ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd21l11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1OPR1_LYCES (Q9XG54) 12-oxophytodienoate reductase 1 (EC 1.3.1.42... 144 3e-48
2OPR2_ARATH (Q8GYB8) 12-oxophytodienoate reductase 2 (EC 1.3.1.42... 134 4e-47
3OPR1_ARATH (Q8LAH7) 12-oxophytodienoate reductase 1 (EC 1.3.1.42... 138 1e-46
4OPRL_LYCES (Q9FEX0) 12-oxophytodienoate reductase-like protein (... 128 6e-37
5OPRL1_ARATH (Q8GYA3) Putative 12-oxophytodienoate reductase-like... 107 6e-37
6OPR3_LYCES (Q9FEW9) 12-oxophytodienoate reductase 3 (EC 1.3.1.42... 115 6e-30
7OPR3_ARATH (Q9FUP0) 12-oxophytodienoate reductase 3 (EC 1.3.1.42... 102 1e-25
8OYEB_SCHPO (Q09671) Putative NADPH dehydrogenase C5H10.10 (EC 1.... 71 3e-12
9OYEA_SCHPO (Q09670) Putative NADPH dehydrogenase C5H10.04 (EC 1.... 69 1e-11
10NEMA_ECOLI (P77258) N-ethylmaleimide reductase (EC 1.-.-.-) (N-e... 54 3e-11
11OYE3_YEAST (P41816) NADPH dehydrogenase 3 (EC 1.6.99.1) (Old yel... 59 1e-08
12OYE2_YEAST (Q03558) NADPH dehydrogenase 2 (EC 1.6.99.1) (Old yel... 57 3e-08
13OYE1_SACPS (Q02899) NADPH dehydrogenase 1 (EC 1.6.99.1) (Old yel... 57 3e-08
14KYE1_KLULA (P40952) NADPH dehydrogenase 1 (EC 1.6.99.1) (Old yel... 54 3e-07
15OPRL2_ARATH (Q9C5W1) Putative 12-oxophytodienoate reductase-like... 51 3e-06
16EBP1_CANAL (P43084) Probable NADPH dehydrogenase (EC 1.6.99.1) (... 46 8e-05
17FRMD6_MOUSE (Q8C0V9) FERM domain-containing protein 6 34 0.31
18FRMD6_HUMAN (Q96NE9) FERM domain-containing protein 6 34 0.31
19FRMD6_RAT (Q8VII0) FERM domain-containing protein 6 (FERM domain... 34 0.31
20MANBA_CAEEL (Q93324) Probable beta-mannosidase precursor (EC 3.2... 32 1.5
21ALF1_TREDE (Q73QV3) Fructose-bisphosphate aldolase class 1 (EC 4... 31 2.6
22ZSWM4_HUMAN (Q9H7M6) Zinc finger SWIM domain-containing protein 4 31 3.4
23ZSWM4_MOUSE (Q8C7B8) Zinc finger SWIM domain-containing protein 4 30 5.8
24PRI1_YEAST (P10363) DNA primase small subunit (EC 2.7.7.-) (DNA ... 30 7.6
25TAF4B_HUMAN (Q92750) Transcription initiation factor TFIID 105 k... 30 7.6
26Y4618_METAC (Q8THA2) UPF0313 protein MA4618 29 10.0

>OPR1_LYCES (Q9XG54) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)|
           (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase
           1) (LeOPR1)
          Length = 376

 Score =  144 bits (362), Expect(2) = 3e-48
 Identities = 65/88 (73%), Positives = 76/88 (86%)
 Frame = -1

Query: 487 EKFETPHSLRPIRDAFKGTFIVAGGYDRDDGNKAIADGYADLVAYGRLFLSNPDLPRRFE 308
           EK E   SL P+R A+KGTFIVAGGYDR+DGN+A+ +  ADLVAYGRLF+SNPDLP+RFE
Sbjct: 285 EKIECTESLVPMRKAYKGTFIVAGGYDREDGNRALIEDRADLVAYGRLFISNPDLPKRFE 344

Query: 307 IGAPLNKYIRDTFYLSDPVIGYTDYPFL 224
           + APLNKY RDTFY SDP++GYTDYPFL
Sbjct: 345 LNAPLNKYNRDTFYTSDPIVGYTDYPFL 372



 Score = 68.2 bits (165), Expect(2) = 3e-48
 Identities = 29/49 (59%), Positives = 37/49 (75%)
 Frame = -3

Query: 626 RLSPFASYSEASDSNPEALGLYMAHALNKFGILYCHMVEPRDGEYW*KV 480
           R+SPFA Y+EA D+NP ALGLYM  +LNK+ + YCH+VEPR    W K+
Sbjct: 239 RISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKI 287



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>OPR2_ARATH (Q8GYB8) 12-oxophytodienoate reductase 2 (EC 1.3.1.42)|
           (12-oxophytodienoate-10,11-reductase 2) (OPDA-reductase
           2) (AtOPR2)
          Length = 374

 Score =  134 bits (338), Expect(2) = 4e-47
 Identities = 62/95 (65%), Positives = 75/95 (78%)
 Frame = -1

Query: 502 MVNIGEKFETPHSLRPIRDAFKGTFIVAGGYDRDDGNKAIADGYADLVAYGRLFLSNPDL 323
           M  +GE     H+L P+R+AFKGTFI AGG+ R+DGN+A+A G  DLVAYGR FL+NPDL
Sbjct: 278 MKTVGEIAACSHTLMPMREAFKGTFISAGGFTREDGNEAVAKGRTDLVAYGRWFLANPDL 337

Query: 322 PRRFEIGAPLNKYIRDTFYLSDPVIGYTDYPFLPS 218
           P+RF++ APLNKY R TFY SDPV+GYTDYP L S
Sbjct: 338 PKRFQLDAPLNKYNRSTFYTSDPVVGYTDYPSLES 372



 Score = 73.6 bits (179), Expect(2) = 4e-47
 Identities = 31/41 (75%), Positives = 36/41 (87%)
 Frame = -3

Query: 626 RLSPFASYSEASDSNPEALGLYMAHALNKFGILYCHMVEPR 504
           RLSPFA Y E+ D+NPEALGLYM  +LNK+GILYCHM+EPR
Sbjct: 237 RLSPFADYMESGDTNPEALGLYMVESLNKYGILYCHMIEPR 277



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>OPR1_ARATH (Q8LAH7) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)|
           (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase
           1) (AtOPR1) (FS-AT-I)
          Length = 372

 Score =  138 bits (348), Expect(2) = 1e-46
 Identities = 63/95 (66%), Positives = 76/95 (80%)
 Frame = -1

Query: 502 MVNIGEKFETPHSLRPIRDAFKGTFIVAGGYDRDDGNKAIADGYADLVAYGRLFLSNPDL 323
           M  +GE    PH+L P+R AFKGTFI AGG+ R+DGN+A++ G  DLVAYGR FL+NPDL
Sbjct: 276 MKTMGEVHACPHTLMPMRKAFKGTFISAGGFTREDGNEAVSKGRTDLVAYGRWFLANPDL 335

Query: 322 PRRFEIGAPLNKYIRDTFYLSDPVIGYTDYPFLPS 218
           P+RF++ APLNKY R TFY SDPV+GYTDYPFL S
Sbjct: 336 PKRFQVDAPLNKYDRPTFYTSDPVVGYTDYPFLES 370



 Score = 67.8 bits (164), Expect(2) = 1e-46
 Identities = 29/41 (70%), Positives = 35/41 (85%)
 Frame = -3

Query: 626 RLSPFASYSEASDSNPEALGLYMAHALNKFGILYCHMVEPR 504
           RLSPFA Y E+ D+NP ALGLYMA +LNK+GILYCH++E R
Sbjct: 235 RLSPFADYMESGDTNPGALGLYMAESLNKYGILYCHVIEAR 275



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>OPRL_LYCES (Q9FEX0) 12-oxophytodienoate reductase-like protein (EC 1.3.1.-)|
           (LeOPR2)
          Length = 355

 Score =  128 bits (321), Expect(2) = 6e-37
 Identities = 56/81 (69%), Positives = 68/81 (83%)
 Frame = -1

Query: 466 SLRPIRDAFKGTFIVAGGYDRDDGNKAIADGYADLVAYGRLFLSNPDLPRRFEIGAPLNK 287
           SL PIR AFKGT I +GGY + DG KAI + YADL+++GR+FL+NPDLP+RFE+ APLNK
Sbjct: 271 SLLPIRKAFKGTLIASGGYGKSDGEKAIDENYADLISFGRMFLANPDLPKRFEVNAPLNK 330

Query: 286 YIRDTFYLSDPVIGYTDYPFL 224
           Y R TFY +DP+IGYTDYPFL
Sbjct: 331 YNRSTFYTNDPIIGYTDYPFL 351



 Score = 45.8 bits (107), Expect(2) = 6e-37
 Identities = 22/42 (52%), Positives = 29/42 (69%)
 Frame = -3

Query: 626 RLSPFASYSEASDSNPEALGLYMAHALNKFGILYCHMVEPRD 501
           +LSPF       DSN EAL  YMA+ L+K G+LY H++EPR+
Sbjct: 228 KLSPFDG---KKDSNSEALATYMANELSKLGVLYLHVMEPRE 266



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>OPRL1_ARATH (Q8GYA3) Putative 12-oxophytodienoate reductase-like protein 1 (EC|
           1.3.1.-)
          Length = 324

 Score =  107 bits (268), Expect(2) = 6e-37
 Identities = 50/72 (69%), Positives = 59/72 (81%)
 Frame = -1

Query: 502 MVNIGEKFETPHSLRPIRDAFKGTFIVAGGYDRDDGNKAIADGYADLVAYGRLFLSNPDL 323
           M  + E FE   SL P+R+AF GTFIVAGGY R+DGNKA+A+G  DLVAYGRLFL+NPDL
Sbjct: 253 MKTVSEIFECRESLTPMRNAFNGTFIVAGGYTREDGNKAVAEGRTDLVAYGRLFLANPDL 312

Query: 322 PRRFEIGAPLNK 287
           P+RFE+ APLNK
Sbjct: 313 PKRFELNAPLNK 324



 Score = 66.2 bits (160), Expect(2) = 6e-37
 Identities = 28/41 (68%), Positives = 35/41 (85%)
 Frame = -3

Query: 626 RLSPFASYSEASDSNPEALGLYMAHALNKFGILYCHMVEPR 504
           RLSPFA Y E+ D++P+ LGLYMA +LN+F ILYCHM+EPR
Sbjct: 212 RLSPFADYMESGDTDPKRLGLYMAKSLNRFEILYCHMIEPR 252



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>OPR3_LYCES (Q9FEW9) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)|
           (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase
           3) (LeOPR3)
          Length = 396

 Score =  115 bits (289), Expect(2) = 6e-30
 Identities = 53/90 (58%), Positives = 69/90 (76%)
 Frame = -1

Query: 493 IGEKFETPHSLRPIRDAFKGTFIVAGGYDRDDGNKAIADGYADLVAYGRLFLSNPDLPRR 314
           +G + E    +R +R+A++GTFI +GGY R+ G +A+A G ADLV+YGRLF+SNPDL  R
Sbjct: 295 LGSEEEEARLMRTLRNAYQGTFICSGGYTRELGIEAVAQGDADLVSYGRLFISNPDLVMR 354

Query: 313 FEIGAPLNKYIRDTFYLSDPVIGYTDYPFL 224
            ++ APLNKY R TFY  DPV+GYTDYPFL
Sbjct: 355 IKLNAPLNKYNRKTFYTQDPVVGYTDYPFL 384



 Score = 34.7 bits (78), Expect(2) = 6e-30
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
 Frame = -3

Query: 626 RLSPFASYSEASDSNPEALGLYMAHALNKF------GILYCHMVEPR 504
           R+SP   + +A DSNP +LGL +   LNK        + Y H+ +PR
Sbjct: 237 RVSPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPR 283



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>OPR3_ARATH (Q9FUP0) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)|
           (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase
           3) (Delayed dehiscence 1) (AtOPR3)
          Length = 391

 Score =  102 bits (255), Expect(2) = 1e-25
 Identities = 47/89 (52%), Positives = 64/89 (71%)
 Frame = -1

Query: 490 GEKFETPHSLRPIRDAFKGTFIVAGGYDRDDGNKAIADGYADLVAYGRLFLSNPDLPRRF 311
           G   E    ++ +R A+ GTF+ +GG++++ G +A+  G ADLV+YGRLF++NPDL  RF
Sbjct: 297 GSDEEEAKLMKSLRMAYNGTFMSSGGFNKELGMQAVQQGDADLVSYGRLFIANPDLVSRF 356

Query: 310 EIGAPLNKYIRDTFYLSDPVIGYTDYPFL 224
           +I   LNKY R TFY  DPV+GYTDYPFL
Sbjct: 357 KIDGELNKYNRKTFYTQDPVVGYTDYPFL 385



 Score = 33.1 bits (74), Expect(2) = 1e-25
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
 Frame = -3

Query: 626 RLSPFASYSEASDSNPEALGLYMAHALNKF------GILYCHMVEPRDGEY 492
           R+SP   + +A+DS+P +LGL +   LNK        + Y H+ +PR   Y
Sbjct: 238 RVSPAIDHLDATDSDPLSLGLAVVGMLNKLQGVNGSKLAYLHVTQPRYHAY 288



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>OYEB_SCHPO (Q09671) Putative NADPH dehydrogenase C5H10.10 (EC 1.6.99.1) (Old|
           yellow enzyme homolog)
          Length = 392

 Score = 70.9 bits (172), Expect = 3e-12
 Identities = 43/97 (44%), Positives = 57/97 (58%)
 Frame = -1

Query: 517 WWNHGMVNIGEKFETPHSLRPIRDAFKGTFIVAGGYDRDDGNKAIADGYADLVAYGRLFL 338
           +WN G V+I ++  T       ++ +   FI AGG+DRD   + +A+    LVA+GR FL
Sbjct: 291 YWN-GHVHITQEKNT----LIYKNLWGDPFITAGGHDRDSAIQ-MAEQENTLVAFGRYFL 344

Query: 337 SNPDLPRRFEIGAPLNKYIRDTFYLSDPVIGYTDYPF 227
           SNPDLP R +   PLNK+ R TFY      GY DYPF
Sbjct: 345 SNPDLPFRLKYNLPLNKWDRATFYTKMSPKGYIDYPF 381



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>OYEA_SCHPO (Q09670) Putative NADPH dehydrogenase C5H10.04 (EC 1.6.99.1) (Old|
           yellow enzyme homolog)
          Length = 382

 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 37/72 (51%), Positives = 47/72 (65%)
 Frame = -1

Query: 442 FKGTFIVAGGYDRDDGNKAIADGYADLVAYGRLFLSNPDLPRRFEIGAPLNKYIRDTFYL 263
           +KG FI AGGYD +   +A A+    LVA+GR F++NPDL  R +   PLNK+ R +FYL
Sbjct: 304 WKGPFITAGGYDPETAVQA-ANERGVLVAFGRNFIANPDLVFRIKHHIPLNKWDRSSFYL 362

Query: 262 SDPVIGYTDYPF 227
                GYTDYPF
Sbjct: 363 PKTEKGYTDYPF 374



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>NEMA_ECOLI (P77258) N-ethylmaleimide reductase (EC 1.-.-.-) (N-ethylmaleimide|
           reducing enzyme)
          Length = 365

 Score = 54.3 bits (129), Expect(2) = 3e-11
 Identities = 31/77 (40%), Positives = 40/77 (51%)
 Frame = -1

Query: 454 IRDAFKGTFIVAGGYDRDDGNKAIADGYADLVAYGRLFLSNPDLPRRFEIGAPLNKYIRD 275
           +R  F G  I AG Y  +     I  G  D VA+GR +++NPDL  R +  A LN    +
Sbjct: 290 VRARFHGPIIGAGAYTVEKAETLIGKGLIDAVAFGRDWIANPDLVARLQRKAELNPQRAE 349

Query: 274 TFYLSDPVIGYTDYPFL 224
           +FY      GYTDYP L
Sbjct: 350 SFY-GGGAEGYTDYPTL 365



 Score = 33.5 bits (75), Expect(2) = 3e-11
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -3

Query: 626 RLSPFASYSEASDS-NPEALGLYMAHALNKFGILYCHMVEP 507
           R+SP  ++    +  N EA  LY+   L K GI Y HM EP
Sbjct: 234 RVSPIGTFQNTDNGPNEEADALYLIEQLGKRGIAYLHMSEP 274



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>OYE3_YEAST (P41816) NADPH dehydrogenase 3 (EC 1.6.99.1) (Old yellow enzyme 3)|
          Length = 399

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 35/74 (47%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
 Frame = -1

Query: 442 FKGTFIVAGGYDRDDGNKAIADGYAD---LVAYGRLFLSNPDLPRRFEIGAPLNKYIRDT 272
           +KG  I AG Y      + + +   D   L+ YGR F+SNPDL  R E G PLNKY R T
Sbjct: 316 WKGPIIRAGNYALHP--EVVREQVKDPRTLIGYGRFFISNPDLVYRLEEGLPLNKYDRST 373

Query: 271 FYLSDPVIGYTDYP 230
           FY      GYTDYP
Sbjct: 374 FYTMS-AEGYTDYP 386



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>OYE2_YEAST (Q03558) NADPH dehydrogenase 2 (EC 1.6.99.1) (Old yellow enzyme 2)|
          Length = 399

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 28/45 (62%), Positives = 30/45 (66%)
 Frame = -1

Query: 364 LVAYGRLFLSNPDLPRRFEIGAPLNKYIRDTFYLSDPVIGYTDYP 230
           L+ YGR F+SNPDL  R E G PLNKY RDTFY      GY DYP
Sbjct: 343 LIGYGRFFISNPDLVDRLEKGLPLNKYDRDTFYKMS-AEGYIDYP 386



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>OYE1_SACPS (Q02899) NADPH dehydrogenase 1 (EC 1.6.99.1) (Old yellow enzyme 1)|
          Length = 399

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 28/45 (62%), Positives = 30/45 (66%)
 Frame = -1

Query: 364 LVAYGRLFLSNPDLPRRFEIGAPLNKYIRDTFYLSDPVIGYTDYP 230
           L+ YGR F+SNPDL  R E G PLNKY RDTFY      GY DYP
Sbjct: 343 LIGYGRFFISNPDLVDRLEKGLPLNKYDRDTFYQMS-AHGYIDYP 386



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>KYE1_KLULA (P40952) NADPH dehydrogenase 1 (EC 1.6.99.1) (Old yellow enzyme 1)|
          Length = 398

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
 Frame = -1

Query: 454 IRDAFKGTFIVAGGYDRDDGNKAIADGYAD--LVAYGRLFLSNPDLPRRFEIGAPLNKYI 281
           +   +KG  +  G Y  D  + AI D      L+ YGR F++NPDL  R E G PLN+Y 
Sbjct: 312 VYSVWKGNVLRVGNYALDP-DAAITDSKNPNTLIGYGRAFIANPDLVERLEKGLPLNQYD 370

Query: 280 RDTFYLSDPVIGYTDYP 230
           R +FY      GY DYP
Sbjct: 371 RPSFYKMS-AEGYIDYP 386



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>OPRL2_ARATH (Q9C5W1) Putative 12-oxophytodienoate reductase-like protein 2 (EC|
           1.3.1.-)
          Length = 269

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 22/32 (68%), Positives = 26/32 (81%)
 Frame = -3

Query: 626 RLSPFASYSEASDSNPEALGLYMAHALNKFGI 531
           RLSPFA Y E+ DSNPEALGLY+  A+NK G+
Sbjct: 227 RLSPFADYMESGDSNPEALGLYLVQAMNKHGM 258



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>EBP1_CANAL (P43084) Probable NADPH dehydrogenase (EC 1.6.99.1)|
           (Estrogen-binding protein) (EBP)
          Length = 406

 Score = 46.2 bits (108), Expect = 8e-05
 Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
 Frame = -1

Query: 442 FKGTFIVAGGY--DRDDGNKAIADGYAD--LVAYGRLFLSNPDLPRRFEIGAPLNKYIRD 275
           +KG FI AG Y  D  +    I D   D  ++ + R F SNPDL  + ++G PLN Y R+
Sbjct: 321 WKGNFIRAGNYTYDAPEFKTLINDLKNDRSIIGFSRFFTSNPDLVEKLKLGKPLNYYNRE 380

Query: 274 TFY 266
            FY
Sbjct: 381 EFY 383



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>FRMD6_MOUSE (Q8C0V9) FERM domain-containing protein 6|
          Length = 622

 Score = 34.3 bits (77), Expect = 0.31
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -1

Query: 196 GMNPSHPHQIVHLMYQYYVKGIRSLISMLM*SYVYWHGMDKMCNHHCNLR 47
           G++   P  I+H   QYYV+  + +   +   Y YWH   ++ +  C LR
Sbjct: 99  GIDQFGPPMIIHFRVQYYVENGKLISDRIARYYYYWHLRKQVLHSQCVLR 148



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>FRMD6_HUMAN (Q96NE9) FERM domain-containing protein 6|
          Length = 622

 Score = 34.3 bits (77), Expect = 0.31
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = -1

Query: 196 GMNPSHPHQIVHLMYQYYVKGIRSLISMLM*SYVYWHGMDKMCNHHCNLR 47
           G++   P  I+H   QYYV+  R +       Y YWH   ++ +  C LR
Sbjct: 99  GIDQFGPPMIIHFRVQYYVENGRLISDRAARYYYYWHLRKQVLHSQCVLR 148



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>FRMD6_RAT (Q8VII0) FERM domain-containing protein 6 (FERM domain-containing|
           protein 163SCII) (Fragment)
          Length = 327

 Score = 34.3 bits (77), Expect = 0.31
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -1

Query: 196 GMNPSHPHQIVHLMYQYYVKGIRSLISMLM*SYVYWHGMDKMCNHHCNLR 47
           G++   P  I+H   QYYV+  + +   +   Y YWH   ++ +  C LR
Sbjct: 91  GIDQFGPPMIIHFRVQYYVENGKLISDRIARYYYYWHLRKQVLHSQCVLR 140



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>MANBA_CAEEL (Q93324) Probable beta-mannosidase precursor (EC 3.2.1.25)|
           (Mannanase) (Mannase)
          Length = 900

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +1

Query: 451 LWGEDYGEFQTFHQYSPSRGSTMWQ*RIPNLFSACAMYRPRASGFESDASE 603
           +WG  + E   F+ Y+  +G  +WQ    +L  ACA+Y P    F  +A E
Sbjct: 395 VWGGGFYESNHFYYYASKKGILVWQ----DLMFACALY-PTTEEFIQNAEE 440



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>ALF1_TREDE (Q73QV3) Fructose-bisphosphate aldolase class 1 (EC 4.1.2.13)|
           (Fructose-biphosphate aldolase class I) (FBP aldolase)
          Length = 295

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
 Frame = -1

Query: 424 VAGGYDRDDGNKAIADGYADLVAYGR-----LFLSNPDLPRRFEIGAPLNKYIRDTFYLS 260
           ++GGY RDD NK +A     + ++ R     LF S  D     E  A L K I+  +  S
Sbjct: 238 LSGGYSRDDANKLLAKNRGMIASFSRALAEGLFASQSDA----EFNATLEKTIKGVYEAS 293



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>ZSWM4_HUMAN (Q9H7M6) Zinc finger SWIM domain-containing protein 4|
          Length = 989

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 13/39 (33%), Positives = 25/39 (64%)
 Frame = -2

Query: 579 RSSRPIHGTCTEQIWNSLLPHGGTTGW*ILVKSLKLPIV 463
           R S P+H TC   ++ +LLPH     + + +++++LPI+
Sbjct: 537 RESVPMH-TCARYLFTALLPHDPDLAYRLALRAMRLPIL 574



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>ZSWM4_MOUSE (Q8C7B8) Zinc finger SWIM domain-containing protein 4|
          Length = 1101

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 12/39 (30%), Positives = 25/39 (64%)
 Frame = -2

Query: 579 RSSRPIHGTCTEQIWNSLLPHGGTTGW*ILVKSLKLPIV 463
           R S P+H TC   ++ +LLPH     + + +++++LP++
Sbjct: 649 RESVPMH-TCARYLFTALLPHDPDLAFRLALRAMRLPVL 686



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>PRI1_YEAST (P10363) DNA primase small subunit (EC 2.7.7.-) (DNA primase 48 kDa|
           subunit) (p48)
          Length = 409

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = -1

Query: 469 HSLRPIRDAFKGTFIVA---GGYDRDDGNKAIADGYADLVAYGRLFLSNPDLPRRFEIGA 299
           HS +P RD     F +A   G Y R +   ++ D  A +        +NPD   RFEIGA
Sbjct: 34  HSPKPSRDMINREFAMAFRSGAYKRYNSFNSVQDFKAQIEK------ANPD---RFEIGA 84

Query: 298 PLNKYIRD 275
             NK  R+
Sbjct: 85  IYNKPPRE 92



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>TAF4B_HUMAN (Q92750) Transcription initiation factor TFIID 105 kDa subunit|
           (TAFII-105) (TAFII105) (Fragment)
          Length = 801

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +2

Query: 443 SIPYGAKTMGSFKLFTNIHHPVVPPCGNREFQICSV-HVPCIGLELLGLSRMPLNS 607
           S P G  T  S K   ++ H V  P G  E Q+ ++ H   + ++  G   MP+N+
Sbjct: 450 SQPAGIPTGSSSKQLFSLFHVVQQPSGGNEKQVTTISHSSTLTIQKCGQKTMPVNT 505



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>Y4618_METAC (Q8THA2) UPF0313 protein MA4618|
          Length = 742

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
 Frame = -1

Query: 454 IRDAFKGTFIVAGG------------YDRDDGNKAI-ADGYADLVAYGRLFLSNPDLPRR 314
           I++AF    IV GG            Y  D   +AI AD  ADLV YG   L   ++ +R
Sbjct: 245 IKEAFPNVPIVLGGIEASLRRFAHYDYLSDKVRQAILADAPADLVVYGMGELQIVEIAKR 304

Query: 313 FEIGAPLNKYIRD 275
            + G  + K IRD
Sbjct: 305 LQAGEDIRK-IRD 316


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,123,246
Number of Sequences: 219361
Number of extensions: 2135261
Number of successful extensions: 5754
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 5591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5752
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5767334219
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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