ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd21k18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NIFK_KLEPN (P09772) Nitrogenase molybdenum-iron protein beta cha... 29 5.3

>NIFK_KLEPN (P09772) Nitrogenase molybdenum-iron protein beta chain (EC|
           1.18.6.1) (Nitrogenase component I) (Dinitrogenase)
          Length = 520

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 18/47 (38%), Positives = 27/47 (57%)
 Frame = +3

Query: 111 QSRKIRLPSLNIVTNMEVWVQNFRALGTKRILNXIL*VAPDLSNSPS 251
           Q +  +LP LN+VT  E ++ NFR L  KR++  +  V   L + PS
Sbjct: 212 QGQPGKLPKLNLVTGFETYLGNFRVL--KRMMEQMA-VPCSLLSDPS 255


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,618,120
Number of Sequences: 219361
Number of extensions: 1139673
Number of successful extensions: 2592
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2592
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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