ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd21m10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FUR2_DROME (P30432) Furin-like protease 2 precursor (EC 3.4.21.7... 31 3.7
2YQJI_SHIFL (P64589) Hypothetical protein yqjI 30 8.3
3YQJI_ECOLI (P64588) Hypothetical protein yqjI 30 8.3

>FUR2_DROME (P30432) Furin-like protease 2 precursor (EC 3.4.21.75) (Furin-2)|
          Length = 1679

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +1

Query: 256  RGPSLQFRC*ARRLQPLCY-RPPPTSS*NHVGLPWSCSPLC 375
            RGP+    C   RL   C  R PP S  N VG+ W C   C
Sbjct: 979  RGPTQCVACSHYRLDNTCVSRCPPRSFPNQVGICWPCHDTC 1019



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>YQJI_SHIFL (P64589) Hypothetical protein yqjI|
          Length = 207

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -2

Query: 587 HTEGCC*SWCPPRHVGCC 534
           H EGCC     PRH GCC
Sbjct: 4   HHEGCCKHEGQPRHEGCC 21



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>YQJI_ECOLI (P64588) Hypothetical protein yqjI|
          Length = 207

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -2

Query: 587 HTEGCC*SWCPPRHVGCC 534
           H EGCC     PRH GCC
Sbjct: 4   HHEGCCKHEGQPRHEGCC 21


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,434,297
Number of Sequences: 219361
Number of extensions: 2472128
Number of successful extensions: 6629
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6629
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6257125380
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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