ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd21l19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY681974.1| Hordeum vulgare subsp. vulgare dehydrin 13 (Dhn13) gene, complete cds Length = 2174 Score = 280 bits (141), Expect = 1e-72 Identities = 152/157 (96%) Strand = Plus / Minus Query: 1 cgactcctgaacgttattattacaagcaccgtgcagtgcagtgcagcgcagcgcagccca 60 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1920 cgactcctcaacgttattattacaagcaccgtgcagtgcagtgcagcgcagcgcagccca 1861 Query: 61 gccggttattacatnacaagatccatgagacatgtngngcattacatacatatgctacca 120 |||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 1860 gccggttattacatcacaagatccatgagacatgtcgcgcattacatacatatgctacca 1801 Query: 121 cacgctccaaattaacccaagccttccatctcgnctg 157 ||||||||||||||||||||||||||||||||| ||| Sbjct: 1800 cacgctccaaattaacccaagccttccatctcgcctg 1764
>gb|U73215.1|TAU73215 Triticum aestivum cold acclimation protein WCOR825 (Wcor825) mRNA, partial cds Length = 437 Score = 97.6 bits (49), Expect = 1e-17 Identities = 58/62 (93%) Strand = Plus / Minus Query: 70 tacatnacaagatccatgagacatgtngngcattacatacatatgctaccacacgctcca 129 ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 378 tacatcacaagatccatgagacatgtcacgcattacatacatatgctaccacacgctcca 319 Query: 130 aa 131 || Sbjct: 318 aa 317 Score = 75.8 bits (38), Expect = 4e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 10 aacgttattattacaagcaccgtgcagtgcagtgcagc 47 |||||||||||||||||||||||||||||||||||||| Sbjct: 429 aacgttattattacaagcaccgtgcagtgcagtgcagc 392
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 52.0 bits (26), Expect = 6e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 30 cgtgcagtgcagtgcagcgcagcgca 55 |||||||||||||||||||||||||| Sbjct: 22576120 cgtgcagtgcagtgcagcgcagcgca 22576145
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 52.0 bits (26), Expect = 6e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 30 cgtgcagtgcagtgcagcgcagcgca 55 |||||||||||||||||||||||||| Sbjct: 22504468 cgtgcagtgcagtgcagcgcagcgca 22504493
>emb|AL954871.5|CNS08CDA Oryza sativa chromosome 12, . BAC OSJNBb0085B24 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131441 Score = 52.0 bits (26), Expect = 6e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 30 cgtgcagtgcagtgcagcgcagcgca 55 |||||||||||||||||||||||||| Sbjct: 78699 cgtgcagtgcagtgcagcgcagcgca 78724
>emb|AL845342.2|CNS08CB4 Oryza sativa chromosome 12, . BAC OSJNBa0027H05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 138368 Score = 52.0 bits (26), Expect = 6e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 30 cgtgcagtgcagtgcagcgcagcgca 55 |||||||||||||||||||||||||| Sbjct: 21397 cgtgcagtgcagtgcagcgcagcgca 21422
>emb|AL662987.3|OSJN00188 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088A01, complete sequence Length = 186325 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Plus Query: 33 gcagtgcagtgcagcgcagcgcagc 57 ||||||||||||||||||||||||| Sbjct: 47506 gcagtgcagtgcagcgcagcgcagc 47530 Score = 42.1 bits (21), Expect = 0.53 Identities = 24/25 (96%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgcagcgca 55 ||||||||||| ||||||||||||| Sbjct: 47509 gtgcagtgcagcgcagcgcagcgca 47533
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Plus Query: 33 gcagtgcagtgcagcgcagcgcagc 57 ||||||||||||||||||||||||| Sbjct: 29374490 gcagtgcagtgcagcgcagcgcagc 29374514 Score = 42.1 bits (21), Expect = 0.53 Identities = 24/25 (96%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgcagcgca 55 ||||||||||| ||||||||||||| Sbjct: 29374493 gtgcagtgcagcgcagcgcagcgca 29374517 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 caccgtgcagtgcagtgcag 46 |||||||||||||||||||| Sbjct: 23093010 caccgtgcagtgcagtgcag 23093029 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ccgtgcagtgcagtgcagcg 48 |||||||||||||||||||| Sbjct: 19214963 ccgtgcagtgcagtgcagcg 19214982 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 gcgcagcgcagcccagccgg 65 |||||||||||||||||||| Sbjct: 7878965 gcgcagcgcagcccagccgg 7878946 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgc 49 ||||||||||||||||||| Sbjct: 34694222 gtgcagtgcagtgcagcgc 34694240 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 32 tgcagtgcagtgcagcgcagcgc 54 ||||||||||||||| ||||||| Sbjct: 34694218 tgcagtgcagtgcagtgcagcgc 34694240
>gb|AC136743.5| Mus musculus chromosome 9, clone RP23-149D5, complete sequence Length = 213343 Score = 46.1 bits (23), Expect = 0.034 Identities = 23/23 (100%) Strand = Plus / Minus Query: 30 cgtgcagtgcagtgcagcgcagc 52 ||||||||||||||||||||||| Sbjct: 120582 cgtgcagtgcagtgcagcgcagc 120560 Score = 42.1 bits (21), Expect = 0.53 Identities = 27/29 (93%) Strand = Plus / Minus Query: 36 gtgcagtgcagcgcagcgcagcccagccg 64 ||||||||||| |||||||||||| |||| Sbjct: 120581 gtgcagtgcagtgcagcgcagccctgccg 120553
>gb|DQ402463.1| Coturnix japonica rhodopsin visual pigment (RHO) gene, intron 1 Length = 827 Score = 46.1 bits (23), Expect = 0.034 Identities = 26/27 (96%) Strand = Plus / Plus Query: 30 cgtgcagtgcagtgcagcgcagcgcag 56 |||||||||||||||||||||| |||| Sbjct: 366 cgtgcagtgcagtgcagcgcagtgcag 392
>gb|AY952756.1| Coturnix japonica rhodopsin (RDP1) gene, intron 1 Length = 827 Score = 46.1 bits (23), Expect = 0.034 Identities = 26/27 (96%) Strand = Plus / Plus Query: 30 cgtgcagtgcagtgcagcgcagcgcag 56 |||||||||||||||||||||| |||| Sbjct: 366 cgtgcagtgcagtgcagcgcagtgcag 392
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.034 Identities = 26/27 (96%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgcagcgcagc 57 |||||| |||||||||||||||||||| Sbjct: 28913291 gtgcagggcagtgcagcgcagcgcagc 28913317 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cgtgcagtgcagtgcagcgca 50 ||||||||||||||||||||| Sbjct: 40254733 cgtgcagtgcagtgcagcgca 40254713 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgcag 51 ||||||||||||||||||||| Sbjct: 5120591 gtgcagtgcagtgcagcgcag 5120611 Score = 42.1 bits (21), Expect = 0.53 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 tgcagtgcagtgcagcgcagcgcag 56 ||||||||||||||| ||||||||| Sbjct: 5120587 tgcagtgcagtgcagtgcagcgcag 5120611 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgca 50 |||||||||||||||||||| Sbjct: 29197218 gtgcagtgcagtgcagcgca 29197237 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgcagcg 53 |||||||||||||||| |||||| Sbjct: 8916819 gtgcagtgcagtgcagtgcagcg 8916841
>dbj|AP003254.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0454A11 Length = 152240 Score = 46.1 bits (23), Expect = 0.034 Identities = 26/27 (96%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgcagcgcagc 57 |||||| |||||||||||||||||||| Sbjct: 25914 gtgcagggcagtgcagcgcagcgcagc 25940
>gb|AY791899.1| Taenia saginata 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 711 Score = 44.1 bits (22), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgcagcgcag 56 ||||||||||||||||||||| |||| Sbjct: 522 gtgcagtgcagtgcagcgcagtgcag 547 Score = 44.1 bits (22), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgcagcgcag 56 |||||||||||||||| ||||||||| Sbjct: 517 gtgcagtgcagtgcagtgcagcgcag 542
>gb|AC118676.6| Mus musculus chromosome 7, clone RP24-178N18, complete sequence Length = 149930 Score = 44.1 bits (22), Expect = 0.13 Identities = 22/22 (100%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgcagc 52 |||||||||||||||||||||| Sbjct: 123623 gtgcagtgcagtgcagcgcagc 123644
>gb|AC140315.3| Mus musculus BAC clone RP23-396I19 from chromosome 3, complete sequence Length = 205029 Score = 44.1 bits (22), Expect = 0.13 Identities = 28/30 (93%) Strand = Plus / Plus Query: 33 gcagtgcagtgcagcgcagcgcagcccagc 62 ||||||||||||||| ||||||||| |||| Sbjct: 105247 gcagtgcagtgcagcacagcgcagcgcagc 105276 Score = 40.1 bits (20), Expect = 2.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgcagcgcagcccagc 62 ||||||||||| |||||||||||||| |||| Sbjct: 105250 gtgcagtgcagcacagcgcagcgcagcgcagc 105281
>gb|AC163282.3| Mus musculus BAC clone RP23-454I20 from chromosome 12, complete sequence Length = 202583 Score = 44.1 bits (22), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Minus Query: 38 gcagtgcagcgcagcgcagcccagcc 63 |||| ||||||||||||||||||||| Sbjct: 160606 gcagcgcagcgcagcgcagcccagcc 160581
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.13 Identities = 22/22 (100%) Strand = Plus / Plus Query: 30 cgtgcagtgcagtgcagcgcag 51 |||||||||||||||||||||| Sbjct: 3595356 cgtgcagtgcagtgcagcgcag 3595377
>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0577B11 Length = 180355 Score = 44.1 bits (22), Expect = 0.13 Identities = 22/22 (100%) Strand = Plus / Plus Query: 30 cgtgcagtgcagtgcagcgcag 51 |||||||||||||||||||||| Sbjct: 73862 cgtgcagtgcagtgcagcgcag 73883
>gb|AC107371.17| Mus musculus chromosome 7, clone RP24-66D2, complete sequence Length = 214373 Score = 44.1 bits (22), Expect = 0.13 Identities = 22/22 (100%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgcagc 52 |||||||||||||||||||||| Sbjct: 64999 gtgcagtgcagtgcagcgcagc 65020
>emb|CT030161.10| Mouse DNA sequence from clone RP23-235H10 on chromosome 12, complete sequence Length = 234471 Score = 44.1 bits (22), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Plus Query: 38 gcagtgcagcgcagcgcagcccagcc 63 |||| ||||||||||||||||||||| Sbjct: 219240 gcagcgcagcgcagcgcagcccagcc 219265
>gb|AC134594.5| Mus musculus BAC clone RP23-388B6 from 12, complete sequence Length = 194521 Score = 44.1 bits (22), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Plus Query: 38 gcagtgcagcgcagcgcagcccagcc 63 |||| ||||||||||||||||||||| Sbjct: 173314 gcagcgcagcgcagcgcagcccagcc 173339
>emb|AL671672.4| Mouse DNA sequence from clone RP23-461E2 on chromosome 4, complete sequence Length = 191255 Score = 44.1 bits (22), Expect = 0.13 Identities = 28/30 (93%) Strand = Plus / Plus Query: 33 gcagtgcagtgcagcgcagcgcagcccagc 62 |||| |||| |||||||||||||||||||| Sbjct: 174592 gcagcgcagcgcagcgcagcgcagcccagc 174621
>ref|NM_188231.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 330 Score = 42.1 bits (21), Expect = 0.53 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 tgcagtgcagtgcagcgcagcgcag 56 ||||||||||||||| ||||||||| Sbjct: 66 tgcagtgcagtgcagtgcagcgcag 42 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 gtgcagtgcagtgcagcgcag 51 ||||||||||||||||||||| Sbjct: 62 gtgcagtgcagtgcagcgcag 42
>gb|AC129574.8| Mus musculus chromosome 16, clone RP23-78C2, complete sequence Length = 214649 Score = 42.1 bits (21), Expect = 0.53 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 cagtgcagtgcagcgcagcgcagcc 58 |||||||||||||| |||||||||| Sbjct: 142169 cagtgcagtgcagcccagcgcagcc 142193
>ref|XM_977769.1| PREDICTED: Mus musculus hypothetical protein LOC674876 (LOC674876), mRNA Length = 354 Score = 42.1 bits (21), Expect = 0.53 Identities = 27/29 (93%) Strand = Plus / Plus Query: 38 gcagtgcagcgcagcgcagcccagccggt 66 |||| ||||||||||||||| |||||||| Sbjct: 173 gcagcgcagcgcagcgcagcgcagccggt 201
>gb|AC113301.7| Mus musculus chromosome 8, clone RP23-430G7, complete sequence Length = 195985 Score = 42.1 bits (21), Expect = 0.53 Identities = 24/25 (96%) Strand = Plus / Minus Query: 38 gcagtgcagcgcagcgcagcccagc 62 |||||||||||||||||||| |||| Sbjct: 11718 gcagtgcagcgcagcgcagcgcagc 11694 Score = 42.1 bits (21), Expect = 0.53 Identities = 24/25 (96%) Strand = Plus / Minus Query: 33 gcagtgcagtgcagcgcagcgcagc 57 ||||||||| ||||||||||||||| Sbjct: 11718 gcagtgcagcgcagcgcagcgcagc 11694
>gb|AC010026.7| Drosophila melanogaster 3L BAC RP98-1I24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179776 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 tgcagtgcagcgcagcgcagc 57 ||||||||||||||||||||| Sbjct: 112840 tgcagtgcagcgcagcgcagc 112860
>dbj|AP003707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1485_B09 Length = 66599 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cgtgcagtgcagtgcagcgca 50 ||||||||||||||||||||| Sbjct: 53685 cgtgcagtgcagtgcagcgca 53665
>gb|AY952757.1| Gallus gallus rhodopsin (RDP1) gene, intron 1 Length = 834 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 tgcagcgcagcgcagcccagc 62 ||||||||||||||||||||| Sbjct: 349 tgcagcgcagcgcagcccagc 369
>gb|AC154224.1| Mus musculus BAC clone RP24-141J15 from chromosome 13, complete sequence Length = 146998 Score = 42.1 bits (21), Expect = 0.53 Identities = 27/29 (93%) Strand = Plus / Minus Query: 38 gcagtgcagcgcagcgcagcccagccggt 66 |||| ||||||||||||||| |||||||| Sbjct: 45407 gcagcgcagcgcagcgcagcgcagccggt 45379
>dbj|AP002537.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0001B06 Length = 140304 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgcag 51 ||||||||||||||||||||| Sbjct: 114029 gtgcagtgcagtgcagcgcag 114049 Score = 42.1 bits (21), Expect = 0.53 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 tgcagtgcagtgcagcgcagcgcag 56 ||||||||||||||| ||||||||| Sbjct: 114025 tgcagtgcagtgcagtgcagcgcag 114049
>dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1793G04 Length = 156714 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cgtgcagtgcagtgcagcgca 50 ||||||||||||||||||||| Sbjct: 120511 cgtgcagtgcagtgcagcgca 120491
>dbj|AP003417.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0498B01 Length = 146812 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgcag 51 ||||||||||||||||||||| Sbjct: 52622 gtgcagtgcagtgcagcgcag 52642 Score = 42.1 bits (21), Expect = 0.53 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 tgcagtgcagtgcagcgcagcgcag 56 ||||||||||||||| ||||||||| Sbjct: 52618 tgcagtgcagtgcagtgcagcgcag 52642
>dbj|AP006165.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1425D05, complete sequence Length = 66450 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cgtgcagtgcagtgcagcgca 50 ||||||||||||||||||||| Sbjct: 46083 cgtgcagtgcagtgcagcgca 46063
>gb|AE003468.3| Drosophila melanogaster chromosome 3L, section 2 of 83 of the complete sequence Length = 307657 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 tgcagtgcagcgcagcgcagc 57 ||||||||||||||||||||| Sbjct: 129483 tgcagtgcagcgcagcgcagc 129463
>dbj|D00702.1|CHKRDPSN Gallus gallus gene for rhodopsin, complete cds Length = 4285 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 tgcagcgcagcgcagcccagc 62 ||||||||||||||||||||| Sbjct: 1401 tgcagcgcagcgcagcccagc 1421
>gb|AC122435.5| Mus musculus BAC clone RP24-199D4 from 8, complete sequence Length = 161717 Score = 42.1 bits (21), Expect = 0.53 Identities = 24/25 (96%) Strand = Plus / Plus Query: 38 gcagtgcagcgcagcgcagcccagc 62 |||||||||||||||||||| |||| Sbjct: 71413 gcagtgcagcgcagcgcagcgcagc 71437 Score = 42.1 bits (21), Expect = 0.53 Identities = 24/25 (96%) Strand = Plus / Plus Query: 33 gcagtgcagtgcagcgcagcgcagc 57 ||||||||| ||||||||||||||| Sbjct: 71413 gcagtgcagcgcagcgcagcgcagc 71437
>emb|AL772358.6| Mouse DNA sequence from clone RP23-397K2 on chromosome 4, complete sequence Length = 173518 Score = 42.1 bits (21), Expect = 0.53 Identities = 24/25 (96%) Strand = Plus / Minus Query: 38 gcagtgcagcgcagcgcagcccagc 62 |||||||||||||||||||| |||| Sbjct: 69423 gcagtgcagcgcagcgcagcacagc 69399 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 44 cagcgcagcgcagcccagc 62 ||||||||||||||||||| Sbjct: 69681 cagcgcagcgcagcccagc 69663
>gb|AC102908.11| Mus musculus chromosome 16, clone RP24-288K2, complete sequence Length = 174803 Score = 40.1 bits (20), Expect = 2.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 31 gtgcagtgcagtgcagcgcagcgcagcc 58 |||||||||||||||| |||| |||||| Sbjct: 24507 gtgcagtgcagtgcagtgcagtgcagcc 24480
>gb|BC023016.1| Mus musculus DENN/MADD domain containing 1A, mRNA (cDNA clone IMAGE:5363934), complete cds Length = 2417 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 gcagtgcagtgcagcgcagc 52 |||||||||||||||||||| Sbjct: 195 gcagtgcagtgcagcgcagc 214
>gb|BC027786.1| Mus musculus DENN/MADD domain containing 1A, mRNA (cDNA clone MGC:38416 IMAGE:5346095), complete cds Length = 4331 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 gcagtgcagtgcagcgcagc 52 |||||||||||||||||||| Sbjct: 158 gcagtgcagtgcagcgcagc 177
>gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0028C22, complete sequence Length = 154228 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 cgtgcagtgcagtgcagcgcagcg 53 |||||||||||||||||| ||||| Sbjct: 63925 cgtgcagtgcagtgcagcccagcg 63902
>ref|NM_181404.5| Mus musculus ankyrin repeat domain 15 (Ankrd15), mRNA Length = 5425 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgcagcgc 54 |||||||||||||||| ||||||| Sbjct: 72 gtgcagtgcagtgcagtgcagcgc 95
>gb|BC006073.1| Mus musculus RIKEN cDNA 1110059H15 gene, mRNA (cDNA clone IMAGE:3593347) Length = 2469 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgca 50 |||||||||||||||||||| Sbjct: 741 gtgcagtgcagtgcagcgca 760
>ref|XM_992989.1| PREDICTED: Mus musculus RIKEN cDNA 1110059H15 gene (1110059H15Rik), mRNA Length = 5858 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgca 50 |||||||||||||||||||| Sbjct: 3560 gtgcagtgcagtgcagcgca 3579
>ref|XM_990935.1| PREDICTED: Mus musculus RIKEN cDNA 1110059H15 gene (1110059H15Rik), mRNA Length = 5757 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgca 50 |||||||||||||||||||| Sbjct: 3459 gtgcagtgcagtgcagcgca 3478
>ref|XM_981951.1| PREDICTED: Mus musculus RIKEN cDNA 1110059H15 gene (1110059H15Rik), mRNA Length = 5757 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgca 50 |||||||||||||||||||| Sbjct: 3459 gtgcagtgcagtgcagcgca 3478
>ref|XM_749785.1| Aspergillus fumigatus Af293 ABC multidrug transporter (Afu3g07300) partial mRNA Length = 4419 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 ccgtgcagtgcagtgcagcgcagc 52 |||||||||| ||||||||||||| Sbjct: 4086 ccgtgcagtgaagtgcagcgcagc 4109
>gb|AC132319.3| Mus musculus BAC clone RP24-258I12 from chromosome 19, complete sequence Length = 193053 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 gtgcagtgcagtgcagcgcagcgc 54 |||||||||||||||| ||||||| Sbjct: 102504 gtgcagtgcagtgcagtgcagcgc 102481
>gb|AC121924.3| Mus musculus BAC clone RP24-198P16 from chromosome 2, complete sequence Length = 177062 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 gtgcagtgcagtgcagcgca 50 |||||||||||||||||||| Sbjct: 71864 gtgcagtgcagtgcagcgca 71845
>gb|AY158087.1| Bos taurus immunoglobulin heavy chain (IGH) gene, partial sequence Length = 8259 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 cagtgcagcgcagcgcagcccagc 62 ||||||||| |||||||||||||| Sbjct: 4810 cagtgcagctcagcgcagcccagc 4787
>emb|BX842605.1|OSJN00299 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1358B12, complete sequence Length = 131246 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 caccgtgcagtgcagtgcag 46 |||||||||||||||||||| Sbjct: 89350 caccgtgcagtgcagtgcag 89369
>emb|AL662948.4|OSJN00150 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060B20, complete sequence Length = 147254 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 gcgcagcgcagcccagccgg 65 |||||||||||||||||||| Sbjct: 84662 gcgcagcgcagcccagccgg 84643
>dbj|AK220407.1| Mus musculus premature mRNA for mKIAA1608 protein Length = 4095 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 gcagtgcagtgcagcgcagc 52 |||||||||||||||||||| Sbjct: 113 gcagtgcagtgcagcgcagc 132
>dbj|AK159156.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420005M01 product:hypothetical protein, full insert sequence Length = 1707 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 gcagtgcagtgcagcgcagc 52 |||||||||||||||||||| Sbjct: 26 gcagtgcagtgcagcgcagc 45
>dbj|AK137530.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830132A21 product:hypothetical dDENN domain/DENN (AEX-3) domain/uDENN domain/Proline-rich region profile containing protein, full insert sequence Length = 4287 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 gcagtgcagtgcagcgcagc 52 |||||||||||||||||||| Sbjct: 173 gcagtgcagtgcagcgcagc 192
>gb|AY179883.1| Zea mays cultivar W22 floricaula/leafy-like 1 (fl1) gene, partial cds Length = 2816 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 ccgtgcagtgcagtgcagcgcagc 52 |||||||||||||||||| ||||| Sbjct: 2265 ccgtgcagtgcagtgcagagcagc 2242
>dbj|AK050359.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730040M14 product:hypothetical Cysteine-rich region containing protein, full insert sequence Length = 3773 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgca 50 |||||||||||||||||||| Sbjct: 2060 gtgcagtgcagtgcagcgca 2079
>dbj|AK076522.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4833438M21 product:unclassifiable, full insert sequence Length = 2309 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgca 50 |||||||||||||||||||| Sbjct: 863 gtgcagtgcagtgcagcgca 882
>dbj|AK004314.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110059H15 product:hypothetical protein, full insert sequence Length = 1836 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgca 50 |||||||||||||||||||| Sbjct: 1587 gtgcagtgcagtgcagcgca 1606
>dbj|AK020911.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930031B09 product:unclassifiable, full insert sequence Length = 797 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgcagcgc 54 |||||||||||||||| ||||||| Sbjct: 300 gtgcagtgcagtgcagtgcagcgc 323
>dbj|AK041011.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530060J16 product:hypothetical protein, full insert sequence Length = 1297 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgcagcgc 54 |||||||||||||||| ||||||| Sbjct: 72 gtgcagtgcagtgcagtgcagcgc 95
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 cgtgcagtgcagtgcagcgcagcg 53 |||||||||||||||||| ||||| Sbjct: 19736658 cgtgcagtgcagtgcagcccagcg 19736635
>gb|AC078863.15|AC078863 Mus musculus BAC RP23-406N7 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 188008 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 gcagtgcagtgcagcgcagc 52 |||||||||||||||||||| Sbjct: 90685 gcagtgcagtgcagcgcagc 90704
>gb|AC119914.10| Mus musculus chromosome 15, clone RP24-244H15, complete sequence Length = 213223 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 caccgtgcagtgcagtgcag 46 |||||||||||||||||||| Sbjct: 158542 caccgtgcagtgcagtgcag 158561
>dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0421H07 Length = 158126 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgca 50 |||||||||||||||||||| Sbjct: 157584 gtgcagtgcagtgcagcgca 157603
>dbj|AP003023.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684B02 Length = 132470 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgca 50 |||||||||||||||||||| Sbjct: 43005 gtgcagtgcagtgcagcgca 43024
>dbj|AK173334.1| Mus musculus mRNA for mKIAA2024 protein Length = 5392 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgca 50 |||||||||||||||||||| Sbjct: 3679 gtgcagtgcagtgcagcgca 3698
>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0450E05 Length = 176553 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 cgtgcagtgcagtgcagcgcagcg 53 |||||||||||||||||| ||||| Sbjct: 82344 cgtgcagtgcagtgcagcccagcg 82321
>dbj|AK110349.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-164-H03, full insert sequence Length = 2694 Score = 40.1 bits (20), Expect = 2.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 29 ccgtgcagtgcagtgcagcgcagcgcag 56 |||||||||||||||||| |||| |||| Sbjct: 2540 ccgtgcagtgcagtgcagtgcagtgcag 2513
>dbj|AK062873.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-C09, full insert sequence Length = 771 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 gcgcagcgcagcccagccgg 65 |||||||||||||||||||| Sbjct: 61 gcgcagcgcagcccagccgg 42
>emb|AL512547.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0812A04, complete sequence Length = 43144 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 caccgtgcagtgcagtgcag 46 |||||||||||||||||||| Sbjct: 13945 caccgtgcagtgcagtgcag 13964
>gb|AC131299.11| Mus musculus chromosome 15, clone RP23-335O2, complete sequence Length = 215708 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 caccgtgcagtgcagtgcag 46 |||||||||||||||||||| Sbjct: 133467 caccgtgcagtgcagtgcag 133448
>emb|AL929249.15| Mouse DNA sequence from clone RP23-273G23 on chromosome 2, complete sequence Length = 194209 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgca 50 |||||||||||||||||||| Sbjct: 156794 gtgcagtgcagtgcagcgca 156813
>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21, complete sequence Length = 151936 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ccgtgcagtgcagtgcagcg 48 |||||||||||||||||||| Sbjct: 148485 ccgtgcagtgcagtgcagcg 148504
>ref|NM_146122.2| Mus musculus DENN/MADD domain containing 1A (Dennd1a), mRNA Length = 4331 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 gcagtgcagtgcagcgcagc 52 |||||||||||||||||||| Sbjct: 158 gcagtgcagtgcagcgcagc 177
>emb|AL929186.7| Mouse DNA sequence from clone RP23-399K8 on chromosome 2, complete sequence Length = 198573 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 gcagtgcagtgcagcgcagc 52 |||||||||||||||||||| Sbjct: 116564 gcagtgcagtgcagcgcagc 116545
>gb|AC119205.8| Mus musculus chromosome 5, clone RP24-188M1, complete sequence Length = 170550 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 38 gcagtgcagcgcagcgcag 56 ||||||||||||||||||| Sbjct: 134033 gcagtgcagcgcagcgcag 134051
>ref|XM_519998.1| PREDICTED: Pan troglodytes similar to The KIAA0150 gene product is novel. (LOC464443), mRNA Length = 11427 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 39 cagtgcagcgcagcgcagc 57 ||||||||||||||||||| Sbjct: 3156 cagtgcagcgcagcgcagc 3174
>gb|AC161510.10| Mus musculus chromosome 5, clone RP23-7M16, complete sequence Length = 195579 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 45 agcgcagcgcagcccagcc 63 ||||||||||||||||||| Sbjct: 171815 agcgcagcgcagcccagcc 171797
>ref|XM_656549.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4037.2), mRNA Length = 3783 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 48 gcagcgcagcccagccggt 66 ||||||||||||||||||| Sbjct: 3528 gcagcgcagcccagccggt 3546
>gb|AC157994.2| Mus musculus BAC clone RP24-349B6 from chromosome 9, complete sequence Length = 226187 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 41 gtgcagcgcagcgcagccc 59 ||||||||||||||||||| Sbjct: 41324 gtgcagcgcagcgcagccc 41306
>gb|DQ483994.1| Gymnogyps californianus clone 160G microsatellite sequence Length = 1289 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 33 gcagtgcagtgcagcgcagcgca 55 |||| |||||||||||||||||| Sbjct: 340 gcagcgcagtgcagcgcagcgca 362
>gb|AC123057.4| Mus musculus BAC clone RP23-184N6 from 3, complete sequence Length = 223068 Score = 38.2 bits (19), Expect = 8.3 Identities = 25/27 (92%) Strand = Plus / Minus Query: 37 tgcagtgcagcgcagcgcagcccagcc 63 |||||||||||||||| |||| ||||| Sbjct: 2890 tgcagtgcagcgcagcccagctcagcc 2864
>gb|AC084383.1| Mus musculus BAC clone RP23-10B20 from 17, complete sequence Length = 203589 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 39 cagtgcagcgcagcgcagc 57 ||||||||||||||||||| Sbjct: 96839 cagtgcagcgcagcgcagc 96857
>gb|AC119803.10| Mus musculus chromosome 6, clone RP23-124H21, complete sequence Length = 197762 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 34 cagtgcagtgcagcgcagc 52 ||||||||||||||||||| Sbjct: 22577 cagtgcagtgcagcgcagc 22559
>emb|AL031727.43|HS1056L3 Human DNA sequence from clone RP5-1056L3 on chromosome 1p35.1-36.13 Contains a novel gene, the gene for a novel protein (LOC374960), a ribosomal protein S14 (RPS14) pseudogene, the NBL1 gene for neuroblastoma suppression of tumorigenicity 1, the HTR6 gene for 5-hydroxytryptamine (serotonin) receptor 6, the 3' end of the gene for a novel protein (LOC255104) (FLJ45636) and two CpG islands, complete sequence Length = 163848 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 46 gcgcagcgcagcccagccg 64 ||||||||||||||||||| Sbjct: 72724 gcgcagcgcagcccagccg 72742
>emb|AL606668.2|OSJN00083 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064G10, complete sequence Length = 150206 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgc 49 ||||||||||||||||||| Sbjct: 148343 gtgcagtgcagtgcagcgc 148361 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 32 tgcagtgcagtgcagcgcagcgc 54 ||||||||||||||| ||||||| Sbjct: 148339 tgcagtgcagtgcagtgcagcgc 148361
>emb|AJ720346.1| Gallus gallus mRNA for hypothetical protein, clone 15m17 Length = 2066 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 39 cagtgcagcgcagcgcagcccag 61 ||||||||| ||||||||||||| Sbjct: 62 cagtgcagcccagcgcagcccag 84
>gb|AC067930.7| Homo sapiens chromosome 8, clone RP11-661A12, complete sequence Length = 174906 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 39 cagtgcagcgcagcgcagc 57 ||||||||||||||||||| Sbjct: 62886 cagtgcagcgcagcgcagc 62868
>dbj|D89013.1| Homo sapiens DAN gene, complete cds Length = 19874 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 46 gcgcagcgcagcccagccg 64 ||||||||||||||||||| Sbjct: 2395 gcgcagcgcagcccagccg 2413
>gb|AY952758.1| Meleagris gallopavo rhodopsin (RDP1) gene, intron 1 Length = 847 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 30 cgtgcagtgcagtgcagcgcagc 52 |||||||||||||||||| |||| Sbjct: 367 cgtgcagtgcagtgcagcccagc 389
>dbj|AK050469.1| Mus musculus adult pancreas islet cells cDNA, RIKEN full-length enriched library, clone:C820001L23 product:muscle and microspikes RAS, full insert sequence Length = 1780 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 41 gtgcagcgcagcgcagccc 59 ||||||||||||||||||| Sbjct: 66 gtgcagcgcagcgcagccc 48
>gb|AC007820.5|AC007820 Drosophila melanogaster, chromosome 3R, region 99F-99F, BAC clone BACR12J15, complete sequence Length = 198734 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 gcagcgcagcgcagcccag 61 ||||||||||||||||||| Sbjct: 121087 gcagcgcagcgcagcccag 121069
>gb|AC084208.5| Homo sapiens BAC clone RP11-228P15 from 2, complete sequence Length = 141130 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgc 49 ||||||||||||||||||| Sbjct: 16680 gtgcagtgcagtgcagcgc 16698
>dbj|AP001383.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0453A06 Length = 154378 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgcagcg 53 |||||||||||||||| |||||| Sbjct: 24574 gtgcagtgcagtgcagtgcagcg 24596
>emb|AL844579.10| Mouse DNA sequence from clone RP23-219M22 on chromosome 2, complete sequence Length = 103290 Score = 38.2 bits (19), Expect = 8.3 Identities = 25/27 (92%) Strand = Plus / Minus Query: 31 gtgcagtgcagtgcagcgcagcgcagc 57 |||||||||||||||| |||| ||||| Sbjct: 23311 gtgcagtgcagtgcagagcagggcagc 23285
>dbj|AK102117.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033084K24, full insert sequence Length = 1290 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgcagcg 53 |||||||||||||||| |||||| Sbjct: 65 gtgcagtgcagtgcagtgcagcg 87
>emb|AJ326061.1|HSA326061 Homo sapiens genomic sequence surrounding NotI site, clone NL1-DM10C Length = 610 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 46 gcgcagcgcagcccagccg 64 ||||||||||||||||||| Sbjct: 240 gcgcagcgcagcccagccg 222
>gb|AC155726.4| Mus musculus 6 BAC RP24-180C9 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 187560 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 34 cagtgcagtgcagcgcagc 52 ||||||||||||||||||| Sbjct: 21814 cagtgcagtgcagcgcagc 21832
>emb|BX682529.6| Zebrafish DNA sequence from clone CH211-194P13 in linkage group 19, complete sequence Length = 176981 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 gcattacatacatatgcta 117 ||||||||||||||||||| Sbjct: 160615 gcattacatacatatgcta 160633
>dbj|AK061583.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-312-A08, full insert sequence Length = 1289 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 31 gtgcagtgcagtgcagcgcagcg 53 |||||||||||||||| |||||| Sbjct: 64 gtgcagtgcagtgcagtgcagcg 86
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 27 caccgtgcagtgcagtgcagcgc 49 ||||||||||||| ||||||||| Sbjct: 2076337 caccgtgcagtgcggtgcagcgc 2076315
>gb|AE003774.3| Drosophila melanogaster chromosome 3R, section 112 of 118 of the complete sequence Length = 239051 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 gcagcgcagcgcagcccag 61 ||||||||||||||||||| Sbjct: 210739 gcagcgcagcgcagcccag 210721
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 132 ttaacccaagccttccatc 150 ||||||||||||||||||| Sbjct: 3265995 ttaacccaagccttccatc 3266013
>gb|AC132567.3| Mus musculus BAC clone RP24-559G13 from 3, complete sequence Length = 154142 Score = 38.2 bits (19), Expect = 8.3 Identities = 25/27 (92%) Strand = Plus / Plus Query: 37 tgcagtgcagcgcagcgcagcccagcc 63 |||||||||||||||| |||| ||||| Sbjct: 37646 tgcagtgcagcgcagcccagctcagcc 37672
>emb|AL645947.9| Mouse DNA sequence from clone RP23-338K8 on chromosome 11, complete sequence Length = 235868 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 101 attacatacatatgctaccacac 123 |||||| |||||||||||||||| Sbjct: 41444 attacaaacatatgctaccacac 41466
>emb|AL732433.7| Mouse DNA sequence from clone RP23-349N21 on chromosome X, complete sequence Length = 196655 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 101 attacatacatatgctaccacac 123 |||||| |||||||||||||||| Sbjct: 48124 attacaaacatatgctaccacac 48102
>dbj|AP003160.1| Homo sapiens genomic DNA, chromosome 1p36 clone:956M3, complete sequence Length = 130080 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 46 gcgcagcgcagcccagccg 64 ||||||||||||||||||| Sbjct: 54370 gcgcagcgcagcccagccg 54352 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,020,463 Number of Sequences: 3902068 Number of extensions: 1020463 Number of successful extensions: 72521 Number of sequences better than 10.0: 110 Number of HSP's better than 10.0 without gapping: 116 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71533 Number of HSP's gapped (non-prelim): 953 length of query: 170 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 148 effective length of database: 17,147,199,772 effective search space: 2537785566256 effective search space used: 2537785566256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
