ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd21l11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK102440.1| Oryza sativa (japonica cultivar-group) cDNA clon... 406 e-110
2gb|AC174930.1| Oryza sativa (japonica cultivar-group) BAC clone ... 406 e-110
3gb|AY921642.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR5... 167 6e-38
4gb|BT018936.1| Zea mays clone Contig79.F mRNA sequence 143 8e-31
5dbj|AK061926.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 2e-25
6gb|AF005237.1|AF005237 Catharanthus roseus old-yellow-enzyme hom... 60 9e-06
7dbj|AB104740.1| Pisum sativum PsOPR5 mRNA for hypothetical prote... 52 0.002
8dbj|AB095742.1| Pisum sativum OPR5 gene for 12-oxophytodienoic a... 52 0.002
9emb|AL021330.1|HS244F1 Human DNA sequence from clone RP1-244F1 o... 46 0.14
10emb|CR933104.2| Medicago truncatula chromosome 5 clone mth2-25b3... 44 0.55
11gb|AC068668.10| Homo sapiens chromosome 8, clone RP11-574K13, co... 44 0.55
12gb|AC025856.13| Homo sapiens chromosome 8, clone RP11-430K7, com... 44 0.55
13gb|AC022709.7| Homo sapiens chromosome 8, clone RP11-88H1, compl... 44 0.55
14gb|AC068349.6| Homo sapiens chromosome 8, clone RP11-696J24, com... 44 0.55
15gb|AC005601.1| Homo sapiens chromosome 5, BAC clone 343g16 (LBNL... 42 2.2
16gb|AC121144.11| Mus musculus chromosome 3, clone RP24-202D19, co... 42 2.2
17gb|AC122469.4| Mus musculus chromosome 6 clone RP24-318I5, compl... 42 2.2
18gb|AC127827.7| Rattus norvegicus 4 BAC CH230-314M17 (Children's ... 42 2.2
19ref|XM_710982.1| Candida albicans SC5314 hypothetical protein (C... 42 2.2
20gb|AC098707.2| Mus musculus BAC clone RP23-1I13 from 18, complet... 42 2.2
21gb|AY436590.1| Homo sapiens nuclear receptor subfamily 3, group ... 42 2.2
22gb|AC136717.10| Mus musculus chromosome 7, clone RP23-48C24, com... 42 2.2
23gb|AC091925.3| Homo sapiens chromosome 5 clone RP11-278J6, compl... 42 2.2
24gb|AC012634.8| Homo sapiens chromosome 5 clone CTD-2185H17, comp... 42 2.2
25gb|AC096646.1| Homo sapiens BAC clone RP11-2F5 from 2, complete ... 42 2.2
26dbj|AB095739.1| Pisum sativum OPR2 gene for 12-oxophytodienoic a... 42 2.2
27gb|AC146598.4| Mus musculus BAC clone RP24-129K7 from 6, complet... 42 2.2
28gb|M81888.1|PVRSEQ Parvovirus LuII DNA sequence 42 2.2
29dbj|AB044940.1| Pisum sativum OPDAR mRNA for 12-oxophytodienoic ... 42 2.2
30ref|NM_105364.1| Arabidopsis thaliana kinase AT1G66930 mRNA, com... 40 8.6
31ref|NM_105370.1| Arabidopsis thaliana ATP binding / kinase/ prot... 40 8.6
32gb|AC102135.12| Mus musculus chromosome 18, clone RP23-253J5, co... 40 8.6
33gb|AC149571.3| Rhinolophus ferrumequinum clone VMRC7-305L23, com... 40 8.6
34emb|CT009527.5| Mouse DNA sequence from clone RP23-25D11 on chro... 40 8.6
35gb|AC007152.9| Arabidopsis thaliana chromosome I BAC F1O19 genom... 40 8.6
36emb|AL354891.11| Human DNA sequence from clone RP11-44I7 on chro... 40 8.6
37emb|CR548622.8| Zebrafish DNA sequence from clone DKEY-189A9 in ... 40 8.6
38gb|AC159252.3| Mus musculus BAC clone RP24-170P9 from chromosome... 40 8.6
39gb|AC120549.22| Mus musculus chromosome 1, clone RP23-172L16, co... 40 8.6
40gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold 40 8.6
41gb|AC083891.4|AC083891 Arabidopsis thaliana chromosome 1 BAC T4O... 40 8.6
42gb|AC154220.1| Mus musculus BAC clone RP24-364C6 from chromosome... 40 8.6
43gb|AC104684.3| Homo sapiens BAC clone RP11-1N7 from 2, complete ... 40 8.6
44dbj|AB108499.1| Lithospermum erythrorhizon mRNA for LEDI-5c prot... 40 8.6
45gb|AC154856.2| Mus musculus BAC clone RP23-20C2 from 13, complet... 40 8.6
46gb|AC107746.9| Mus musculus chromosome 1, clone RP23-311K2, comp... 40 8.6
47gb|AC002507.1|AC002507 Human Cosmid g5129z132 from 7q31.3, compl... 40 8.6
48gb|AC117439.5| Homo sapiens 3 BAC RP11-183P11 (Roswell Park Canc... 40 8.6 
>dbj|AK102440.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093L12, full
            insert sequence
          Length = 2146

 Score =  406 bits (205), Expect = e-110
 Identities = 377/433 (87%), Gaps = 1/433 (0%)
 Strand = Plus / Minus

                                                                        
Query: 196  ctgaaaggctcatctagacatcggacggcagaaatgggtagtcagtgtatccaataactg 255
            ||||||||| ||| |||||||| || || |||||||||||||||||||||||||||||||
Sbjct: 1367 ctgaaaggcacatttagacatctgatggaagaaatgggtagtcagtgtatccaataactg 1308

                                                                        
Query: 256  gatcggagaggtagaaagtatctcttatgtacttgttgagaggagcacctatttcaaacc 315
            |||| |||| ||||||||| |||||  |||| ||||||||||||||| ||||||||||||
Sbjct: 1307 gatcagagatgtagaaagtctctctgttgtatttgttgagaggagcatctatttcaaacc 1248

                                                                        
Query: 316  tccgaggcaagtcaggattggataaaaacaagcgcccatatgctaccaagtcagcatagc 375
            ||  |||||| |||||||| || ||||||||||||||||| || ||||| |||| ||| |
Sbjct: 1247 tctcaggcaaatcaggattagacaaaaacaagcgcccataagcaaccaaatcagtatatc 1188

                                                                        
Query: 376  catcggcgattgctttatttccatcatccctgtcgtatcccccagctacaataaatgttc 435
            ||  || || ||||||||||||||| ||| | | ||| || |||||  ||||||| ||||
Sbjct: 1187 cagtggagactgctttatttccatcctccttattgtagccaccagcagcaataaacgttc 1128

                                                                        
Query: 436  ccttaaaagcatcccttatggggcgaagactatggggagtttcaaacttttcaccaatat 495
            |||| ||||||||||| || || |||||||||||||| |||||||||||||||||||  |
Sbjct: 1127 ccttgaaagcatccctgattggacgaagactatggggggtttcaaacttttcaccaagct 1068

                                                                        
Query: 496  tcaccatcccgtggttccaccatgtggcaatagagaattccaaatttgttcagtgcatgt 555
            | ||||| |||||| ||||||||||| |||||||| || ||||| ||||| ||||||| |
Sbjct: 1067 ttaccat-ccgtggctccaccatgtgacaatagaggataccaaacttgtttagtgcattt 1009

                                                                        
Query: 556  gccatgtataggcctagagcttctgggtttgagtcggatgcctctgaatagctcgcaaac 615
            ||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||| 
Sbjct: 1008 gccatgtataggcctagagcttctgggtttgagtctgctgcctctgaatagctggcaaag 949

                         
Query: 616  ggtgagagcctta 628
            ||||| |||||||
Sbjct: 948  ggtgacagcctta 936
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>gb|AC174930.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBa0043H01, from
            chromosome 4, complete sequence
          Length = 15426

 Score =  406 bits (205), Expect = e-110
 Identities = 377/433 (87%), Gaps = 1/433 (0%)
 Strand = Plus / Plus

                                                                        
Query: 196  ctgaaaggctcatctagacatcggacggcagaaatgggtagtcagtgtatccaataactg 255
            ||||||||| ||| |||||||| || || |||||||||||||||||||||||||||||||
Sbjct: 4025 ctgaaaggcacatttagacatctgatggaagaaatgggtagtcagtgtatccaataactg 4084

                                                                        
Query: 256  gatcggagaggtagaaagtatctcttatgtacttgttgagaggagcacctatttcaaacc 315
            |||| |||| ||||||||| |||||  |||| ||||||||||||||| ||||||||||||
Sbjct: 4085 gatcagagatgtagaaagtctctctgttgtatttgttgagaggagcatctatttcaaacc 4144

                                                                        
Query: 316  tccgaggcaagtcaggattggataaaaacaagcgcccatatgctaccaagtcagcatagc 375
            ||  |||||| |||||||| || ||||||||||||||||| || ||||| |||| ||| |
Sbjct: 4145 tctcaggcaaatcaggattagacaaaaacaagcgcccataagcaaccaaatcagtatatc 4204

                                                                        
Query: 376  catcggcgattgctttatttccatcatccctgtcgtatcccccagctacaataaatgttc 435
            ||  || || ||||||||||||||| ||| | | ||| || |||||  ||||||| ||||
Sbjct: 4205 cagtggagactgctttatttccatcctccttattgtagccaccagcagcaataaacgttc 4264

                                                                        
Query: 436  ccttaaaagcatcccttatggggcgaagactatggggagtttcaaacttttcaccaatat 495
            |||| ||||||||||| || || |||||||||||||| |||||||||||||||||||  |
Sbjct: 4265 ccttgaaagcatccctgattggacgaagactatggggggtttcaaacttttcaccaagct 4324

                                                                        
Query: 496  tcaccatcccgtggttccaccatgtggcaatagagaattccaaatttgttcagtgcatgt 555
            | ||||| |||||| ||||||||||| |||||||| || ||||| ||||| ||||||| |
Sbjct: 4325 ttaccat-ccgtggctccaccatgtgacaatagaggataccaaacttgtttagtgcattt 4383

                                                                        
Query: 556  gccatgtataggcctagagcttctgggtttgagtcggatgcctctgaatagctcgcaaac 615
            ||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||| 
Sbjct: 4384 gccatgtataggcctagagcttctgggtttgagtctgctgcctctgaatagctggcaaag 4443

                         
Query: 616  ggtgagagcctta 628
            ||||| |||||||
Sbjct: 4444 ggtgacagcctta 4456
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>gb|AY921642.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR5) mRNA, complete cds
          Length = 1533

 Score =  167 bits (84), Expect = 6e-38
 Identities = 325/404 (80%), Gaps = 1/404 (0%)
 Strand = Plus / Minus

                                                                        
Query: 225  agaaatgggtagtcagtgtatccaataactggatcggagaggtagaaagtatctcttatg 284
            ||||||||||||||||||||||||| ||| ||||| | || ||| || || |||||  ||
Sbjct: 1269 agaaatgggtagtcagtgtatccaacaaccggatcagggatgtaaaacgtgtctctgttg 1210

                                                                        
Query: 285  tacttgttgagaggagcacctatttcaaacctccgaggcaagtcaggattggataaaaac 344
            |||||||| || |||||  ||| ||||||||||||||||| ||||||||| |  || |||
Sbjct: 1209 tacttgttaaggggagcgtctacttcaaacctccgaggcaggtcaggattagccaagaac 1150

                                                                        
Query: 345  aagcgcccatatgctaccaagtcagcatagccatcggcgattgctttatttccatcatcc 404
            ||||||||  | || ||||| |||||||| |||  || ||| ||   ||||||||| |||
Sbjct: 1149 aagcgcccgaacgcgaccaaatcagcatacccagtggagatcgcgcgatttccatcctcc 1090

                                                                        
Query: 405  ctgtcgtatcccccagctacaataaatgttcccttaaaagcatcccttatggggcgaaga 464
            ||| |||| || || || || || || |||||| | ||||| |||||||| |||||||| 
Sbjct: 1089 ctgccgtagccgccggcaacgatgaacgttcccctgaaagcgtcccttatcgggcgaagg 1030

                                                                        
Query: 465  ctatggggagtttcaaacttttcaccaatattcaccatcccgtggttccaccatgtggca 524
            || | ||| ||||| ||||||||||| |  |||||||| ||| || ||||||||||||||
Sbjct: 1029 ctgtagggggtttcgaacttttcaccgagtttcaccat-ccgcggctccaccatgtggca 971

                                                                        
Query: 525  atagagaattccaaatttgttcagtgcatgtgccatgtataggcctagagcttctgggtt 584
             |||||||| || || | |||||| || |  |||||||| ||||| |||||||| |||| 
Sbjct: 970  gtagagaatcccgaactcgttcagcgcgttcgccatgtacaggcccagagcttccgggtc 911

                                                        
Query: 585  tgagtcggatgcctctgaatagctcgcaaacggtgagagcctta 628
            |||||| |  ||||| || ||||| || || ||||| |||||||
Sbjct: 910  tgagtccggcgcctccgagtagctagcgaatggtgacagcctta 867
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>gb|BT018936.1| Zea mays clone Contig79.F mRNA sequence
          Length = 1257

 Score =  143 bits (72), Expect = 8e-31
 Identities = 322/404 (79%), Gaps = 1/404 (0%)
 Strand = Plus / Minus

                                                                        
Query: 225  agaaatgggtagtcagtgtatccaataactggatcggagaggtagaaagtatctcttatg 284
            ||||||||||||||||||||||||||||| ||||| | || ||| || || |||||  ||
Sbjct: 1100 agaaatgggtagtcagtgtatccaataaccggatcagggatgtaaaacgtgtctctgttg 1041

                                                                        
Query: 285  tacttgttgagaggagcacctatttcaaacctccgaggcaagtcaggattggataaaaac 344
            |||||||| || |||||  ||| ||| ||||||||||||| ||||||||| |  || |||
Sbjct: 1040 tacttgttaaggggagcgtctacttcgaacctccgaggcaggtcaggattagccaagaac 981

                                                                        
Query: 345  aagcgcccatatgctaccaagtcagcatagccatcggcgattgctttatttccatcatcc 404
            | ||||||  | || ||||| |||||||| |||  || ||| ||   ||| ||||| |||
Sbjct: 980  acgcgcccgaacgcgaccaaatcagcatacccagtggagatcgcgcgattcccatcctcc 921

                                                                        
Query: 405  ctgtcgtatcccccagctacaataaatgttcccttaaaagcatcccttatggggcgaaga 464
            ||| |||| || || || || || || |||||| | ||||| |||||||| |||||||| 
Sbjct: 920  ctgccgtagccgccggcaacgatgaacgttcccctgaaagcgtcccttatcgggcgaagg 861

                                                                        
Query: 465  ctatggggagtttcaaacttttcaccaatattcaccatcccgtggttccaccatgtggca 524
            || | ||| ||||| ||||||||||| |  |||||||| ||| || ||||||||||||||
Sbjct: 860  ctgtagggggtttcgaacttttcaccgagtttcaccat-ccgcggctccaccatgtggca 802

                                                                        
Query: 525  atagagaattccaaatttgttcagtgcatgtgccatgtataggcctagagcttctgggtt 584
             |||||||| || || | |||||| || |  |||||||| | ||| |||||||| |||| 
Sbjct: 801  gtagagaatcccgaactcgttcagcgcgttcgccatgtacatgcccagagcttccgggtc 742

                                                        
Query: 585  tgagtcggatgcctctgaatagctcgcaaacggtgagagcctta 628
            |||||| |  ||||| || ||||| || || ||||| |||||||
Sbjct: 741  tgagtccggcgcctccgagtagctagcgaatggtgacagcctta 698
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>dbj|AK061926.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-C04, full
           insert sequence
          Length = 515

 Score =  125 bits (63), Expect = 2e-25
 Identities = 96/107 (89%)
 Strand = Plus / Minus

                                                                       
Query: 196 ctgaaaggctcatctagacatcggacggcagaaatgggtagtcagtgtatccaataactg 255
           ||||||||| ||| |||||||| || || |||||||||||||||||||||||||||||||
Sbjct: 109 ctgaaaggcacatttagacatctgatggaagaaatgggtagtcagtgtatccaataactg 50

                                                          
Query: 256 gatcggagaggtagaaagtatctcttatgtacttgttgagaggagca 302
           |||| |||| ||||||||| |||||  |||| |||||||||||||||
Sbjct: 49  gatcagagatgtagaaagtctctctgttgtatttgttgagaggagca 3
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>gb|AF005237.1|AF005237 Catharanthus roseus old-yellow-enzyme homolog (CROYEH) mRNA, complete
            cds
          Length = 1170

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                        
Query: 225  agaaatgggtagtcagtgtatccaataactggatcggagaggtagaaagtatctcttatg 284
            |||||||| || ||||||||||||| ||| ||||| |  | ||||||||| ||||   ||
Sbjct: 1154 agaaatggataatcagtgtatccaagaacaggatctggtatgtagaaagtttctcggttg 1095

                              
Query: 285  tacttgttgagaggagca 302
            ||||||||||||||||||
Sbjct: 1094 tacttgttgagaggagca 1077
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>dbj|AB104740.1| Pisum sativum PsOPR5 mRNA for hypothetical protein, complete cds
          Length = 1107

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 65/78 (83%)
 Strand = Plus / Minus

                                                                        
Query: 225  agaaatgggtagtcagtgtatccaataactggatcggagaggtagaaagtatctcttatg 284
            ||||||||||||||||| || |||| ||||||||| ||   |||||| || || ||  | 
Sbjct: 1100 agaaatgggtagtcagtataaccaagaactggatcagaagtgtagaatgtctccctatta 1041

                              
Query: 285  tacttgttgagaggagca 302
            ||||||||||||||||||
Sbjct: 1040 tacttgttgagaggagca 1023
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>dbj|AB095742.1| Pisum sativum OPR5 gene for 12-oxophytodienoic acid 10, 11-reductase,
            complete cds
          Length = 2371

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 65/78 (83%)
 Strand = Plus / Minus

                                                                        
Query: 225  agaaatgggtagtcagtgtatccaataactggatcggagaggtagaaagtatctcttatg 284
            ||||||||||||||||| || |||| ||||||||| ||   |||||| || || ||  | 
Sbjct: 2162 agaaatgggtagtcagtataaccaagaactggatcagaagtgtagaatgtctccctatta 2103

                              
Query: 285  tacttgttgagaggagca 302
            ||||||||||||||||||
Sbjct: 2102 tacttgttgagaggagca 2085
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>emb|AL021330.1|HS244F1 Human DNA sequence from clone RP1-244F1 on chromosome 6q16.1-16.3
            Contains a nucleophosmin (nucleolar phosphoprotein B23,
            numatrin) (NPM1) (B23, NPM) pseudogene and a novel
            pseudogene, complete sequence
          Length = 84621

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 57   caatgatgattacacattttatc 79
            |||||||||||||||||||||||
Sbjct: 5505 caatgatgattacacattttatc 5483
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>emb|CR933104.2| Medicago truncatula chromosome 5 clone mth2-25b3, COMPLETE SEQUENCE
          Length = 117135

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 64/78 (82%)
 Strand = Plus / Plus

                                                                         
Query: 225   agaaatgggtagtcagtgtatccaataactggatcggagaggtagaaagtatctcttatg 284
             ||||| || ||||||||||| |||| ||| ||||| || | |||||| || || ||  | 
Sbjct: 74861 agaaagggatagtcagtgtaaccaacaaccggatcagaaatgtagaatgtctccctatta 74920

                               
Query: 285   tacttgttgagaggagca 302
             ||||||||||||||||||
Sbjct: 74921 tacttgttgagaggagca 74938
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>gb|AC068668.10| Homo sapiens chromosome 8, clone RP11-574K13, complete sequence
          Length = 69146

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 473  agtttcaaacttttcaccaata 494
            ||||||||||||||||||||||
Sbjct: 6584 agtttcaaacttttcaccaata 6563
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>gb|AC025856.13| Homo sapiens chromosome 8, clone RP11-430K7, complete sequence
          Length = 167416

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 473   agtttcaaacttttcaccaata 494
             ||||||||||||||||||||||
Sbjct: 90468 agtttcaaacttttcaccaata 90447
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>gb|AC022709.7| Homo sapiens chromosome 8, clone RP11-88H1, complete sequence
          Length = 164290

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 473   agtttcaaacttttcaccaata 494
             ||||||||||||||||||||||
Sbjct: 48835 agtttcaaacttttcaccaata 48856
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>gb|AC068349.6| Homo sapiens chromosome 8, clone RP11-696J24, complete sequence
          Length = 186012

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 473    agtttcaaacttttcaccaata 494
              ||||||||||||||||||||||
Sbjct: 141253 agtttcaaacttttcaccaata 141232
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>gb|AC005601.1| Homo sapiens chromosome 5, BAC clone 343g16 (LBNL H180), complete
             sequence
          Length = 38413

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 481   acttttcaccaatattcacca 501
             |||||||||||||||||||||
Sbjct: 16630 acttttcaccaatattcacca 16650
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>gb|AC121144.11| Mus musculus chromosome 3, clone RP24-202D19, complete sequence
          Length = 161989

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 192   attcctgaaaggctcatctagacat 216
             ||||||| |||||||||||||||||
Sbjct: 27648 attcctggaaggctcatctagacat 27672
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>gb|AC122469.4| Mus musculus chromosome 6 clone RP24-318I5, complete sequence
          Length = 181769

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 532  attccaaatttgttcagtgca 552
            |||||||||||||||||||||
Sbjct: 9946 attccaaatttgttcagtgca 9966
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>gb|AC127827.7| Rattus norvegicus 4 BAC CH230-314M17 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 48372

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 532   attccaaatttgttcagtgca 552
             |||||||||||||||||||||
Sbjct: 15496 attccaaatttgttcagtgca 15516
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>ref|XM_710982.1| Candida albicans SC5314 hypothetical protein (CaO19_7410), mRNA
          Length = 3105

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 62  atgattacacattttatccat 82
           |||||||||||||||||||||
Sbjct: 401 atgattacacattttatccat 421
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>gb|AC098707.2| Mus musculus BAC clone RP23-1I13 from 18, complete sequence
          Length = 230128

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 337    ataaaaacaagcgcccatatg 357
              |||||||||||||||||||||
Sbjct: 101372 ataaaaacaagcgcccatatg 101352
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>gb|AY436590.1| Homo sapiens nuclear receptor subfamily 3, group C, member 1
             (glucocorticoid receptor) (NR3C1) gene, complete cds
          Length = 127687

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 481   acttttcaccaatattcacca 501
             |||||||||||||||||||||
Sbjct: 90199 acttttcaccaatattcacca 90179
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>gb|AC136717.10| Mus musculus chromosome 7, clone RP23-48C24, complete sequence
          Length = 222854

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 479    aaacttttcaccaatattcac 499
              |||||||||||||||||||||
Sbjct: 172178 aaacttttcaccaatattcac 172198
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>gb|AC091925.3| Homo sapiens chromosome 5 clone RP11-278J6, complete sequence
          Length = 164668

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 481   acttttcaccaatattcacca 501
             |||||||||||||||||||||
Sbjct: 32886 acttttcaccaatattcacca 32906
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>gb|AC012634.8| Homo sapiens chromosome 5 clone CTD-2185H17, complete sequence
          Length = 237712

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 481   acttttcaccaatattcacca 501
             |||||||||||||||||||||
Sbjct: 68044 acttttcaccaatattcacca 68024
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>gb|AC096646.1| Homo sapiens BAC clone RP11-2F5 from 2, complete sequence
          Length = 156270

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 528   gagaattccaaatttgttcag 548
             |||||||||||||||||||||
Sbjct: 78328 gagaattccaaatttgttcag 78348
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>dbj|AB095739.1| Pisum sativum OPR2 gene for 12-oxophytodienoic acid 10,11-reductase,
            complete cds
          Length = 2220

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                        
Query: 234  tagtcagtgtatccaataactggatcggagaggtagaaagtatctcttatgtacttgttg 293
            |||||||| || |||||||||||||| ||   |||||| || || ||  | |||||||||
Sbjct: 2156 tagtcagtataaccaataactggatctgaagagtagaatgtctccctattatacttgttg 2097

                     
Query: 294  agaggagca 302
            |||||||||
Sbjct: 2096 agaggagca 2088
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>gb|AC146598.4| Mus musculus BAC clone RP24-129K7 from 6, complete sequence
          Length = 168141

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 532   attccaaatttgttcagtgca 552
             |||||||||||||||||||||
Sbjct: 88983 attccaaatttgttcagtgca 89003
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>gb|M81888.1|PVRSEQ Parvovirus LuII DNA sequence
          Length = 5135

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 100  atgactacatgagcattgaaa 120
            |||||||||||||||||||||
Sbjct: 4458 atgactacatgagcattgaaa 4478
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>dbj|AB044940.1| Pisum sativum OPDAR mRNA for 12-oxophytodienoic acid 10,
            11-reductase, complete cds
          Length = 1399

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                        
Query: 234  tagtcagtgtatccaataactggatcggagaggtagaaagtatctcttatgtacttgttg 293
            |||||||| || |||||||||||||| ||   |||||| || || ||  | |||||||||
Sbjct: 1108 tagtcagtataaccaataactggatctgaagagtagaatgtctccctattatacttgttg 1049

                     
Query: 294  agaggagca 302
            |||||||||
Sbjct: 1048 agaggagca 1040
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>ref|NM_105364.1| Arabidopsis thaliana kinase AT1G66930 mRNA, complete cds
          Length = 2025

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 160  ggtggacgatctgatgggga 179
            ||||||||||||||||||||
Sbjct: 1841 ggtggacgatctgatgggga 1822
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>ref|NM_105370.1| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein
            serine/threonine kinase/ protein-tyrosine kinase
            AT1G67000 mRNA, complete cds
          Length = 2614

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 160  ggtggacgatctgatgggga 179
            ||||||||||||||||||||
Sbjct: 2427 ggtggacgatctgatgggga 2408
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>gb|AC102135.12| Mus musculus chromosome 18, clone RP23-253J5, complete sequence
          Length = 204286

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    tcacacatacacttcttaaa 53
             ||||||||||||||||||||
Sbjct: 33814 tcacacatacacttcttaaa 33795
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>gb|AC149571.3| Rhinolophus ferrumequinum clone VMRC7-305L23, complete sequence
          Length = 190426

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   atgagcattgaaatcaatga 127
             ||||||||||||||||||||
Sbjct: 43627 atgagcattgaaatcaatga 43608
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>emb|CT009527.5| Mouse DNA sequence from clone RP23-25D11 on chromosome 13, complete
              sequence
          Length = 226804

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 122    caatgaccttattcctttaacata 145
              ||||||| ||||||||||||||||
Sbjct: 124797 caatgacattattcctttaacata 124774
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>gb|AC007152.9| Arabidopsis thaliana chromosome I BAC F1O19 genomic sequence, complete
             sequence
          Length = 90387

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   ggtggacgatctgatgggga 179
             ||||||||||||||||||||
Sbjct: 34107 ggtggacgatctgatgggga 34126



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 160  ggtggacgatctgatgggga 179
            ||||||||||||||||||||
Sbjct: 2588 ggtggacgatctgatgggga 2569
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>emb|AL354891.11| Human DNA sequence from clone RP11-44I7 on chromosome 13 Contains part
             of the gene for a novel protein (ortholog of rat putative
             four repeat ion channel), complete sequence
          Length = 103706

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 60    tgatgattacacattttatccata 83
             |||| |||||||||||||||||||
Sbjct: 65569 tgataattacacattttatccata 65592
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>emb|CR548622.8| Zebrafish DNA sequence from clone DKEY-189A9 in linkage group 11,
            complete sequence
          Length = 137993

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 46   ttcttaaattgcaatgatga 65
            ||||||||||||||||||||
Sbjct: 3151 ttcttaaattgcaatgatga 3170
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>gb|AC159252.3| Mus musculus BAC clone RP24-170P9 from chromosome 13, complete sequence
          Length = 168456

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 122    caatgaccttattcctttaacata 145
              ||||||| ||||||||||||||||
Sbjct: 143013 caatgacattattcctttaacata 143036
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>gb|AC120549.22| Mus musculus chromosome 1, clone RP23-172L16, complete sequence
          Length = 210516

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 433    ttcccttaaaagcatcccttatgg 456
              |||||||||||||||||| |||||
Sbjct: 208081 ttcccttaaaagcatcccctatgg 208104
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>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold
          Length = 1756392

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 108    atgagcattgaaatcaatga 127
              ||||||||||||||||||||
Sbjct: 659471 atgagcattgaaatcaatga 659452
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>gb|AC083891.4|AC083891 Arabidopsis thaliana chromosome 1 BAC T4O24 genomic sequence, complete
             sequence
          Length = 35116

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   ggtggacgatctgatgggga 179
             ||||||||||||||||||||
Sbjct: 13333 ggtggacgatctgatgggga 13352
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>gb|AC154220.1| Mus musculus BAC clone RP24-364C6 from chromosome 13, complete sequence
          Length = 175727

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 72     attttatccataccatgcca 91
              ||||||||||||||||||||
Sbjct: 156345 attttatccataccatgcca 156326
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>gb|AC104684.3| Homo sapiens BAC clone RP11-1N7 from 2, complete sequence
          Length = 129770

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 190    tcattcctgaaaggctcatctaga 213
              ||||| ||||||||||||||||||
Sbjct: 112697 tcattactgaaaggctcatctaga 112674
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>dbj|AB108499.1| Lithospermum erythrorhizon mRNA for LEDI-5c protein, complete cds
          Length = 1442

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 508 ggttccaccatgtggcaatagagaattccaaatttgttca 547
           ||||| ||||||||||| || || |||||| |||||||||
Sbjct: 842 ggttcaaccatgtggcagtaaaggattccatatttgttca 803
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>gb|AC154856.2| Mus musculus BAC clone RP23-20C2 from 13, complete sequence
          Length = 248953

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 72  attttatccataccatgcca 91
           ||||||||||||||||||||
Sbjct: 266 attttatccataccatgcca 247
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>gb|AC107746.9| Mus musculus chromosome 1, clone RP23-311K2, complete sequence
          Length = 202822

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 433    ttcccttaaaagcatcccttatgg 456
              |||||||||||||||||| |||||
Sbjct: 190848 ttcccttaaaagcatcccctatgg 190825
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>gb|AC002507.1|AC002507 Human Cosmid g5129z132 from 7q31.3, complete sequence
          Length = 41763

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    attgcaatgatgattacaca 72
             ||||||||||||||||||||
Sbjct: 32990 attgcaatgatgattacaca 33009
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>gb|AC117439.5| Homo sapiens 3 BAC RP11-183P11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 172676

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      aacttcttaatttgctttta 20
              ||||||||||||||||||||
Sbjct: 166637 aacttcttaatttgctttta 166656


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,777,405
Number of Sequences: 3902068
Number of extensions: 5777405
Number of successful extensions: 98827
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 98698
Number of HSP's gapped (non-prelim): 121
length of query: 628
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 605
effective length of database: 17,143,297,704
effective search space: 10371695110920
effective search space used: 10371695110920
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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