Clone Name | rbasd22a21 |
---|---|
Clone Library Name | barley_pub |
>ZCHC7_HUMAN (Q8N3Z6) Zinc finger CCHC domain-containing protein 7| Length = 542 Score = 40.4 bits (93), Expect = 0.004 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Frame = -1 Query: 219 KPGPKQSVRLPS---AIICCSGFAQSHRCGNKCTEEEVFDGSLVKVFTCFVSTLWQI 58 KPGP + + PS A+ C AQ G++C E EV+D S V F C+ ++I Sbjct: 330 KPGPPKKPKTPSRPSALAYCYHCAQKGHYGHECPEREVYDPSPVSPFICYYDDKYEI 386
>C71C4_MAIZE (Q43257) Cytochrome P450 71C4 (EC 1.14.-.-) (Benzoxazineless 2)| Length = 538 Score = 31.2 bits (69), Expect = 2.4 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Frame = +3 Query: 375 AVDEAVEVPHVLLLQGHGVDHVVVAGEH----PQVPGLDSLQASAAERARLRPCVPVTMM 542 A+ E + PH++ V V AG+ +PG+ L+A E RL P VP+ + Sbjct: 349 AMTELIRKPHLMKKLQEEVRRNVPAGQEMVTEDNLPGMTDLKAVIKETLRLHPPVPLLLP 408 Query: 543 H 545 H Sbjct: 409 H 409
>OPLA_RAT (P97608) 5-oxoprolinase (EC 3.5.2.9) (5-oxo-L-prolinase)| (Pyroglutamase) (5-OPase) Length = 1288 Score = 30.8 bits (68), Expect = 3.2 Identities = 23/72 (31%), Positives = 29/72 (40%), Gaps = 4/72 (5%) Frame = +2 Query: 65 QSVDTKQVKTFTRDPSNTSSSVHLLPQRCDCA----KPEQQIMALGKRTDCFGPGFACQT 232 Q VD QV+ F R +T S +HL Q DCA + A R FG F + Sbjct: 557 QCVDALQVQGFPRSQISTESFLHLRYQGTDCALMVSAHQHPATACSPRAGDFGAAFVERY 616 Query: 233 XSAEDGRLPENP 268 +PE P Sbjct: 617 MREFGFIIPERP 628
>DPOL_TUHV2 (Q9YUS2) DNA polymerase (EC 2.7.7.7)| Length = 1171 Score = 30.8 bits (68), Expect = 3.2 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Frame = -1 Query: 597 FLLCSLFAANVIKPNI*YASWLQVHKVSVV--PFLPRKPEESPVQGPVGA 454 F SL+ + ++ N+ Y++WL+ + P P +P E+P GP GA Sbjct: 621 FDFASLYPSIIMAHNLCYSTWLRDDPGTPARPPETPARPPETPAAGPSGA 670
>DPOL_TUHV1 (Q9YUS3) DNA polymerase (EC 2.7.7.7)| Length = 1171 Score = 30.8 bits (68), Expect = 3.2 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Frame = -1 Query: 597 FLLCSLFAANVIKPNI*YASWLQVHKVSVV--PFLPRKPEESPVQGPVGA 454 F SL+ + ++ N+ Y++WL+ + P P +P E+P GP GA Sbjct: 621 FDFASLYPSIIMAHNLCYSTWLRDDPGTPARPPETPARPPETPAAGPSGA 670
>G3O21_WHEAT (Q3I411) Gibberellin 3-beta-dioxygenase 2-1 (EC 1.14.11.15)| (Gibberellin 3 beta-hydroxylase 2-1) (Gibberellin 3-oxidase 2-1) Length = 370 Score = 30.0 bits (66), Expect = 5.4 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = +3 Query: 411 LLQGHGVDHVVVAGEHPQVPGLDSLQASAAERARLRP 521 LL+GHGV ++AG + G+ +L AS RA RP Sbjct: 74 LLEGHGVPLELLAGVEAAIGGMFALPASEKMRAVRRP 110
>UVRA_METTH (O26543) UvrABC system protein A (UvrA protein) (Excinuclease ABC| subunit A) Length = 962 Score = 30.0 bits (66), Expect = 5.4 Identities = 18/55 (32%), Positives = 27/55 (49%) Frame = -2 Query: 530 RYTRSQSCPFCRGSLKRVQSRDLWVLTGDDDVIDPVTLEKENVRHFHSFIDSLPL 366 R+ + +CP C GS R++ L V + D V + ++R H F DSL L Sbjct: 409 RFMSNHACPVCGGS--RLRPESLSVTINGRSIHDVVEM---SIREAHEFFDSLKL 458
>SYI_AERPE (Q9YF67) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 1064 Score = 29.6 bits (65), Expect = 7.0 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%) Frame = -2 Query: 578 LLQMSSNRTSNMHHGYRYTRSQSCPFCRGSLKRVQS-RDLWVLTG 447 L M R N+H + CP C GS+KRV D+W +G Sbjct: 491 LESMGGRRPENLHRPWVDRVELKCPRCGGSMKRVPDVLDVWFDSG 535
>RN152_MOUSE (Q8BG47) RING finger protein 152| Length = 203 Score = 29.3 bits (64), Expect = 9.2 Identities = 18/59 (30%), Positives = 27/59 (45%) Frame = -2 Query: 593 CCALCLLQMSSNRTSNMHHGYRYTRSQSCPFCRGSLKRVQSRDLWVLTGDDDVIDPVTL 417 CC++CL QM RTS + CP+CRG K + L D +V+ + + Sbjct: 34 CCSVCLQQM---RTSQ--------KDVRCPWCRGITKLPPGFSVSQLPDDPEVLAVIAI 81
>RN152_HUMAN (Q8N8N0) RING finger protein 152| Length = 203 Score = 29.3 bits (64), Expect = 9.2 Identities = 18/59 (30%), Positives = 27/59 (45%) Frame = -2 Query: 593 CCALCLLQMSSNRTSNMHHGYRYTRSQSCPFCRGSLKRVQSRDLWVLTGDDDVIDPVTL 417 CC++CL QM RTS + CP+CRG K + L D +V+ + + Sbjct: 34 CCSVCLQQM---RTSQ--------KDVRCPWCRGVTKLPPGFSVSQLPDDPEVLAVIAI 81 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,448,087 Number of Sequences: 219361 Number of extensions: 1434765 Number of successful extensions: 4579 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 4475 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4577 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5310515667 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)