ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd22b03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_475623.1| Oryza sativa (japonica cultivar-group), predic... 379 e-102
2dbj|AK103137.1| Oryza sativa (japonica cultivar-group) cDNA clon... 379 e-102
3gb|AY105506.1| Zea mays PCO099200 mRNA sequence 299 5e-78
4dbj|AK121761.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 4e-63
5dbj|AK064784.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 4e-63
6dbj|AK060262.1| Oryza sativa (japonica cultivar-group) cDNA clon... 242 1e-60
7gb|AC119288.4| Oryza sativa (japonica cultivar-group) chromosome... 196 5e-47
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 196 5e-47
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 133 7e-28
10dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic D... 133 7e-28
11ref|NM_100803.3| Arabidopsis thaliana unknown protein AT1G09330 ... 100 9e-18
12emb|BX818022.1|CNS0AAQD Arabidopsis thaliana Full-length cDNA Co... 100 9e-18
13gb|BT004772.1| Arabidopsis thaliana At1g09330 gene, complete cds 100 9e-18
14gb|AY085379.1| Arabidopsis thaliana clone 14886 mRNA, complete s... 100 9e-18
15gb|AC006416.2|T31J12 Arabidopsis thaliana chromosome 1 BAC T31J1... 72 2e-09
16emb|X54689.1|TAAGCNN17 Wheat alpha-gliadin pseudogene (clone CNN... 70 8e-09
17emb|X54688.1|TAAGCNN35 Wheat alpha-gliadin pseudogene (clone CNN35) 70 8e-09
18emb|X54517.1|TAAGCNN16 Wheat alpha-gliadin pseudogene (clone CNN16) 70 8e-09
19gb|AC166090.23| Glycine max clone gmw1-103e11, complete sequence 62 2e-06
20emb|AL627104.16| Mouse DNA sequence from clone RP23-412B2 on chr... 46 0.12
21emb|AL358934.19| Human DNA sequence from clone RP11-459D20 on ch... 42 1.9
22gb|AC108137.8| Homo sapiens chromosome 15, clone RP11-941F15, co... 42 1.9
23dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 42 1.9
24gb|AC002337.3| Arabidopsis thaliana chromosome 2 clone T8I13 map... 42 1.9
25ref|XM_217031.2| PREDICTED: Rattus norvegicus hypothetical LOC30... 42 1.9
26gb|AC013486.12| Homo sapiens chromosome 15, clone RP11-2M12, com... 42 1.9
27emb|AL713861.10| Mouse DNA sequence from clone RP23-367H15 on ch... 42 1.9
28ref|XM_522523.1| PREDICTED: Pan troglodytes similar to squamous ... 40 7.5
29ref|NM_014706.2| Homo sapiens squamous cell carcinoma antigen re... 40 7.5
30gb|AC131065.16| Mus musculus chromosome 18, clone RP23-21J21, co... 40 7.5
31emb|CR381553.13| Zebrafish DNA sequence from clone CH211-154P8 i... 40 7.5
32emb|BX548045.6| Zebrafish DNA sequence from clone DKEY-224A6 in ... 40 7.5
33gb|AC008119.6| Homo sapiens 12 BAC RP11-951I11 (Roswell Park Can... 40 7.5
34gb|AC125453.6| Homo sapiens chromosome 8, clone RP11-1049H7, com... 40 7.5
35gb|AC127331.4| Mus musculus BAC clone RP23-127A19 from 18, compl... 40 7.5
36gb|AF239614.5| Homo sapiens chromosome 8 clone RP11-410N18, comp... 40 7.5
37emb|CR381700.6| Zebrafish DNA sequence from clone CH211-198F4 in... 40 7.5
38emb|CR407558.22| Zebrafish DNA sequence from clone CH211-107M8 i... 40 7.5
39emb|CR857568.1| Pongo pygmaeus mRNA; cDNA DKFZp469J2418 (from cl... 40 7.5
40emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, ... 40 7.5
41emb|CR933631.1| Homo sapiens mRNA; cDNA DKFZp686A09106 (from clo... 40 7.5
42emb|AL732622.4| Mouse DNA sequence from clone RP23-277G3 on chro... 40 7.5
43emb|AL935187.13| Zebrafish DNA sequence from clone DKEY-97C7 in ... 40 7.5
44gb|AF387506.1| Homo sapiens KIAA0156 isoform mRNA, complete cds 40 7.5
45dbj|AB073647.1| Homo sapiens primary neuroblastoma cDNA, clone:N... 40 7.5
46gb|AC010206.8|AC010206 Homo sapiens 12 BAC RP11-13G14 (Roswell P... 40 7.5
47gb|AY500483.1| Peziza bananincola voucher V. Demoulin 5529 (FH) ... 40 7.5
48gb|AY500465.1| Amylascus tasmanicus voucher Trappe 18084 (C, dub... 40 7.5
49gb|BC093784.1| Homo sapiens squamous cell carcinoma antigen reco... 40 7.5
50emb|CT009716.15| Zebrafish DNA sequence from clone CH73-286H23 i... 40 7.5
51gb|BC111983.1| Homo sapiens squamous cell carcinoma antigen reco... 40 7.5
52emb|BX927173.9| Zebrafish DNA sequence from clone DKEY-236J7 in ... 40 7.5
53emb|CT573365.4| M.truncatula DNA sequence from clone MTH2-89E15 ... 40 7.5
54gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 40 7.5
55emb|BX927409.14| Zebrafish DNA sequence from clone DKEY-89L19 in... 40 7.5
56gb|AC090503.12| Homo sapiens 12q BAC RP11-314D7 (Roswell Park Ca... 40 7.5
57dbj|D63879.1| Human mRNA for KIAA0156 gene, complete cds 40 7.5
58dbj|AB020880.1| Homo sapiens mRNA for squamous cell carcinoma an... 40 7.5 
>ref|XM_475623.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 669

 Score =  379 bits (191), Expect = e-102
 Identities = 301/338 (89%)
 Strand = Plus / Minus

                                                                       
Query: 206 aatgctgactgcagggatgatgtgatgcgggatgtgatggcgttttgagcggcattttca 265
           |||||||| |||||||  |||||||||||||||||||| || ||||||||   |  ||||
Sbjct: 656 aatgctgattgcagggtggatgtgatgcgggatgtgatcgcattttgagcatgaccttca 597

                                                                       
Query: 266 gcaaaagctcggatgttcttcttggcatctttgttgcatttggtgaaccccacgatgttt 325
               || | ||||| |||||||||||||||||||||||| |||||||||| || ||||||
Sbjct: 596 aagtaaccccggatattcttcttggcatctttgttgcatctggtgaacccaacaatgttt 537

                                                                       
Query: 326 gcaaggcttagagtcaagcaaactccaacaacaagaaggtaatcagcttcaagtctaatg 385
           ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || 
Sbjct: 536 gcaaggcttagagtcaagcaaactccaacaacaagaaggtagtcagcttcaagtctgata 477

                                                                       
Query: 386 agtgaaaatatcgcaagaatgatccatgcagcagcgttcaagtaaagagtccaccagaac 445
           |||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 476 agtgaaaatatcccaagaatgatccatgcagcagcagtcaagtaaagagtccaccagaac 417

                                                                       
Query: 446 agccatgagtcttttttgttcatccgagcgagagactccccgtcgaggcactcgaacttc 505
           ||||| ||||| ||||||||||||||||| |||| |||||| ||||||||||| ||||||
Sbjct: 416 agccacgagtcctttttgttcatccgagcaagagcctccccatcgaggcactcaaacttc 357

                                                 
Query: 506 cacacactgttaccatcgtcgtcaatctcattncacca 543
           ||||| ||||| || |||||||| |||||||| |||||
Sbjct: 356 cacacgctgttgccctcgtcgtcgatctcattccacca 319
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>dbj|AK103137.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033120E14, full
           insert sequence
          Length = 1085

 Score =  379 bits (191), Expect = e-102
 Identities = 301/338 (89%)
 Strand = Plus / Minus

                                                                       
Query: 206 aatgctgactgcagggatgatgtgatgcgggatgtgatggcgttttgagcggcattttca 265
           |||||||| |||||||  |||||||||||||||||||| || ||||||||   |  ||||
Sbjct: 698 aatgctgattgcagggtggatgtgatgcgggatgtgatcgcattttgagcatgaccttca 639

                                                                       
Query: 266 gcaaaagctcggatgttcttcttggcatctttgttgcatttggtgaaccccacgatgttt 325
               || | ||||| |||||||||||||||||||||||| |||||||||| || ||||||
Sbjct: 638 aagtaaccccggatattcttcttggcatctttgttgcatctggtgaacccaacaatgttt 579

                                                                       
Query: 326 gcaaggcttagagtcaagcaaactccaacaacaagaaggtaatcagcttcaagtctaatg 385
           ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || 
Sbjct: 578 gcaaggcttagagtcaagcaaactccaacaacaagaaggtagtcagcttcaagtctgata 519

                                                                       
Query: 386 agtgaaaatatcgcaagaatgatccatgcagcagcgttcaagtaaagagtccaccagaac 445
           |||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 518 agtgaaaatatcccaagaatgatccatgcagcagcagtcaagtaaagagtccaccagaac 459

                                                                       
Query: 446 agccatgagtcttttttgttcatccgagcgagagactccccgtcgaggcactcgaacttc 505
           ||||| ||||| ||||||||||||||||| |||| |||||| ||||||||||| ||||||
Sbjct: 458 agccacgagtcctttttgttcatccgagcaagagcctccccatcgaggcactcaaacttc 399

                                                 
Query: 506 cacacactgttaccatcgtcgtcaatctcattncacca 543
           ||||| ||||| || |||||||| |||||||| |||||
Sbjct: 398 cacacgctgttgccctcgtcgtcgatctcattccacca 361
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>gb|AY105506.1| Zea mays PCO099200 mRNA sequence
          Length = 795

 Score =  299 bits (151), Expect = 5e-78
 Identities = 239/270 (88%)
 Strand = Plus / Minus

                                                                       
Query: 284 ttcttggcatctttgttgcatttggtgaaccccacgatgtttgcaaggcttagagtcaag 343
           |||||||||||||||||||| | |||||| || || |||||||||| ||||||| |||||
Sbjct: 609 ttcttggcatctttgttgcactnggtgaatccaacaatgtttgcaatgcttagantcaag 550

                                                                       
Query: 344 caaactccaacaacaagaaggtaatcagcttcaagtctaatgagtgaaaatatcgcaaga 403
           ||||||||||||||||||||||||||||| |||||  | ||||||||||||||  |||||
Sbjct: 549 caaactccaacaacaagaaggtaatcagcctcaagcntgatgagtgaaaatataccaaga 490

                                                                       
Query: 404 atgatccatgcagcagcgttcaagtaaagagtccaccagaacagccatgagtcttttttg 463
           | |||||||||||||||  ||||||||||||||||||||||||||||||| || || |||
Sbjct: 489 acgatccatgcagcagcagtcaagtaaagagtccaccagaacagccatgaatccttnttg 430

                                                                       
Query: 464 ttcatccgagcgagagactccccgtcgaggcactcgaacttccacacactgttaccatcg 523
           ||||||||||||||||||||||| || ||||| || ||||||||||||||||| || || 
Sbjct: 429 ttcatccgagcgagagactccccatcaaggcattcaaacttccacacactgtttccgtca 370

                                         
Query: 524 tcgtcaatctcattncaccaacgaagcccg 553
           || || |||||||| ||||| || ||||||
Sbjct: 369 tcatcgatctcattccaccaccgcagcccg 340
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>dbj|AK121761.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090D14, full
           insert sequence
          Length = 1086

 Score =  250 bits (126), Expect = 4e-63
 Identities = 233/269 (86%)
 Strand = Plus / Minus

                                                                       
Query: 284 ttcttggcatctttgttgcatttggtgaaccccacgatgtttgcaaggcttagagtcaag 343
           |||||||||||||||||||| |||||||| || || |||||||| | ||| ||| |||||
Sbjct: 619 ttcttggcatctttgttgcacttggtgaagccaacaatgtttgctatgctgagactcaag 560

                                                                       
Query: 344 caaactccaacaacaagaaggtaatcagcttcaagtctaatgagtgaaaatatcgcaaga 403
           ||||||||||||||||||||||||||||| | |||||| |||||||| |||||| |||||
Sbjct: 559 caaactccaacaacaagaaggtaatcagcatgaagtctgatgagtgagaatatcccaaga 500

                                                                       
Query: 404 atgatccatgcagcagcgttcaagtaaagagtccaccagaacagccatgagtcttttttg 463
           |  ||||||||||||||  ||||||| |||||||||||||||||||||||||| || |||
Sbjct: 499 acaatccatgcagcagcagtcaagtacagagtccaccagaacagccatgagtccttcttg 440

                                                                       
Query: 464 ttcatccgagcgagagactccccgtcgaggcactcgaacttccacacactgttaccatcg 523
           ||||||| ||| |||||||| || || |||||||| ||||||||||| || || || || 
Sbjct: 439 ttcatcctagcaagagactctccatcaaggcactcaaacttccacacgctattgccctca 380

                                        
Query: 524 tcgtcaatctcattncaccaacgaagccc 552
           || || |||||||| ||||| || |||||
Sbjct: 379 tcatcgatctcattccaccagcgcagccc 351
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>dbj|AK064784.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000B15, full
           insert sequence
          Length = 987

 Score =  250 bits (126), Expect = 4e-63
 Identities = 233/269 (86%)
 Strand = Plus / Minus

                                                                       
Query: 284 ttcttggcatctttgttgcatttggtgaaccccacgatgtttgcaaggcttagagtcaag 343
           |||||||||||||||||||| |||||||| || || |||||||| | ||| ||| |||||
Sbjct: 527 ttcttggcatctttgttgcacttggtgaagccaacaatgtttgctatgctgagactcaag 468

                                                                       
Query: 344 caaactccaacaacaagaaggtaatcagcttcaagtctaatgagtgaaaatatcgcaaga 403
           ||||||||||||||||||||||||||||| | |||||| |||||||| |||||| |||||
Sbjct: 467 caaactccaacaacaagaaggtaatcagcatgaagtctgatgagtgagaatatcccaaga 408

                                                                       
Query: 404 atgatccatgcagcagcgttcaagtaaagagtccaccagaacagccatgagtcttttttg 463
           |  ||||||||||||||  ||||||| |||||||||||||||||||||||||| || |||
Sbjct: 407 acaatccatgcagcagcagtcaagtacagagtccaccagaacagccatgagtccttcttg 348

                                                                       
Query: 464 ttcatccgagcgagagactccccgtcgaggcactcgaacttccacacactgttaccatcg 523
           ||||||| ||| |||||||| || || |||||||| ||||||||||| || || || || 
Sbjct: 347 ttcatcctagcaagagactctccatcaaggcactcaaacttccacacgctattgccctca 288

                                        
Query: 524 tcgtcaatctcattncaccaacgaagccc 552
           || || |||||||| ||||| || |||||
Sbjct: 287 tcatcgatctcattccaccagcgcagccc 259
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>dbj|AK060262.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-005-A04, full
           insert sequence
          Length = 876

 Score =  242 bits (122), Expect = 1e-60
 Identities = 200/226 (88%)
 Strand = Plus / Minus

                                                                       
Query: 206 aatgctgactgcagggatgatgtgatgcgggatgtgatggcgttttgagcggcattttca 265
           |||||||| |||||||  |||||||||||||||||||| || ||||||||   |  ||||
Sbjct: 226 aatgctgattgcagggtggatgtgatgcgggatgtgatcgcattttgagcatgaccttca 167

                                                                       
Query: 266 gcaaaagctcggatgttcttcttggcatctttgttgcatttggtgaaccccacgatgttt 325
               || | ||||| |||||||||||||||||||||||| |||||||||| || ||||||
Sbjct: 166 aagtaaccccggatattcttcttggcatctttgttgcatctggtgaacccaacaatgttt 107

                                                                       
Query: 326 gcaaggcttagagtcaagcaaactccaacaacaagaaggtaatcagcttcaagtctaatg 385
           ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || 
Sbjct: 106 gcaaggcttagagtcaagcaaactccaacaacaagaaggtagtcagcttcaagtctgata 47

                                                         
Query: 386 agtgaaaatatcgcaagaatgatccatgcagcagcgttcaagtaaa 431
           |||||||||||| ||||||||||||||||||||||  |||||||||
Sbjct: 46  agtgaaaatatcccaagaatgatccatgcagcagcagtcaagtaaa 1
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>gb|AC119288.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0017J22, complete sequence
          Length = 177153

 Score =  196 bits (99), Expect = 5e-47
 Identities = 120/127 (94%)
 Strand = Plus / Minus

                                                                         
Query: 294   ctttgttgcatttggtgaaccccacgatgtttgcaaggcttagagtcaagcaaactccaa 353
             ||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 60405 ctttgttgcatctggtgaacccaacaatgtttgcaaggcttagagtcaagcaaactccaa 60346

                                                                         
Query: 354   caacaagaaggtaatcagcttcaagtctaatgagtgaaaatatcgcaagaatgatccatg 413
             ||||||||||||| |||||||||||||| || |||||||||||| |||||||||||||||
Sbjct: 60345 caacaagaaggtagtcagcttcaagtctgataagtgaaaatatcccaagaatgatccatg 60286

                    
Query: 414   cagcagc 420
             |||||||
Sbjct: 60285 cagcagc 60279



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                      
Query: 423   tcaagtaaagagtccaccagaacagccatgagtcttttttgttcatccgagcgagag 479
             |||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||
Sbjct: 59329 tcaagtaaagagtccaccagaacagccacgagtcctttttgttcatccgagcaagag 59273



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                         
Query: 481   ctccccgtcgaggcactcgaacttccacacactgttaccatcgtcgtcaatctcattnca 540
             |||||| ||||||||||| ||||||||||| ||||| || |||||||| |||||||| ||
Sbjct: 59184 ctccccatcgaggcactcaaacttccacacgctgttgccctcgtcgtcgatctcattcca 59125

                
Query: 541   cca 543
             |||
Sbjct: 59124 cca 59122



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                               
Query: 206   aatgctgactgcagggatgatgtgatgcgggatgtgatggcgttttgagc 255
             |||||||| |||||||  |||||||||||||||||||| || ||||||||
Sbjct: 60989 aatgctgattgcagggtggatgtgatgcgggatgtgatcgcattttgagc 60940
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  196 bits (99), Expect = 5e-47
 Identities = 120/127 (94%)
 Strand = Plus / Minus

                                                                           
Query: 294     ctttgttgcatttggtgaaccccacgatgtttgcaaggcttagagtcaagcaaactccaa 353
               ||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 3430923 ctttgttgcatctggtgaacccaacaatgtttgcaaggcttagagtcaagcaaactccaa 3430864

                                                                           
Query: 354     caacaagaaggtaatcagcttcaagtctaatgagtgaaaatatcgcaagaatgatccatg 413
               ||||||||||||| |||||||||||||| || |||||||||||| |||||||||||||||
Sbjct: 3430863 caacaagaaggtagtcagcttcaagtctgataagtgaaaatatcccaagaatgatccatg 3430804

                      
Query: 414     cagcagc 420
               |||||||
Sbjct: 3430803 cagcagc 3430797



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                        
Query: 423     tcaagtaaagagtccaccagaacagccatgagtcttttttgttcatccgagcgagag 479
               |||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||
Sbjct: 3429847 tcaagtaaagagtccaccagaacagccacgagtcctttttgttcatccgagcaagag 3429791



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                           
Query: 481     ctccccgtcgaggcactcgaacttccacacactgttaccatcgtcgtcaatctcattnca 540
               |||||| ||||||||||| ||||||||||| ||||| || |||||||| |||||||| ||
Sbjct: 3429702 ctccccatcgaggcactcaaacttccacacgctgttgccctcgtcgtcgatctcattcca 3429643

                  
Query: 541     cca 543
               |||
Sbjct: 3429642 cca 3429640



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                 
Query: 206     aatgctgactgcagggatgatgtgatgcgggatgtgatggcgttttgagc 255
               |||||||| |||||||  |||||||||||||||||||| || ||||||||
Sbjct: 3431507 aatgctgattgcagggtggatgtgatgcgggatgtgatcgcattttgagc 3431458
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  133 bits (67), Expect = 7e-28
 Identities = 112/127 (88%)
 Strand = Plus / Minus

                                                                            
Query: 294      ctttgttgcatttggtgaaccccacgatgtttgcaaggcttagagtcaagcaaactccaa 353
                |||||||||| |||||||| || || |||||||| | ||| ||| |||||||||||||||
Sbjct: 12835152 ctttgttgcacttggtgaagccaacaatgtttgctatgctgagactcaagcaaactccaa 12835093

                                                                            
Query: 354      caacaagaaggtaatcagcttcaagtctaatgagtgaaaatatcgcaagaatgatccatg 413
                ||||||||||||||||||| | |||||| |||||||| |||||| ||||||  |||||||
Sbjct: 12835092 caacaagaaggtaatcagcatgaagtctgatgagtgagaatatcccaagaacaatccatg 12835033

                       
Query: 414      cagcagc 420
                |||||||
Sbjct: 12835032 cagcagc 12835026



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 55/60 (91%)
 Strand = Plus / Minus

                                                                            
Query: 423      tcaagtaaagagtccaccagaacagccatgagtcttttttgttcatccgagcgagagact 482
                ||||||| |||||||||||||||||||||||||| || |||||||||| ||| |||||||
Sbjct: 12832856 tcaagtacagagtccaccagaacagccatgagtccttcttgttcatcctagcaagagact 12832797
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>dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0489E06
          Length = 140229

 Score =  133 bits (67), Expect = 7e-28
 Identities = 112/127 (88%)
 Strand = Plus / Minus

                                                                          
Query: 294    ctttgttgcatttggtgaaccccacgatgtttgcaaggcttagagtcaagcaaactccaa 353
              |||||||||| |||||||| || || |||||||| | ||| ||| |||||||||||||||
Sbjct: 115551 ctttgttgcacttggtgaagccaacaatgtttgctatgctgagactcaagcaaactccaa 115492

                                                                          
Query: 354    caacaagaaggtaatcagcttcaagtctaatgagtgaaaatatcgcaagaatgatccatg 413
              ||||||||||||||||||| | |||||| |||||||| |||||| ||||||  |||||||
Sbjct: 115491 caacaagaaggtaatcagcatgaagtctgatgagtgagaatatcccaagaacaatccatg 115432

                     
Query: 414    cagcagc 420
              |||||||
Sbjct: 115431 cagcagc 115425



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 55/60 (91%)
 Strand = Plus / Minus

                                                                          
Query: 423    tcaagtaaagagtccaccagaacagccatgagtcttttttgttcatccgagcgagagact 482
              ||||||| |||||||||||||||||||||||||| || |||||||||| ||| |||||||
Sbjct: 113255 tcaagtacagagtccaccagaacagccatgagtccttcttgttcatcctagcaagagact 113196
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>ref|NM_100803.3| Arabidopsis thaliana unknown protein AT1G09330 mRNA, complete cds
          Length = 990

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 124/146 (84%), Gaps = 2/146 (1%)
 Strand = Plus / Minus

                                                                       
Query: 340 caagcaaactccaacaacaagaaggtaatcagcttcaagtctaatgagtgaaaatatcgc 399
           ||||||||| ||||||||||| || || ||||||| || |||||| || ||||||| | |
Sbjct: 614 caagcaaacgccaacaacaagcagatagtcagcttgaaatctaatcagagaaaatacccc 555

                                                                       
Query: 400 aagaatgatccatgcagcagcgttcaag-taaagagtccaccagaacagccatgagtctt 458
           ||| || | ||||||||| || | |||| ||||| ||||||||||| |||||||||||||
Sbjct: 554 aaggataaaccatgcagctgc-tgcaaggtaaagtgtccaccagaaaagccatgagtctt 496

                                     
Query: 459 ttttgttcatccgagcgagagactcc 484
           | |||||||||||||| | |||||||
Sbjct: 495 tcttgttcatccgagccaaagactcc 470
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>emb|BX818022.1|CNS0AAQD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL57ZA01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 973

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 124/146 (84%), Gaps = 2/146 (1%)
 Strand = Plus / Minus

                                                                       
Query: 340 caagcaaactccaacaacaagaaggtaatcagcttcaagtctaatgagtgaaaatatcgc 399
           ||||||||| ||||||||||| || || ||||||| || |||||| || ||||||| | |
Sbjct: 614 caagcaaacgccaacaacaagcagatagtcagcttgaaatctaatcagagaaaatacccc 555

                                                                       
Query: 400 aagaatgatccatgcagcagcgttcaag-taaagagtccaccagaacagccatgagtctt 458
           ||| || | ||||||||| || | |||| ||||| ||||||||||| |||||||||||||
Sbjct: 554 aaggataaaccatgcagctgc-tgcaaggtaaagtgtccaccagaaaagccatgagtctt 496

                                     
Query: 459 ttttgttcatccgagcgagagactcc 484
           | |||||||||||||| | |||||||
Sbjct: 495 tcttgttcatccgagccaaagactcc 470
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>gb|BT004772.1| Arabidopsis thaliana At1g09330 gene, complete cds
          Length = 561

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 124/146 (84%), Gaps = 2/146 (1%)
 Strand = Plus / Minus

                                                                       
Query: 340 caagcaaactccaacaacaagaaggtaatcagcttcaagtctaatgagtgaaaatatcgc 399
           ||||||||| ||||||||||| || || ||||||| || |||||| || ||||||| | |
Sbjct: 426 caagcaaacgccaacaacaagcagatagtcagcttgaaatctaatcagagaaaatacccc 367

                                                                       
Query: 400 aagaatgatccatgcagcagcgttcaag-taaagagtccaccagaacagccatgagtctt 458
           ||| || | ||||||||| || | |||| ||||| ||||||||||| |||||||||||||
Sbjct: 366 aaggataaaccatgcagctgc-tgcaaggtaaagtgtccaccagaaaagccatgagtctt 308

                                     
Query: 459 ttttgttcatccgagcgagagactcc 484
           | |||||||||||||| | |||||||
Sbjct: 307 tcttgttcatccgagccaaagactcc 282
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>gb|AY085379.1| Arabidopsis thaliana clone 14886 mRNA, complete sequence
          Length = 935

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 124/146 (84%), Gaps = 2/146 (1%)
 Strand = Plus / Minus

                                                                       
Query: 340 caagcaaactccaacaacaagaaggtaatcagcttcaagtctaatgagtgaaaatatcgc 399
           ||||||||| ||||||||||| || || ||||||| || |||||| || ||||||| | |
Sbjct: 584 caagcaaacgccaacaacaagcagatagtcagcttgaaatctaatcagagaaaatacccc 525

                                                                       
Query: 400 aagaatgatccatgcagcagcgttcaag-taaagagtccaccagaacagccatgagtctt 458
           ||| || | ||||||||| || | |||| ||||| ||||||||||| |||||||||||||
Sbjct: 524 aaggataaaccatgcagctgc-tgcaaggtaaagtgtccaccagaaaagccatgagtctt 466

                                     
Query: 459 ttttgttcatccgagcgagagactcc 484
           | |||||||||||||| | |||||||
Sbjct: 465 tcttgttcatccgagccaaagactcc 440
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>gb|AC006416.2|T31J12 Arabidopsis thaliana chromosome 1 BAC T31J12 sequence, complete
             sequence
          Length = 16549

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                             
Query: 427   gtaaagagtccaccagaacagccatgagtcttttttgttcatccgagc 474
             |||||| ||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 12002 gtaaagtgtccaccagaaaagccatgagtctttcttgttcatccgagc 12049



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 65/78 (83%)
 Strand = Plus / Plus

                                                                         
Query: 340   caagcaaactccaacaacaagaaggtaatcagcttcaagtctaatgagtgaaaatatcgc 399
             ||||||||| ||||||||||| || || ||||||| || |||||| || ||||||| | |
Sbjct: 11244 caagcaaacgccaacaacaagcagatagtcagcttgaaatctaatcagagaaaatacccc 11303

                               
Query: 400   aagaatgatccatgcagc 417
             ||| || | |||||||||
Sbjct: 11304 aaggataaaccatgcagc 11321
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>emb|X54689.1|TAAGCNN17 Wheat alpha-gliadin pseudogene (clone CNNE17)
          Length = 3566

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 67/78 (85%)
 Strand = Plus / Plus

                                                                        
Query: 150  ggtaacacagttgtatgtaattttgggcctctgtntaatctggacttcagatgccgaatg 209
            |||||| | |||| |||||| ||||||||||||| ||||||||||||||||  | |||||
Sbjct: 3360 ggtaaccctgttgcatgtaaatttgggcctctgtgtaatctggacttcagacactgaatg 3419

                              
Query: 210  ctgactgcagggatgatg 227
            | || | |||||||||||
Sbjct: 3420 ccgatttcagggatgatg 3437
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>emb|X54688.1|TAAGCNN35 Wheat alpha-gliadin pseudogene (clone CNN35)
          Length = 3573

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 67/78 (85%)
 Strand = Plus / Plus

                                                                        
Query: 150  ggtaacacagttgtatgtaattttgggcctctgtntaatctggacttcagatgccgaatg 209
            |||||| | |||| |||||| ||||||||||||| ||||||||||||||||  | |||||
Sbjct: 3366 ggtaaccctgttgcatgtaaatttgggcctctgtgtaatctggacttcagacactgaatg 3425

                              
Query: 210  ctgactgcagggatgatg 227
            | || | |||||||||||
Sbjct: 3426 ccgatttcagggatgatg 3443
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>emb|X54517.1|TAAGCNN16 Wheat alpha-gliadin pseudogene (clone CNN16)
          Length = 3581

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 67/78 (85%)
 Strand = Plus / Plus

                                                                        
Query: 150  ggtaacacagttgtatgtaattttgggcctctgtntaatctggacttcagatgccgaatg 209
            |||||| | |||| |||||| ||||||||||||| ||||||||||||||||  | |||||
Sbjct: 3375 ggtaaccctgttgcatgtaaatttgggcctctgtgtaatctggacttcagacactgaatg 3434

                              
Query: 210  ctgactgcagggatgatg 227
            | || | |||||||||||
Sbjct: 3435 ccgatttcagggatgatg 3452
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>gb|AC166090.23| Glycine max clone gmw1-103e11, complete sequence
          Length = 89397

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 85/103 (82%)
 Strand = Plus / Plus

                                                                         
Query: 294   ctttgttgcatttggtgaaccccacgatgtttgcaaggcttagagtcaagcaaactccaa 353
             |||| ||||||||||| || || || || ||||||| ||| || ||||  |||||||| |
Sbjct: 57169 cttttttgcatttggtaaaaccaacaatatttgcaatgctaagggtcagacaaactccta 57228

                                                        
Query: 354   caacaagaaggtaatcagcttcaagtctaatgagtgaaaatat 396
             ||||||| || |||||||||| ||| || |||||||| |||||
Sbjct: 57229 caacaaggagataatcagcttgaagccttatgagtgagaatat 57271



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                      
Query: 434   gtccaccagaacagccatgagtcttttttgttcatccgagc 474
             ||||||||||| ||||||||||| || ||||||||||||||
Sbjct: 57951 gtccaccagaaaagccatgagtccttcttgttcatccgagc 57991
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>emb|AL627104.16| Mouse DNA sequence from clone RP23-412B2 on chromosome 4, complete
              sequence
          Length = 193363

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 443    aacagccatgagtcttttttgtt 465
              |||||||||||||||||||||||
Sbjct: 135555 aacagccatgagtcttttttgtt 135533
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>emb|AL358934.19| Human DNA sequence from clone RP11-459D20 on chromosome 9 Contains a
            transcription factor IIA small 12 kDa subunit (GTF2A2)
            pseudogene, complete sequence
          Length = 95922

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 281  ttcttcttggcatctttgttg 301
            |||||||||||||||||||||
Sbjct: 5402 ttcttcttggcatctttgttg 5382
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>gb|AC108137.8| Homo sapiens chromosome 15, clone RP11-941F15, complete sequence
          Length = 177015

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 205   gaatgctgactgcagggatga 225
             |||||||||||||||||||||
Sbjct: 78740 gaatgctgactgcagggatga 78760
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>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 431     agagtccaccagaacagccat 451
               |||||||||||||||||||||
Sbjct: 3807617 agagtccaccagaacagccat 3807637
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>gb|AC002337.3| Arabidopsis thaliana chromosome 2 clone T8I13 map CIC06C03, complete
            sequence
          Length = 88068

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 335  agagtcaagcaaactccaacaacaa 359
            ||||||||||||||||||| |||||
Sbjct: 5970 agagtcaagcaaactccaataacaa 5946
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>ref|XM_217031.2| PREDICTED: Rattus norvegicus hypothetical LOC300207 (predicted)
           (LOC300207), mRNA
          Length = 435

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 434 gtccaccagaacagccatgag 454
           |||||||||||||||||||||
Sbjct: 74  gtccaccagaacagccatgag 94
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>gb|AC013486.12| Homo sapiens chromosome 15, clone RP11-2M12, complete sequence
          Length = 162060

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 205    gaatgctgactgcagggatga 225
              |||||||||||||||||||||
Sbjct: 142435 gaatgctgactgcagggatga 142415
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>emb|AL713861.10| Mouse DNA sequence from clone RP23-367H15 on chromosome X, complete
             sequence
          Length = 169838

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 139   ctttgacagaaggtaacacag 159
             |||||||||||||||||||||
Sbjct: 75831 ctttgacagaaggtaacacag 75851
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>ref|XM_522523.1| PREDICTED: Pan troglodytes similar to squamous cell carcinoma antigen
            recognized by T cells 3; tat-interacting protein of 110
            kDa (LOC467123), mRNA
          Length = 2982

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 3    ctctttagtacaggagaaag 22
            ||||||||||||||||||||
Sbjct: 2535 ctctttagtacaggagaaag 2516
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>ref|NM_014706.2| Homo sapiens squamous cell carcinoma antigen recognised by T cells 3
            (SART3), mRNA
          Length = 3776

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 3    ctctttagtacaggagaaag 22
            ||||||||||||||||||||
Sbjct: 2452 ctctttagtacaggagaaag 2433
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>gb|AC131065.16| Mus musculus chromosome 18, clone RP23-21J21, complete sequence
          Length = 208270

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 428   taaagagtccaccagaacag 447
             ||||||||||||||||||||
Sbjct: 29846 taaagagtccaccagaacag 29827
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>emb|CR381553.13| Zebrafish DNA sequence from clone CH211-154P8 in linkage group 14,
             complete sequence
          Length = 145320

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 444   acagccatgagtcttttttg 463
             ||||||||||||||||||||
Sbjct: 21941 acagccatgagtcttttttg 21960
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>emb|BX548045.6| Zebrafish DNA sequence from clone DKEY-224A6 in linkage group 17,
             complete sequence
          Length = 185946

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 444   acagccatgagtcttttttg 463
             ||||||||||||||||||||
Sbjct: 52549 acagccatgagtcttttttg 52568
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>gb|AC008119.6| Homo sapiens 12 BAC RP11-951I11 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 173153

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     ctctttagtacaggagaaag 22
             ||||||||||||||||||||
Sbjct: 73629 ctctttagtacaggagaaag 73648
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>gb|AC125453.6| Homo sapiens chromosome 8, clone RP11-1049H7, complete sequence
          Length = 186608

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   tcttcttggcatctttgttg 301
             ||||||||||||||||||||
Sbjct: 72352 tcttcttggcatctttgttg 72333
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>gb|AC127331.4| Mus musculus BAC clone RP23-127A19 from 18, complete sequence
          Length = 179177

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 428    taaagagtccaccagaacag 447
              ||||||||||||||||||||
Sbjct: 167690 taaagagtccaccagaacag 167671
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>gb|AF239614.5| Homo sapiens chromosome 8 clone RP11-410N18, complete sequence
          Length = 152042

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   tcttcttggcatctttgttg 301
             ||||||||||||||||||||
Sbjct: 79919 tcttcttggcatctttgttg 79938
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>emb|CR381700.6| Zebrafish DNA sequence from clone CH211-198F4 in linkage group 14,
             complete sequence
          Length = 203630

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 344   caaactccaacaacaagaag 363
             ||||||||||||||||||||
Sbjct: 46150 caaactccaacaacaagaag 46131
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>emb|CR407558.22| Zebrafish DNA sequence from clone CH211-107M8 in linkage group 8,
             complete sequence
          Length = 175706

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 444   acagccatgagtcttttttg 463
             ||||||||||||||||||||
Sbjct: 80743 acagccatgagtcttttttg 80724
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>emb|CR857568.1| Pongo pygmaeus mRNA; cDNA DKFZp469J2418 (from clone DKFZp469J2418)
          Length = 3812

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 3    ctctttagtacaggagaaag 22
            ||||||||||||||||||||
Sbjct: 2505 ctctttagtacaggagaaag 2486
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>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome
          Length = 5064019

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 242     atggcgttttgagcggcattttca 265
               ||||||||||||||| ||||||||
Sbjct: 2352581 atggcgttttgagcgccattttca 2352558
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>emb|CR933631.1| Homo sapiens mRNA; cDNA DKFZp686A09106 (from clone DKFZp686A09106)
          Length = 8536

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 3    ctctttagtacaggagaaag 22
            ||||||||||||||||||||
Sbjct: 7211 ctctttagtacaggagaaag 7192
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>emb|AL732622.4| Mouse DNA sequence from clone RP23-277G3 on chromosome 11 Contains part
              of the Ebf1 gene for early B-cell factor 1, complete
              sequence
          Length = 126781

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 341    aagcaaactccaacaacaag 360
              ||||||||||||||||||||
Sbjct: 108442 aagcaaactccaacaacaag 108423
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>emb|AL935187.13| Zebrafish DNA sequence from clone DKEY-97C7 in linkage group 4 Contains
             part of the gene for a novel protein similar to vertebrate
             atrophin-1 interacting protein (AIP1) and a CpG island,
             complete sequence
          Length = 263517

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 444   acagccatgagtcttttttg 463
             ||||||||||||||||||||
Sbjct: 71713 acagccatgagtcttttttg 71694
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>gb|AF387506.1| Homo sapiens KIAA0156 isoform mRNA, complete cds
          Length = 3644

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 3    ctctttagtacaggagaaag 22
            ||||||||||||||||||||
Sbjct: 2448 ctctttagtacaggagaaag 2429
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>dbj|AB073647.1| Homo sapiens primary neuroblastoma cDNA, clone:Nbla00150, full
           insert sequence
          Length = 1337

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 3   ctctttagtacaggagaaag 22
           ||||||||||||||||||||
Sbjct: 117 ctctttagtacaggagaaag 98
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>gb|AC010206.8|AC010206 Homo sapiens 12 BAC RP11-13G14 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 171523

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 3    ctctttagtacaggagaaag 22
            ||||||||||||||||||||
Sbjct: 4957 ctctttagtacaggagaaag 4938
to top
>gb|AY500483.1| Peziza bananincola voucher V. Demoulin 5529 (FH) DNA-dependent RNA
           polymerase II (RPB2) gene, partial cds
          Length = 1781

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 292 atctttgttgcatttggtga 311
           ||||||||||||||||||||
Sbjct: 148 atctttgttgcatttggtga 129
to top
>gb|AY500465.1| Amylascus tasmanicus voucher Trappe 18084 (C, dubl. OSC)
           DNA-dependent RNA polymerase II (RPB2) gene, partial cds
          Length = 1774

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 292 atctttgttgcatttggtga 311
           ||||||||||||||||||||
Sbjct: 105 atctttgttgcatttggtga 86
to top
>gb|BC093784.1| Homo sapiens squamous cell carcinoma antigen recognised by T cells 3,
            mRNA (cDNA clone MGC:120819 IMAGE:7939629), complete cds
          Length = 2943

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 3    ctctttagtacaggagaaag 22
            ||||||||||||||||||||
Sbjct: 2450 ctctttagtacaggagaaag 2431
to top
>emb|CT009716.15| Zebrafish DNA sequence from clone CH73-286H23 in linkage group 22,
             complete sequence
          Length = 120896

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 444   acagccatgagtcttttttg 463
             ||||||||||||||||||||
Sbjct: 90041 acagccatgagtcttttttg 90022
to top
>gb|BC111983.1| Homo sapiens squamous cell carcinoma antigen recognised by T cells 3,
            mRNA (cDNA clone MGC:138188 IMAGE:8327451), complete cds
          Length = 2943

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 3    ctctttagtacaggagaaag 22
            ||||||||||||||||||||
Sbjct: 2450 ctctttagtacaggagaaag 2431
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>emb|BX927173.9| Zebrafish DNA sequence from clone DKEY-236J7 in linkage group 22,
             complete sequence
          Length = 82869

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 444   acagccatgagtcttttttg 463
             ||||||||||||||||||||
Sbjct: 69034 acagccatgagtcttttttg 69015
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>emb|CT573365.4| M.truncatula DNA sequence from clone MTH2-89E15 on chromosome 3, complete
              sequence
          Length = 123679

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 457    ttttttgttcatccgagcga 476
              ||||||||||||||||||||
Sbjct: 116701 ttttttgttcatccgagcga 116720
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>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 248     ttttgagcggcattttcagcaaaa 271
               ||||||||||||||||||| ||||
Sbjct: 1681682 ttttgagcggcattttcagtaaaa 1681705
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>emb|BX927409.14| Zebrafish DNA sequence from clone DKEY-89L19 in linkage group 17,
             complete sequence
          Length = 154287

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 444   acagccatgagtcttttttg 463
             ||||||||||||||||||||
Sbjct: 65276 acagccatgagtcttttttg 65295
to top
>gb|AC090503.12| Homo sapiens 12q BAC RP11-314D7 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 221074

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   tcttcttggcatctttgttg 301
             ||||||||||||||||||||
Sbjct: 70079 tcttcttggcatctttgttg 70060
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>dbj|D63879.1| Human mRNA for KIAA0156 gene, complete cds
          Length = 3660

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 3    ctctttagtacaggagaaag 22
            ||||||||||||||||||||
Sbjct: 2445 ctctttagtacaggagaaag 2426
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>dbj|AB020880.1| Homo sapiens mRNA for squamous cell carcinoma antigen SART-3,
            complete cds
          Length = 3788

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 3    ctctttagtacaggagaaag 22
            ||||||||||||||||||||
Sbjct: 2464 ctctttagtacaggagaaag 2445


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,532,530
Number of Sequences: 3902068
Number of extensions: 4532530
Number of successful extensions: 93366
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93155
Number of HSP's gapped (non-prelim): 207
length of query: 553
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 530
effective length of database: 17,143,297,704
effective search space: 9085947783120
effective search space used: 9085947783120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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