>EMSY_BRARE (Q7ZUV7) Protein EMSY|
          Length = 1173

 Score = 33.5 bits (75), Expect = 0.39
 Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
 Frame = +3

Query: 180 TTKALSERNSTGATYTCP--SELLTNVCDKVMMHTFFYRTTQGSLXRNLTEQLTPASGKF 353
           TTK +S    + +TYT P  S + T V       T+  +TT GS+   + + L    GK 
Sbjct: 475 TTKLVSTPTGSASTYTRPTVSPMGTRVATSPAGATYV-KTTSGSIITVVPKALATLGGKI 533

Query: 354 *ETKMLPGTT 383
             T M+ GTT
Sbjct: 534 ITTSMVSGTT 543

>EMSY_MOUSE (Q8BMB0) Protein EMSY|
          Length = 1264

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = +3

Query: 180 TTKALSERNSTGATYTCP--SELLTNVCDKVMMHTFFYRTTQGSLXRNLTEQLTPASGKF 353
           TTK ++    T ATYT P  S  L  V       T+  +TT GS+   + + L    GK 
Sbjct: 460 TTKLVTTPTGTQATYTRPTVSPSLGRVATTPGAATYV-KTTSGSIITVVPKSLATLGGKI 518

Query: 354 *ETKMLPGTT 383
             + ++ GTT
Sbjct: 519 ISSNIVSGTT 528

>ITA2_BOVIN (P53710) Integrin alpha-2 precursor (Platelet membrane glycoprotein|
           Ia) (GPIa) (Collagen receptor) (VLA-2 alpha chain)
           (CD49b antigen) (Fragment)
          Length = 1170

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +3

Query: 201 RNSTGATYTCPSELLTNVCDKVMMHTFFYRTTQGSLXRNLTEQLT 335
           +N  G  Y CP +L T  C+K+ + T    +    +  N++  LT
Sbjct: 63  KNRMGDVYKCPVDLSTTTCEKLNLQTSTSMSNVTEMKTNMSLGLT 107

>YDI2_SCHPO (Q92340) Hypothetical protein C1F8.02c in chromosome I|
          Length = 226

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 33/151 (21%), Positives = 55/151 (36%), Gaps = 10/151 (6%)
 Frame = +3

Query: 24  FLRSLAGKYIRHHQH------YQKVYILFP*PLSLSIHTYIH-TFLVQQRLHTHMYFYST 182
           FL+ +   Y+ + +       +   Y     P  +S   Y+   +L  + +  +  FY  
Sbjct: 14  FLKGINSAYVSNEEGETVDFTFSGFYANLTYPNEISELNYVEGNYLSTRIVRFNGSFYCD 73

Query: 183 TKALSERNS-TGATYT--CPSELLTNVCDKVMMHTFFYRTTQGSLXRNLTEQLTPASGKF 353
           T  LSE N+ TG+ Y   C ++ +  +CD                           SGK 
Sbjct: 74  TTILSETNNVTGSCYVANCANDTVLEICD---------------------------SGKE 106

Query: 354 *ETKMLPGTTWQ*NESKLMLKWACPNDIHEP 446
                + GTTW  +     L W C  D ++P
Sbjct: 107 VHFTDMSGTTWSADTFTENLYWFCGGDGNKP 137


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,714,831
Number of Sequences: 219361
Number of extensions: 1650917
Number of successful extensions: 3338
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3334
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4258037034
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)