactaggaa 465 Query: 305 gtttgagacgttcttcctctgatcaccctggagttgaatgacctgtccaagttctgtgtc 364 | |||||||||||||||||||| || || || ||||| |||||||| ||||||| ||| Sbjct: 464 cgtggagacgttcttcctctgatcgccttgaagctgaataacctgtccgagttctgagtc 405 Query: 365 ctggacaactgtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctgta 424 || || || || || ||||||||||| |||||||||||||| || || |||||| |||| Sbjct: 404 ttgaaccacagttccgttgcagcaaaattctttcttgaggtccttaagtatcttggtgta 345 Query: 425 gctgaactccttcttcagaccctggacagtggtcaggctcttgcgaccattacgctgctg 484 |||| |||| |||||||| |||||||| || |||| ||| || | |||||| |||||||| Sbjct: 344 gctgtactctttcttcagcccctggaccgttgtcaagcttttcctaccattccgctgctg 285 Query: 485 gatgcgtacatgcacgtagtcctttgatccggcagctgcaccagcgtccccagcattcgc 544 || || | ||| ||||| ||||||| || ||||||| | |||| |||||||||| Sbjct: 284 gacacgaatatgaacgtactcctttgttc------ctgcacctgagtcctcagcattcgc 231 Query: 545 ctcggcaaaggggtcaaaggcagttggga 573 || ||||| ||||| |||||||| |||| Sbjct: 230 atcagcaaacgggtcgaaggcagtaggga 202
>gb|AY088288.1| Arabidopsis thaliana clone 5206 mRNA, complete sequence Length = 805 Score = 178 bits (90), Expect = 2e-41 Identities = 269/329 (81%), Gaps = 6/329 (1%) Strand = Plus / Minus Query: 245 tgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaa 304 ||||||||||||||| |||||||||| || |||||||||| || |||||||| ||||| Sbjct: 595 tgctcagaaaccatggatcttgatgttatctttcttcacaagcccagcctggactaggaa 536 Query: 305 gtttgagacgttcttcctctgatcaccctggagttgaatgacctgtccaagttctgtgtc 364 | |||||||||||||||||||| || || || ||||| |||||||| ||||||| ||| Sbjct: 535 cgtggagacgttcttcctctgatcgccttgaagctgaataacctgtccgagttctgagtc 476 Query: 365 ctggacaactgtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctgta 424 || || || || || ||||||||||| |||||||||||||| || || |||||| |||| Sbjct: 475 ttgaaccacagttccgttgcagcaaaattctttcttgaggtccttaagtatcttggtgta 416 Query: 425 gctgaactccttcttcagaccctggacagtggtcaggctcttgcgaccattacgctgctg 484 |||| |||| |||||||| |||||||| || |||| ||| || | |||||| |||||||| Sbjct: 415 gctgtactctttcttcagcccctggaccgttgtcaagcttttcctaccattccgctgctg 356 Query: 485 gatgcgtacatgcacgtagtcctttgatccggcagctgcaccagcgtccccagcattcgc 544 || || | ||| ||||| ||||||| || ||||||| | |||| |||||||||| Sbjct: 355 gacacgaatatgaacgtactcctttgttc------ctgcacctgagtcctcagcattcgc 302 Query: 545 ctcggcaaaggggtcaaaggcagttggga 573 || ||||| ||||| |||||||| |||| Sbjct: 301 atcagcaaacgggtcgaaggcagtaggga 273
>gb|AY108531.1| Zea mays PCO112988 mRNA sequence Length = 792 Score = 176 bits (89), Expect = 7e-41 Identities = 230/277 (83%) Strand = Plus / Minus Query: 323 ctgatcaccctggagttgaatgacctgtccaagttctgtgtcctggacaactgtaccatt 382 ||||||||| || |||||||||||||| || || |||| |||||||| || |||||||| Sbjct: 445 ctgatcaccttgcagttgaatgacctggcctagctctggatcctggactacagtaccatt 386 Query: 383 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttcag 442 |||||| |||||||| ||||| || |||||||||||| |||||||| |||| ||||||| Sbjct: 385 gcagcagaactcttttttgagatccttgaggatcttgttgtagctgtactctttcttcaa 326 Query: 443 accctggacagtggtcaggctcttgcgaccattacgctgctggatgcgtacatgcacgta 502 ||||| ||||| ||||| ||||| | || || |||||||| || || || ||||| || Sbjct: 325 gccctgaacagttgtcagactcttccttccgttgcgctgctgaatacgcacgtgcacata 266 Query: 503 gtcctttgatccggcagctgcaccagcgtccccagcattcgcctcggcaaaggggtcaaa 562 |||||||||||| ||| | |||| | |||| ||||||| ||||| ||||| || ||||| Sbjct: 265 gtcctttgatccagcaccagcactggagtcctcagcatttgcctctgcaaacggatcaaa 206 Query: 563 ggcagttgggatctgaacgtcgagatcagacatgaaa 599 |||| ||| | ||| ||||||||||||||||||||| Sbjct: 205 agcagatggaagctggacgtcgagatcagacatgaaa 169
>gb|AY060537.1| Arabidopsis thaliana AT4g27130/T24A18_80 mRNA, complete cds Length = 342 Score = 172 bits (87), Expect = 1e-39 Identities = 266/326 (81%), Gaps = 6/326 (1%) Strand = Plus / Minus Query: 248 tcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaagtt 307 |||||||||||| |||||||||| || |||||||||| || |||||||| ||||| | Sbjct: 342 tcagaaaccatggatcttgatgttatctttcttcacaagcccagcctggactaggaacgt 283 Query: 308 tgagacgttcttcctctgatcaccctggagttgaatgacctgtccaagttctgtgtcctg 367 |||||||||||||||||||| || || || ||||| |||||||| ||||||| ||| || Sbjct: 282 ggagacgttcttcctctgatcgccttgaagctgaataacctgtccgagttctgagtcttg 223 Query: 368 gacaactgtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctgtagct 427 || || || || ||||||||||| |||||||||||||| || || |||||| ||||||| Sbjct: 222 aaccacagttccgttgcagcaaaattctttcttgaggtccttaagtatcttggtgtagct 163 Query: 428 gaactccttcttcagaccctggacagtggtcaggctcttgcgaccattacgctgctggat 487 | |||| |||||||| |||||||| || |||| ||| || | |||||| |||||||||| Sbjct: 162 gtactctttcttcagcccctggaccgttgtcaagcttttcctaccattccgctgctggac 103 Query: 488 gcgtacatgcacgtagtcctttgatccggcagctgcaccagcgtccccagcattcgcctc 547 || | ||| ||||| ||||||| || ||||||| | |||| |||||||||| || Sbjct: 102 acgaatatgaacgtactcctttgttc------ctgcacctgagtcctcagcattcgcatc 49 Query: 548 ggcaaaggggtcaaaggcagttggga 573 ||||| ||||| |||||||| |||| Sbjct: 48 agcaaacgggtcgaaggcagtaggga 23
>gb|AF098672.1|AF098672 Brassica oleracea translation initiation factor nps45 mRNA, complete cds Length = 560 Score = 172 bits (87), Expect = 1e-39 Identities = 201/239 (84%) Strand = Plus / Minus Query: 246 gctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaag 305 |||||||||||||| |||| ||||| ||||||||||||| || |||||||||||||| Sbjct: 371 gctcagaaaccatggatctggatgtcgtccttcttcacaagcccagcctggacaaggaac 312 Query: 306 tttgagacgttcttcctctgatcaccctggagttgaatgacctgtccaagttctgtgtcc 365 | ||||||||||||||||| || || || || ||||| |||||||||||||| | ||| Sbjct: 311 gtggagacgttcttcctctggtcgccttgaagctgaataacctgtccaagttcagagtct 252 Query: 366 tggacaactgtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctgtag 425 || || || || || ||||| ||||||||||||||||| || || || |||||| ||||| Sbjct: 251 tgaacgacagttccgttgcaacaaaactctttcttgagatccttaagtatcttggtgtag 192 Query: 426 ctgaactccttcttcagaccctggacagtggtcaggctcttgcgaccattacgctgctg 484 ||| |||| |||||||| ||||||||||| |||| ||| || | ||||||||||||||| Sbjct: 191 ctgtactctttcttcagcccctggacagttgtcaagcttttcctaccattacgctgctg 133
>dbj|AB003378.1| Salix bakko mRNA for SUI1 homolog, complete cds Length = 700 Score = 172 bits (87), Expect = 1e-39 Identities = 198/235 (84%) Strand = Plus / Minus Query: 250 agaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaagtttg 309 ||||||||||||||||||| | ||||||||||||||| || ||||| || |||||| | Sbjct: 478 agaaaccatgaatcttgatattttccttcttcacaataccagcctgcacgaggaaggagg 419 Query: 310 agacgttcttcctctgatcaccctggagttgaatgacctgtccaagttctgtgtcctgga 369 ||||||||||||| ||||||||||| |||||||||||||| || | || | ||||||| Sbjct: 418 agacgttcttcctttgatcaccctgtagttgaatgacctgccctaactcaggatcctgga 359 Query: 370 caactgtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctgtagctga 429 |||| || ||||||||||| ||||||||||||||||| || || |||||| ||||||| Sbjct: 358 caacagttccattgcagcagaactctttcttgaggtccttaagtatcttgttgtagctat 299 Query: 430 actccttcttcagaccctggacagtggtcaggctcttgcgaccattacgctgctg 484 | |||||||||| || || ||||| |||||||| || | |||||||||||||| Sbjct: 298 agtccttcttcaatccttgaacagtagtcaggcttttccttccattacgctgctg 244
>emb|BX828730.1|CNS0A3GG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL33ZF02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 735 Score = 170 bits (86), Expect = 4e-39 Identities = 268/329 (81%), Gaps = 6/329 (1%) Strand = Plus / Minus Query: 245 tgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaa 304 ||||||||||||||| |||||||||| || |||||||||| || |||||||| ||||| Sbjct: 525 tgctcagaaaccatggatcttgatgttatctttcttcacaagcccagcctggactaggaa 466 Query: 305 gtttgagacgttcttcctctgatcaccctggagttgaatgacctgtccaagttctgtgtc 364 | |||||||||||||||||||| || || || ||||| |||||||| ||||||| ||| Sbjct: 465 cgtggagacgttcttcctctgatcgccttgaagctgaataacctgtccgagttctgagtc 406 Query: 365 ctggacaactgtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctgta 424 || || || || || ||||||||||| |||||||||||||| || || |||||| |||| Sbjct: 405 ttgaaccacagttccgttgcagcaaaattctttcttgaggtccttaagtatcttggtgta 346 Query: 425 gctgaactccttcttcagaccctggacagtggtcaggctcttgcgaccattacgctgctg 484 |||| |||| |||||||| |||||||| || || | ||| || | |||||| |||||||| Sbjct: 345 gctgtactctttcttcagcccctggaccgttgtaaagcttttcctaccattccgctgctg 286 Query: 485 gatgcgtacatgcacgtagtcctttgatccggcagctgcaccagcgtccccagcattcgc 544 || || | ||| ||||| ||||||| || ||||||| | |||| |||||||||| Sbjct: 285 gacacgaatatgaacgtactcctttgttc------ctgcacctgagtcctcagcattcgc 232 Query: 545 ctcggcaaaggggtcaaaggcagttggga 573 || ||||| ||||| |||||||| |||| Sbjct: 231 atcagcaaacgggtcgaaggcagtaggga 203
>gb|BT013262.1| Lycopersicon esculentum clone 134804F, mRNA sequence Length = 1343 Score = 167 bits (84), Expect = 6e-38 Identities = 183/216 (84%) Strand = Plus / Minus Query: 248 tcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaagtt 307 ||||||||||||||| |||||||| || |||||||| || || ||||||||||| ||| | Sbjct: 1114 tcagaaaccatgaattttgatgtgctctttcttcacgattccagcctggacaagaaaggt 1055 Query: 308 tgagacgttcttcctctgatcaccctggagttgaatgacctgtccaagttctgtgtcctg 367 || |||||||||||||| |||||||| |||||||| ||||| || ||||| | ||||| Sbjct: 1054 agaaacgttcttcctctggtcaccctgaagttgaataacctggcctagttcaggatcctg 995 Query: 368 gacaactgtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctgtagct 427 |||||| |||||||||||||| || ||||||||||| || || || |||||| | ||||| Sbjct: 994 gacaacagtaccattgcagcagaattctttcttgagatccttcagtatcttgttatagct 935 Query: 428 gaactccttcttcagaccctggacagtggtcaggct 463 ||| || ||||||| ||||| ||||| |||||||| Sbjct: 934 gaattctttcttcaacccctgcacagttgtcaggct 899 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 535 cagcattcgcctcggcaaaggggtcaaaggcagttgggatctgaacgtcgagatcagaca 594 ||||||| ||||| |||||||| ||||| || || || || || |||||||||||||||| Sbjct: 833 cagcatttgcctcagcaaagggatcaaaagcggtaggaatttggacgtcgagatcagaca 774 Query: 595 tgaaa 599 ||||| Sbjct: 773 tgaaa 769
>ref|NM_104307.3| Arabidopsis thaliana translation initiation factor AT1G54290 mRNA, complete cds Length = 811 Score = 153 bits (77), Expect = 1e-33 Identities = 200/241 (82%) Strand = Plus / Minus Query: 244 ttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaagga 303 ||||||| |||||||| || || |||| ||||||||||||| || ||||| ||||||| Sbjct: 590 ttgctcaaaaaccatggatttttatgttatccttcttcacaagcccagcctgaacaagga 531 Query: 304 agtttgagacgttcttcctctgatcaccctggagttgaatgacctgtccaagttctgtgt 363 | | || |||||||||||||||||||| || || ||||| |||||||| | ||| | || Sbjct: 530 acgtagatacgttcttcctctgatcaccttgaagctgaataacctgtcctaattcagagt 471 Query: 364 cctggacaactgtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctgt 423 ||||||| || || ||||||||||| || |||||||| |||||||| || |||||||| | Sbjct: 470 cctggacgacggtgccattgcagcagaattctttcttaaggtctttaagtatcttgctat 411 Query: 424 agctgaactccttcttcagaccctggacagtggtcaggctcttgcgaccattacgctgct 483 |||| |||| ||||| || ||||||||||| |||| ||| || | |||||||||||||| Sbjct: 410 agctatactctttcttaagcccctggacagttgtcaagctttttctaccattacgctgct 351 Query: 484 g 484 | Sbjct: 350 g 350
>gb|AF372910.1|AF372910 Arabidopsis thaliana At1g54290/F20D21_53 mRNA, complete cds Length = 742 Score = 153 bits (77), Expect = 1e-33 Identities = 200/241 (82%) Strand = Plus / Minus Query: 244 ttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaagga 303 ||||||| |||||||| || || |||| ||||||||||||| || ||||| ||||||| Sbjct: 528 ttgctcaaaaaccatggatttttatgttatccttcttcacaagcccagcctgaacaagga 469 Query: 304 agtttgagacgttcttcctctgatcaccctggagttgaatgacctgtccaagttctgtgt 363 | | || |||||||||||||||||||| || || ||||| |||||||| | ||| | || Sbjct: 468 acgtagatacgttcttcctctgatcaccttgaagctgaataacctgtcctaattcagagt 409 Query: 364 cctggacaactgtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctgt 423 ||||||| || || ||||||||||| || |||||||| |||||||| || |||||||| | Sbjct: 408 cctggacgacggtgccattgcagcagaattctttcttaaggtctttaagtatcttgctat 349 Query: 424 agctgaactccttcttcagaccctggacagtggtcaggctcttgcgaccattacgctgct 483 |||| |||| ||||| || ||||||||||| |||| ||| || | |||||||||||||| Sbjct: 348 agctatactctttcttaagcccctggacagttgtcaagctttttctaccattacgctgct 289 Query: 484 g 484 | Sbjct: 288 g 288
>emb|BX817291.1|CNS0ACKO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL12ZC05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 748 Score = 153 bits (77), Expect = 1e-33 Identities = 200/241 (82%) Strand = Plus / Minus Query: 244 ttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaagga 303 ||||||| |||||||| || || |||| ||||||||||||| || ||||| ||||||| Sbjct: 527 ttgctcaaaaaccatggatttttatgttatccttcttcacaagcccagcctgaacaagga 468 Query: 304 agtttgagacgttcttcctctgatcaccctggagttgaatgacctgtccaagttctgtgt 363 | | || |||||||||||||||||||| || || ||||| |||||||| | ||| | || Sbjct: 467 acgtagatacgttcttcctctgatcaccttgaagctgaataacctgtcctaattcagagt 408 Query: 364 cctggacaactgtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctgt 423 ||||||| || || ||||||||||| || |||||||| |||||||| || |||||||| | Sbjct: 407 cctggacgacggtgccattgcagcagaattctttcttaaggtctttaagtatcttgctat 348 Query: 424 agctgaactccttcttcagaccctggacagtggtcaggctcttgcgaccattacgctgct 483 |||| |||| ||||| || ||||||||||| |||| ||| || | |||||||||||||| Sbjct: 347 agctatactctttcttaagcccctggacagttgtcaagctttttctaccattacgctgct 288 Query: 484 g 484 | Sbjct: 287 g 287
>dbj|AK070301.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049M22, full insert sequence Length = 1410 Score = 147 bits (74), Expect = 6e-32 Identities = 281/350 (80%) Strand = Plus / Minus Query: 250 agaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaagtttg 309 ||||||| ||||||||||||| |||||||| |||| || ||||| || ||||| | | Sbjct: 1183 agaaaccgtgaatcttgatgttgtccttcttagcaatcccagcctgaactaggaacgtgg 1124 Query: 310 agacgttcttcctctgatcaccctggagttgaatgacctgtccaagttctgtgtcctgga 369 || ||||| | ||||||||| || || ||||||||||| ||||| |||| || |||| Sbjct: 1123 caacattcttacgctgatcaccttgaagctgaatgacctggccaagctctggatcttgga 1064 Query: 370 caactgtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctgtagctga 429 | || |||||||||||||| ||||| || || || || |||||||||||| |||| ||| Sbjct: 1063 ctacagtaccattgcagcagaactcctttttcagatccttgaggatcttgttgtaactgt 1004 Query: 430 actccttcttcagaccctggacagtggtcaggctcttgcgaccattacgctgctggatgc 489 |||||||||| | ||||| ||||| || || ||||| | || || ||||||||||||| Sbjct: 1003 actccttctttaagccctgaacagtagttagactctttctgccgttgcgctgctggatgc 944 Query: 490 gtacatgcacgtagtcctttgatccggcagctgcaccagcgtccccagcattcgcctcgg 549 | |||||||| || ||||||| ||| | | || || | |||| ||||||| ||||| | Sbjct: 943 gcacatgcacataatcctttgctccagggccagcgccggagtcctcagcatttgcctcag 884 Query: 550 caaaggggtcaaaggcagttgggatctgaacgtcgagatcagacatgaaa 599 |||| || || ||||||| ||| | ||||||||||||||||||||||||| Sbjct: 883 caaacggatcgaaggcagatggaagctgaacgtcgagatcagacatgaaa 834
>gb|BT000649.1| Arabidopsis thaliana putative protein translation factor Sui1 homolog (At1g54290/F20D21_53) mRNA, complete cds Length = 342 Score = 145 bits (73), Expect = 2e-31 Identities = 193/233 (82%) Strand = Plus / Minus Query: 252 aaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaagtttgag 311 |||||||| || || |||| ||||||||||||| || ||||| |||||||| | || Sbjct: 338 aaaccatggatttttatgttatccttcttcacaagcccagcctgaacaaggaacgtagat 279 Query: 312 acgttcttcctctgatcaccctggagttgaatgacctgtccaagttctgtgtcctggaca 371 |||||||||||||||||||| || || ||||| |||||||| | ||| | ||||||||| Sbjct: 278 acgttcttcctctgatcaccttgaagctgaataacctgtcctaattcagagtcctggacg 219 Query: 372 actgtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaac 431 || || ||||||||||| || |||||||| |||||||| || |||||||| ||||| || Sbjct: 218 acggtgccattgcagcagaattctttcttaaggtctttaagtatcttgctatagctatac 159 Query: 432 tccttcttcagaccctggacagtggtcaggctcttgcgaccattacgctgctg 484 || ||||| || ||||||||||| |||| ||| || | ||||||||||||||| Sbjct: 158 tctttcttaagcccctggacagttgtcaagctttttctaccattacgctgctg 106
>gb|DQ083225.1| Oryza sativa (indica cultivar-group) clone 5B11G73 mRNA sequence Length = 268 Score = 143 bits (72), Expect = 9e-31 Identities = 130/147 (88%), Gaps = 3/147 (2%) Strand = Plus / Minus Query: 492 acatgcacgtagtcctttgatccggcagctgcaccagcgtccccagcattcgcctcggca 551 ||||| ||||||||||||||||| ||||| ||||||| ||| |||||||| ||||| ||| Sbjct: 268 acatgaacgtagtcctttgatcctgcagccgcaccagagtctccagcattggcctcagca 209 Query: 552 aaggggtcaaaggcagttgggatctgaacgtcgagatcagacatgaaa-actcctggtga 610 ||||| || ||||||||||||||||||| ||||||||||||||||||| | ||||||| Sbjct: 208 aagggatcgaaggcagttgggatctgaatgtcgagatcagacatgaaactttgctggtga 149 Query: 611 gagtggcaaaagctacaccaagaacct 637 |||||| |||||||||||||||||| Sbjct: 148 aagtggc--aagctacaccaagaacct 124
>ref|XM_475493.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 348 Score = 139 bits (70), Expect = 1e-29 Identities = 277/346 (80%) Strand = Plus / Minus Query: 250 agaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaagtttg 309 ||||||| ||||||||||||| |||||||| |||| || ||||| || ||||| | | Sbjct: 346 agaaaccgtgaatcttgatgttgtccttcttagcaatcccagcctgaactaggaacgtgg 287 Query: 310 agacgttcttcctctgatcaccctggagttgaatgacctgtccaagttctgtgtcctgga 369 || ||||| | ||||||||| || || ||||||||||| ||||| |||| || |||| Sbjct: 286 caacattcttacgctgatcaccttgaagctgaatgacctggccaagctctggatcttgga 227 Query: 370 caactgtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctgtagctga 429 | || |||||||||||||| ||||| || || || || |||||||||||| |||| ||| Sbjct: 226 ctacagtaccattgcagcagaactcctttttcagatccttgaggatcttgttgtaactgt 167 Query: 430 actccttcttcagaccctggacagtggtcaggctcttgcgaccattacgctgctggatgc 489 |||||||||| | ||||| ||||| || || ||||| | || || ||||||||||||| Sbjct: 166 actccttctttaagccctgaacagtagttagactctttctgccgttgcgctgctggatgc 107 Query: 490 gtacatgcacgtagtcctttgatccggcagctgcaccagcgtccccagcattcgcctcgg 549 | |||||||| || ||||||| ||| | | || || | |||| ||||||| ||||| | Sbjct: 106 gcacatgcacataatcctttgctccagggccagcgccggagtcctcagcatttgcctcag 47 Query: 550 caaaggggtcaaaggcagttgggatctgaacgtcgagatcagacat 595 |||| || || ||||||| ||| | ||||||||||||||||||||| Sbjct: 46 caaacggatcgaaggcagatggaagctgaacgtcgagatcagacat 1
>dbj|AK058219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-F05, full insert sequence Length = 731 Score = 139 bits (70), Expect = 1e-29 Identities = 280/350 (80%) Strand = Plus / Minus Query: 250 agaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaagtttg 309 ||||||| ||||||||||||| |||||||| |||| || ||||| || ||||| | | Sbjct: 504 agaaaccgtgaatcttgatgttgtccttcttagcaatcccagcctgaactaggaacgtgg 445 Query: 310 agacgttcttcctctgatcaccctggagttgaatgacctgtccaagttctgtgtcctgga 369 || ||||| | ||||||||| || || ||||||||||| ||||| |||| || |||| Sbjct: 444 caacattcttacgctgatcaccttgaagctgaatgacctggccaagctctggatcttgga 385 Query: 370 caactgtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctgtagctga 429 | || |||||||||||||| ||||| || || || || |||||||||||| |||| ||| Sbjct: 384 ctacagtaccattgcagcagaactcctttttcagatccttgaggatcttgttgtaactgt 325 Query: 430 actccttcttcagaccctggacagtggtcaggctcttgcgaccattacgctgctggatgc 489 |||||||||| | ||||| ||||| || || ||||| | || || ||||||||||||| Sbjct: 324 actccttctttaagccctgaacagtagttagactctttctgccgttgcgctgctggatgc 265 Query: 490 gtacatgcacgtagtcctttgatccggcagctgcaccagcgtccccagcattcgcctcgg 549 |||||||| || ||||||| ||| | | || || | |||| ||||||| ||||| | Sbjct: 264 acacatgcacataatcctttgctccagggccagcgccggagtcctcagcatttgcctcag 205 Query: 550 caaaggggtcaaaggcagttgggatctgaacgtcgagatcagacatgaaa 599 |||| || || ||||||| ||| | ||||||||||||||||||||||||| Sbjct: 204 caaacggatcgaaggcagatggaagctgaacgtcgagatcagacatgaaa 155
>ref|NM_124857.2| Arabidopsis thaliana translation initiation factor AT5G54760 mRNA, complete cds Length = 706 Score = 137 bits (69), Expect = 6e-29 Identities = 195/237 (82%) Strand = Plus / Minus Query: 250 agaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaagtttg 309 |||||||||| |||||||||| ||||||||||| | || |||||||||||||| | | Sbjct: 486 agaaaccatggatcttgatgttatccttcttcaccaaaccagcctggacaaggaatgtgg 427 Query: 310 agacgttcttcctctgatcaccctggagttgaatgacctgtccaagttctgtgtcctgga 369 |||||||||| | || ||||| || || || || |||||||| ||||||| ||||| | Sbjct: 426 agacgttcttacgttggtcaccttgaagctgtataacctgtccgagttctgaatcctgaa 367 Query: 370 caactgtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctgtagctga 429 | || || || |||||||||||||||||||||||||| || || |||||| | |||||| Sbjct: 366 ccacagtgccgttgcagcaaaactctttcttgaggtccttaagtatcttggtatagctgt 307 Query: 430 actccttcttcagaccctggacagtggtcaggctcttgcgaccattacgctgctgga 486 |||| |||||||| |||||||| || |||| ||| || | |||||| |||||||||| Sbjct: 306 actctttcttcaggccctggacggttgtcaagcttttcctaccatttcgctgctgga 250
>gb|BT005836.1| Arabidopsis thaliana At5g54760 gene, complete cds Length = 342 Score = 137 bits (69), Expect = 6e-29 Identities = 195/237 (82%) Strand = Plus / Minus Query: 250 agaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaagtttg 309 |||||||||| |||||||||| ||||||||||| | || |||||||||||||| | | Sbjct: 340 agaaaccatggatcttgatgttatccttcttcaccaaaccagcctggacaaggaatgtgg 281 Query: 310 agacgttcttcctctgatcaccctggagttgaatgacctgtccaagttctgtgtcctgga 369 |||||||||| | || ||||| || || || || |||||||| ||||||| ||||| | Sbjct: 280 agacgttcttacgttggtcaccttgaagctgtataacctgtccgagttctgaatcctgaa 221 Query: 370 caactgtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctgtagctga 429 | || || || |||||||||||||||||||||||||| || || |||||| | |||||| Sbjct: 220 ccacagtgccgttgcagcaaaactctttcttgaggtccttaagtatcttggtatagctgt 161 Query: 430 actccttcttcagaccctggacagtggtcaggctcttgcgaccattacgctgctgga 486 |||| |||||||| |||||||| || |||| ||| || | |||||| |||||||||| Sbjct: 160 actctttcttcaggccctggacggttgtcaagcttttcctaccatttcgctgctgga 104
>gb|DQ222518.1| Solanum tuberosum clone 120A06 unknown mRNA Length = 699 Score = 135 bits (68), Expect = 2e-28 Identities = 179/216 (82%) Strand = Plus / Minus Query: 248 tcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaagtt 307 ||||||||||||||| |||||||| || ||||||||||| || ||||||||||| || | Sbjct: 487 tcagaaaccatgaattttgatgtgctctttcttcacaattccagcctggacaagaaatgt 428 Query: 308 tgagacgttcttcctctgatcaccctggagttgaatgacctgtccaagttctgtgtcctg 367 || |||||||||| ||| ||| |||| |||||||| ||||| || ||||| | ||||| Sbjct: 427 agaaacgttcttccgctggtcatcctgaagttgaataacctggcctagttcaggatcctg 368 Query: 368 gacaactgtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctgtagct 427 || || |||||||||||||| |||||||||||||| || || || |||||| | ||||| Sbjct: 367 aacgacagtaccattgcagcagaactctttcttgagatccttcagtatcttgttatagct 308 Query: 428 gaactccttcttcagaccctggacagtggtcaggct 463 || || ||||||| ||||| ||||| |||||||| Sbjct: 307 aaattctttcttcaacccctgcacagttgtcaggct 272
>dbj|D10959.1|RIC407GS2 Oryza sativa mRNA for GOS2 Length = 366 Score = 125 bits (63), Expect = 2e-25 Identities = 90/99 (90%) Strand = Plus / Minus Query: 238 tggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctgga 297 ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| | Sbjct: 151 tggcagttgctcagaaaccatgattcttgatgtgttccttcttcacaatgccggcctgaa 92 Query: 298 caaggaagtttgagacgttcttcctctgatcaccctgga 336 |||| || |||| ||||| |||||||| |||||||||| Sbjct: 91 caagaaaatttggtacgtttttcctctgttcaccctgga 53
>gb|AY365040.1| Zea mays translation initiation factor-like gene, partial sequence Length = 656 Score = 121 bits (61), Expect = 3e-24 Identities = 163/197 (82%) Strand = Plus / Minus Query: 357 tctgtgtcctggacaactgtaccattgcagcaaaactctttcttgaggtctttgaggatc 416 |||| |||||| || || |||||||||||||| || || ||||| || || ||||||||| Sbjct: 539 tctgggtcctgaactacagtaccattgcagcagaattccttcttcagatccttgaggatc 480 Query: 417 ttgctgtagctgaactccttcttcagaccctggacagtggtcaggctcttgcgaccatta 476 ||| | ||||||||||||||||||||||||||||| || ||||| ||||| | || || Sbjct: 479 ttgttatagctgaactccttcttcagaccctggactgtagtcagactctttctgccgttg 420 Query: 477 cgctgctggatgcgtacatgcacgtagtcctttgatccggcagctgcaccagcgtcccca 536 |||||||||||||| |||||||| || ||||| | ||| | | | ||||||| | || || Sbjct: 419 cgctgctggatgcgcacatgcacataatccttcgttccaggaccagcaccagagccctca 360 Query: 537 gcattcgcctcggcaaa 553 ||||| ||||| ||||| Sbjct: 359 gcatttgcctcagcaaa 343
>emb|AJ309088.1|PPI309088 Pinus pinaster partial mRNA for putative translation factor Length = 635 Score = 115 bits (58), Expect = 2e-22 Identities = 199/246 (80%) Strand = Plus / Minus Query: 273 tccttcttcacaatgcccgcctggacaaggaagtttgagacgttcttcctctgatcaccc 332 ||||| |||||||| || ||||| |||||||| ||||| || || || | ||||||||| Sbjct: 511 tcctttttcacaattccagcctgtacaaggaaatttgaaacatttttacgttgatcaccc 452 Query: 333 tggagttgaatgacctgtccaagttctgtgtcctggacaactgtaccattgcagcaaaac 392 || || ||||| ||||| |||||||| | ||||| ||||| || ||||| || ||||| Sbjct: 451 tgtagctgaatcacctgcccaagttcaggatcctgcacaacagtcccattacaacaaaat 392 Query: 393 tctttcttgaggtctttgaggatcttgctgtagctgaactccttcttcagaccctggaca 452 ||||| |||||||||||||| || ||| ||||||| || |||||| | | ||| || ||| Sbjct: 391 tcttttttgaggtctttgagaattttgttgtagctaaattccttccttaaaccttgcaca 332 Query: 453 gtggtcaggctcttgcgaccattacgctgctggatgcgtacatgcacgtagtcctttgat 512 || ||||| ||||| | ||| || |||||||| ||||| |||||||| || || || ||| Sbjct: 331 gttgtcagactctttctaccgttgcgctgctgtatgcgcacatgcacatattctttagat 272 Query: 513 ccggca 518 |||||| Sbjct: 271 ccggca 266
>gb|AC146555.5| Medicago truncatula clone mth2-10p14, complete sequence Length = 127640 Score = 111 bits (56), Expect = 3e-21 Identities = 131/156 (83%) Strand = Plus / Minus Query: 357 tctgtgtcctggacaactgtaccattgcagcaaaactctttcttgaggtctttgaggatc 416 |||| ||||||||||||||||||||| || |||||||| ||||| |||||||| || ||| Sbjct: 53683 tctgggtcctggacaactgtaccattacaacaaaactccttcttaaggtctttcagaatc 53624 Query: 417 ttgctgtagctgaactccttcttcagaccctggacagtggtcaggctcttgcgaccatta 476 ||| |||| ||||| || ||||||| ||||||||||| |||| ||| || | |||||| Sbjct: 53623 ttgttgtaactgaattctttcttcaatccctggacagttgtcaagctttttctaccattt 53564 Query: 477 cgctgctggatgcgtacatgcacgtagtcctttgat 512 |||||||| || || | ||| ||||| ||||||||| Sbjct: 53563 cgctgctgtatacgaatatggacgtactcctttgat 53528 Score = 54.0 bits (27), Expect = 7e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 245 tgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctg 295 |||||||||||||||||| || || || |||||||||||||| || ||||| Sbjct: 54774 tgctcagaaaccatgaattttaatatgctccttcttcacaattccagcctg 54724
>emb|AJ519840.1|CAR519840 Coffea arabica sui1 gene, exons 1-5 Length = 2677 Score = 111 bits (56), Expect = 3e-21 Identities = 140/168 (83%) Strand = Plus / Minus Query: 344 gacctgtccaagttctgtgtcctggacaactgtaccattgcagcaaaactctttcttgag 403 |||||| || ||||||| ||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 2127 gacctggcctagttctgggtcttggacaacagtaccattgcagcaaaactctttcttgag 2068 Query: 404 gtctttgaggatcttgctgtagctgaactccttcttcagaccctggacagtggtcaggct 463 ||| || ||||| || |||| |||||||| || |||| || || ||||| |||||||| Sbjct: 2067 gtccttcaggattttattgtaactgaactctttgttcaacccttgcacagtagtcaggct 2008 Query: 464 cttgcgaccattacgctgctggatgcgtacatgcacgtagtcctttga 511 || | ||||||||| || ||||| || | |||||| || |||||||| Sbjct: 2007 tttcctaccattacgttgttggatacggatatgcacataatcctttga 1960 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Minus Query: 253 aaccatgaatcttgatgtgttccttctt 280 ||||||||||||| |||||||||||||| Sbjct: 2632 aaccatgaatctttatgtgttccttctt 2605 Score = 42.1 bits (21), Expect = 2.5 Identities = 48/57 (84%) Strand = Plus / Minus Query: 292 cctggacaaggaagtttgagacgttcttcctctgatcaccctggagttgaatgacct 348 |||| |||||||| |||| || ||||| | |||||| || |||||||||||||||| Sbjct: 2265 cctgaacaaggaaacttgaaacattcttacgctgatccccttggagttgaatgacct 2209
>gb|L41693.1|PS300016E Eucalyptus globulus bicostata symbiont (F00058) mRNA, ESTun016 Length = 256 Score = 105 bits (53), Expect = 2e-19 Identities = 95/109 (87%) Strand = Plus / Minus Query: 378 ccattgcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttc 437 |||||||||||||| | |||||| ||||| ||||| |||||| | ||||||||||||||| Sbjct: 237 ccattgcagcaaaattgtttcttcaggtccttgagtatcttgttatagctgaactccttc 178 Query: 438 ttcagaccctggacagtggtcaggctcttgcgaccattacgctgctgga 486 |||||||| || |||||||||| ||| || | |||||| |||||||||| Sbjct: 177 ttcagaccttgcacagtggtcaagcttttcctaccattgcgctgctgga 129
>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66 Length = 198372 Score = 99.6 bits (50), Expect = 1e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 345 acctgtccaagttctgtgtcctggacaactgtaccattgcagcaaaactctttcttgagg 404 |||||||| ||||||| ||| || || || || || ||||||||||| |||||||||||| Sbjct: 108970 acctgtccgagttctgagtcttgaaccacagttccgttgcagcaaaattctttcttgagg 109029 Query: 405 tctttgaggatcttgctgtagctgaactccttcttcagaccctggacagtggtcaggctc 464 || || || |||||| |||||||| |||| |||||||| |||||||| || |||| ||| Sbjct: 109030 tccttaagtatcttggtgtagctgtactctttcttcagcccctggaccgttgtcaagctt 109089 Query: 465 ttgcgaccattacgctgctgga 486 || | |||||| |||||||||| Sbjct: 109090 ttcctaccattccgctgctgga 109111 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Plus Query: 245 tgctcagaaaccatgaatcttgatgtgttccttcttcacaa 285 ||||||||||||||| |||||||||| || |||||||||| Sbjct: 108666 tgctcagaaaccatggatcttgatgttatctttcttcacaa 108706 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 292 cctggacaaggaagtttgagacgttcttcctctgatc 328 ||||||| ||||| | |||||||||||||||||||| Sbjct: 108793 cctggactaggaacgtggagacgttcttcctctgatc 108829
>emb|AL035680.1|ATT24A18 Arabidopsis thaliana DNA chromosome 4, BAC clone T24A18, partial sequence (ESSA project) Length = 45980 Score = 99.6 bits (50), Expect = 1e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 345 acctgtccaagttctgtgtcctggacaactgtaccattgcagcaaaactctttcttgagg 404 |||||||| ||||||| ||| || || || || || ||||||||||| |||||||||||| Sbjct: 25459 acctgtccgagttctgagtcttgaaccacagttccgttgcagcaaaattctttcttgagg 25518 Query: 405 tctttgaggatcttgctgtagctgaactccttcttcagaccctggacagtggtcaggctc 464 || || || |||||| |||||||| |||| |||||||| |||||||| || |||| ||| Sbjct: 25519 tccttaagtatcttggtgtagctgtactctttcttcagcccctggaccgttgtcaagctt 25578 Query: 465 ttgcgaccattacgctgctgga 486 || | |||||| |||||||||| Sbjct: 25579 ttcctaccattccgctgctgga 25600 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Plus Query: 245 tgctcagaaaccatgaatcttgatgtgttccttcttcacaa 285 ||||||||||||||| |||||||||| || |||||||||| Sbjct: 25155 tgctcagaaaccatggatcttgatgttatctttcttcacaa 25195 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 292 cctggacaaggaagtttgagacgttcttcctctgatc 328 ||||||| ||||| | |||||||||||||||||||| Sbjct: 25282 cctggactaggaacgtggagacgttcttcctctgatc 25318
>dbj|AB005232.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBG8 Length = 80315 Score = 99.6 bits (50), Expect = 1e-17 Identities = 119/142 (83%) Strand = Plus / Minus Query: 345 acctgtccaagttctgtgtcctggacaactgtaccattgcagcaaaactctttcttgagg 404 |||||||| ||||||| ||||| || || || || |||||||||||||||||||||||| Sbjct: 4167 acctgtccgagttctgaatcctgaaccacagtgccgttgcagcaaaactctttcttgagg 4108 Query: 405 tctttgaggatcttgctgtagctgaactccttcttcagaccctggacagtggtcaggctc 464 || || || |||||| | |||||| |||| |||||||| |||||||| || |||| ||| Sbjct: 4107 tccttaagtatcttggtatagctgtactctttcttcaggccctggacggttgtcaagctt 4048 Query: 465 ttgcgaccattacgctgctgga 486 || | |||||| |||||||||| Sbjct: 4047 ttcctaccatttcgctgctgga 4026 Score = 44.1 bits (22), Expect = 0.63 Identities = 31/34 (91%) Strand = Plus / Minus Query: 250 agaaaccatgaatcttgatgtgttccttcttcac 283 |||||||||| |||||||||| ||||||||||| Sbjct: 4518 agaaaccatggatcttgatgttatccttcttcac 4485
>gb|U81042.1|ATU81042 Arabidopsis thaliana translation initiation factor gene, complete cds Length = 1787 Score = 99.6 bits (50), Expect = 1e-17 Identities = 119/142 (83%) Strand = Plus / Minus Query: 345 acctgtccaagttctgtgtcctggacaactgtaccattgcagcaaaactctttcttgagg 404 |||||||| ||||||| ||| || || || || || ||||||||||| |||||||||||| Sbjct: 1298 acctgtccgagttctgagtcttgaaccacagttccgttgcagcaaaattctttcttgagg 1239 Query: 405 tctttgaggatcttgctgtagctgaactccttcttcagaccctggacagtggtcaggctc 464 || || || |||||| |||||||| |||| |||||||| |||||||| || |||| ||| Sbjct: 1238 tccttaagtatcttggtgtagctgtactctttcttcagcccctggaccgttgtcaagctt 1179 Query: 465 ttgcgaccattacgctgctgga 486 || | |||||| |||||||||| Sbjct: 1178 ttcctaccattccgctgctgga 1157 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 245 tgctcagaaaccatgaatcttgatgtgttccttcttcacaa 285 ||||||||||||||| |||||||||| || |||||||||| Sbjct: 1602 tgctcagaaaccatggatcttgatgttatctttcttcacaa 1562 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 292 cctggacaaggaagtttgagacgttcttcctctgatc 328 ||||||| ||||| | |||||||||||||||||||| Sbjct: 1475 cctggactaggaacgtggagacgttcttcctctgatc 1439
>gb|AC005287.4| Arabidopsis thaliana chromosome I BAC F20D21 genomic sequence, complete sequence Length = 143186 Score = 95.6 bits (48), Expect = 2e-16 Identities = 117/140 (83%) Strand = Plus / Plus Query: 345 acctgtccaagttctgtgtcctggacaactgtaccattgcagcaaaactctttcttgagg 404 |||||||| | ||| | ||||||||| || || ||||||||||| || |||||||| ||| Sbjct: 40496 acctgtcctaattcagagtcctggacgacggtgccattgcagcagaattctttcttaagg 40555 Query: 405 tctttgaggatcttgctgtagctgaactccttcttcagaccctggacagtggtcaggctc 464 ||||| || |||||||| ||||| |||| ||||| || ||||||||||| |||| ||| Sbjct: 40556 tctttaagtatcttgctatagctatactctttcttaagcccctggacagttgtcaagctt 40615 Query: 465 ttgcgaccattacgctgctg 484 || | ||||||||||||||| Sbjct: 40616 tttctaccattacgctgctg 40635 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 312 acgttcttcctctgatcaccctggagttgaatgacct 348 |||||||||||||||||||| || || ||||| |||| Sbjct: 40382 acgttcttcctctgatcaccttgaagctgaataacct 40418 Score = 40.1 bits (20), Expect = 9.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 559 caaaggcagttgggatctgaacgtcgagatcagacatgaa 598 |||||||||| |||| ||||| || |||||||||||||| Sbjct: 40852 caaaggcagtggggacttgaacttcaagatcagacatgaa 40891
>gb|AC130605.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0010D04, complete sequence Length = 122599 Score = 83.8 bits (42), Expect = 7e-13 Identities = 135/166 (81%) Strand = Plus / Minus Query: 345 acctgtccaagttctgtgtcctggacaactgtaccattgcagcaaaactctttcttgagg 404 ||||| ||||| |||| || ||||| || |||||||||||||| ||||| || || || Sbjct: 79955 acctggccaagctctggatcttggactacagtaccattgcagcagaactcctttttcaga 79896 Query: 405 tctttgaggatcttgctgtagctgaactccttcttcagaccctggacagtggtcaggctc 464 || |||||||||||| |||| ||| |||||||||| | ||||| ||||| || || ||| Sbjct: 79895 tccttgaggatcttgttgtaactgtactccttctttaagccctgaacagtagttagactc 79836 Query: 465 ttgcgaccattacgctgctggatgcgtacatgcacgtagtcctttg 510 || | || || |||||||||||||| |||||||| || ||||||| Sbjct: 79835 tttctgccgttgcgctgctggatgcgcacatgcacataatcctttg 79790 Score = 54.0 bits (27), Expect = 7e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 561 aaggcagttgggatctgaacgtcgagatcagacatgaaa 599 ||||||| ||| | ||||||||||||||||||||||||| Sbjct: 79415 aaggcagatggaagctgaacgtcgagatcagacatgaaa 79377
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 83.8 bits (42), Expect = 7e-13 Identities = 135/166 (81%) Strand = Plus / Minus Query: 345 acctgtccaagttctgtgtcctggacaactgtaccattgcagcaaaactctttcttgagg 404 ||||| ||||| |||| || ||||| || |||||||||||||| ||||| || || || Sbjct: 24394165 acctggccaagctctggatcttggactacagtaccattgcagcagaactcctttttcaga 24394106 Query: 405 tctttgaggatcttgctgtagctgaactccttcttcagaccctggacagtggtcaggctc 464 || |||||||||||| |||| ||| |||||||||| | ||||| ||||| || || ||| Sbjct: 24394105 tccttgaggatcttgttgtaactgtactccttctttaagccctgaacagtagttagactc 24394046 Query: 465 ttgcgaccattacgctgctggatgcgtacatgcacgtagtcctttg 510 || | || || |||||||||||||| |||||||| || ||||||| Sbjct: 24394045 tttctgccgttgcgctgctggatgcgcacatgcacataatcctttg 24394000 Score = 54.0 bits (27), Expect = 7e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 561 aaggcagttgggatctgaacgtcgagatcagacatgaaa 599 ||||||| ||| | ||||||||||||||||||||||||| Sbjct: 24393625 aaggcagatggaagctgaacgtcgagatcagacatgaaa 24393587
>gb|AY617076.1| Bassia scoparia putative translation initiation factor mRNA, partial cds Length = 207 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 381 ttgcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttc 440 |||||||| ||||| || |||||||||||||| ||||| ||||||||| ||||||||| Sbjct: 74 ttgcagcagaactcctttttgaggtctttgagtatcttctcgtagctgaaatccttcttc 15 Query: 441 agaccctggacagt 454 ||||| || ||||| Sbjct: 14 agaccttgaacagt 1
>ref|NM_190883.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 360 Score = 65.9 bits (33), Expect = 2e-07 Identities = 213/273 (78%) Strand = Plus / Minus Query: 323 ctgatcaccctggagttgaatgacctgtccaagttctgtgtcctggacaactgtaccatt 382 ||||||||| || |||||||||||||| || | |||| || ||||| || |||||||| Sbjct: 273 ctgatcaccttgaagttgaatgacctggcctaactctggatcttggactacagtaccatt 214 Query: 383 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttcag 442 || || || || || || || || |||||||| ||| |||| ||| |||| ||||||| Sbjct: 213 acaacagaattcctttttcagatccttgaggattttgttgtaactgtactctttcttcaa 154 Query: 443 accctggacagtggtcaggctcttgcgaccattacgctgctggatgcgtacatgcacgta 502 ||||| ||||| ||||| ||||| | || || |||||||| ||||| || || || || Sbjct: 153 gccctgaacagtagtcagactctttcttccgttgcgctgctgaatgcgcacgtgtacata 94 Query: 503 gtcctttgatccggcagctgcaccagcgtccccagcattcgcctcggcaaaggggtcaaa 562 |||||||||||| ||| | | | | |||| ||||||| || || ||||| || ||||| Sbjct: 93 gtcctttgatccagcaccaacgctggagtcctcagcattggcttccgcaaacggatcaaa 34 Query: 563 ggcagttgggatctgaacgtcgagatcagacat 595 || | ||| | ||| ||||||||||||||||| Sbjct: 33 agctgatggaagctggacgtcgagatcagacat 1
>gb|AF521961.1| Helianthus annuus translation initiation factor B04 mRNA, complete cds Length = 621 Score = 60.0 bits (30), Expect = 1e-05 Identities = 72/86 (83%) Strand = Plus / Minus Query: 363 tcctggacaactgtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctg 422 ||||| ||||| || ||||| ||||| || ||||||||||| |||||||| || || | Sbjct: 317 tcctgcacaacagtgccattacagcagaattctttcttgagatctttgagaattttatcg 258 Query: 423 tagctgaactccttcttcagaccctg 448 ||||||| |||||| ||||||||||| Sbjct: 257 tagctgagctcctttttcagaccctg 232
>gb|AF091857.1|AF091857 Pimpinella brachycarpa protein translation factor SUI1 homolog mRNA, complete cds Length = 533 Score = 58.0 bits (29), Expect = 4e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 264 ttgatgtgttccttcttcacaatgcccgcctggacaaggaagtttgagacgttcttcctc 323 ||||| || |||||||| ||||| || |||||||||| ||| | ||||||||||| | | Sbjct: 373 ttgatctgatccttcttgacaatcccagcctggacaatgaaagtggagacgttcttgcgc 314 Query: 324 tgatcaccctggagttgaatgacct 348 ||||| || || ||||||||||||| Sbjct: 313 tgatcgccttgaagttgaatgacct 289
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 54.0 bits (27), Expect = 7e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 408 ttgaggatcttgctgtagctgaactccttcttcagaccctggacagtggtcaggctcttg 467 |||||||| ||| |||| ||| |||| ||||||| ||||| ||||| ||||| ||||| Sbjct: 33644976 ttgaggattttgttgtaactgtactctttcttcaagccctgaacagtagtcagactcttt 33645035 Query: 468 cgaccattacgctgctggatgcgtacatgcacgtagtcctttgatcc 514 | || || |||||||| ||||| || || || |||||||||||||| Sbjct: 33645036 cttccgttgcgctgctgaatgcgcacgtgtacatagtcctttgatcc 33645082 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 579 acgtcgagatcagacatgaaa 599 ||||||||||||||||||||| Sbjct: 33645456 acgtcgagatcagacatgaaa 33645476
>dbj|AP003290.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684C02 Length = 80086 Score = 54.0 bits (27), Expect = 7e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 408 ttgaggatcttgctgtagctgaactccttcttcagaccctggacagtggtcaggctcttg 467 |||||||| ||| |||| ||| |||| ||||||| ||||| ||||| ||||| ||||| Sbjct: 59848 ttgaggattttgttgtaactgtactctttcttcaagccctgaacagtagtcagactcttt 59907 Query: 468 cgaccattacgctgctggatgcgtacatgcacgtagtcctttgatcc 514 | || || |||||||| ||||| || || || |||||||||||||| Sbjct: 59908 cttccgttgcgctgctgaatgcgcacgtgtacatagtcctttgatcc 59954 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 579 acgtcgagatcagacatgaaa 599 ||||||||||||||||||||| Sbjct: 60328 acgtcgagatcagacatgaaa 60348
>emb|AJ718439.1| Nicotiana tabacum cDNA-AFLP-fragment BSTC1-12-240, cultivar Bright Yellow 2 Length = 188 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Minus Query: 248 tcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaag 301 ||||||||||||||| |||||||| || |||||||| || | ||||||||||| Sbjct: 94 tcagaaaccatgaattttgatgtgctctttcttcacgatttcagcctggacaag 41
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/61 (85%) Strand = Plus / Plus Query: 375 gtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactcc 434 |||||||||||||| || || || || || || |||||||||||| |||| ||||||||| Sbjct: 2840983 gtaccattgcagcagaattcctttttcagatcattgaggatcttgttgtaactgaactcc 2841042 Query: 435 t 435 | Sbjct: 2841043 t 2841043
>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0050G13 Length = 150685 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/61 (85%) Strand = Plus / Plus Query: 375 gtaccattgcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactcc 434 |||||||||||||| || || || || || || |||||||||||| |||| ||||||||| Sbjct: 109211 gtaccattgcagcagaattcctttttcagatcattgaggatcttgttgtaactgaactcc 109270 Query: 435 t 435 | Sbjct: 109271 t 109271
>ref|XM_389056.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08880.1) partial mRNA Length = 588 Score = 48.1 bits (24), Expect = 0.040 Identities = 45/52 (86%) Strand = Plus / Minus Query: 441 agaccctggacagtggtcaggctcttgcgaccattacgctgctggatgcgta 492 |||||||| |||||||||| |||| || |||||||||||||| ||||||| Sbjct: 386 agaccctgaacagtggtcaaagtcttacgtccattacgctgctgaatgcgta 335
>ref|XM_687061.1| PREDICTED: Danio rerio similar to beta-catenin 2 (LOC563701), mRNA Length = 3471 Score = 48.1 bits (24), Expect = 0.040 Identities = 24/24 (100%) Strand = Plus / Minus Query: 516 gcagctgcaccagcgtccccagca 539 |||||||||||||||||||||||| Sbjct: 1321 gcagctgcaccagcgtccccagca 1298
>gb|BC056276.1| Danio rerio catenin, beta 2, mRNA (cDNA clone MGC:65770 IMAGE:6789078), complete cds Length = 3600 Score = 48.1 bits (24), Expect = 0.040 Identities = 24/24 (100%) Strand = Plus / Minus Query: 516 gcagctgcaccagcgtccccagca 539 |||||||||||||||||||||||| Sbjct: 1386 gcagctgcaccagcgtccccagca 1363
>ref|XM_959252.1| Neurospora crassa OR74A hypothetical protein (NCU01981.1) partial mRNA Length = 510 Score = 44.1 bits (22), Expect = 0.63 Identities = 37/42 (88%) Strand = Plus / Minus Query: 443 accctggacagtggtcaggctcttgcgaccattacgctgctg 484 ||||||||| || |||| | ||||||| |||||||||||||| Sbjct: 300 accctggacggtagtcaaggtcttgcgtccattacgctgctg 259
>ref|XM_329170.1| Neurospora crassa OR74A hypothetical protein (NCU01981.1) partial mRNA Length = 510 Score = 44.1 bits (22), Expect = 0.63 Identities = 37/42 (88%) Strand = Plus / Minus Query: 443 accctggacagtggtcaggctcttgcgaccattacgctgctg 484 ||||||||| || |||| | ||||||| |||||||||||||| Sbjct: 300 accctggacggtagtcaaggtcttgcgtccattacgctgctg 259
>ref|XM_967678.1| PREDICTED: Tribolium castaneum similar to Protein translation factor SUI1 homolog (LOC661525), mRNA Length = 821 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 447 tggacagtggtcaggctcttgcgaccattacgctgctggat 487 ||||||||||| || ||||||||||||| || |||||||| Sbjct: 240 tggacagtggttagagtcttgcgaccatttcgttgctggat 200
>emb|AL035065.1|SPBC23G7 S.pombe chromosome II cosmid c23G7 Length = 35694 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 agaaaccatgaatcttgatgt 270 ||||||||||||||||||||| Sbjct: 11952 agaaaccatgaatcttgatgt 11932
>ref|NM_001021768.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC23G7.05), partial mRNA Length = 330 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 agaaaccatgaatcttgatgt 270 ||||||||||||||||||||| Sbjct: 328 agaaaccatgaatcttgatgt 308
>dbj|AB001574.1| Schizosaccharomyces pombe DNA for SUI1 homologue, complete cds Length = 1904 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 agaaaccatgaatcttgatgt 270 ||||||||||||||||||||| Sbjct: 996 agaaaccatgaatcttgatgt 976
>gb|AY441361.1| Armigeres subalbatus ASAP ID: 39747 translation initiation factor mRNA sequence Length = 747 Score = 40.1 bits (20), Expect = 9.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 444 ccctggacagtggtcaggctcttgcgaccattacgctgctggat 487 |||||||||||||| || | ||||||||||| | ||||||||| Sbjct: 351 ccctggacagtggttagtgttttgcgaccatttctctgctggat 308
>ref|XM_368624.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00620.4) partial mRNA Length = 1521 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 552 aaggggtcaaaggcagttgggatc 575 |||||||||||||||||| ||||| Sbjct: 1172 aaggggtcaaaggcagtttggatc 1195
>gb|AC158542.2| Pan troglodytes BAC clone CH251-262O17 from chromosome y, complete sequence Length = 174274 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 cttcttcagaccctggacagtggt 457 |||||| ||||||||||||||||| Sbjct: 163680 cttcttgagaccctggacagtggt 163703
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 ttcttgaggtctttgaggat 415 |||||||||||||||||||| Sbjct: 659489 ttcttgaggtctttgaggat 659470
>ref|XM_756105.1| Ustilago maydis 521 hypothetical protein (UM05051.1) partial mRNA Length = 1497 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 641 aggcggtagaggaggaagag 660 |||||||||||||||||||| Sbjct: 133 aggcggtagaggaggaagag 114
>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence Length = 3214944 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 ctgatcaccctggagttgaa 342 |||||||||||||||||||| Sbjct: 2031081 ctgatcaccctggagttgaa 2031062
>gb|AC127353.3| Mus musculus BAC clone RP23-81P21 from chromosome 18, complete sequence Length = 225658 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 647 tagaggaggaagagatcagccaag 670 |||| ||||||||||||||||||| Sbjct: 196719 tagaagaggaagagatcagccaag 196742
>gb|AC124383.3| Mus musculus BAC clone RP24-411E14 from chromosome 18, complete sequence Length = 175177 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 647 tagaggaggaagagatcagccaag 670 |||| ||||||||||||||||||| Sbjct: 156582 tagaagaggaagagatcagccaag 156559
>emb|Z82081.1|CEW09H1 Caenorhabditis elegans Cosmid W09H1, complete sequence Length = 30827 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 532 ccccagcattcgcctcggca 551 |||||||||||||||||||| Sbjct: 6873 ccccagcattcgcctcggca 6854
>gb|AY232164.1| Drosophila yakuba clone yak-ad_CG17737 mRNA sequence Length = 330 Score = 40.1 bits (20), Expect = 9.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 444 ccctggacagtggtcaggctcttgcgaccattacgctgctggat 487 |||||||||||||| || |||||||||| || | ||||||||| Sbjct: 137 ccctggacagtggttagcgtcttgcgaccgttcctctgctggat 94
>gb|AC079763.7| Homo sapiens BAC clone RP11-153N17 from 7, complete sequence Length = 157848 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 gagttgaatgacctgtccaa 354 |||||||||||||||||||| Sbjct: 94484 gagttgaatgacctgtccaa 94503
>gb|AC161500.4| Mus musculus chromosome 7, clone RP23-145H5, complete sequence Length = 223833 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 atcaccctggagttgaatga 345 |||||||||||||||||||| Sbjct: 124365 atcaccctggagttgaatga 124346
>ref|NM_001001889.1| Danio rerio catenin, beta 2 (ctnnb2), mRNA Length = 3550 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 516 gcagctgcaccagcgtccccagca 539 |||||||||||||||| ||||||| Sbjct: 1389 gcagctgcaccagcgtgcccagca 1366
>emb|AL109920.15|HSDJ335E1 Human DNA sequence from clone RP3-335E1 on chromosome 6q16.2-21 Contains a CpG island, complete sequence Length = 143805 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 aaaccatgaatcttgatgtg 271 |||||||||||||||||||| Sbjct: 62976 aaaccatgaatcttgatgtg 62957
>gb|DQ144993.1| Homo sapiens macrophage scavenger receptor 1 (MSR1) gene, complete cds Length = 88838 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 aggatcttgctgtagctgaa 430 |||||||||||||||||||| Sbjct: 44116 aggatcttgctgtagctgaa 44097
>emb|BX927149.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 2/10 Length = 349887 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gtttgagacgttcttcctct 324 |||||||||||||||||||| Sbjct: 123167 gtttgagacgttcttcctct 123186
>dbj|BS000567.1| Pan troglodytes chromosome Y clone:PTFY-001J22, complete sequences Length = 31289 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 cttcttcagaccctggacagtggt 457 |||||| ||||||||||||||||| Sbjct: 2404 cttcttgagaccctggacagtggt 2381
>gb|BC114257.1| Danio rerio cDNA clone IMAGE:7993163, partial cds Length = 2315 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 516 gcagctgcaccagcgtccccagca 539 |||||||||||||||| ||||||| Sbjct: 138 gcagctgcaccagcgtgcccagca 115
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 cttcttcagaccctggacagtggt 457 |||||| ||||||||||||||||| Sbjct: 10187053 cttcttgagaccctggacagtggt 10187076
>gb|AF329680.1| Danio rerio beta-catenin 2 mRNA, complete cds Length = 3550 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 516 gcagctgcaccagcgtccccagca 539 |||||||||||||||| ||||||| Sbjct: 1389 gcagctgcaccagcgtgcccagca 1366
>gb|AC097725.2| Drosophila melanogaster 3L BAC RP98-48E19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 176521 Score = 40.1 bits (20), Expect = 9.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 444 ccctggacagtggtcaggctcttgcgaccattacgctgctggat 487 |||||||||||||| || |||||||||| || | ||||||||| Sbjct: 166877 ccctggacagtggttagcgtcttgcgaccgttcctctgctggat 166834
>gb|DP000055.1| Pan troglodytes chromosome Y chry_random_1 genomic scaffold Length = 276070 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 cttcttcagaccctggacagtggt 457 |||||| ||||||||||||||||| Sbjct: 101122 cttcttgagaccctggacagtggt 101145
>gb|DP000056.1| Pan troglodytes chromosome Y chry_random_3 genomic scaffold Length = 331329 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 cttcttcagaccctggacagtggt 457 |||||| ||||||||||||||||| Sbjct: 164426 cttcttgagaccctggacagtggt 164449
>gb|AC164571.3| Pan troglodytes BAC clone CH251-967O8 from chromosome y, complete sequence Length = 225200 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 cttcttcagaccctggacagtggt 457 |||||| ||||||||||||||||| Sbjct: 180168 cttcttgagaccctggacagtggt 180191
>ref|NM_139535.2| Drosophila melanogaster CG17737-RA (CG17737), mRNA Length = 726 Score = 40.1 bits (20), Expect = 9.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 444 ccctggacagtggtcaggctcttgcgaccattacgctgctggat 487 |||||||||||||| || |||||||||| || | ||||||||| Sbjct: 286 ccctggacagtggttagcgtcttgcgaccgttcctctgctggat 243
>gb|AY095068.1| Drosophila melanogaster RE14985 full insert cDNA Length = 688 Score = 40.1 bits (20), Expect = 9.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 444 ccctggacagtggtcaggctcttgcgaccattacgctgctggat 487 |||||||||||||| || |||||||||| || | ||||||||| Sbjct: 286 ccctggacagtggttagcgtcttgcgaccgttcctctgctggat 243
>gb|AC023396.4| Homo sapiens chromosome 8, clone RP11-545M21, complete sequence Length = 165770 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 aggatcttgctgtagctgaa 430 |||||||||||||||||||| Sbjct: 53049 aggatcttgctgtagctgaa 53030
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 tcttcctctgatcaccctgg 335 |||||||||||||||||||| Sbjct: 3620667 tcttcctctgatcaccctgg 3620686
>ref|NM_001027231.1| Caenorhabditis elegans W09H1.1a (W09H1.1) mRNA, complete cds Length = 1222 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 ccccagcattcgcctcggca 551 |||||||||||||||||||| Sbjct: 990 ccccagcattcgcctcggca 1009
>ref|NM_001027232.1| Caenorhabditis elegans W09H1.1b (W09H1.1) mRNA, complete cds Length = 1279 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 ccccagcattcgcctcggca 551 |||||||||||||||||||| Sbjct: 956 ccccagcattcgcctcggca 975
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 638 cggaggcggtagaggaggaa 657 |||||||||||||||||||| Sbjct: 14706333 cggaggcggtagaggaggaa 14706314
>gb|AC175060.2| Pan troglodytes BAC clone CH251-724O9 from chromosome y, complete sequence Length = 196548 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 cttcttcagaccctggacagtggt 457 |||||| ||||||||||||||||| Sbjct: 21583 cttcttgagaccctggacagtggt 21606
>gb|AC155817.2| Mus musculus BAC clone RP23-473M8 from chromosome 12, complete sequence Length = 159497 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 592 acatgaaaactcctggtgagagtggcaa 619 ||||||||||||||||||| | |||||| Sbjct: 128351 acatgaaaactcctggtgaaactggcaa 128378
>gb|AC146446.3| Pan troglodytes BAC clone RP43-5P22 from chromosome 7, complete sequence Length = 164152 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 gagttgaatgacctgtccaa 354 |||||||||||||||||||| Sbjct: 99611 gagttgaatgacctgtccaa 99630
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gtttgagacgttcttcctct 324 |||||||||||||||||||| Sbjct: 471189 gtttgagacgttcttcctct 471208
>gb|AC163766.3| Pan troglodytes BAC clone CH251-115P4 from chromosome y, complete sequence Length = 185225 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 cttcttcagaccctggacagtggt 457 |||||| ||||||||||||||||| Sbjct: 44099 cttcttgagaccctggacagtggt 44076
>gb|AC163726.3| Pan troglodytes BAC clone CH251-653B19 from chromosome y, complete sequence Length = 207364 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 cttcttcagaccctggacagtggt 457 |||||| ||||||||||||||||| Sbjct: 40475 cttcttgagaccctggacagtggt 40498
>gb|AC167420.1| Mus musculus BAC clone RP23-239F23 from chromosome 12, complete sequence Length = 185684 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 592 acatgaaaactcctggtgagagtggcaa 619 ||||||||||||||||||| | |||||| Sbjct: 67145 acatgaaaactcctggtgaaactggcaa 67172
>gb|AC138272.11| Mus musculus chromosome 7, clone RP23-91H13, complete sequence Length = 234237 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 atcaccctggagttgaatga 345 |||||||||||||||||||| Sbjct: 176605 atcaccctggagttgaatga 176624
>gb|AC163728.4| Pan troglodytes BAC clone CH251-589C1 from chromosome y, complete sequence Length = 206451 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 cttcttcagaccctggacagtggt 457 |||||| ||||||||||||||||| Sbjct: 36508 cttcttgagaccctggacagtggt 36531
>gb|AC163716.3| Pan troglodytes BAC clone CH251-828J24 from chromosome y, complete sequence Length = 165274 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 cttcttcagaccctggacagtggt 457 |||||| ||||||||||||||||| Sbjct: 130064 cttcttgagaccctggacagtggt 130041
>gb|AE003477.3| Drosophila melanogaster chromosome 3L, section 11 of 83 of the complete sequence Length = 297894 Score = 40.1 bits (20), Expect = 9.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 444 ccctggacagtggtcaggctcttgcgaccattacgctgctggat 487 |||||||||||||| || |||||||||| || | ||||||||| Sbjct: 152999 ccctggacagtggttagcgtcttgcgaccgttcctctgctggat 152956
>gb|AC159275.6| Mus musculus BAC clone RP23-367C13 from chromosome 8, complete sequence Length = 195034 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 663 cagccaagaacttctcccgg 682 |||||||||||||||||||| Sbjct: 99795 cagccaagaacttctcccgg 99776
>gb|AC163727.3| Pan troglodytes BAC clone CH251-1132L6 from chromosome y, complete sequence Length = 191546 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 cttcttcagaccctggacagtggt 457 |||||| ||||||||||||||||| Sbjct: 101111 cttcttgagaccctggacagtggt 101134
>gb|AE000512.1| Thermotoga maritima MSB8, complete genome Length = 1860725 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 agcaaaactctttcttgagg 404 |||||||||||||||||||| Sbjct: 430718 agcaaaactctttcttgagg 430737
>emb|AL606443.3|OSJN00008 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026L04, complete sequence Length = 129563 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 638 cggaggcggtagaggaggaa 657 |||||||||||||||||||| Sbjct: 45987 cggaggcggtagaggaggaa 45968 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,195,248 Number of Sequences: 3902068 Number of extensions: 6195248 Number of successful extensions: 115340 Number of sequences better than 10.0: 117 Number of HSP's better than 10.0 without gapping: 117 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 114764 Number of HSP's gapped (non-prelim): 546 length of query: 719 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 696 effective length of database: 17,143,297,704 effective search space: 11931735201984 effective search space used: 11931735201984 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)