ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd21m10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476904.1| Oryza sativa (japonica cultivar-group), mRNA 135 2e-28
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
3dbj|AP003861.2| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
4dbj|AP003753.3| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
5dbj|AK066157.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
6gb|BT024104.1| Zea mays clone EL01N0520G08 mRNA sequence 113 7e-22
7gb|AY105898.1| Zea mays PCO133189 mRNA sequence 105 2e-19
8dbj|AK060743.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 2e-10
9gb|AC113547.27| Mus musculus chromosome 12, clone RP23-263J2, co... 42 2.3
10emb|AJ310150.1|LUS310150 Linum usitatissimum Ngc-D, Ngc-A and Ng... 42 2.3
11gb|AY377856.1| Brassica napus TOC33 (Toc33) gene, complete cds; ... 42 2.3
12emb|AL663054.9| Mouse DNA sequence from clone RP23-480G5 on chro... 42 2.3
13dbj|AK082156.1| Mus musculus 0 day neonate cerebellum cDNA, RIKE... 42 2.3
14emb|CT030030.12| Mouse DNA sequence from clone RP23-123J19 on ch... 42 2.3
15gb|AY657927.1| Synthetic construct Peudomonas aeruginosa clone F... 40 9.0
16ref|XM_539971.2| PREDICTED: Canis familiaris similar to potassiu... 40 9.0
17gb|AC091768.4| Homo sapiens BAC clone RP11-703N5 from 7, complet... 40 9.0
18gb|AC151819.2| Xenopus tropicalis BAC clone ISB1-243M8 containin... 40 9.0
19gb|AC023315.4| Homo sapiens chromosome 17, clone RP11-333J10, co... 40 9.0
20dbj|AK085236.1| Mus musculus 13 days embryo stomach cDNA, RIKEN ... 40 9.0
21dbj|AK085224.1| Mus musculus 13 days embryo stomach cDNA, RIKEN ... 40 9.0
22dbj|AK081351.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 9.0
23gb|AF283254.1|AF283254 Mus musculus gap junction protein connexi... 40 9.0
24gb|AE004743.1| Pseudomonas aeruginosa PAO1, section 304 of 529 o... 40 9.0
25gb|AC154353.1| Mus musculus BAC clone RP24-547N14 from chromosom... 40 9.0
26emb|BX255894.19| Zebrafish DNA sequence from clone CH211-251G8 i... 40 9.0
27emb|AL929067.8| Mouse DNA sequence from clone RP24-69A20 on chro... 40 9.0
28emb|AL831778.8| Mouse DNA sequence from clone RP23-261L23 on chr... 40 9.0
29emb|AJ300716.1|MMU300716 Mus musculus Cx45 gene for connexin 45,... 40 9.0 
>ref|XM_476904.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1565

 Score =  135 bits (68), Expect = 2e-28
 Identities = 190/230 (82%), Gaps = 3/230 (1%)
 Strand = Plus / Minus

                                                                       
Query: 420 gaaccagcaatgcatgtcttggtggtcacccgagccatgatggcactgtgtgacagtatg 479
           |||| ||||||  ||||||||||||| || |||||||||||||||||| | || ||  ||
Sbjct: 994 gaactagcaatagatgtcttggtggttactcgagccatgatggcactgcgagagagggtg 935

                                                                       
Query: 480 tgttctgattttctcattagctgatatgctctaaagccggactgcagctttttaacagca 539
           |  ||||  | ||||||| |||| ||||||||||| |||||||| | ||| || ||||||
Sbjct: 934 ttctctgtgtctctcatttgctggtatgctctaaatccggactggaacttctttacagca 875

                                                                       
Query: 540 ccccacatgccgtggcggacaccaactttagcaacatccttcggtatgcccatgtcctca 599
           ||||||||||| || |||||||| || || || ||||| || || |||||||||||||| 
Sbjct: 874 ccccacatgccatgccggacacccaccttggcgacatctttagggatgcccatgtcctcg 815

                                                             
Query: 600 tagtgaaacagagttacttcacatgccatgggttgctgcccatcttgttt 649
           ||||| | ||| ||||||||||||||   || |||||| |||||||||||
Sbjct: 814 tagtggaccagcgttacttcacatgc---ggattgctgtccatcttgttt 768



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 96/115 (83%), Gaps = 3/115 (2%)
 Strand = Plus / Minus

                                                                        
Query: 222  cacttctttgcctgccttcttg---cagctccaagtaagagggccttccctacaattccg 278
            |||||||| |||||||||||||   ||||||| |  | ||| |||||||| ||||  || 
Sbjct: 1195 cacttcttcgcctgccttcttgatgcagctccgatgaggagagccttcccaacaagccca 1136

                                                                   
Query: 279  gtgttaagcacgcagactgcagccactgtgctaccgaccaccacccacttccagt 333
            ||||| ||||||||||| |||||||||| || ||||| ||||||||| |||||||
Sbjct: 1135 gtgttgagcacgcagacggcagccactgcgccaccgaacaccacccatttccagt 1081
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  135 bits (68), Expect = 2e-28
 Identities = 190/230 (82%), Gaps = 3/230 (1%)
 Strand = Plus / Plus

                                                                           
Query: 420     gaaccagcaatgcatgtcttggtggtcacccgagccatgatggcactgtgtgacagtatg 479
               |||| ||||||  ||||||||||||| || |||||||||||||||||| | || ||  ||
Sbjct: 4536094 gaactagcaatagatgtcttggtggttactcgagccatgatggcactgcgagagagggtg 4536153

                                                                           
Query: 480     tgttctgattttctcattagctgatatgctctaaagccggactgcagctttttaacagca 539
               |  ||||  | ||||||| |||| ||||||||||| |||||||| | ||| || ||||||
Sbjct: 4536154 ttctctgtgtctctcatttgctggtatgctctaaatccggactggaacttctttacagca 4536213

                                                                           
Query: 540     ccccacatgccgtggcggacaccaactttagcaacatccttcggtatgcccatgtcctca 599
               ||||||||||| || |||||||| || || || ||||| || || |||||||||||||| 
Sbjct: 4536214 ccccacatgccatgccggacacccaccttggcgacatctttagggatgcccatgtcctcg 4536273

                                                                 
Query: 600     tagtgaaacagagttacttcacatgccatgggttgctgcccatcttgttt 649
               ||||| | ||| ||||||||||||||   || |||||| |||||||||||
Sbjct: 4536274 tagtggaccagcgttacttcacatgc---ggattgctgtccatcttgttt 4536320



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 96/115 (83%), Gaps = 3/115 (2%)
 Strand = Plus / Plus

                                                                           
Query: 222     cacttctttgcctgccttcttg---cagctccaagtaagagggccttccctacaattccg 278
               |||||||| |||||||||||||   ||||||| |  | ||| |||||||| ||||  || 
Sbjct: 4535893 cacttcttcgcctgccttcttgatgcagctccgatgaggagagccttcccaacaagccca 4535952

                                                                      
Query: 279     gtgttaagcacgcagactgcagccactgtgctaccgaccaccacccacttccagt 333
               ||||| ||||||||||| |||||||||| || ||||| ||||||||| |||||||
Sbjct: 4535953 gtgttgagcacgcagacggcagccactgcgccaccgaacaccacccatttccagt 4536007
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>dbj|AP003861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1046_F10
          Length = 118472

 Score =  135 bits (68), Expect = 2e-28
 Identities = 190/230 (82%), Gaps = 3/230 (1%)
 Strand = Plus / Plus

                                                                          
Query: 420    gaaccagcaatgcatgtcttggtggtcacccgagccatgatggcactgtgtgacagtatg 479
              |||| ||||||  ||||||||||||| || |||||||||||||||||| | || ||  ||
Sbjct: 114813 gaactagcaatagatgtcttggtggttactcgagccatgatggcactgcgagagagggtg 114872

                                                                          
Query: 480    tgttctgattttctcattagctgatatgctctaaagccggactgcagctttttaacagca 539
              |  ||||  | ||||||| |||| ||||||||||| |||||||| | ||| || ||||||
Sbjct: 114873 ttctctgtgtctctcatttgctggtatgctctaaatccggactggaacttctttacagca 114932

                                                                          
Query: 540    ccccacatgccgtggcggacaccaactttagcaacatccttcggtatgcccatgtcctca 599
              ||||||||||| || |||||||| || || || ||||| || || |||||||||||||| 
Sbjct: 114933 ccccacatgccatgccggacacccaccttggcgacatctttagggatgcccatgtcctcg 114992

                                                                
Query: 600    tagtgaaacagagttacttcacatgccatgggttgctgcccatcttgttt 649
              ||||| | ||| ||||||||||||||   || |||||| |||||||||||
Sbjct: 114993 tagtggaccagcgttacttcacatgc---ggattgctgtccatcttgttt 115039



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 96/115 (83%), Gaps = 3/115 (2%)
 Strand = Plus / Plus

                                                                          
Query: 222    cacttctttgcctgccttcttg---cagctccaagtaagagggccttccctacaattccg 278
              |||||||| |||||||||||||   ||||||| |  | ||| |||||||| ||||  || 
Sbjct: 114612 cacttcttcgcctgccttcttgatgcagctccgatgaggagagccttcccaacaagccca 114671

                                                                     
Query: 279    gtgttaagcacgcagactgcagccactgtgctaccgaccaccacccacttccagt 333
              ||||| ||||||||||| |||||||||| || ||||| ||||||||| |||||||
Sbjct: 114672 gtgttgagcacgcagacggcagccactgcgccaccgaacaccacccatttccagt 114726
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>dbj|AP003753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1339_B08
          Length = 119212

 Score =  135 bits (68), Expect = 2e-28
 Identities = 190/230 (82%), Gaps = 3/230 (1%)
 Strand = Plus / Plus

                                                                        
Query: 420  gaaccagcaatgcatgtcttggtggtcacccgagccatgatggcactgtgtgacagtatg 479
            |||| ||||||  ||||||||||||| || |||||||||||||||||| | || ||  ||
Sbjct: 1434 gaactagcaatagatgtcttggtggttactcgagccatgatggcactgcgagagagggtg 1493

                                                                        
Query: 480  tgttctgattttctcattagctgatatgctctaaagccggactgcagctttttaacagca 539
            |  ||||  | ||||||| |||| ||||||||||| |||||||| | ||| || ||||||
Sbjct: 1494 ttctctgtgtctctcatttgctggtatgctctaaatccggactggaacttctttacagca 1553

                                                                        
Query: 540  ccccacatgccgtggcggacaccaactttagcaacatccttcggtatgcccatgtcctca 599
            ||||||||||| || |||||||| || || || ||||| || || |||||||||||||| 
Sbjct: 1554 ccccacatgccatgccggacacccaccttggcgacatctttagggatgcccatgtcctcg 1613

                                                              
Query: 600  tagtgaaacagagttacttcacatgccatgggttgctgcccatcttgttt 649
            ||||| | ||| ||||||||||||||   || |||||| |||||||||||
Sbjct: 1614 tagtggaccagcgttacttcacatgc---ggattgctgtccatcttgttt 1660



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 96/115 (83%), Gaps = 3/115 (2%)
 Strand = Plus / Plus

                                                                        
Query: 222  cacttctttgcctgccttcttg---cagctccaagtaagagggccttccctacaattccg 278
            |||||||| |||||||||||||   ||||||| |  | ||| |||||||| ||||  || 
Sbjct: 1233 cacttcttcgcctgccttcttgatgcagctccgatgaggagagccttcccaacaagccca 1292

                                                                   
Query: 279  gtgttaagcacgcagactgcagccactgtgctaccgaccaccacccacttccagt 333
            ||||| ||||||||||| |||||||||| || ||||| ||||||||| |||||||
Sbjct: 1293 gtgttgagcacgcagacggcagccactgcgccaccgaacaccacccatttccagt 1347
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>dbj|AK066157.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059B01, full
            insert sequence
          Length = 1650

 Score =  135 bits (68), Expect = 2e-28
 Identities = 190/230 (82%), Gaps = 3/230 (1%)
 Strand = Plus / Minus

                                                                        
Query: 420  gaaccagcaatgcatgtcttggtggtcacccgagccatgatggcactgtgtgacagtatg 479
            |||| ||||||  ||||||||||||| || |||||||||||||||||| | || ||  ||
Sbjct: 1079 gaactagcaatagatgtcttggtggttactcgagccatgatggcactgcgagagagggtg 1020

                                                                        
Query: 480  tgttctgattttctcattagctgatatgctctaaagccggactgcagctttttaacagca 539
            |  ||||  | ||||||| |||| ||||||||||| |||||||| | ||| || ||||||
Sbjct: 1019 ttctctgtgtctctcatttgctggtatgctctaaatccggactggaacttctttacagca 960

                                                                        
Query: 540  ccccacatgccgtggcggacaccaactttagcaacatccttcggtatgcccatgtcctca 599
            ||||||||||| || |||||||| || || || ||||| || || |||||||||||||| 
Sbjct: 959  ccccacatgccatgccggacacccaccttggcgacatctttagggatgcccatgtcctcg 900

                                                              
Query: 600  tagtgaaacagagttacttcacatgccatgggttgctgcccatcttgttt 649
            ||||| | ||| ||||||||||||||   || |||||| |||||||||||
Sbjct: 899  tagtggaccagcgttacttcacatgc---ggattgctgtccatcttgttt 853



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 96/115 (83%), Gaps = 3/115 (2%)
 Strand = Plus / Minus

                                                                        
Query: 222  cacttctttgcctgccttcttg---cagctccaagtaagagggccttccctacaattccg 278
            |||||||| |||||||||||||   ||||||| |  | ||| |||||||| ||||  || 
Sbjct: 1280 cacttcttcgcctgccttcttgatgcagctccgatgaggagagccttcccaacaagccca 1221

                                                                   
Query: 279  gtgttaagcacgcagactgcagccactgtgctaccgaccaccacccacttccagt 333
            ||||| ||||||||||| |||||||||| || ||||| ||||||||| |||||||
Sbjct: 1220 gtgttgagcacgcagacggcagccactgcgccaccgaacaccacccatttccagt 1166
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>gb|BT024104.1| Zea mays clone EL01N0520G08 mRNA sequence
          Length = 1769

 Score =  113 bits (57), Expect = 7e-22
 Identities = 150/181 (82%)
 Strand = Plus / Minus

                                                                        
Query: 439  tggtggtcacccgagccatgatggcactgtgtgacagtatgtgttctgattttctcatta 498
            |||||||||  |||||||| ||||| |||||||||||  | | |||||  | ||||||| 
Sbjct: 1225 tggtggtcattcgagccataatggcgctgtgtgacagggtattttctgtgtctctcattt 1166

                                                                        
Query: 499  gctgatatgctctaaagccggactgcagctttttaacagcaccccacatgccgtggcgga 558
            |||| || ||||| || || ||||| || || || ||||||||||||||||||||||| |
Sbjct: 1165 gctggtacgctctgaacccagactgaagtttcttcacagcaccccacatgccgtggcgaa 1106

                                                                        
Query: 559  caccaactttagcaacatccttcggtatgcccatgtcctcatagtgaaacagagttactt 618
            || ||||  | || ||||| || ||||||||||||||||||||||||| || ||||||||
Sbjct: 1105 cagcaaccctggctacatcttttggtatgcccatgtcctcatagtgaaccaaagttactt 1046

             
Query: 619  c 619
            |
Sbjct: 1045 c 1045



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 93/112 (83%)
 Strand = Plus / Minus

                                                                        
Query: 222  cacttctttgcctgccttcttgcagctccaagtaagagggccttccctacaattccggtg 281
            |||||||||||||||||||| || |||||||| || ||| |||| ||||| | |||||||
Sbjct: 1442 cacttctttgcctgccttctcgctgctccaagcaacaggaccttgcctaccaatccggtg 1383

                                                                
Query: 282  ttaagcacgcagactgcagccactgtgctaccgaccaccacccacttccagt 333
            || ||||| || || |||||||| |  | ||| | ||||||||| |||||||
Sbjct: 1382 ttgagcacacaaaccgcagccaccgcaccaccaaacaccacccatttccagt 1331
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>gb|AY105898.1| Zea mays PCO133189 mRNA sequence
          Length = 681

 Score =  105 bits (53), Expect = 2e-19
 Identities = 149/181 (82%)
 Strand = Plus / Minus

                                                                       
Query: 439 tggtggtcacccgagccatgatggcactgtgtgacagtatgtgttctgattttctcatta 498
           |||||||||  |||||||| ||||| |||||||||||  | | |||||  | ||||||| 
Sbjct: 671 tggtggtcattcgagccataatggcgctgtgtgacagggtattttctgtgtctctcattt 612

                                                                       
Query: 499 gctgatatgctctaaagccggactgcagctttttaacagcaccccacatgccgtggcgga 558
           |||| || ||||| || || ||||| || || || ||||||||||||||||||||||| |
Sbjct: 611 gctggtacgctctgaacccagactgaagtttcttcacagcaccccacatgccgtggcgaa 552

                                                                       
Query: 559 caccaactttagcaacatccttcggtatgcccatgtcctcatagtgaaacagagttactt 618
            | ||||  | || ||||| || ||||||||||||||||||||||||| || ||||||||
Sbjct: 551 tagcaaccctggctacatcttttggtatgcccatgtcctcatagtgaaccaaagttactt 492

            
Query: 619 c 619
           |
Sbjct: 491 c 491
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>dbj|AK060743.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-E03, full
            insert sequence
          Length = 1838

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 97/116 (83%), Gaps = 3/116 (2%)
 Strand = Plus / Minus

                                                                        
Query: 534  acagcaccccacatgccgtggcggacaccaactttagcaacatccttcggtatgcccatg 593
            ||||||||||||||||| || |||||||| || || || ||||| || || |||||||||
Sbjct: 1459 acagcaccccacatgccatgccggacacccaccttggcgacatctttagggatgcccatg 1400

                                                                    
Query: 594  tcctcatagtgaaacagagttacttcacatgccatgggttgctgcccatcttgttt 649
            ||||| ||||| | ||| ||||| ||||||||   || |||||| |||||||||||
Sbjct: 1399 tcctcgtagtggaccagcgttacctcacatgc---ggattgctgtccatcttgttt 1347
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>gb|AC113547.27| Mus musculus chromosome 12, clone RP23-263J2, complete sequence
          Length = 197242

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 224    cttctttgcctgccttcttgc 244
              |||||||||||||||||||||
Sbjct: 186161 cttctttgcctgccttcttgc 186141
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>emb|AJ310150.1|LUS310150 Linum usitatissimum Ngc-D, Ngc-A and Ngc-B genes, cultivar Bombay
          Length = 25054

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 143   ggtctcgattgcaactttcta 163
             |||||||||||||||||||||
Sbjct: 19938 ggtctcgattgcaactttcta 19958
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>gb|AY377856.1| Brassica napus TOC33 (Toc33) gene, complete cds; nuclear gene for
            chloroplast product
          Length = 1376

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 402  tgatccaaggagccatcagaa 422
            |||||||||||||||||||||
Sbjct: 1324 tgatccaaggagccatcagaa 1344
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>emb|AL663054.9| Mouse DNA sequence from clone RP23-480G5 on chromosome 11 Contains the
             5' end of the Myo1d gene for myosin ID, a novel gene and a
             mitochondrial ribosomal protein L27 (Mrpl27) pseudogene,
             complete sequence
          Length = 82452

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 62    atactgcttacaagacacaat 82
             |||||||||||||||||||||
Sbjct: 21285 atactgcttacaagacacaat 21265
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>dbj|AK082156.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:C230015M18 product:hypothetical
            protein, full insert sequence
          Length = 4401

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 224  cttctttgcctgccttcttgc 244
            |||||||||||||||||||||
Sbjct: 1203 cttctttgcctgccttcttgc 1183
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>emb|CT030030.12| Mouse DNA sequence from clone RP23-123J19 on chromosome 12, complete
             sequence
          Length = 201738

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 224   cttctttgcctgccttcttgc 244
             |||||||||||||||||||||
Sbjct: 19840 cttctttgcctgccttcttgc 19820
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>gb|AY657927.1| Synthetic construct Peudomonas aeruginosa clone FLH046013.01F
           PA3196 gene, partial cds
          Length = 531

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 308 gctaccgaccaccacccact 327
           ||||||||||||||||||||
Sbjct: 192 gctaccgaccaccacccact 173
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>ref|XM_539971.2| PREDICTED: Canis familiaris similar to potassium large conductance
            pH-sensitive channel, subfamily M, alpha member 3
            (LOC482856), mRNA
          Length = 4041

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 411  gagccatcagaaccagcaat 430
            ||||||||||||||||||||
Sbjct: 1235 gagccatcagaaccagcaat 1254
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>gb|AC091768.4| Homo sapiens BAC clone RP11-703N5 from 7, complete sequence
          Length = 104955

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 466   tgtgtgacagtatgtgttctgattttct 493
             ||||| |||||||||||| |||||||||
Sbjct: 71418 tgtgtaacagtatgtgttatgattttct 71391
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>gb|AC151819.2| Xenopus tropicalis BAC clone ISB1-243M8 containing hairy2 gene,
            complete cds, complete sequence
          Length = 91756

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 623  tgccatgggttgctgcccat 642
            ||||||||||||||||||||
Sbjct: 3999 tgccatgggttgctgcccat 3980
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>gb|AC023315.4| Homo sapiens chromosome 17, clone RP11-333J10, complete sequence
          Length = 135692

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   ggtatgaatctcattccttt 137
             ||||||||||||||||||||
Sbjct: 69375 ggtatgaatctcattccttt 69356
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>dbj|AK085236.1| Mus musculus 13 days embryo stomach cDNA, RIKEN full-length
           enriched library, clone:D530032L01
           product:unclassifiable, full insert sequence
          Length = 3200

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 230 tgcctgccttcttgcagctc 249
           ||||||||||||||||||||
Sbjct: 150 tgcctgccttcttgcagctc 131
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>dbj|AK085224.1| Mus musculus 13 days embryo stomach cDNA, RIKEN full-length
           enriched library, clone:D530024I09
           product:unclassifiable, full insert sequence
          Length = 3199

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 230 tgcctgccttcttgcagctc 249
           ||||||||||||||||||||
Sbjct: 150 tgcctgccttcttgcagctc 131
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>dbj|AK081351.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
           library, clone:C130009G16 product:gap junction membrane
           channel protein alpha 7, full insert sequence
          Length = 3412

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 230 tgcctgccttcttgcagctc 249
           ||||||||||||||||||||
Sbjct: 919 tgcctgccttcttgcagctc 900
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>gb|AF283254.1|AF283254 Mus musculus gap junction protein connexin45 (Gja6) gene, partial
           cds
          Length = 4591

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 230 tgcctgccttcttgcagctc 249
           ||||||||||||||||||||
Sbjct: 617 tgcctgccttcttgcagctc 598
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>gb|AE004743.1| Pseudomonas aeruginosa PAO1, section 304 of 529 of the complete
            genome
          Length = 10146

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 308  gctaccgaccaccacccact 327
            ||||||||||||||||||||
Sbjct: 8777 gctaccgaccaccacccact 8796
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>gb|AC154353.1| Mus musculus BAC clone RP24-547N14 from chromosome 12, complete
             sequence
          Length = 249825

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 487   attttctcattagctgatat 506
             ||||||||||||||||||||
Sbjct: 25257 attttctcattagctgatat 25238
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>emb|BX255894.19| Zebrafish DNA sequence from clone CH211-251G8 in linkage group 19,
              complete sequence
          Length = 180950

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 326    cttccagttgaaaccatgtt 345
              ||||||||||||||||||||
Sbjct: 170004 cttccagttgaaaccatgtt 170023
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>emb|AL929067.8| Mouse DNA sequence from clone RP24-69A20 on chromosome 11, complete
             sequence
          Length = 87925

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   tgcctgccttcttgcagctc 249
             ||||||||||||||||||||
Sbjct: 61724 tgcctgccttcttgcagctc 61743
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>emb|AL831778.8| Mouse DNA sequence from clone RP23-261L23 on chromosome 4, complete
              sequence
          Length = 213495

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 485    tgattttctcattagctgat 504
              ||||||||||||||||||||
Sbjct: 146473 tgattttctcattagctgat 146492
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>emb|AJ300716.1|MMU300716 Mus musculus Cx45 gene for connexin 45, exons 1-3
          Length = 8415

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 230 tgcctgccttcttgcagctc 249
           ||||||||||||||||||||
Sbjct: 923 tgcctgccttcttgcagctc 904


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,435,452
Number of Sequences: 3902068
Number of extensions: 5435452
Number of successful extensions: 91973
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91889
Number of HSP's gapped (non-prelim): 70
length of query: 657
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 634
effective length of database: 17,143,297,704
effective search space: 10868850744336
effective search space used: 10868850744336
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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