Clone Name | rbasd21m12 |
---|---|
Clone Library Name | barley_pub |
>gb|AY090542.1| Deschampsia antarctica clone Dacor 1.7 alanine aminotransferase mRNA, 3' UTR and partial cds Length = 583 Score = 389 bits (196), Expect = e-105 Identities = 289/320 (90%) Strand = Plus / Minus Query: 245 tcttggtactggtccatgaacgagtcgttgaacttcttgaagctcgacatgattgccggc 304 ||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 428 tcttggtactgctccatgaatgagtcgttgaacttcttgaagctcgacatgatcgccggc 369 Query: 305 atgtcctcctccgcaggcaggatcgttgtcctcagatggaacaccccttctttctgacca 364 ||||||||||| || |||||||| || |||| |||||||||||||||||||||||||| Sbjct: 368 atgtcctcctctgccggcaggatggtcgtccgaagatggaacaccccttctttctgaccg 309 Query: 365 aaacctgagcctggaacagtggatattccagtggcttccagaagcttgaggcagtagtaa 424 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| || Sbjct: 308 aaacctgagcctggaacagtggatattccggtggcttccagaagcatgaggcagtagaaa 249 Query: 425 acatcgggctctttgccagcgctttttgctacatccatagctctttgcggcaggcgtatt 484 |||||||| |||||||||||||||| ||| |||||||||||||||||| | ||||| Sbjct: 248 acatcgggtgctttgccagcgcttttggctgtatccatagctctttgcggtaaacgtatc 189 Query: 485 tgcgggaaggaatacatagctccttctgtgaaattgcagacaacattgcggcaactattg 544 || || || || ||||||||||||||||| |||||||||||||| || |||||||||||| Sbjct: 188 tggggaaacgagtacatagctccttctgtaaaattgcagacaacgtttcggcaactattg 129 Query: 545 aaaccgtctgtcattatttg 564 ||||| || ||||||||||| Sbjct: 128 aaaccatcggtcattatttg 109 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 160 aacttcaattgctggtagaaaagagcagcattatat 195 ||||| |||||||| ||||||| | ||||||||||| Sbjct: 511 aactttaattgctgctagaaaataacagcattatat 476
>gb|AY236227.1| Oryza sativa (indica cultivar-group) alanine aminotransferase mRNA, complete cds Length = 1558 Score = 335 bits (169), Expect = 9e-89 Identities = 274/309 (88%) Strand = Plus / Minus Query: 250 gtactggtccatgaacgagtcgttgaacttcttgaagctcgacatgattgccggcatgtc 309 |||||| |||||||| | ||||||||||||||||||||| | |||||| || |||||||| Sbjct: 1476 gtactgatccatgaaagtgtcgttgaacttcttgaagctggtcatgatggcaggcatgtc 1417 Query: 310 ctcctccgcaggcaggatcgttgtcctcagatggaacaccccttctttctgaccaaaacc 369 |||||| || |||||||| || |||||||| ||||||||||||||||| || || ||||| Sbjct: 1416 ctcctcagctggcaggatggtcgtcctcaggtggaacaccccttctttttgtccgaaacc 1357 Query: 370 tgagcctggaacagtggatattccagtggcttccagaagcttgaggcagtagtaaacatc 429 ||| ||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||| Sbjct: 1356 tgaccctggaacagtggatattccagttgcttcaagaagcttgaggcagtagaaaacatc 1297 Query: 430 gggctctttgccagcgctttttgctacatccatagctctttgcggcaggcgtatttgcgg 489 || | |||||||||| ||||| ||| |||| |||||| || | || | ||||||||| || Sbjct: 1296 ggccgctttgccagcccttttggctgcatctatagcttttggtggtaagcgtatttgggg 1237 Query: 490 gaaggaatacatagctccttctgtgaaattgcagacaacattgcggcaactattgaaacc 549 ||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1236 gaaagagtacatagctccttctgtgaaattgcagacaacatttcggcaactattgaaacc 1177 Query: 550 gtctgtcat 558 |||||||| Sbjct: 1176 atctgtcat 1168
>dbj|AK067732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118J02, full insert sequence Length = 1970 Score = 335 bits (169), Expect = 9e-89 Identities = 274/309 (88%) Strand = Plus / Minus Query: 250 gtactggtccatgaacgagtcgttgaacttcttgaagctcgacatgattgccggcatgtc 309 |||||| |||||||| | ||||||||||||||||||||| | |||||| || |||||||| Sbjct: 1525 gtactgatccatgaaagtgtcgttgaacttcttgaagctggtcatgatggcaggcatgtc 1466 Query: 310 ctcctccgcaggcaggatcgttgtcctcagatggaacaccccttctttctgaccaaaacc 369 |||||| || |||||||| || |||||||| ||||||||||||||||| || || ||||| Sbjct: 1465 ctcctcagctggcaggatggtcgtcctcaggtggaacaccccttctttttgtccgaaacc 1406 Query: 370 tgagcctggaacagtggatattccagtggcttccagaagcttgaggcagtagtaaacatc 429 ||| ||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||| Sbjct: 1405 tgaccctggaacagtggatattccagttgcttcaagaagcttgaggcagtagaaaacatc 1346 Query: 430 gggctctttgccagcgctttttgctacatccatagctctttgcggcaggcgtatttgcgg 489 || | |||||||||| ||||| ||| |||| |||||| || | || | ||||||||| || Sbjct: 1345 ggccgctttgccagcccttttggctgcatctatagcttttggtggtaagcgtatttgggg 1286 Query: 490 gaaggaatacatagctccttctgtgaaattgcagacaacattgcggcaactattgaaacc 549 ||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1285 gaaagagtacatagctccttctgtgaaattgcagacaacatttcggcaactattgaaacc 1226 Query: 550 gtctgtcat 558 |||||||| Sbjct: 1225 atctgtcat 1217
>dbj|AK060835.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-C09, full insert sequence Length = 1581 Score = 335 bits (169), Expect = 9e-89 Identities = 274/309 (88%) Strand = Plus / Minus Query: 250 gtactggtccatgaacgagtcgttgaacttcttgaagctcgacatgattgccggcatgtc 309 |||||| |||||||| | ||||||||||||||||||||| | |||||| || |||||||| Sbjct: 1294 gtactgatccatgaaagtgtcgttgaacttcttgaagctggtcatgatggcaggcatgtc 1235 Query: 310 ctcctccgcaggcaggatcgttgtcctcagatggaacaccccttctttctgaccaaaacc 369 |||||| || |||||||| || |||||||| ||||||||||||||||| || || ||||| Sbjct: 1234 ctcctcagctggcaggatggtcgtcctcaggtggaacaccccttctttttgtccgaaacc 1175 Query: 370 tgagcctggaacagtggatattccagtggcttccagaagcttgaggcagtagtaaacatc 429 ||| ||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||| Sbjct: 1174 tgaccctggaacagtggatattccagttgcttcaagaagcttgaggcagtagaaaacatc 1115 Query: 430 gggctctttgccagcgctttttgctacatccatagctctttgcggcaggcgtatttgcgg 489 || | |||||||||| ||||| ||| |||| |||||| || | || | ||||||||| || Sbjct: 1114 ggccgctttgccagcccttttggctgcatctatagcttttggtggtaagcgtatttgggg 1055 Query: 490 gaaggaatacatagctccttctgtgaaattgcagacaacattgcggcaactattgaaacc 549 ||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1054 gaaagagtacatagctccttctgtgaaattgcagacaacatttcggcaactattgaaacc 995 Query: 550 gtctgtcat 558 |||||||| Sbjct: 994 atctgtcat 986
>gb|AY108756.1| Zea mays PCO087866 mRNA sequence Length = 1198 Score = 194 bits (98), Expect = 2e-46 Identities = 272/330 (82%) Strand = Plus / Minus Query: 229 tcacagcctcgagtggtcttggtactggtccatgaacgagtcgttgaacttcttgaagct 288 ||||||||| |||| | | | |||||| |||||||||||||||||||||||||||||||| Sbjct: 896 tcacagcctggagtagccctcgtactgttccatgaacgagtcgttgaacttcttgaagct 837 Query: 289 cgacatgattgccggcatgtcctcctccgcaggcaggatcgttgtcctcagatggaacac 348 ||||||||| || || | ||| |||||||| || ||||| || |||| || |||||||| Sbjct: 836 cgacatgatggcagggaagtcttcctccgctggaaggatagtggtccgaaggtggaacac 777 Query: 349 cccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaag 408 |||||| || || |||||||| ||||| || |||||||| ||||| || || ||||| || Sbjct: 776 cccttccttttgcccaaaaccagagcccgggacagtggagattcctgtcgcctccaggag 717 Query: 409 cttgaggcagtagtaaacatcgggctctttgccagcgctttttgctacatccatagctct 468 ||||||||||||| | || || | |||||| || ||| |||| | || |||||||| Sbjct: 716 cttgaggcagtagaagacgtccgctgatttgccggctcttcttgccgcctcaatagctct 657 Query: 469 ttgcggcaggcgtatttgcgggaaggaatacatagctccttctgtgaaattgcagacaac 528 | ||||| |||||||| ||||| || |||||||||||||| ||||||||||| || || Sbjct: 656 cggtggcagacgtatttgggggaaagagtacatagctccttcagtgaaattgcacacgac 597 Query: 529 attgcggcaactattgaaaccgtctgtcat 558 || |||||||| |||||||| |||||||| Sbjct: 596 gtttcggcaactgttgaaaccatctgtcat 567
>gb|AY109741.1| Zea mays CL1839_2 mRNA sequence Length = 1303 Score = 180 bits (91), Expect = 3e-42 Identities = 249/302 (82%) Strand = Plus / Plus Query: 257 tccatgaacgagtcgttgaacttcttgaagctcgacatgattgccggcatgtcctcctcc 316 |||||||| |||||||||||||||||||||||||||||||| | || | ||| ||||| Sbjct: 199 tccatgaatgagtcgttgaacttcttgaagctcgacatgatggtagggaagtcttcctcg 258 Query: 317 gcaggcaggatcgttgtcctcagatggaacaccccttctttctgaccaaaacctgagcct 376 || || ||||| ||||||| || |||||||||||||| ||||| |||||||| || || Sbjct: 259 gctggaaggatagttgtccgaaggtggaacaccccttccttctgcccaaaaccagatccc 318 Query: 377 ggaacagtggatattccagtggcttccagaagcttgaggcagtagtaaacatcgggctct 436 ||||||||||| || || || || ||||| ||||||||||||||| |||| || | || Sbjct: 319 ggaacagtggaaatccccgttgcctccaggagcttgaggcagtagaaaacgtctgctgct 378 Query: 437 ttgccagcgctttttgctacatccatagctctttgcggcaggcgtatttgcgggaaggaa 496 ||||| || || ||||| | || || |||||| ||||| ||||||| |||| || Sbjct: 379 ttgccggctctctttgccgcctcgatggctcttgctggcagctgtatttggnggaaagag 438 Query: 497 tacatagctccttctgtgaaattgcagacaacattgcggcaactattgaaaccgtctgtc 556 |||||||||||||||||||||||||| || ||||| ||||| || ||||||||||||||| Sbjct: 439 tacatagctccttctgtgaaattgcacaccacatttcggcagctgttgaaaccgtctgtc 498 Query: 557 at 558 || Sbjct: 499 at 500
>gb|DQ118094.1| Vitis labrusca AlaT1 mRNA, complete cds Length = 1434 Score = 153 bits (77), Expect = 7e-34 Identities = 242/297 (81%) Strand = Plus / Minus Query: 272 ttgaacttcttgaagctcgacatgattgccggcatgtcctcctccgcaggcaggatcgtt 331 |||||||||||||| || ||| ||||| |||||||| ||||| || |||| ||| ||| Sbjct: 1394 ttgaacttcttgaaactttccataattgcaggcatgtcttcctcagctggcaagatggtt 1335 Query: 332 gtcctcagatggaacaccccttctttctgaccaaaacctgagcctggaacagtggatatt 391 ||||| | ||||| |||||||||||||| ||||| ||||| || || |||||||| ||| Sbjct: 1334 gtccttaagtggaagaccccttctttctgtccaaatcctgaaccagggacagtggaaatt 1275 Query: 392 ccagtggcttccagaagcttgaggcagtagtaaacatcgggctctttgccagcgcttttt 451 ||||||||||||| ||||||||||||||| ||||||| | |||| ||||| |||| Sbjct: 1274 ccagtggcttccaagagcttgaggcagtagaaaacatcagcgactttaccagcctttttg 1215 Query: 452 gctacatccatagctctttgcggcaggcgtatttgcgggaaggaatacatagctccttct 511 || | || |||||| || | |||| |||||||| ||||| || ||||| || |||||| Sbjct: 1214 gcagcctcaatagcttttggtggcaatcgtatttgagggaatgagtacatggccccttct 1155 Query: 512 gtgaaattgcagacaacattgcggcaactattgaaaccgtctgtcattatttgtgcc 568 |||||||| || || ||||| | |||||||||||| || || |||||||| |||||| Sbjct: 1154 gtgaaattacaaactacatttctgcaactattgaatccatcagtcattatctgtgcc 1098
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 151 bits (76), Expect = 3e-33 Identities = 139/160 (86%) Strand = Plus / Plus Query: 349 cccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaag 408 ||||||||| || || |||||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 446025 cccttctttttgtccgaaacctgaccctggaacagtggatattccagttgcttcaagaag 446084 Query: 409 cttgaggcagtagtaaacatcgggctctttgccagcgctttttgctacatccatagctct 468 ||||||||||||| ||||||||| | |||||||||| ||||| ||| |||| |||||| | Sbjct: 446085 cttgaggcagtagaaaacatcggccgctttgccagcccttttggctgcatctatagcttt 446144 Query: 469 ttgcggcaggcgtatttgcgggaaggaatacatagctcct 508 | | || | ||||||||| ||||| || |||||||||||| Sbjct: 446145 tggtggtaagcgtatttgggggaaagagtacatagctcct 446184 Score = 105 bits (53), Expect = 2e-19 Identities = 89/101 (88%) Strand = Plus / Plus Query: 250 gtactggtccatgaacgagtcgttgaacttcttgaagctcgacatgattgccggcatgtc 309 |||||| |||||||| | ||||||||||||||||||||| | |||||| || |||||||| Sbjct: 445640 gtactgatccatgaaagtgtcgttgaacttcttgaagctggtcatgatggcaggcatgtc 445699 Query: 310 ctcctccgcaggcaggatcgttgtcctcagatggaacaccc 350 |||||| || |||||||| || |||||||| |||||||||| Sbjct: 445700 ctcctcagctggcaggatggtcgtcctcaggtggaacaccc 445740 Score = 89.7 bits (45), Expect = 9e-15 Identities = 51/53 (96%) Strand = Plus / Plus Query: 506 ccttctgtgaaattgcagacaacattgcggcaactattgaaaccgtctgtcat 558 |||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 446273 ccttctgtgaaattgcagacaacatttcggcaactattgaaaccatctgtcat 446325
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 151 bits (76), Expect = 3e-33 Identities = 139/160 (86%) Strand = Plus / Plus Query: 349 cccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaag 408 ||||||||| || || |||||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 48189 cccttctttttgtccgaaacctgaccctggaacagtggatattccagttgcttcaagaag 48248 Query: 409 cttgaggcagtagtaaacatcgggctctttgccagcgctttttgctacatccatagctct 468 ||||||||||||| ||||||||| | |||||||||| ||||| ||| |||| |||||| | Sbjct: 48249 cttgaggcagtagaaaacatcggccgctttgccagcccttttggctgcatctatagcttt 48308 Query: 469 ttgcggcaggcgtatttgcgggaaggaatacatagctcct 508 | | || | ||||||||| ||||| || |||||||||||| Sbjct: 48309 tggtggtaagcgtatttgggggaaagagtacatagctcct 48348 Score = 105 bits (53), Expect = 2e-19 Identities = 89/101 (88%) Strand = Plus / Plus Query: 250 gtactggtccatgaacgagtcgttgaacttcttgaagctcgacatgattgccggcatgtc 309 |||||| |||||||| | ||||||||||||||||||||| | |||||| || |||||||| Sbjct: 47804 gtactgatccatgaaagtgtcgttgaacttcttgaagctggtcatgatggcaggcatgtc 47863 Query: 310 ctcctccgcaggcaggatcgttgtcctcagatggaacaccc 350 |||||| || |||||||| || |||||||| |||||||||| Sbjct: 47864 ctcctcagctggcaggatggtcgtcctcaggtggaacaccc 47904 Score = 89.7 bits (45), Expect = 9e-15 Identities = 51/53 (96%) Strand = Plus / Plus Query: 506 ccttctgtgaaattgcagacaacattgcggcaactattgaaaccgtctgtcat 558 |||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 48437 ccttctgtgaaattgcagacaacatttcggcaactattgaaaccatctgtcat 48489
>gb|DQ118095.1| Vitis vinifera AlaT1 mRNA, complete cds Length = 1455 Score = 129 bits (65), Expect = 1e-26 Identities = 239/297 (80%) Strand = Plus / Minus Query: 272 ttgaacttcttgaagctcgacatgattgccggcatgtcctcctccgcaggcaggatcgtt 331 |||||||||||||| || ||| ||||| ||||| || ||||| || |||| ||| ||| Sbjct: 1394 ttgaacttcttgaaactttccataattgcaggcatctcttcctcagctggcaagatggtt 1335 Query: 332 gtcctcagatggaacaccccttctttctgaccaaaacctgagcctggaacagtggatatt 391 || || | ||||| |||||||||||||| ||||| ||||| || || |||||||| ||| Sbjct: 1334 gttcttaagtggaagaccccttctttctgtccaaatcctgaaccagggacagtggaaatt 1275 Query: 392 ccagtggcttccagaagcttgaggcagtagtaaacatcgggctctttgccagcgcttttt 451 ||||||||||||| ||||||||||||||| ||||||| | |||| ||||| |||| Sbjct: 1274 ccagtggcttccaagagcttgaggcagtagaaaacatcagcgactttaccagcctttttg 1215 Query: 452 gctacatccatagctctttgcggcaggcgtatttgcgggaaggaatacatagctccttct 511 || | || |||||| || | |||| |||||||| ||||| || ||||| || |||||| Sbjct: 1214 gcagcctcaatagcttttggtggcaatcgtatttgagggaatgagtacatggccccttct 1155 Query: 512 gtgaaattgcagacaacattgcggcaactattgaaaccgtctgtcattatttgtgcc 568 |||||||| || || ||||| | |||||| ||||| || || |||||||| |||||| Sbjct: 1154 gtgaaattacaaactacatttctgcaactgttgaatccatcagtcattatctgtgcc 1098
>ref|NM_102180.2| Arabidopsis thaliana GGT1 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 1) AT1G23310 (GGT1) transcript variant AT1G23310.1 mRNA, complete cds Length = 2052 Score = 123 bits (62), Expect = 7e-25 Identities = 155/186 (83%) Strand = Plus / Minus Query: 259 catgaacgagtcgttgaacttcttgaagctcgacatgattgccggcatgtcctcctccgc 318 ||||||| ||||||||||||||||||||| |||||| ||||||| || || || || Sbjct: 1709 catgaactcgtcgttgaacttcttgaagctatccatgatctccggcatctcatcttctgc 1650 Query: 319 aggcaggatcgttgtcctcagatggaacaccccttctttctgaccaaaacctgagcctgg 378 |||||||| |||||||||||||||||||| ||||||||||| ||||| || ||||| || Sbjct: 1649 tggcaggattgttgtcctcagatggaacacaccttctttctgtccaaatccagagccagg 1590 Query: 379 aacagtggatattccagtggcttccagaagcttgaggcagtagtaaacatcgggctcttt 438 || ||||| ||||| |||||||| | |||||||| |||||| |||| || ||| |||| Sbjct: 1589 tactgtggagattcctgtggcttctaagagcttgagacagtagaaaacgtctggcacttt 1530 Query: 439 gccagc 444 ||||| Sbjct: 1529 tccagc 1524 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 479 cgtatttgcgggaaggaatacatagctccttctgtgaaattgca 522 |||||||| || || |||||||| || ||||||||||||||||| Sbjct: 1489 cgtatttgaggaaacgaatacattgcaccttctgtgaaattgca 1446
>gb|AY150373.1| Arabidopsis thaliana putative alanine aminotransferase (At1g23310) mRNA, complete cds Length = 1477 Score = 123 bits (62), Expect = 7e-25 Identities = 155/186 (83%) Strand = Plus / Minus Query: 259 catgaacgagtcgttgaacttcttgaagctcgacatgattgccggcatgtcctcctccgc 318 ||||||| ||||||||||||||||||||| |||||| ||||||| || || || || Sbjct: 1407 catgaactcgtcgttgaacttcttgaagctatccatgatctccggcatctcatcttctgc 1348 Query: 319 aggcaggatcgttgtcctcagatggaacaccccttctttctgaccaaaacctgagcctgg 378 |||||||| |||||||||||||||||||| ||||||||||| ||||| || ||||| || Sbjct: 1347 tggcaggattgttgtcctcagatggaacacaccttctttctgtccaaatccagagccagg 1288 Query: 379 aacagtggatattccagtggcttccagaagcttgaggcagtagtaaacatcgggctcttt 438 || ||||| ||||| |||||||| | |||||||| |||||| |||| || ||| |||| Sbjct: 1287 tactgtggagattcctgtggcttctaagagcttgagacagtagaaaacgtctggcacttt 1228 Query: 439 gccagc 444 ||||| Sbjct: 1227 tccagc 1222 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 479 cgtatttgcgggaaggaatacatagctccttctgtgaaattgca 522 |||||||| || || |||||||| || ||||||||||||||||| Sbjct: 1187 cgtatttgaggaaacgaatacattgcaccttctgtgaaattgca 1144
>gb|AF360195.1| Arabidopsis thaliana putative alanine aminotransferase (At1g23310) mRNA, complete cds Length = 1768 Score = 123 bits (62), Expect = 7e-25 Identities = 155/186 (83%) Strand = Plus / Minus Query: 259 catgaacgagtcgttgaacttcttgaagctcgacatgattgccggcatgtcctcctccgc 318 ||||||| ||||||||||||||||||||| |||||| ||||||| || || || || Sbjct: 1531 catgaactcgtcgttgaacttcttgaagctatccatgatctccggcatctcatcttctgc 1472 Query: 319 aggcaggatcgttgtcctcagatggaacaccccttctttctgaccaaaacctgagcctgg 378 |||||||| |||||||||||||||||||| ||||||||||| ||||| || ||||| || Sbjct: 1471 tggcaggattgttgtcctcagatggaacacaccttctttctgtccaaatccagagccagg 1412 Query: 379 aacagtggatattccagtggcttccagaagcttgaggcagtagtaaacatcgggctcttt 438 || ||||| ||||| |||||||| | |||||||| |||||| |||| || ||| |||| Sbjct: 1411 tactgtggagattcctgtggcttctaagagcttgagacagtagaaaacgtctggcacttt 1352 Query: 439 gccagc 444 ||||| Sbjct: 1351 tccagc 1346 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Minus Query: 479 cgtatttgcgggaaggaatacatagctccttctgtgaaattgc 521 |||||||| || || |||||||| || |||||||||||||||| Sbjct: 1311 cgtatttgaggaaacgaatacattgcaccttctgtgaaattgc 1269
>gb|AY058868.1| Arabidopsis thaliana At1g23310/F26F24_4 mRNA, complete cds Length = 1762 Score = 123 bits (62), Expect = 7e-25 Identities = 155/186 (83%) Strand = Plus / Minus Query: 259 catgaacgagtcgttgaacttcttgaagctcgacatgattgccggcatgtcctcctccgc 318 ||||||| ||||||||||||||||||||| |||||| ||||||| || || || || Sbjct: 1513 catgaactcgtcgttgaacttcttgaagctatccatgatctccggcatctcatcttctgc 1454 Query: 319 aggcaggatcgttgtcctcagatggaacaccccttctttctgaccaaaacctgagcctgg 378 |||||||| |||||||||||||||||||| ||||||||||| ||||| || ||||| || Sbjct: 1453 tggcaggattgttgtcctcagatggaacacaccttctttctgtccaaatccagagccagg 1394 Query: 379 aacagtggatattccagtggcttccagaagcttgaggcagtagtaaacatcgggctcttt 438 || ||||| ||||| |||||||| | |||||||| |||||| |||| || ||| |||| Sbjct: 1393 tactgtggagattcctgtggcttctaagagcttgagacagtagaaaacgtctggcacttt 1334 Query: 439 gccagc 444 ||||| Sbjct: 1333 tccagc 1328 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 479 cgtatttgcgggaaggaatacatagctccttctgtgaaattgca 522 |||||||| || || |||||||| || ||||||||||||||||| Sbjct: 1293 cgtatttgaggaaacgaatacattgcaccttctgtgaaattgca 1250
>gb|AY056379.1| Arabidopsis thaliana At1g23310/F26F24_4 mRNA, complete cds Length = 1647 Score = 123 bits (62), Expect = 7e-25 Identities = 155/186 (83%) Strand = Plus / Minus Query: 259 catgaacgagtcgttgaacttcttgaagctcgacatgattgccggcatgtcctcctccgc 318 ||||||| ||||||||||||||||||||| |||||| ||||||| || || || || Sbjct: 1513 catgaactcgtcgttgaacttcttgaagctatccatgatctccggcatctcatcttctgc 1454 Query: 319 aggcaggatcgttgtcctcagatggaacaccccttctttctgaccaaaacctgagcctgg 378 |||||||| |||||||||||||||||||| ||||||||||| ||||| || ||||| || Sbjct: 1453 tggcaggattgttgtcctcagatggaacacaccttctttctgtccaaatccagagccagg 1394 Query: 379 aacagtggatattccagtggcttccagaagcttgaggcagtagtaaacatcgggctcttt 438 || ||||| ||||| |||||||| | |||||||| |||||| |||| || ||| |||| Sbjct: 1393 tactgtggagattcctgtggcttctaagagcttgagacagtagaaaacgtctggcacttt 1334 Query: 439 gccagc 444 ||||| Sbjct: 1333 tccagc 1328 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 479 cgtatttgcgggaaggaatacatagctccttctgtgaaattgca 522 |||||||| || || |||||||| || ||||||||||||||||| Sbjct: 1293 cgtatttgaggaaacgaatacattgcaccttctgtgaaattgca 1250
>gb|AY042902.1| Arabidopsis thaliana alanine aminotransferase-like protein (F26F24.16) mRNA, partial cds Length = 1328 Score = 123 bits (62), Expect = 7e-25 Identities = 155/186 (83%) Strand = Plus / Minus Query: 259 catgaacgagtcgttgaacttcttgaagctcgacatgattgccggcatgtcctcctccgc 318 ||||||| ||||||||||||||||||||| |||||| ||||||| || || || || Sbjct: 1102 catgaactcgtcgttgaacttcttgaagctatccatgatctccggcatctcatcttctgc 1043 Query: 319 aggcaggatcgttgtcctcagatggaacaccccttctttctgaccaaaacctgagcctgg 378 |||||||| |||||||||||||||||||| ||||||||||| ||||| || ||||| || Sbjct: 1042 tggcaggattgttgtcctcagatggaacacaccttctttctgtccaaatccagagccagg 983 Query: 379 aacagtggatattccagtggcttccagaagcttgaggcagtagtaaacatcgggctcttt 438 || ||||| ||||| |||||||| | |||||||| |||||| |||| || ||| |||| Sbjct: 982 tactgtggagattcctgtggcttctaagagcttgagacagtagaaaacgtctggcacttt 923 Query: 439 gccagc 444 ||||| Sbjct: 922 tccagc 917 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 479 cgtatttgcgggaaggaatacatagctccttctgtgaaattgca 522 |||||||| || || |||||||| || ||||||||||||||||| Sbjct: 882 cgtatttgaggaaacgaatacattgcaccttctgtgaaattgca 839
>emb|BX816016.1|CNS0AD1E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH23ZA06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 617 Score = 123 bits (62), Expect = 7e-25 Identities = 155/186 (83%) Strand = Plus / Minus Query: 259 catgaacgagtcgttgaacttcttgaagctcgacatgattgccggcatgtcctcctccgc 318 ||||||| ||||||||||||||||||||| |||||| ||||||| || || || || Sbjct: 472 catgaactcgtcgttgaacttcttgaagctatccatgatctccggcatctcatcttctgc 413 Query: 319 aggcaggatcgttgtcctcagatggaacaccccttctttctgaccaaaacctgagcctgg 378 |||||||| |||||||||||||||||||| ||||||||||| ||||| || ||||| || Sbjct: 412 tggcaggattgttgtcctcagatggaacacaccttctttctgtccaaatccagagccagg 353 Query: 379 aacagtggatattccagtggcttccagaagcttgaggcagtagtaaacatcgggctcttt 438 || ||||| ||||| |||||||| | |||||||| |||||| |||| || ||| |||| Sbjct: 352 tactgtggagattcctgtggcttctaagagcttgagacagtagaaaacgtctggcacttt 293 Query: 439 gccagc 444 ||||| Sbjct: 292 tccagc 287 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 479 cgtatttgcgggaaggaatacatagctccttctgtgaaattgca 522 |||||||| || || |||||||| || ||||||||||||||||| Sbjct: 252 cgtatttgaggaaacgaatacattgcaccttctgtgaaattgca 209
>gb|AF479639.1| Arabidopsis thaliana glutamate:glyoxylate aminotransferase 1 (GGT1) mRNA, complete cds Length = 1714 Score = 123 bits (62), Expect = 7e-25 Identities = 155/186 (83%) Strand = Plus / Minus Query: 259 catgaacgagtcgttgaacttcttgaagctcgacatgattgccggcatgtcctcctccgc 318 ||||||| ||||||||||||||||||||| |||||| ||||||| || || || || Sbjct: 1554 catgaactcgtcgttgaacttcttgaagctatccatgatctccggcatctcatcttctgc 1495 Query: 319 aggcaggatcgttgtcctcagatggaacaccccttctttctgaccaaaacctgagcctgg 378 |||||||| |||||||||||||||||||| ||||||||||| ||||| || ||||| || Sbjct: 1494 tggcaggattgttgtcctcagatggaacacaccttctttctgtccaaatccagagccagg 1435 Query: 379 aacagtggatattccagtggcttccagaagcttgaggcagtagtaaacatcgggctcttt 438 || ||||| ||||| |||||||| | |||||||| |||||| |||| || ||| |||| Sbjct: 1434 tactgtggagattcctgtggcttctaagagcttgagacagtagaaaacgtctggcacttt 1375 Query: 439 gccagc 444 ||||| Sbjct: 1374 tccagc 1369 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 479 cgtatttgcgggaaggaatacatagctccttctgtgaaattgca 522 |||||||| || || |||||||| || ||||||||||||||||| Sbjct: 1334 cgtatttgaggaaacgaatacattgcaccttctgtgaaattgca 1291
>gb|BT002643.1| Arabidopsis thaliana At1g23310/F26F24_4 gene, complete cds Length = 1446 Score = 123 bits (62), Expect = 7e-25 Identities = 155/186 (83%) Strand = Plus / Minus Query: 259 catgaacgagtcgttgaacttcttgaagctcgacatgattgccggcatgtcctcctccgc 318 ||||||| ||||||||||||||||||||| |||||| ||||||| || || || || Sbjct: 1407 catgaactcgtcgttgaacttcttgaagctatccatgatctccggcatctcatcttctgc 1348 Query: 319 aggcaggatcgttgtcctcagatggaacaccccttctttctgaccaaaacctgagcctgg 378 |||||||| |||||||||||||||||||| ||||||||||| ||||| || ||||| || Sbjct: 1347 tggcaggattgttgtcctcagatggaacacaccttctttctgtccaaatccagagccagg 1288 Query: 379 aacagtggatattccagtggcttccagaagcttgaggcagtagtaaacatcgggctcttt 438 || ||||| ||||| |||||||| | |||||||| |||||| |||| || ||| |||| Sbjct: 1287 tactgtggagattcctgtggcttctaagagcttgagacagtagaaaacgtctggcacttt 1228 Query: 439 gccagc 444 ||||| Sbjct: 1227 tccagc 1222 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 479 cgtatttgcgggaaggaatacatagctccttctgtgaaattgca 522 |||||||| || || |||||||| || ||||||||||||||||| Sbjct: 1187 cgtatttgaggaaacgaatacattgcaccttctgtgaaattgca 1144
>emb|BX814587.1|CNS0AAUD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB82ZG03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1707 Score = 115 bits (58), Expect = 2e-22 Identities = 136/162 (83%) Strand = Plus / Minus Query: 259 catgaacgagtcgttgaacttcttgaagctcgacatgattgccggcatgtcctcctccgc 318 ||||||| ||||||||||||||||||||| |||||| ||||||| || || || || Sbjct: 1496 catgaactcgtcgttgaacttcttgaagctatccatgatctccggcatctcatcttctgc 1437 Query: 319 aggcaggatcgttgtcctcagatggaacaccccttctttctgaccaaaacctgagcctgg 378 |||||||| |||||||||||||||||||| ||||||||||| ||||| || ||||| || Sbjct: 1436 tggcaggattgttgtcctcagatggaacacaccttctttctgtccaaatccagagccagg 1377 Query: 379 aacagtggatattccagtggcttccagaagcttgaggcagta 420 || ||||| ||||| |||||||| | |||||||| ||||| Sbjct: 1376 tactgtggagattcctgtggcttctaagagcttgagacagta 1335 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 479 cgtatttgcgggaaggaatacatagctccttctgtgaaattgca 522 |||||||| || || |||||||| || ||||||||||||||||| Sbjct: 1276 cgtatttgaggaaacgaatacattgcaccttctgtgaaattgca 1233
>dbj|AP004918.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT13I21, TM0076a, complete sequence Length = 71794 Score = 105 bits (53), Expect = 2e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 353 tctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaagcttg 412 |||||||| ||||| |||||||| |||||||||||||| ||||||||||||| ||||||| Sbjct: 32352 tctttctgtccaaatcctgagccaggaacagtggatatgccagtggcttccaaaagcttg 32411 Query: 413 aggcagtagtaaacatc 429 || |||||||||||||| Sbjct: 32412 agacagtagtaaacatc 32428
>gb|AC126783.33| Medicago truncatula clone mth2-15k17, complete sequence Length = 117437 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 349 cccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaag 408 |||||||||||| ||||| ||||| || || ||||||||||| ||||||||||||| ||| Sbjct: 77569 cccttctttctgtccaaatcctgaaccagggacagtggatatgccagtggcttccaaaag 77628 Query: 409 cttgaggcagtagtaaacatc 429 |||||| |||||||||||||| Sbjct: 77629 cttgagacagtagtaaacatc 77649
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 89.7 bits (45), Expect = 9e-15 Identities = 51/53 (96%) Strand = Plus / Plus Query: 506 ccttctgtgaaattgcagacaacattgcggcaactattgaaaccgtctgtcat 558 |||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 185 ccttctgtgaaattgcagacaacatttcggcaactattgaaaccatctgtcat 237 Score = 71.9 bits (36), Expect = 2e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 413 aggcagtagtaaacatcgggctctttgccagcgctttttgctacatccatagctctttgc 472 ||||||||| ||||||||| | |||||||||| ||||| ||| |||| |||||| || | Sbjct: 1 aggcagtagaaaacatcggccgctttgccagcccttttggctgcatctatagcttttggt 60 Query: 473 ggcaggcgtatttgcgggaaggaatacatagctcct 508 || | ||||||||| ||||| || |||||||||||| Sbjct: 61 ggtaagcgtatttgggggaaagagtacatagctcct 96
>ref|NM_001036185.1| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); alanine transaminase AT1G70580 (AOAT2) transcript variant AT1G70580.3 mRNA, complete cds Length = 1817 Score = 77.8 bits (39), Expect = 4e-11 Identities = 90/107 (84%) Strand = Plus / Minus Query: 320 ggcaggatcgttgtcctcagatggaacaccccttctttctgaccaaaacctgagcctgga 379 ||||| || |||||||| | ||| |||||||||||||| || ||||| || ||||||||| Sbjct: 1493 ggcagaattgttgtccttaaatgaaacaccccttctttttgtccaaatccagagcctgga 1434 Query: 380 acagtggatattccagtggcttccagaagcttgaggcagtagtaaac 426 || ||||| ||||| |||||||| | ||||| ||||||||| |||| Sbjct: 1433 actgtggagattcctgtggcttctaagagcttaaggcagtagaaaac 1387 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 481 tatttgcgggaaggaatacatagctccttctgtgaaattgcagac 525 |||||| ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 1332 tatttgagggaatgaatacatagcaccttctgtgaaattacagac 1288
>ref|NM_001036186.1| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); alanine transaminase AT1G70580 (AOAT2) transcript variant AT1G70580.4 mRNA, complete cds Length = 1835 Score = 77.8 bits (39), Expect = 4e-11 Identities = 90/107 (84%) Strand = Plus / Minus Query: 320 ggcaggatcgttgtcctcagatggaacaccccttctttctgaccaaaacctgagcctgga 379 ||||| || |||||||| | ||| |||||||||||||| || ||||| || ||||||||| Sbjct: 1511 ggcagaattgttgtccttaaatgaaacaccccttctttttgtccaaatccagagcctgga 1452 Query: 380 acagtggatattccagtggcttccagaagcttgaggcagtagtaaac 426 || ||||| ||||| |||||||| | ||||| ||||||||| |||| Sbjct: 1451 actgtggagattcctgtggcttctaagagcttaaggcagtagaaaac 1405 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 481 tatttgcgggaaggaatacatagctccttctgtgaaattgcagac 525 |||||| ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 1350 tatttgagggaatgaatacatagcaccttctgtgaaattacagac 1306
>ref|NM_105726.2| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); alanine transaminase AT1G70580 (AOAT2) transcript variant AT1G70580.1 mRNA, complete cds Length = 1795 Score = 77.8 bits (39), Expect = 4e-11 Identities = 90/107 (84%) Strand = Plus / Minus Query: 320 ggcaggatcgttgtcctcagatggaacaccccttctttctgaccaaaacctgagcctgga 379 ||||| || |||||||| | ||| |||||||||||||| || ||||| || ||||||||| Sbjct: 1471 ggcagaattgttgtccttaaatgaaacaccccttctttttgtccaaatccagagcctgga 1412 Query: 380 acagtggatattccagtggcttccagaagcttgaggcagtagtaaac 426 || ||||| ||||| |||||||| | ||||| ||||||||| |||| Sbjct: 1411 actgtggagattcctgtggcttctaagagcttaaggcagtagaaaac 1365 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 481 tatttgcgggaaggaatacatagctccttctgtgaaattgcagac 525 |||||| ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 1310 tatttgagggaatgaatacatagcaccttctgtgaaattacagac 1266
>ref|NM_202393.1| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); alanine transaminase AT1G70580 (AOAT2) transcript variant AT1G70580.2 mRNA, complete cds Length = 1851 Score = 77.8 bits (39), Expect = 4e-11 Identities = 90/107 (84%) Strand = Plus / Minus Query: 320 ggcaggatcgttgtcctcagatggaacaccccttctttctgaccaaaacctgagcctgga 379 ||||| || |||||||| | ||| |||||||||||||| || ||||| || ||||||||| Sbjct: 1527 ggcagaattgttgtccttaaatgaaacaccccttctttttgtccaaatccagagcctgga 1468 Query: 380 acagtggatattccagtggcttccagaagcttgaggcagtagtaaac 426 || ||||| ||||| |||||||| | ||||| ||||||||| |||| Sbjct: 1467 actgtggagattcctgtggcttctaagagcttaaggcagtagaaaac 1421 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 481 tatttgcgggaaggaatacatagctccttctgtgaaattgcagac 525 |||||| ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 1366 tatttgagggaatgaatacatagcaccttctgtgaaattacagac 1322
>gb|AY062982.1| Arabidopsis thaliana putative alanine aminotransferase (At1g70580) mRNA, complete cds Length = 1477 Score = 77.8 bits (39), Expect = 4e-11 Identities = 90/107 (84%) Strand = Plus / Minus Query: 320 ggcaggatcgttgtcctcagatggaacaccccttctttctgaccaaaacctgagcctgga 379 ||||| || |||||||| | ||| |||||||||||||| || ||||| || ||||||||| Sbjct: 1346 ggcagaattgttgtccttaaatgaaacaccccttctttttgtccaaatccagagcctgga 1287 Query: 380 acagtggatattccagtggcttccagaagcttgaggcagtagtaaac 426 || ||||| ||||| |||||||| | ||||| ||||||||| |||| Sbjct: 1286 actgtggagattcctgtggcttctaagagcttaaggcagtagaaaac 1240 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 481 tatttgcgggaaggaatacatagctccttctgtgaaattgcagac 525 |||||| ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 1185 tatttgagggaatgaatacatagcaccttctgtgaaattacagac 1141
>gb|AY035130.1| Arabidopsis thaliana putative alanine aminotransferase (At1g70580) mRNA, complete cds Length = 1773 Score = 77.8 bits (39), Expect = 4e-11 Identities = 90/107 (84%) Strand = Plus / Minus Query: 320 ggcaggatcgttgtcctcagatggaacaccccttctttctgaccaaaacctgagcctgga 379 ||||| || |||||||| | ||| |||||||||||||| || ||||| || ||||||||| Sbjct: 1471 ggcagaattgttgtccttaaatgaaacaccccttctttttgtccaaatccagagcctgga 1412 Query: 380 acagtggatattccagtggcttccagaagcttgaggcagtagtaaac 426 || ||||| ||||| |||||||| | ||||| ||||||||| |||| Sbjct: 1411 actgtggagattcctgtggcttctaagagcttaaggcagtagaaaac 1365 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 481 tatttgcgggaaggaatacatagctccttctgtgaaattgcagac 525 |||||| ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 1310 tatttgagggaatgaatacatagcaccttctgtgaaattacagac 1266
>gb|AF479640.1| Arabidopsis thaliana glutamate:glyoxylate aminotransferase 2 (GGT2) mRNA, complete cds Length = 1582 Score = 77.8 bits (39), Expect = 4e-11 Identities = 90/107 (84%) Strand = Plus / Minus Query: 320 ggcaggatcgttgtcctcagatggaacaccccttctttctgaccaaaacctgagcctgga 379 ||||| || |||||||| | ||| |||||||||||||| || ||||| || ||||||||| Sbjct: 1365 ggcagaattgttgtccttaaatgaaacaccccttctttttgtccaaatccagagcctgga 1306 Query: 380 acagtggatattccagtggcttccagaagcttgaggcagtagtaaac 426 || ||||| ||||| |||||||| | ||||| ||||||||| |||| Sbjct: 1305 actgtggagattcctgtggcttctaagagcttaaggcagtagaaaac 1259 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 481 tatttgcgggaaggaatacatagctccttctgtgaaattgcagac 525 |||||| ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 1204 tatttgagggaatgaatacatagcaccttctgtgaaattacagac 1160
>gb|AC005292.4|AC005292 Genomic sequence for Arabidopsis thaliana BAC F26F24 from chromosome I, complete sequence Length = 99053 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 259 catgaacgagtcgttgaacttcttgaagctcgacatgattgccggcatgtcctcctccgc 318 ||||||| ||||||||||||||||||||| |||||| ||||||| || || || || Sbjct: 45115 catgaactcgtcgttgaacttcttgaagctatccatgatctccggcatctcatcttctgc 45174 Query: 319 aggcaggatcgttgtcctcagatggaacac 348 |||||||| |||||||||||||||||||| Sbjct: 45175 tggcaggattgttgtcctcagatggaacac 45204 Score = 56.0 bits (28), Expect = 1e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 349 cccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaag 408 |||||||||||| ||||| || ||||| || || ||||| ||||| |||||||| | || Sbjct: 45286 cccttctttctgtccaaatccagagccaggtactgtggagattcctgtggcttctaagag 45345 Query: 409 cttgaggcagtagtaaacatcgggctctttgccagc 444 |||||| |||||| |||| || ||| |||| ||||| Sbjct: 45346 cttgagacagtagaaaacgtctggcacttttccagc 45381
>gb|AY084890.1| Arabidopsis thaliana clone 120310 mRNA, complete sequence Length = 1782 Score = 69.9 bits (35), Expect = 9e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 320 ggcaggatcgttgtcctcagatggaacaccccttctttctgaccaaaacctgagcctgga 379 ||||| || |||||||| | ||| |||||||||||||| || ||||| || ||||||||| Sbjct: 1471 ggcagaattgttgtccttaaatgaaacaccccttctttttgtccaaatccagagcctgga 1412 Query: 380 acagtggatattccagtggcttc 402 || ||||| ||||| |||||||| Sbjct: 1411 actgtggagattcctgtggcttc 1389 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 481 tatttgcgggaaggaatacatagctccttctgtgaaattgcagac 525 |||||| ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 1310 tatttgagggaatgaatacatagcaccttctgtgaaattacagac 1266
>gb|AC010796.7|AC010796 Arabidopsis thaliana chromosome 1 BAC F24J13 genomic sequence, complete sequence Length = 87400 Score = 60.0 bits (30), Expect = 8e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 349 cccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaag 408 ||||||||| || ||||| || ||||||||||| ||||| ||||| |||||||| | || Sbjct: 65550 cccttctttttgtccaaatccagagcctggaactgtggagattcctgtggcttctaagag 65491 Query: 409 cttgaggcagtagtaaac 426 ||| ||||||||| |||| Sbjct: 65490 cttaaggcagtagaaaac 65473 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 481 tatttgcgggaaggaatacatagctccttctgtgaaattgcagac 525 |||||| ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 65418 tatttgagggaatgaatacatagcaccttctgtgaaattacagac 65374
>gb|AC011663.7|AC011663 Arabidopsis thaliana chromosome 1 BAC F5A18 genomic sequence, complete sequence Length = 108582 Score = 60.0 bits (30), Expect = 8e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 349 cccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaag 408 ||||||||| || ||||| || ||||||||||| ||||| ||||| |||||||| | || Sbjct: 88952 cccttctttttgtccaaatccagagcctggaactgtggagattcctgtggcttctaagag 89011 Query: 409 cttgaggcagtagtaaac 426 ||| ||||||||| |||| Sbjct: 89012 cttaaggcagtagaaaac 89029 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 481 tatttgcgggaaggaatacatagctccttctgtgaaattgcagac 525 |||||| ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 89084 tatttgagggaatgaatacatagcaccttctgtgaaattacagac 89128
>ref|NM_001036006.1| Arabidopsis thaliana GGT1 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 1) AT1G23310 (GGT1) transcript variant AT1G23310.2 mRNA, complete cds Length = 2066 Score = 54.0 bits (27), Expect = 5e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 350 ccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaagc 409 ||||||||||| ||||| || ||||| || || ||||| ||||| |||||||| | ||| Sbjct: 1652 ccttctttctgtccaaatccagagccaggtactgtggagattcctgtggcttctaagagc 1593 Query: 410 ttgaggcagtagtaaacatcgggctctttgccagc 444 ||||| |||||| |||| || ||| |||| ||||| Sbjct: 1592 ttgagacagtagaaaacgtctggcacttttccagc 1558 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 479 cgtatttgcgggaaggaatacatagctccttctgtgaaattgca 522 |||||||| || || |||||||| || ||||||||||||||||| Sbjct: 1523 cgtatttgaggaaacgaatacattgcaccttctgtgaaattgca 1480 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 259 catgaacgagtcgttgaacttcttgaagct 288 ||||||| ||||||||||||||||||||| Sbjct: 1711 catgaactcgtcgttgaacttcttgaagct 1682
>emb|AL445565.1|MPULM03 Mycoplasma pulmonis (strain UAB CTIP) complete genome; segment 3/3 Length = 315079 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 156 aatcaacttcaattgctggtagaaaa 181 |||||||||||||| ||||||||||| Sbjct: 147420 aatcaacttcaattcctggtagaaaa 147395
>gb|AC138452.10| Medicago truncatula clone mth2-17p11, complete sequence Length = 127710 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 382 agtggatattccagtggcttc 402 ||||||||||||||||||||| Sbjct: 34180 agtggatattccagtggcttc 34200
>gb|AC147430.9| Medicago truncatula clone mth2-71e6, complete sequence Length = 125478 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 382 agtggatattccagtggcttc 402 ||||||||||||||||||||| Sbjct: 115795 agtggatattccagtggcttc 115815
>emb|AJ720975.1| Gallus gallus mRNA for hypothetical protein, clone 31j3 Length = 800 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 atgtcctcctccgcaggcagg 325 ||||||||||||||||||||| Sbjct: 344 atgtcctcctccgcaggcagg 364
>ref|NM_001006475.1| Gallus gallus enhancer of rudimentary homolog (Drosophila) (ERH), mRNA Length = 800 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 atgtcctcctccgcaggcagg 325 ||||||||||||||||||||| Sbjct: 344 atgtcctcctccgcaggcagg 364
>emb|CR406877.1| Gallus gallus finished cDNA, clone ChEST930h15 Length = 832 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 atgtcctcctccgcaggcagg 325 ||||||||||||||||||||| Sbjct: 392 atgtcctcctccgcaggcagg 412
>emb|CR388924.1| Gallus gallus finished cDNA, clone ChEST170e11 Length = 682 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 atgtcctcctccgcaggcagg 325 ||||||||||||||||||||| Sbjct: 244 atgtcctcctccgcaggcagg 264
>emb|BX323837.7| Zebrafish DNA sequence from clone DKEY-5N7 in linkage group 18, complete sequence Length = 228251 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 atttcttatggattaattatt 23 ||||||||||||||||||||| Sbjct: 14701 atttcttatggattaattatt 14721
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 ctcgacatgattgccggcat 306 |||||||||||||||||||| Sbjct: 1773520 ctcgacatgattgccggcat 1773539
>gb|AF335994.2| Lepidopsocid RS-2001 mitochondrion, complete genome Length = 16924 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 tttcttatggattaattatt 23 |||||||||||||||||||| Sbjct: 9400 tttcttatggattaattatt 9381
>gb|AC161245.2| Mus musculus BAC clone RP24-394N21 from chromosome 9, complete sequence Length = 177389 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 ccagtggcttccagaagctt 411 |||||||||||||||||||| Sbjct: 28841 ccagtggcttccagaagctt 28860
>gb|AC026813.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-119M19, complete sequence Length = 113770 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 tggcttccagaagcttgagg 415 |||||||||||||||||||| Sbjct: 55050 tggcttccagaagcttgagg 55031
>emb|CR956360.10| Pig DNA sequence from clone CH242-245E12 on chromosome 7, complete sequence Length = 185507 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 ttttattctctcttcacagc 235 |||||||||||||||||||| Sbjct: 100464 ttttattctctcttcacagc 100445
>gb|AC092213.4| Homo sapiens BAC clone RP11-190I6 from 7, complete sequence Length = 137237 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 atattatgtagtagtaaatt 66 |||||||||||||||||||| Sbjct: 102067 atattatgtagtagtaaatt 102048
>gb|AC007270.2| Homo sapiens BAC clone GS1-77A9 from 7, complete sequence Length = 182958 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 atattatgtagtagtaaatt 66 |||||||||||||||||||| Sbjct: 108107 atattatgtagtagtaaatt 108126
>emb|AL603649.9| Human DNA sequence from clone RP11-326N3 on chromosome 9 Contains part of the CRSP8 gene for subunit 8 of a cofactor required for Sp1 transcriptional activation and a CpG island, complete sequence Length = 77621 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 cgcaattacagtatcatcatatta 52 ||||||||||||||||| |||||| Sbjct: 69136 cgcaattacagtatcataatatta 69113
>emb|AL603907.12| Mouse DNA sequence from clone RP23-139D10 on chromosome 11 Contains a novel gene, complete sequence Length = 226006 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 acctgagcctggaacagtgg 386 |||||||||||||||||||| Sbjct: 90286 acctgagcctggaacagtgg 90305
>gb|AC151822.29| Medicago truncatula clone mth2-32h21, complete sequence Length = 118094 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 cagttttcttcaccatagtt 138 |||||||||||||||||||| Sbjct: 51301 cagttttcttcaccatagtt 51320
>gb|AC091214.20| Homo sapiens 12q BAC RP11-13F9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 143331 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 ccccttctttctgaccaaaacctg 371 ||||| |||||||||||||||||| Sbjct: 121001 cccctcctttctgaccaaaacctg 120978
>gb|AC009084.9| Homo sapiens chromosome 16 clone RP11-361L15, complete sequence Length = 183864 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 tgctacatccatagctcttt 470 |||||||||||||||||||| Sbjct: 133185 tgctacatccatagctcttt 133166
>gb|AY842710.1| Onesia tibialis voucher ABTC71192 NADH dehydrogenase subunit 4L and NADH dehydrogenase subunit 4 genes, partial sequence; mitochondrial Length = 1563 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ttatttcttatggattaatt 20 |||||||||||||||||||| Sbjct: 382 ttatttcttatggattaatt 401
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 agtcgttgaacttcttgaag 286 |||||||||||||||||||| Sbjct: 1854031 agtcgttgaacttcttgaag 1854050
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 363 caaaacctgagcctggaacagtgg 386 |||| ||||||||||||||||||| Sbjct: 2118155 caaagcctgagcctggaacagtgg 2118132
>gb|AC138456.5| Mus musculus BAC clone RP24-262P4 from 3, complete sequence Length = 166191 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 cagaagcttgaggcagtagt 422 |||||||||||||||||||| Sbjct: 87942 cagaagcttgaggcagtagt 87961
>emb|AL954192.3| Zebrafish DNA sequence from clone CH211-215D15, complete sequence Length = 198052 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tatttcttatggattaatta 21 |||||||||||||||||||| Sbjct: 68597 tatttcttatggattaatta 68616
>gb|AC161596.2| Mus musculus BAC clone RP23-477K6 from chromosome 9, complete sequence Length = 187832 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 ccagtggcttccagaagctt 411 |||||||||||||||||||| Sbjct: 186995 ccagtggcttccagaagctt 187014 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,054,163 Number of Sequences: 3902068 Number of extensions: 5054163 Number of successful extensions: 94932 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 94722 Number of HSP's gapped (non-prelim): 210 length of query: 568 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 545 effective length of database: 17,143,297,704 effective search space: 9343097248680 effective search space used: 9343097248680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)