ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd21k04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT016916.1| Zea mays clone E04912701B03.c mRNA sequence 76 2e-10
2dbj|AK111940.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 4e-08
3dbj|AK102966.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 4e-08
4dbj|AK101918.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 4e-08
5gb|AC135918.3| Oryza sativa (japonica cultivar-group) chromosome... 56 1e-04
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
7gb|AC008936.6| Homo sapiens chromosome 5 clone CTD-2309I16, comp... 46 0.14
8gb|AC123052.4| Mus musculus chromosome 13 clone RP24-373D10, com... 44 0.54
9gb|AC157942.7| Mus musculus BAC clone RP24-118E2 from chromosome... 44 0.54
10emb|AL161492.2|ATCHRIV4 Arabidopsis thaliana DNA chromosome 4, c... 44 0.54
11gb|AC108215.4| Homo sapiens BAC clone RP11-630A13 from 4, comple... 44 0.54
12dbj|AK118227.1| Arabidopsis thaliana mRNA, clone: RAFL19-54-E16 44 0.54
13gb|AF104919.1|T15B16 Arabidopsis thaliana BAC T15B16 44 0.54
14ref|NM_001036457.1| Arabidopsis thaliana PP5 AT2G42810 (PP5) tra... 42 2.1
15ref|NM_129842.2| Arabidopsis thaliana PP5; phosphoprotein phosph... 42 2.1
16gb|AY182779.1| Arabidopsis thaliana type 5 protein serine/threon... 42 2.1
17gb|BT010180.1| Arabidopsis thaliana At2g42810/F7D19.19 mRNA, com... 42 2.1
18gb|AY080674.1| Arabidopsis thaliana putative phosphoprotein phos... 42 2.1
19gb|AC153153.4| Mus musculus BAC clone RP23-79G18 from chromosome... 42 2.1
20gb|AC117411.3| Homo sapiens 3 BAC RP11-55O2 (Roswell Park Cancer... 42 2.1
21gb|AC006931.6| Arabidopsis thaliana chromosome 2 clone F7D19 map... 42 2.1
22gb|AF419574.1|AF419574 Arabidopsis thaliana At2g42810/F7D19.19 m... 42 2.1
23dbj|AK221789.1| Arabidopsis thaliana mRNA for phosphoprotein pho... 42 2.1
24dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
25dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
26dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
27emb|BX820076.1|CNS0A9FI Arabidopsis thaliana Full-length cDNA Co... 42 2.1
28gb|AC147213.3| Pan troglodytes BAC clone RP43-127I22 from chromo... 42 2.1
29gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb00... 42 2.1
30dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
31dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
32dbj|AP003046.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
33dbj|AP004346.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
34dbj|AK104672.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
35dbj|AK099297.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
36dbj|AK061342.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
37gb|AC016968.24| Homo sapiens 3 BAC RP11-59J16 (Roswell Park Canc... 42 2.1
38gb|AC174762.1| Gasterosteus aculeatus clone VMRC28-105C03, compl... 42 2.1
39gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.1
40gb|AF032879.1|AF032879 Arabidopsis thaliana protein phosphatase ... 42 2.1
41gb|AC112266.6| Mus musculus BAC clone RP23-422B6 from 13, comple... 42 2.1
42ref|XM_427187.1| PREDICTED: Gallus gallus similar to hypothetica... 40 8.5
43ref|XM_417632.1| PREDICTED: Gallus gallus similar to hypothetica... 40 8.5
44ref|XM_457487.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 8.5
45gb|AC146147.3| Pan troglodytes BAC clone RP43-2J16 from 7, compl... 40 8.5
46gb|AC122753.11| Mus musculus chromosome 5, clone RP24-492O4, com... 40 8.5
47emb|BX936302.13| Zebrafish DNA sequence from clone CH211-191C10 ... 40 8.5
48emb|AJ566504.1|TCA566504 Theobroma cacao microsatellite, clone m... 40 8.5
49gb|AC004594.2| Homo sapiens PAC clone RP5-1101C3 from 7, complet... 40 8.5
50emb|CR936240.10| Zebrafish DNA sequence from clone DKEY-233K19 i... 40 8.5
51emb|AL606827.10| Human DNA sequence from clone RP11-90C4 on chro... 40 8.5
52emb|AL390785.15| Human DNA sequence from clone RP11-325N9 on chr... 40 8.5
53gb|AC079271.4| Homo sapiens chromosome 10 clone RP11-455I1, comp... 40 8.5
54emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS... 40 8.5
55emb|BX511222.10| Zebrafish DNA sequence from clone DKEY-250J7 in... 40 8.5
56emb|BX511148.7| Zebrafish DNA sequence from clone DKEY-174N20 in... 40 8.5
57gb|AC063962.11| Homo sapiens chromosome 10 clone RP11-222G7, com... 40 8.5
58gb|AC018511.5| Homo sapiens chromosome 10 clone RP11-77G23, comp... 40 8.5
59gb|S47716.1| Seoul virus 80-39 glycoprotein precusor gene, compl... 40 8.5
60dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
61emb|BX321919.10| Zebrafish DNA sequence from clone CH211-236B8, ... 40 8.5
62dbj|AP003848.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
63dbj|AP003712.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
64dbj|AK067261.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.5
65emb|CR352221.10| Zebrafish DNA sequence from clone DKEY-87M9 in ... 40 8.5
66emb|AL732330.14| Mouse DNA sequence from clone RP23-130L11 on ch... 40 8.5
67gb|L28755.1|PROAARA Providencia stuartii 2'-N-acetyltransferase ... 40 8.5
68emb|AL772183.5| Mouse DNA sequence from clone RP23-36D21 on chro... 40 8.5 
>gb|BT016916.1| Zea mays clone E04912701B03.c mRNA sequence
          Length = 607

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 75/86 (87%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                       
Query: 511 attggaacatccggaggaaattgtttgcataggccatcggcttgacatcaagggtgtgac 570
           |||| ||||||| |||||| || |||||||| ||||||||||| ||||| ||| |||| |
Sbjct: 348 attgaaacatcctgaggaagttatttgcatatgccatcggcttcacatc-aggatgtggc 406

                                     
Query: 571 actgctgagaaactaacaatatctgg 596
           || ||||||||| |||||||||||||
Sbjct: 407 acagctgagaaagtaacaatatctgg 432
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>dbj|AK111940.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-C04, full
            insert sequence
          Length = 1233

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 62/70 (88%), Gaps = 1/70 (1%)
 Strand = Plus / Minus

                                                                        
Query: 513  tggaacatccggaggaaattgtttgcataggccatcggcttgacatcaagggtgtgacac 572
            |||||||||| |||||| ||||| || ||||||||||||||||| || |||||||| |||
Sbjct: 1098 tggaacatcctgaggaagttgttcgcgtaggccatcggcttgacgtc-agggtgtggcac 1040

                      
Query: 573  tgctgagaaa 582
             |||||||||
Sbjct: 1039 cgctgagaaa 1030
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>dbj|AK102966.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115I22, full
            insert sequence
          Length = 1852

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 62/70 (88%), Gaps = 1/70 (1%)
 Strand = Plus / Minus

                                                                        
Query: 513  tggaacatccggaggaaattgtttgcataggccatcggcttgacatcaagggtgtgacac 572
            |||||||||| |||||| ||||| || ||||||||||||||||| || |||||||| |||
Sbjct: 1695 tggaacatcctgaggaagttgttcgcgtaggccatcggcttgacgtc-agggtgtggcac 1637

                      
Query: 573  tgctgagaaa 582
             |||||||||
Sbjct: 1636 cgctgagaaa 1627
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>dbj|AK101918.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071J02, full
            insert sequence
          Length = 1876

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 62/70 (88%), Gaps = 1/70 (1%)
 Strand = Plus / Minus

                                                                        
Query: 513  tggaacatccggaggaaattgtttgcataggccatcggcttgacatcaagggtgtgacac 572
            |||||||||| |||||| ||||| || ||||||||||||||||| || |||||||| |||
Sbjct: 1697 tggaacatcctgaggaagttgttcgcgtaggccatcggcttgacgtc-agggtgtggcac 1639

                      
Query: 573  tgctgagaaa 582
             |||||||||
Sbjct: 1638 cgctgagaaa 1629
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>gb|AC135918.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0115F21, complete sequence
          Length = 128493

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                         
Query: 513   tggaacatccggaggaaattgtttgcataggccatcggcttgac 556
             |||||||||| |||||| ||||| || |||||||||||||||||
Sbjct: 15636 tggaacatcctgaggaagttgttcgcgtaggccatcggcttgac 15593
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                           
Query: 513     tggaacatccggaggaaattgtttgcataggccatcggcttgac 556
               |||||||||| |||||| ||||| || |||||||||||||||||
Sbjct: 6455215 tggaacatcctgaggaagttgttcgcgtaggccatcggcttgac 6455172
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>gb|AC008936.6| Homo sapiens chromosome 5 clone CTD-2309I16, complete sequence
          Length = 56515

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 323   ctaaatcactgtgctagaaccag 345
             |||||||||||||||||||||||
Sbjct: 38458 ctaaatcactgtgctagaaccag 38480
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>gb|AC123052.4| Mus musculus chromosome 13 clone RP24-373D10, complete sequence
          Length = 175595

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 139    attttgtgtatgaaatgtatta 160
              ||||||||||||||||||||||
Sbjct: 112653 attttgtgtatgaaatgtatta 112632
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>gb|AC157942.7| Mus musculus BAC clone RP24-118E2 from chromosome 13, complete sequence
          Length = 173717

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 139   attttgtgtatgaaatgtatta 160
             ||||||||||||||||||||||
Sbjct: 39253 attttgtgtatgaaatgtatta 39232
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>emb|AL161492.2|ATCHRIV4 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 4
          Length = 198697

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 530    attgtttgcataggccatcggcttgacatc 559
              |||||||||||| ||||| |||||||||||
Sbjct: 114590 attgtttgcatatgccattggcttgacatc 114561
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>gb|AC108215.4| Homo sapiens BAC clone RP11-630A13 from 4, complete sequence
          Length = 166595

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 392   tgttgtagcaaaatatttgctg 413
             ||||||||||||||||||||||
Sbjct: 43439 tgttgtagcaaaatatttgctg 43418
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>dbj|AK118227.1| Arabidopsis thaliana mRNA, clone: RAFL19-54-E16
          Length = 1275

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 530  attgtttgcataggccatcggcttgacatc 559
            |||||||||||| ||||| |||||||||||
Sbjct: 1131 attgtttgcatatgccattggcttgacatc 1102
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>gb|AF104919.1|T15B16 Arabidopsis thaliana BAC T15B16
          Length = 90596

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 530   attgtttgcataggccatcggcttgacatc 559
             |||||||||||| ||||| |||||||||||
Sbjct: 79383 attgtttgcatatgccattggcttgacatc 79412
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>ref|NM_001036457.1| Arabidopsis thaliana PP5 AT2G42810 (PP5) transcript variant
            AT2G42810.2 mRNA, complete cds
          Length = 2158

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 70/85 (82%), Gaps = 1/85 (1%)
 Strand = Plus / Minus

                                                                        
Query: 515  gaacatccggaggaaattgtttgcataggccatcggcttgacatcaagggtgtgacactg 574
            |||||||| ||| || ||||||||||| ||||| ||||| |||||  || || | |||||
Sbjct: 1751 gaacatcctgagaaagttgtttgcatatgccataggcttcacatcc-ggatgaggcactg 1693

                                     
Query: 575  ctgagaaactaacaatatctggctt 599
            |||||||  ||||||| | ||||||
Sbjct: 1692 ctgagaatgtaacaatgtttggctt 1668
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>ref|NM_129842.2| Arabidopsis thaliana PP5; phosphoprotein phosphatase/ protein binding
            AT2G42810 (PP5) transcript variant AT2G42810.1 mRNA,
            complete cds
          Length = 2020

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 70/85 (82%), Gaps = 1/85 (1%)
 Strand = Plus / Minus

                                                                        
Query: 515  gaacatccggaggaaattgtttgcataggccatcggcttgacatcaagggtgtgacactg 574
            |||||||| ||| || ||||||||||| ||||| ||||| |||||  || || | |||||
Sbjct: 1613 gaacatcctgagaaagttgtttgcatatgccataggcttcacatcc-ggatgaggcactg 1555

                                     
Query: 575  ctgagaaactaacaatatctggctt 599
            |||||||  ||||||| | ||||||
Sbjct: 1554 ctgagaatgtaacaatgtttggctt 1530
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>gb|AY182779.1| Arabidopsis thaliana type 5 protein serine/threonine phosphatase 60
            kDa isoform mRNA, complete cds, alternatively spliced
          Length = 1617

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 70/85 (82%), Gaps = 1/85 (1%)
 Strand = Plus / Minus

                                                                        
Query: 515  gaacatccggaggaaattgtttgcataggccatcggcttgacatcaagggtgtgacactg 574
            |||||||| ||| || ||||||||||| ||||| ||||| |||||  || || | |||||
Sbjct: 1611 gaacatcctgagaaagttgtttgcatatgccataggcttcacatcc-ggatgaggcactg 1553

                                     
Query: 575  ctgagaaactaacaatatctggctt 599
            |||||||  ||||||| | ||||||
Sbjct: 1552 ctgagaatgtaacaatgtttggctt 1528
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>gb|BT010180.1| Arabidopsis thaliana At2g42810/F7D19.19 mRNA, complete cds
          Length = 1455

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 70/85 (82%), Gaps = 1/85 (1%)
 Strand = Plus / Minus

                                                                        
Query: 515  gaacatccggaggaaattgtttgcataggccatcggcttgacatcaagggtgtgacactg 574
            |||||||| ||| || ||||||||||| ||||| ||||| |||||  || || | |||||
Sbjct: 1449 gaacatcctgagaaagttgtttgcatatgccataggcttcacatcc-ggatgaggcactg 1391

                                     
Query: 575  ctgagaaactaacaatatctggctt 599
            |||||||  ||||||| | ||||||
Sbjct: 1390 ctgagaatgtaacaatgtttggctt 1366
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>gb|AY080674.1| Arabidopsis thaliana putative phosphoprotein phosphatase
           (At2g42810) mRNA, partial cds
          Length = 1311

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 70/85 (82%), Gaps = 1/85 (1%)
 Strand = Plus / Minus

                                                                       
Query: 515 gaacatccggaggaaattgtttgcataggccatcggcttgacatcaagggtgtgacactg 574
           |||||||| ||| || ||||||||||| ||||| ||||| |||||  || || | |||||
Sbjct: 974 gaacatcctgagaaagttgtttgcatatgccataggcttcacatcc-ggatgaggcactg 916

                                    
Query: 575 ctgagaaactaacaatatctggctt 599
           |||||||  ||||||| | ||||||
Sbjct: 915 ctgagaatgtaacaatgtttggctt 891
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>gb|AC153153.4| Mus musculus BAC clone RP23-79G18 from chromosome 13, complete sequence
          Length = 222383

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 446    gaaatgagttgagcacagaaa 466
              |||||||||||||||||||||
Sbjct: 152186 gaaatgagttgagcacagaaa 152166
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>gb|AC117411.3| Homo sapiens 3 BAC RP11-55O2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 124524

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 584   taacaatatctggctttaaat 604
             |||||||||||||||||||||
Sbjct: 82604 taacaatatctggctttaaat 82624
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>gb|AC006931.6| Arabidopsis thaliana chromosome 2 clone F7D19 map m551, complete
             sequence
          Length = 115310

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                          
Query: 515   gaacatccggaggaaattgtttgcataggccatcggcttgacatc 559
             |||||||| ||| || ||||||||||| ||||| ||||| |||||
Sbjct: 69404 gaacatcctgagaaagttgtttgcatatgccataggcttcacatc 69360
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>gb|AF419574.1|AF419574 Arabidopsis thaliana At2g42810/F7D19.19 mRNA, complete cds
          Length = 2014

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 70/85 (82%), Gaps = 1/85 (1%)
 Strand = Plus / Minus

                                                                        
Query: 515  gaacatccggaggaaattgtttgcataggccatcggcttgacatcaagggtgtgacactg 574
            |||||||| ||| || ||||||||||| ||||| ||||| |||||  || || | |||||
Sbjct: 1613 gaacatcctgagaaagttgtttgcatatgccataggcttcacatcc-ggatgaggcactg 1555

                                     
Query: 575  ctgagaaactaacaatatctggctt 599
            |||||||  ||||||| | ||||||
Sbjct: 1554 ctgagaatgtaacaatgtttggctt 1530
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>dbj|AK221789.1| Arabidopsis thaliana mRNA for phosphoprotein phosphatase like
           protein, partial cds, clone: RAFL21-79-J01
          Length = 755

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 70/85 (82%), Gaps = 1/85 (1%)
 Strand = Plus / Minus

                                                                       
Query: 515 gaacatccggaggaaattgtttgcataggccatcggcttgacatcaagggtgtgacactg 574
           |||||||| ||| || ||||||||||| ||||| ||||| |||||  || || | |||||
Sbjct: 344 gaacatcctgagaaagttgtttgcatatgccataggcttcacatcc-ggatgaggcactg 286

                                    
Query: 575 ctgagaaactaacaatatctggctt 599
           |||||||  ||||||| | ||||||
Sbjct: 285 ctgagaatgtaacaatgtttggctt 261
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 165      aatccacacaagcaatcaaga 185
                |||||||||||||||||||||
Sbjct: 14179964 aatccacacaagcaatcaaga 14179944
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 165      aatccacacaagcaatcaaga 185
                |||||||||||||||||||||
Sbjct: 11373902 aatccacacaagcaatcaaga 11373922



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 481     aaattggccagacaggttcagcct 504
               |||||||||||| |||||||||||
Sbjct: 5163951 aaattggccagaaaggttcagcct 5163928
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 524      gaggaaattgtttgcataggc 544
                |||||||||||||||||||||
Sbjct: 23376731 gaggaaattgtttgcataggc 23376751



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 165     aatccacacaagcaatcaaga 185
               |||||||||||||||||||||
Sbjct: 1323584 aatccacacaagcaatcaaga 1323564
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>emb|BX820076.1|CNS0A9FI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS71ZD05 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1780

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 70/85 (82%), Gaps = 1/85 (1%)
 Strand = Plus / Minus

                                                                        
Query: 515  gaacatccggaggaaattgtttgcataggccatcggcttgacatcaagggtgtgacactg 574
            |||||||| ||| || ||||||||||| ||||| ||||| |||||  || || | |||||
Sbjct: 1483 gaacatcctgagaaagttgtttgcatatgccataggcttcacatcc-ggatgaggcactg 1425

                                     
Query: 575  ctgagaaactaacaatatctggctt 599
            |||||||  ||||||| | ||||||
Sbjct: 1424 ctgagaatgtaacaatgtttggctt 1400
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>gb|AC147213.3| Pan troglodytes BAC clone RP43-127I22 from chromosome 7, complete
             sequence
          Length = 205208

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 138   cattttgtgtatgaaatgtat 158
             |||||||||||||||||||||
Sbjct: 38322 cattttgtgtatgaaatgtat 38302
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>gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb0006I13 chromosome 10,
             complete sequence
          Length = 142737

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 165   aatccacacaagcaatcaaga 185
             |||||||||||||||||||||
Sbjct: 52037 aatccacacaagcaatcaaga 52017
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>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1103C09
          Length = 163996

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 524    gaggaaattgtttgcataggc 544
              |||||||||||||||||||||
Sbjct: 102429 gaggaaattgtttgcataggc 102449
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>dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0037C04
          Length = 137879

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 165   aatccacacaagcaatcaaga 185
             |||||||||||||||||||||
Sbjct: 21635 aatccacacaagcaatcaaga 21615
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>dbj|AP003046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0445D12
          Length = 140952

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 165    aatccacacaagcaatcaaga 185
              |||||||||||||||||||||
Sbjct: 117238 aatccacacaagcaatcaaga 117218
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>dbj|AP004346.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0656C04
          Length = 143411

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 165   aatccacacaagcaatcaaga 185
             |||||||||||||||||||||
Sbjct: 74413 aatccacacaagcaatcaaga 74433
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>dbj|AK104672.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-F04, full
           insert sequence
          Length = 899

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 165 aatccacacaagcaatcaaga 185
           |||||||||||||||||||||
Sbjct: 804 aatccacacaagcaatcaaga 784
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>dbj|AK099297.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135H02, full
           insert sequence
          Length = 897

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 165 aatccacacaagcaatcaaga 185
           |||||||||||||||||||||
Sbjct: 802 aatccacacaagcaatcaaga 782
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>dbj|AK061342.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-E04, full
           insert sequence
          Length = 899

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 165 aatccacacaagcaatcaaga 185
           |||||||||||||||||||||
Sbjct: 804 aatccacacaagcaatcaaga 784
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>gb|AC016968.24| Homo sapiens 3 BAC RP11-59J16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 152586

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 275   cacagggacaagggcagaagg 295
             |||||||||||||||||||||
Sbjct: 29376 cacagggacaagggcagaagg 29356
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>gb|AC174762.1| Gasterosteus aculeatus clone VMRC28-105C03, complete sequence
          Length = 136351

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 371   ggtcacagcagcatctaaaat 391
             |||||||||||||||||||||
Sbjct: 73037 ggtcacagcagcatctaaaat 73017
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 165      aatccacacaagcaatcaaga 185
                |||||||||||||||||||||
Sbjct: 14188206 aatccacacaagcaatcaaga 14188186
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>gb|AF032879.1|AF032879 Arabidopsis thaliana protein phosphatase U (PPU) mRNA, partial cds
          Length = 1013

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 70/85 (82%), Gaps = 1/85 (1%)
 Strand = Plus / Minus

                                                                       
Query: 515 gaacatccggaggaaattgtttgcataggccatcggcttgacatcaagggtgtgacactg 574
           |||||||| ||| || ||||||||||| ||||| ||||| |||||  || || | |||||
Sbjct: 583 gaacatcctgagaaagttgtttgcatatgccataggcttcacatcc-ggatgaggcactg 525

                                    
Query: 575 ctgagaaactaacaatatctggctt 599
           |||||||  ||||||| | ||||||
Sbjct: 524 ctgagaatgtaacaatgtttggctt 500
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>gb|AC112266.6| Mus musculus BAC clone RP23-422B6 from 13, complete sequence
          Length = 190943

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 446   gaaatgagttgagcacagaaa 466
             |||||||||||||||||||||
Sbjct: 96591 gaaatgagttgagcacagaaa 96571
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>ref|XM_427187.1| PREDICTED: Gallus gallus similar to hypothetical protein LOC255104
           (LOC429634), partial mRNA
          Length = 334

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 362 ggcaggaggggtcacagcag 381
           ||||||||||||||||||||
Sbjct: 311 ggcaggaggggtcacagcag 292
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>ref|XM_417632.1| PREDICTED: Gallus gallus similar to hypothetical protein LOC255104
            (LOC419476), mRNA
          Length = 2279

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 362  ggcaggaggggtcacagcag 381
            ||||||||||||||||||||
Sbjct: 1805 ggcaggaggggtcacagcag 1786
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>ref|XM_457487.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0B12496g)
           partial mRNA
          Length = 882

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 14  ctgagcaaactaaacaataa 33
           ||||||||||||||||||||
Sbjct: 146 ctgagcaaactaaacaataa 127
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>gb|AC146147.3| Pan troglodytes BAC clone RP43-2J16 from 7, complete sequence
          Length = 167352

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 149    tgaaatgtattacaacaatc 168
              ||||||||||||||||||||
Sbjct: 127427 tgaaatgtattacaacaatc 127408
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>gb|AC122753.11| Mus musculus chromosome 5, clone RP24-492O4, complete sequence
          Length = 183819

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 585   aacaatatctggctttaaat 604
             ||||||||||||||||||||
Sbjct: 42057 aacaatatctggctttaaat 42038
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>emb|BX936302.13| Zebrafish DNA sequence from clone CH211-191C10 in linkage group 3,
             complete sequence
          Length = 79049

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 11    tggctgagcaaactaaacaataaa 34
             |||||||||||| |||||||||||
Sbjct: 15817 tggctgagcaaaataaacaataaa 15794



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 11    tggctgagcaaactaaacaataaa 34
             |||||||||||| |||||||||||
Sbjct: 12553 tggctgagcaaaataaacaataaa 12530
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>emb|AJ566504.1|TCA566504 Theobroma cacao microsatellite, clone mTcCIR176
          Length = 236

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 587 caatatctggctttaaatct 606
           ||||||||||||||||||||
Sbjct: 67  caatatctggctttaaatct 48
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>gb|AC004594.2| Homo sapiens PAC clone RP5-1101C3 from 7, complete sequence
          Length = 151874

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   tgaaatgtattacaacaatc 168
             ||||||||||||||||||||
Sbjct: 79791 tgaaatgtattacaacaatc 79772
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>emb|CR936240.10| Zebrafish DNA sequence from clone DKEY-233K19 in linkage group 16,
             complete sequence
          Length = 169758

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 124   catgctgcaggtagcattttgtgt 147
             |||||||||||||| |||||||||
Sbjct: 56917 catgctgcaggtagaattttgtgt 56940
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>emb|AL606827.10| Human DNA sequence from clone RP11-90C4 on chromosome 1 Contains part of
              a novel gene and two novel genes, complete sequence
          Length = 139790

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 421    caagacttggattagaactt 440
              ||||||||||||||||||||
Sbjct: 114860 caagacttggattagaactt 114841
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>emb|AL390785.15| Human DNA sequence from clone RP11-325N9 on chromosome 10, complete
             sequence
          Length = 203169

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 284   aagggcagaaggataaagcaaatg 307
             ||||||||||| ||||||||||||
Sbjct: 33186 aagggcagaagaataaagcaaatg 33209
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>gb|AC079271.4| Homo sapiens chromosome 10 clone RP11-455I1, complete sequence
          Length = 200476

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 284    aagggcagaaggataaagcaaatg 307
              ||||||||||| ||||||||||||
Sbjct: 187027 aagggcagaagaataaagcaaatg 187050
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>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces
              hansenii
          Length = 1349926

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     ctgagcaaactaaacaataa 33
              ||||||||||||||||||||
Sbjct: 964745 ctgagcaaactaaacaataa 964764
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>emb|BX511222.10| Zebrafish DNA sequence from clone DKEY-250J7 in linkage group 18,
             complete sequence
          Length = 151023

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 135   tagcattttgtgtatgaaatgtat 158
             |||| |||||||||||||||||||
Sbjct: 23443 tagctttttgtgtatgaaatgtat 23466
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>emb|BX511148.7| Zebrafish DNA sequence from clone DKEY-174N20 in linkage group 5,
             complete sequence
          Length = 162495

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    ctaaacaataaagtgttaca 42
             ||||||||||||||||||||
Sbjct: 78226 ctaaacaataaagtgttaca 78245
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>gb|AC063962.11| Homo sapiens chromosome 10 clone RP11-222G7, complete sequence
          Length = 171818

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 460   acagaaaagttttgcatatcaaaa 483
             |||||||||||| |||||||||||
Sbjct: 13644 acagaaaagtttagcatatcaaaa 13667
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>gb|AC018511.5| Homo sapiens chromosome 10 clone RP11-77G23, complete sequence
          Length = 159519

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 460   acagaaaagttttgcatatcaaaa 483
             |||||||||||| |||||||||||
Sbjct: 58347 acagaaaagtttagcatatcaaaa 58324
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>gb|S47716.1| Seoul virus 80-39 glycoprotein precusor gene, complete cds
          Length = 3651

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 167  tccacacaagcaatcaagag 186
            ||||||||||||||||||||
Sbjct: 1587 tccacacaagcaatcaagag 1606
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 167      tccacacaagcaatcaagag 186
                ||||||||||||||||||||
Sbjct: 26562088 tccacacaagcaatcaagag 26562107
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>emb|BX321919.10| Zebrafish DNA sequence from clone CH211-236B8, complete sequence
          Length = 163495

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 135    tagcattttgtgtatgaaatgtat 158
              |||| |||||||||||||||||||
Sbjct: 155036 tagctttttgtgtatgaaatgtat 155059
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>dbj|AP003848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1715_A07
          Length = 130907

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 481   aaattggccagacaggttcagcct 504
             |||||||||||| |||||||||||
Sbjct: 30665 aaattggccagaaaggttcagcct 30642
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>dbj|AP003712.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0460H04
          Length = 166490

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   tccacacaagcaatcaagag 186
             ||||||||||||||||||||
Sbjct: 95741 tccacacaagcaatcaagag 95760
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>dbj|AK067261.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096G06, full
            insert sequence
          Length = 2720

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 167  tccacacaagcaatcaagag 186
            ||||||||||||||||||||
Sbjct: 2577 tccacacaagcaatcaagag 2558
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>emb|CR352221.10| Zebrafish DNA sequence from clone DKEY-87M9 in linkage group 3, complete
              sequence
          Length = 183589

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 11     tggctgagcaaactaaacaataaa 34
              |||||||||||| |||||||||||
Sbjct: 161600 tggctgagcaaaataaacaataaa 161577
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>emb|AL732330.14| Mouse DNA sequence from clone RP23-130L11 on chromosome 2, complete
             sequence
          Length = 241418

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   gcattttgtgtatgaaatgt 156
             ||||||||||||||||||||
Sbjct: 42427 gcattttgtgtatgaaatgt 42446
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>gb|L28755.1|PROAARA Providencia stuartii 2'-N-acetyltransferase (aarA) gene, complete cds
          Length = 3016

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 399  gcaaaatatttgctgctcaa 418
            ||||||||||||||||||||
Sbjct: 1303 gcaaaatatttgctgctcaa 1284
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>emb|AL772183.5| Mouse DNA sequence from clone RP23-36D21 on chromosome 4, complete
              sequence
          Length = 157805

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 412    tgctcaacacaagacttgga 431
              ||||||||||||||||||||
Sbjct: 131561 tgctcaacacaagacttgga 131580


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,395,750
Number of Sequences: 3902068
Number of extensions: 6395750
Number of successful extensions: 120230
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 119853
Number of HSP's gapped (non-prelim): 376
length of query: 621
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 598
effective length of database: 17,143,297,704
effective search space: 10251692026992
effective search space used: 10251692026992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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