ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd22a13 |
|---|---|
| Clone Library Name | barley_pub |
>SUI1_MAIZE (P56330) Protein translation factor SUI1 homolog (GOS2 protein)| Length = 115 Score = 173 bits (438), Expect = 3e-43 Identities = 86/89 (96%), Positives = 86/89 (96%) Frame = -1 Query: 514 AGSKDYVHVRIXQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIL 335 AGSKDYVHVRI QRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQD ELGQVI Sbjct: 27 AGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDPELGQVIQ 86 Query: 334 LQGDQRKNVSNFLVQAGIVKKEHIKIHGF 248 LQGDQRKNVSNFLVQAGIVKKEHIKIHGF Sbjct: 87 LQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
>SUI1_SPOST (Q9SM41) Protein translation factor SUI1 homolog| Length = 115 Score = 172 bits (435), Expect = 6e-43 Identities = 85/89 (95%), Positives = 86/89 (96%) Frame = -1 Query: 514 AGSKDYVHVRIXQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIL 335 AGSKDYVHVRI QRNGRKSLTTVQGLKKEFSY+KILKDLKKEFCCNGTVVQD ELGQVI Sbjct: 27 AGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQ 86 Query: 334 LQGDQRKNVSNFLVQAGIVKKEHIKIHGF 248 LQGDQRKNVSNFLVQAGIVKKEHIKIHGF Sbjct: 87 LQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
>SUI1_ORYSA (P33278) Protein translation factor SUI1 homolog (GOS2 protein)| Length = 115 Score = 172 bits (435), Expect = 6e-43 Identities = 85/89 (95%), Positives = 86/89 (96%) Frame = -1 Query: 514 AGSKDYVHVRIXQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIL 335 AGSKDYVHVRI QRNGRKSLTTVQGLKKEFSY+KILKDLKKEFCCNGTVVQD ELGQVI Sbjct: 27 AGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQ 86 Query: 334 LQGDQRKNVSNFLVQAGIVKKEHIKIHGF 248 LQGDQRKNVSNFLVQAGIVKKEHIKIHGF Sbjct: 87 LQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
>SUI1_SALBA (O48650) Protein translation factor SUI1 homolog| Length = 113 Score = 163 bits (413), Expect = 2e-40 Identities = 79/89 (88%), Positives = 86/89 (96%) Frame = -1 Query: 514 AGSKDYVHVRIXQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIL 335 AG+KDYVHVR+ QRNGRKSLTTVQGLKK++SY+KILKDLKKEFCCNGTVVQD ELGQVI Sbjct: 25 AGTKDYVHVRVQQRNGRKSLTTVQGLKKDYSYNKILKDLKKEFCCNGTVVQDPELGQVIQ 84 Query: 334 LQGDQRKNVSNFLVQAGIVKKEHIKIHGF 248 LQGDQRKNVS+FLVQAGIVKKE+IKIHGF Sbjct: 85 LQGDQRKNVSSFLVQAGIVKKENIKIHGF 113
>SUI12_ARATH (Q94JV4) Protein translation factor SUI1 homolog 2| Length = 113 Score = 162 bits (410), Expect = 5e-40 Identities = 77/89 (86%), Positives = 86/89 (96%) Frame = -1 Query: 514 AGSKDYVHVRIXQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIL 335 AG+K+YVH+R+ QRNGRKSLTTVQGLKKE+SYSKILKDLKKEFCCNGTVVQD+ELGQVI Sbjct: 25 AGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGTVVQDSELGQVIQ 84 Query: 334 LQGDQRKNVSNFLVQAGIVKKEHIKIHGF 248 LQGDQRKNVS FLVQAG+VKK++IKIHGF Sbjct: 85 LQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
>SUI11_ARATH (P41568) Protein translation factor SUI1 homolog 1| Length = 113 Score = 161 bits (407), Expect = 1e-39 Identities = 76/89 (85%), Positives = 86/89 (96%) Frame = -1 Query: 514 AGSKDYVHVRIXQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIL 335 AG+K+YVH+R+ QRNGRKSLTTVQGLKKE+SY+KILKDLKKEFCCNGTVVQD+ELGQVI Sbjct: 25 AGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCNGTVVQDSELGQVIQ 84 Query: 334 LQGDQRKNVSNFLVQAGIVKKEHIKIHGF 248 LQGDQRKNVS FLVQAG+VKK++IKIHGF Sbjct: 85 LQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
>SUI1_BRAOL (Q9SQF4) Protein translation factor SUI1 homolog (Translation| initiation factor nps45) Length = 113 Score = 159 bits (401), Expect = 6e-39 Identities = 75/89 (84%), Positives = 85/89 (95%) Frame = -1 Query: 514 AGSKDYVHVRIXQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIL 335 AG+K+YVH+R+ QRNGRKSLTTVQGLKKE+SY+KILKDLKKEFCCNGTVVQD+ELGQVI Sbjct: 25 AGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCNGTVVQDSELGQVIQ 84 Query: 334 LQGDQRKNVSNFLVQAGIVKKEHIKIHGF 248 LQGDQRKNVS FLVQAG+VKK+ I+IHGF Sbjct: 85 LQGDQRKNVSTFLVQAGLVKKDDIQIHGF 113
>SUI1_PIMBR (O82569) Protein translation factor SUI1 homolog| Length = 113 Score = 144 bits (363), Expect = 1e-34 Identities = 69/87 (79%), Positives = 76/87 (87%) Frame = -1 Query: 508 SKDYVHVRIXQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVILLQ 329 +K+YVH+RI QRNGRKSLTTVQGLKKE SY KILKDLKK CCNGTVV D ELG+VI LQ Sbjct: 27 TKEYVHIRIQQRNGRKSLTTVQGLKKELSYDKILKDLKKALCCNGTVVNDKELGKVIQLQ 86 Query: 328 GDQRKNVSNFLVQAGIVKKEHIKIHGF 248 GDQRKNVS F+VQAGIVKK+ IK+H F Sbjct: 87 GDQRKNVSTFIVQAGIVKKDQIKVHNF 113
>EIF1B_PIG (P61220) Eukaryotic translation initiation factor 1b (eIF1b)| (Protein translation factor SUI1 homolog GC20) Length = 113 Score = 121 bits (303), Expect = 1e-27 Identities = 52/89 (58%), Positives = 72/89 (80%) Frame = -1 Query: 514 AGSKDYVHVRIXQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIL 335 AG++DY+H+RI QRNGRK+LTTVQG+ ++ K++K KK+F CNGTV++ E G+VI Sbjct: 25 AGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQ 84 Query: 334 LQGDQRKNVSNFLVQAGIVKKEHIKIHGF 248 LQGDQRKN+ FL++ GIVK+E +K+HGF Sbjct: 85 LQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
>EIF1B_MOUSE (Q9CXU9) Eukaryotic translation initiation factor 1b (eIF1b)| Length = 113 Score = 121 bits (303), Expect = 1e-27 Identities = 52/89 (58%), Positives = 72/89 (80%) Frame = -1 Query: 514 AGSKDYVHVRIXQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIL 335 AG++DY+H+RI QRNGRK+LTTVQG+ ++ K++K KK+F CNGTV++ E G+VI Sbjct: 25 AGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQ 84 Query: 334 LQGDQRKNVSNFLVQAGIVKKEHIKIHGF 248 LQGDQRKN+ FL++ GIVK+E +K+HGF Sbjct: 85 LQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
>EIF1B_MACFA (Q4R4X9) Eukaryotic translation initiation factor 1b (eIF1b)| Length = 113 Score = 121 bits (303), Expect = 1e-27 Identities = 52/89 (58%), Positives = 72/89 (80%) Frame = -1 Query: 514 AGSKDYVHVRIXQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIL 335 AG++DY+H+RI QRNGRK+LTTVQG+ ++ K++K KK+F CNGTV++ E G+VI Sbjct: 25 AGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQ 84 Query: 334 LQGDQRKNVSNFLVQAGIVKKEHIKIHGF 248 LQGDQRKN+ FL++ GIVK+E +K+HGF Sbjct: 85 LQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
>EIF1B_HUMAN (O60739) Eukaryotic translation initiation factor 1b (eIF1b)| (Protein translation factor SUI1 homolog GC20) Length = 113 Score = 121 bits (303), Expect = 1e-27 Identities = 52/89 (58%), Positives = 72/89 (80%) Frame = -1 Query: 514 AGSKDYVHVRIXQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIL 335 AG++DY+H+RI QRNGRK+LTTVQG+ ++ K++K KK+F CNGTV++ E G+VI Sbjct: 25 AGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQ 84 Query: 334 LQGDQRKNVSNFLVQAGIVKKEHIKIHGF 248 LQGDQRKN+ FL++ GIVK+E +K+HGF Sbjct: 85 LQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
>EIF1_PONPY (Q5RFF4) Eukaryotic translation initiation factor 1 (eIF1) (Protein| translation factor SUI1 homolog) Length = 113 Score = 117 bits (294), Expect = 1e-26 Identities = 50/89 (56%), Positives = 70/89 (78%) Frame = -1 Query: 514 AGSKDYVHVRIXQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIL 335 AG++DY+H+RI QRNGRK+LTTVQG+ ++ K++K KK+F CNGTV++ E G+VI Sbjct: 25 AGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQ 84 Query: 334 LQGDQRKNVSNFLVQAGIVKKEHIKIHGF 248 LQGDQRKN+ FLV+ G+ K + +K+HGF Sbjct: 85 LQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
>EIF1_HUMAN (P41567) Eukaryotic translation initiation factor 1 (eIF1) (Protein| translation factor SUI1 homolog) (Sui1iso1) (A121) Length = 113 Score = 117 bits (294), Expect = 1e-26 Identities = 50/89 (56%), Positives = 70/89 (78%) Frame = -1 Query: 514 AGSKDYVHVRIXQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIL 335 AG++DY+H+RI QRNGRK+LTTVQG+ ++ K++K KK+F CNGTV++ E G+VI Sbjct: 25 AGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQ 84 Query: 334 LQGDQRKNVSNFLVQAGIVKKEHIKIHGF 248 LQGDQRKN+ FLV+ G+ K + +K+HGF Sbjct: 85 LQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
>EIF1_BOVIN (Q5E938) Eukaryotic translation initiation factor 1 (eIF1) (Protein| translation factor SUI1 homolog) Length = 113 Score = 117 bits (294), Expect = 1e-26 Identities = 50/89 (56%), Positives = 70/89 (78%) Frame = -1 Query: 514 AGSKDYVHVRIXQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIL 335 AG++DY+H+RI QRNGRK+LTTVQG+ ++ K++K KK+F CNGTV++ E G+VI Sbjct: 25 AGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQ 84 Query: 334 LQGDQRKNVSNFLVQAGIVKKEHIKIHGF 248 LQGDQRKN+ FLV+ G+ K + +K+HGF Sbjct: 85 LQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
>EIF1_MOUSE (P48024) Eukaryotic translation initiation factor 1 (eIF1) (Protein| translation factor SUI1 homolog) Length = 113 Score = 117 bits (293), Expect = 2e-26 Identities = 49/89 (55%), Positives = 70/89 (78%) Frame = -1 Query: 514 AGSKDYVHVRIXQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIL 335 AG++DY+H+RI QRNGRK+LTTVQG+ ++ K++K KK+F CNGTV++ E G+VI Sbjct: 25 AGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQ 84 Query: 334 LQGDQRKNVSNFLVQAGIVKKEHIKIHGF 248 LQGDQRKN+ FL++ G+ K + +K+HGF Sbjct: 85 LQGDQRKNICQFLIEIGLAKDDQLKVHGF 113
>SUI1_ASHGO (Q755R1) Protein translation factor SUI1| Length = 108 Score = 108 bits (270), Expect = 9e-24 Identities = 49/89 (55%), Positives = 68/89 (76%) Frame = -1 Query: 514 AGSKDYVHVRIXQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIL 335 A S +Y+H+RI QRNGRK+LTTVQG+ +E+ +ILK L+K+F CNG +V+D E+G++I Sbjct: 20 ASSSNYIHIRIQQRNGRKTLTTVQGIPEEYDLKRILKVLRKDFGCNGNMVKDDEMGEIIQ 79 Query: 334 LQGDQRKNVSNFLVQAGIVKKEHIKIHGF 248 LQGDQR V FL+ + K++IKIHGF Sbjct: 80 LQGDQRAKVCEFLITQLAIPKKNIKIHGF 108
>SUI1_SCHPO (P79060) Protein translation factor sui1| Length = 109 Score = 108 bits (269), Expect = 1e-23 Identities = 51/83 (61%), Positives = 66/83 (79%) Frame = -1 Query: 496 VHVRIXQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVILLQGDQR 317 +H+RI QRNGRK+LTTVQGL +EF +IL+ LKK+F CNGT+V+D +LG+VI LQGDQR Sbjct: 27 IHIRIQQRNGRKTLTTVQGLPREFDQKRILRALKKDFACNGTIVKDDDLGEVIQLQGDQR 86 Query: 316 KNVSNFLVQAGIVKKEHIKIHGF 248 V FL Q ++K++IKIHGF Sbjct: 87 IKVMEFLTQQLGLQKKNIKIHGF 109
>SUI1_ANOGA (P42678) Protein translation factor SUI1 homolog| Length = 110 Score = 107 bits (268), Expect = 1e-23 Identities = 47/83 (56%), Positives = 64/83 (77%) Frame = -1 Query: 496 VHVRIXQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVILLQGDQR 317 VH+RI QRNGRK+LTTVQGL E+ KI++ KKEF CNGTV++ E G+V+ LQGDQR Sbjct: 28 VHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRACKKEFACNGTVIEHPEYGEVLQLQGDQR 87 Query: 316 KNVSNFLVQAGIVKKEHIKIHGF 248 +N+ +L ++G+ K E +K+HGF Sbjct: 88 ENICQWLTKSGLAKPEQLKVHGF 110
>SUI1_YEAST (P32911) Protein translation factor SUI1| Length = 108 Score = 107 bits (266), Expect = 2e-23 Identities = 47/87 (54%), Positives = 68/87 (78%) Frame = -1 Query: 508 SKDYVHVRIXQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVILLQ 329 + +Y+H+RI QRNGRK+LTTVQG+ +E+ +ILK LKK+F CNG +V+D E+G++I LQ Sbjct: 22 TSNYIHIRIQQRNGRKTLTTVQGVPEEYDLKRILKVLKKDFACNGNIVKDPEMGEIIQLQ 81 Query: 328 GDQRKNVSNFLVQAGIVKKEHIKIHGF 248 GDQR V F++ ++K++IKIHGF Sbjct: 82 GDQRAKVCEFMISQLGLQKKNIKIHGF 108
>SUI1_DROME (Q9VZS3) Protein translation factor SUI1 homolog| Length = 110 Score = 107 bits (266), Expect = 2e-23 Identities = 46/83 (55%), Positives = 63/83 (75%) Frame = -1 Query: 496 VHVRIXQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVILLQGDQR 317 VH+RI QRNGRK+LTTVQGL E+ KI++ KKEF CNGTV++ E G+V+ LQGDQR Sbjct: 28 VHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRSCKKEFACNGTVIEHPEYGEVLQLQGDQR 87 Query: 316 KNVSNFLVQAGIVKKEHIKIHGF 248 +N+ +L + G+ K + +K+HGF Sbjct: 88 ENICQWLTKVGLAKPDQLKVHGF 110
>EIF1_CHICK (P51971) Eukaryotic translation initiation factor 1 (eIF1) (Protein| translation factor SUI1 homolog) (Fragment) Length = 79 Score = 100 bits (250), Expect = 2e-21 Identities = 44/79 (55%), Positives = 60/79 (75%) Frame = -1 Query: 484 IXQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVILLQGDQRKNVS 305 I QRNGRK+LTTVQG+ ++ K++K KK+F CNGTV++ E G+VI LQGDQRKN+ Sbjct: 1 IQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNIC 60 Query: 304 NFLVQAGIVKKEHIKIHGF 248 FLV+ G+ K + +K+HGF Sbjct: 61 QFLVEIGLAKDDQLKVHGF 79
>SUI1_THEVO (Q97BW9) Protein translation factor SUI1 homolog| Length = 100 Score = 41.6 bits (96), Expect = 0.001 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Frame = -1 Query: 496 VHVRIXQRNGRKSLTTVQGLKKEFS-YSKILKDLKKEFCCNGTVVQDTELGQVILLQGDQ 320 V + + +R K +T ++G+ + KI K+LKK+ GTV + G++I LQGD Sbjct: 26 VKIVVDKRRYGKFVTIIEGIDPKIEDIEKIAKELKKKVASGGTVKE----GRIIELQGDH 81 Query: 319 RKNVSNFLVQAG 284 R+ V FL G Sbjct: 82 RQEVKKFLEDMG 93
>SUI1_HALSA (Q9HME3) Protein translation factor SUI1 homolog| Length = 97 Score = 40.0 bits (92), Expect = 0.004 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 1/78 (1%) Frame = -1 Query: 514 AGSKDYVHVRIXQRNGRKSLTTVQGLK-KEFSYSKILKDLKKEFCCNGTVVQDTELGQVI 338 A + +RI +R K +T ++G K+ + DLK +F C GT V+D E I Sbjct: 21 AKESQQIEIRIDERRYGKEVTVIEGFDPKDVDLDSLSSDLKSKFACGGT-VEDGE----I 75 Query: 337 LLQGDQRKNVSNFLVQAG 284 LQG+ V +FL G Sbjct: 76 ELQGNHSGRVEDFLRNKG 93
>SUI1_HALMA (Q5UZP9) Protein translation factor SUI1 homolog| Length = 97 Score = 40.0 bits (92), Expect = 0.004 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Frame = -1 Query: 496 VHVRIXQRNGRKSLTTVQGLK-KEFSYSKILKDLKKEFCCNGTVVQDTELGQVILLQGDQ 320 +++RI +R K +T ++G K+ + DLK +F C GTV E GQ I LQG+ Sbjct: 27 INIRIDERRYGKEVTIIEGFDPKDVDMDSLSSDLKSKFACGGTV----EDGQ-IELQGNH 81 Query: 319 RKNVSNFLVQAG 284 V +FL G Sbjct: 82 TGRVEDFLRDKG 93
>SUI1_PYRFU (Q8U006) Protein translation factor SUI1 homolog| Length = 98 Score = 38.5 bits (88), Expect = 0.011 Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 3/77 (3%) Frame = -1 Query: 505 KDYVHVRIXQRNGR--KSLTTVQGL-KKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIL 335 K+ +R+ R K T ++G+ +KEF +I K LK + C GT I Sbjct: 18 KEQQRIRVYTERARYGKIKTIIEGIDEKEFDLEEIAKKLKAKLACGGTAKNGR-----IE 72 Query: 334 LQGDQRKNVSNFLVQAG 284 LQGD R + LV+ G Sbjct: 73 LQGDHRDRIKKLLVELG 89
>SUI1_PYRAB (Q9V1U3) Protein translation factor SUI1 homolog| Length = 99 Score = 37.0 bits (84), Expect = 0.032 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%) Frame = -1 Query: 505 KDYVHVRIXQRNGR--KSLTTVQGL-KKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIL 335 K+ +R+ R K T ++G+ +KEF +I K LK + C GT I Sbjct: 19 KEQQRIRVYTERARYGKIKTIIEGIDEKEFDLEEIAKKLKAKLACGGTAKNGR-----IE 73 Query: 334 LQGDQRKNVSNFLVQAG 284 LQGD R + L + G Sbjct: 74 LQGDHRDRIKKLLAELG 90
>SUI1_PYRKO (Q5JDH7) Protein translation factor SUI1 homolog| Length = 98 Score = 36.2 bits (82), Expect = 0.054 Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 3/77 (3%) Frame = -1 Query: 505 KDYVHVRIXQRNGR--KSLTTVQGL-KKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIL 335 K+ +R+ R K T ++G+ +KEF I K LK + C GT I Sbjct: 18 KEQQRIRVYVERARYGKLKTIIEGIDEKEFDLEDIAKKLKAKLACGGTAKNGR-----IE 72 Query: 334 LQGDQRKNVSNFLVQAG 284 LQGD R V L + G Sbjct: 73 LQGDHRDRVKKLLAELG 89
>SUI1_PYRHO (P58193) Protein translation factor SUI1 homolog| Length = 99 Score = 35.8 bits (81), Expect = 0.070 Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%) Frame = -1 Query: 496 VHVRIXQRNGRKSLTTVQGL-KKEFSYSKILKDLKKEFCCNGTVVQDTELGQVILLQGDQ 320 + V I + K T ++G+ +KEF +I K LK + C GT I LQGD Sbjct: 24 IKVYIERARYGKVKTIIEGIDEKEFDLEEIAKKLKAKLACGGTAKNGR-----IELQGDH 78 Query: 319 RKNVSNFLVQAG 284 R + L + G Sbjct: 79 RDRIKKLLAELG 90
>DENR_SCHPO (O42929) Density-regulated protein homolog| Length = 190 Score = 35.4 bits (80), Expect = 0.092 Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 2/82 (2%) Frame = -1 Query: 496 VHVRIXQRNGRKSLTTVQGLKK-EFSYSKILKDLKKEFCCNGTVVQDTELGQVILLQGDQ 320 V ++ +R RK +TTVQGL K K L +F +V + + I++QGD Sbjct: 99 VLIKTIERTKRKRVTTVQGLDAFGIETKKAAKMLANKFATGASVTKTADKKDEIVVQGDL 158 Query: 319 RKNVSNFLVQA-GIVKKEHIKI 257 ++ +F+++ V +++IKI Sbjct: 159 NYDIFDFILEKFKEVPEDNIKI 180
>Y546_SYNY3 (Q55397) Hypothetical protein sll0546| Length = 111 Score = 33.9 bits (76), Expect = 0.27 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 3/77 (3%) Frame = -1 Query: 493 HVRI-XQRNGRK--SLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVILLQGD 323 +VRI R+GRK ++T V GL+ + L K FC +G +++ + +QGD Sbjct: 35 NVRIQATRSGRKGKTVTVVSGLQLSAMGQQALLKALKSFCGSGGTLKE----DCVEIQGD 90 Query: 322 QRKNVSNFLVQAGIVKK 272 QR+ + +L++ G K Sbjct: 91 QREKILAYLLKQGYKAK 107
>SUI1_METMA (Q8PYK3) Protein translation factor SUI1 homolog| Length = 102 Score = 33.5 bits (75), Expect = 0.35 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 1/86 (1%) Frame = -1 Query: 514 AGSKDYVHVRIXQRNGRKSLTTVQGLK-KEFSYSKILKDLKKEFCCNGTVVQDTELGQVI 338 A + + V++ +R K +T V+G E ++ LK +F C GTV G + Sbjct: 22 AKEQQRITVKVNRRRYGKEVTVVEGFDASEIDLHELSTYLKSKFACGGTV-----KGNTV 76 Query: 337 LLQGDQRKNVSNFLVQAGIVKKEHIK 260 LQG+ + L++ G E IK Sbjct: 77 ELQGNHLTRMKEVLMEKGF-SAEQIK 101
>SUI1_METAC (Q8TIT3) Protein translation factor SUI1 homolog| Length = 102 Score = 33.5 bits (75), Expect = 0.35 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 1/86 (1%) Frame = -1 Query: 514 AGSKDYVHVRIXQRNGRKSLTTVQGLK-KEFSYSKILKDLKKEFCCNGTVVQDTELGQVI 338 A + + V++ +R K +T V+G E ++ LK +F C GTV G + Sbjct: 22 AKEQQRITVKVNRRRYGKEVTVVEGFDASEIDLHELSTYLKSKFACGGTV-----KGNTV 76 Query: 337 LLQGDQRKNVSNFLVQAGIVKKEHIK 260 LQG+ + L++ G E IK Sbjct: 77 ELQGNHLARMKEVLMEKGF-SAEQIK 101
>SUI1_METKA (Q8TX33) Protein translation factor SUI1 homolog| Length = 106 Score = 33.1 bits (74), Expect = 0.46 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Frame = -1 Query: 463 KSLTTVQGLKKE-FSYSKILKDLKKEFCCNGTVVQDTELGQVILLQGDQRKNVSNFLVQA 287 K +T ++GL ++ LK+E C GT + I+LQGD R V FL++ Sbjct: 41 KVVTIIEGLDDAGIDLQELASKLKRECACGGTAKEGK-----IILQGDHRNKVREFLIKK 95 Query: 286 GIVKKEHIKI 257 ++ I++ Sbjct: 96 EGFSEDAIEV 105
>GLSA_ANASP (Q8YSZ5) Glutaminase (EC 3.5.1.2)| Length = 334 Score = 30.0 bits (66), Expect = 3.9 Identities = 17/70 (24%), Positives = 33/70 (47%) Frame = -1 Query: 487 RIXQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVILLQGDQRKNV 308 ++ Q + L T+Q + K F+Y L+D +++ V+ T ++ +Q K Sbjct: 61 QVYQVGDYQQLFTIQSISKVFAYGLALEDHGRDYVLTRVGVEPTGEAFNAIILDEQSKRP 120 Query: 307 SNFLVQAGIV 278 N +V AG + Sbjct: 121 YNPMVNAGAI 130
>SMC2_MOUSE (Q8CG48) Structural maintenance of chromosome 2-like 1 protein| (Chromosome-associated protein E) (XCAP-E homolog) (FGF-inducible protein 16) Length = 1191 Score = 29.3 bits (64), Expect = 6.6 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 6/76 (7%) Frame = -1 Query: 340 ILLQGDQRKNVSNFLVQAGIVKKEHIKIHGF*ATASSLSESACKAANIYW------WCSI 179 +L + ++R N + + + IV+ + KI AT L + +A NI W + SI Sbjct: 990 VLTEAEERYN--DLMKKKRIVENDKSKIL---ATIEDLDQKKNQALNIAWQKVNKDFGSI 1044 Query: 178 FSCVLALAGATLAPSE 131 FS +L A A LAP E Sbjct: 1045 FSTLLPGANAMLAPPE 1060
>TITF1_RAT (P23441) Thyroid transcription factor 1 (Thyroid nuclear factor 1)| (TTF-1) (Homeobox protein Nkx-2.1) Length = 372 Score = 29.3 bits (64), Expect = 6.6 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Frame = +3 Query: 84 KHIRTQRGGY-ARLCVYSEGASVAPASASTQLNILHHQYILAALH 215 K + + GG A L Y +G + PA+A Q + HH + AA H Sbjct: 25 KKVGMEGGGLGAPLAAYRQGQAAPPAAAMQQHAVGHHGAVTAAYH 69
>TITF1_MOUSE (P50220) Thyroid transcription factor 1 (Thyroid nuclear factor 1)| (TTF-1) (Homeobox protein Nkx-2.1) Length = 372 Score = 29.3 bits (64), Expect = 6.6 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Frame = +3 Query: 84 KHIRTQRGGY-ARLCVYSEGASVAPASASTQLNILHHQYILAALH 215 K + + GG A L Y +G + PA+A Q + HH + AA H Sbjct: 25 KKVGMEGGGLGAPLAAYRQGQAAPPAAAMQQHAVGHHGAVTAAYH 69
>TITF1_CANFA (P43698) Thyroid transcription factor 1 (Thyroid nuclear factor 1)| (TTF-1) (Homeobox protein Nkx-2.1) Length = 371 Score = 29.3 bits (64), Expect = 6.6 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Frame = +3 Query: 84 KHIRTQRGGY-ARLCVYSEGASVAPASASTQLNILHHQYILAALH 215 K + + GG A L Y +G + PA+A Q + HH + AA H Sbjct: 25 KKVGMEGGGLGAPLAAYRQGQAAPPAAAMQQHAVGHHGAVTAAYH 69
>MDR3_CRIGR (P23174) Multidrug resistance protein 3 (EC 3.6.3.44) (P-glycoprotein| 3) Length = 1281 Score = 28.9 bits (63), Expect = 8.6 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 7/75 (9%) Frame = -1 Query: 466 RKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTE-----LGQVILLQGDQRK--NV 308 R ++ +QGL E + L + C TVVQ E + +LL G + K N+ Sbjct: 1048 RANMPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGTVLLDGQEAKKLNI 1107 Query: 307 SNFLVQAGIVKKEHI 263 Q GIV +E + Sbjct: 1108 QWLRAQLGIVSQEPV 1122 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,685,151 Number of Sequences: 219361 Number of extensions: 1529892 Number of successful extensions: 3655 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 3540 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3655 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3812186532 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
