Clone Name | rbasd21l12 |
---|---|
Clone Library Name | barley_pub |
>OPR2_ARATH (Q8GYB8) 12-oxophytodienoate reductase 2 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 2) (OPDA-reductase 2) (AtOPR2) Length = 374 Score = 35.4 bits (80), Expect = 0.040 Identities = 16/30 (53%), Positives = 17/30 (56%) Frame = -3 Query: 221 IGAPLTKYIRXXFYLSDPXXGYXXXPVLPS 132 + APL KY R FY SDP GY P L S Sbjct: 343 LDAPLNKYNRSTFYTSDPVVGYTDYPSLES 372
>OPR1_ARATH (Q8LAH7) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase 1) (AtOPR1) (FS-AT-I) Length = 372 Score = 35.4 bits (80), Expect = 0.040 Identities = 16/30 (53%), Positives = 17/30 (56%) Frame = -3 Query: 221 IGAPLTKYIRXXFYLSDPXXGYXXXPVLPS 132 + APL KY R FY SDP GY P L S Sbjct: 341 VDAPLNKYDRPTFYTSDPVVGYTDYPFLES 370
>OPR1_LYCES (Q9XG54) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase 1) (LeOPR1) Length = 376 Score = 34.7 bits (78), Expect = 0.069 Identities = 15/28 (53%), Positives = 16/28 (57%) Frame = -3 Query: 221 IGAPLTKYIRXXFYLSDPXXGYXXXPVL 138 + APL KY R FY SDP GY P L Sbjct: 345 LNAPLNKYNRDTFYTSDPIVGYTDYPFL 372
>OPRL_LYCES (Q9FEX0) 12-oxophytodienoate reductase-like protein (EC 1.3.1.-)| (LeOPR2) Length = 355 Score = 34.3 bits (77), Expect = 0.090 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = -3 Query: 221 IGAPLTKYIRXXFYLSDPXXGYXXXPVL 138 + APL KY R FY +DP GY P L Sbjct: 324 VNAPLNKYNRSTFYTNDPIIGYTDYPFL 351
>OPR3_LYCES (Q9FEW9) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (LeOPR3) Length = 396 Score = 33.1 bits (74), Expect = 0.20 Identities = 14/28 (50%), Positives = 15/28 (53%) Frame = -3 Query: 221 IGAPLTKYIRXXFYLSDPXXGYXXXPVL 138 + APL KY R FY DP GY P L Sbjct: 357 LNAPLNKYNRKTFYTQDPVVGYTDYPFL 384
>FRMD6_MOUSE (Q8C0V9) FERM domain-containing protein 6| Length = 622 Score = 28.9 bits (63), Expect = 3.8 Identities = 11/36 (30%), Positives = 18/36 (50%) Frame = -3 Query: 110 GMXPSHPXQIVHLMXQYYVKGIRSLXPMLMQSYVYW 3 G+ P I+H QYYV+ + + + + Y YW Sbjct: 99 GIDQFGPPMIIHFRVQYYVENGKLISDRIARYYYYW 134
>FRMD6_HUMAN (Q96NE9) FERM domain-containing protein 6| Length = 622 Score = 28.9 bits (63), Expect = 3.8 Identities = 12/36 (33%), Positives = 17/36 (47%) Frame = -3 Query: 110 GMXPSHPXQIVHLMXQYYVKGIRSLXPMLMQSYVYW 3 G+ P I+H QYYV+ R + + Y YW Sbjct: 99 GIDQFGPPMIIHFRVQYYVENGRLISDRAARYYYYW 134
>FRMD6_RAT (Q8VII0) FERM domain-containing protein 6 (FERM domain-containing| protein 163SCII) (Fragment) Length = 327 Score = 28.9 bits (63), Expect = 3.8 Identities = 11/36 (30%), Positives = 18/36 (50%) Frame = -3 Query: 110 GMXPSHPXQIVHLMXQYYVKGIRSLXPMLMQSYVYW 3 G+ P I+H QYYV+ + + + + Y YW Sbjct: 91 GIDQFGPPMIIHFRVQYYVENGKLISDRIARYYYYW 126
>OPR3_ARATH (Q9FUP0) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (Delayed dehiscence 1) (AtOPR3) Length = 391 Score = 28.9 bits (63), Expect = 3.8 Identities = 13/28 (46%), Positives = 13/28 (46%) Frame = -3 Query: 221 IGAPLTKYIRXXFYLSDPXXGYXXXPVL 138 I L KY R FY DP GY P L Sbjct: 358 IDGELNKYNRKTFYTQDPVVGYTDYPFL 385 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,029,603 Number of Sequences: 219361 Number of extensions: 317749 Number of successful extensions: 396 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 394 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 396 length of database: 80,573,946 effective HSP length: 49 effective length of database: 69,825,257 effective search space used: 1675806168 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)