ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd21m06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SAPKA_ORYSA (Q75H77) Serine/threonine-protein kinase SAPK10 (EC ... 40 0.001
2SAPK9_ORYSA (Q75V57) Serine/threonine-protein kinase SAPK9 (EC 2... 39 0.002
3SAPK8_ORYSA (Q7Y0B9) Serine/threonine-protein kinase SAPK8 (EC 2... 39 0.002
4CTR1_OCTVU (Q7YW31) Cephalotocin receptor 1 (OT/VP superfamily p... 29 2.4
5TMM28_HUMAN (O75949) Transmembrane protein 28 (TED protein) 29 3.2

>SAPKA_ORYSA (Q75H77) Serine/threonine-protein kinase SAPK10 (EC 2.7.11.1)|
           (Osmotic stress/abscisic acid-activated protein kinase
           10)
          Length = 362

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 19/20 (95%), Positives = 19/20 (95%)
 Frame = -1

Query: 382 DLDSDADLDVESSGEIVYAM 323
           DLDSD DLDVESSGEIVYAM
Sbjct: 343 DLDSDPDLDVESSGEIVYAM 362



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>SAPK9_ORYSA (Q75V57) Serine/threonine-protein kinase SAPK9 (EC 2.7.11.1)|
           (Osmotic stress/abscisic acid-activated protein kinase
           9)
          Length = 361

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = -1

Query: 382 DLDSDADLDVESSGEIVYAM 323
           D+DSD DLD+ESSGEIVYAM
Sbjct: 342 DMDSDLDLDIESSGEIVYAM 361



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>SAPK8_ORYSA (Q7Y0B9) Serine/threonine-protein kinase SAPK8 (EC 2.7.11.1)|
           (Osmotic stress/abscisic acid-activated protein kinase
           8)
          Length = 371

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 17/20 (85%), Positives = 20/20 (100%)
 Frame = -1

Query: 382 DLDSDADLDVESSGEIVYAM 323
           DLDSD+D+DV+SSGEIVYAM
Sbjct: 352 DLDSDSDIDVDSSGEIVYAM 371



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>CTR1_OCTVU (Q7YW31) Cephalotocin receptor 1 (OT/VP superfamily peptide|
           receptor-1) (OC/CE-R 1)
          Length = 397

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = -3

Query: 305 SHIS*PKDGQDTRGRD-RYLEATAEVRLLMLDSPQMLLCCCFCCWSLYFRC 156
           SH++     +D  G+   Y    +  ++  +     ++ CCF CWS +F C
Sbjct: 264 SHLARGFSEEDMEGQSVNYNRGISRAKVRSVALTLSVVACCFICWSPFFVC 314



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>TMM28_HUMAN (O75949) Transmembrane protein 28 (TED protein)|
          Length = 473

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 215 DSPQMLLCCCFCCWS 171
           D+  + +CCC CCW+
Sbjct: 12  DAAALTICCCCCCWA 26


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,999,406
Number of Sequences: 219361
Number of extensions: 787336
Number of successful extensions: 1860
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1856
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 1396778976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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