>Y110_METJA (Q57574) Hypothetical protein MJ0110|
          Length = 93

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = -1

Query: 531 IKTKSVEYMPFSLSLTLTXSAVVWFLYGLLIKDKYVALPNILGFTF 394
           +K K +  +  +  +T T    +W +YG+L  D  + + NIL   F
Sbjct: 32  LKEKDMSNISLAFVITFTTGLTLWLIYGILRNDYPIIVFNILSLMF 77

>YAJR_ECOLI (P77726) Inner membrane transport protein yajR|
          Length = 454

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = +2

Query: 308 HASFPSLASLATTGVAFM*NM*RTIWIIPN 397
           HA F  +A LATTG+A       TIW++PN
Sbjct: 165 HALFWMIAILATTGIAL------TIWVVPN 188

>MUC5A_HUMAN (P98088) Mucin-5AC (Mucin 5 subtype AC, tracheobronchial)|
           (Tracheobronchial mucin) (TBM) (Major airway
           glycoprotein) (Fragment)
          Length = 1233

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
 Frame = +2

Query: 137 TTSTERAKSTAITRCPGAAASAAHLLGTSATGRTSAHE----LLSALPTLITTTWSSAGT 304
           TTST  A +T+ T  PG   S      T++   TS         S +PT  TT  S   T
Sbjct: 129 TTSTTSAPTTSTTSGPGTTPSPVPTTSTTSAPTTSTTSGPGTTPSPVPTTSTTPVSKTST 188

Query: 305 FHAS 316
            H S
Sbjct: 189 SHLS 192

>PRY3_YEAST (P47033) Protein PRY3 (Pathogen related in Sc 3)|
          Length = 881

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 22/73 (30%), Positives = 35/73 (47%)
 Frame = +2

Query: 137 TTSTERAKSTAITRCPGAAASAAHLLGTSATGRTSAHELLSALPTLITTTWSSAGTFHAS 316
           TT+ E + +T IT    A   +   L T+A   T A   ++  PTL  T  S++ T +A 
Sbjct: 542 TTTLENSSTTTIT----AITKSTTTLATTANNSTRAATAVTIDPTLDPTDNSASPTDNAK 597

Query: 317 FPSLASLATTGVA 355
             S    ++TG +
Sbjct: 598 HTSTYGSSSTGAS 610

>SYE_SULSO (P95968) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA|
           ligase) (GluRS)
          Length = 575

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = -3

Query: 481 HXQRRRLVPLRPAHQGQI--RRAPKHPWLHIRDDPDGPLHVLHERDA 347
           H ++R+++P  P  +GQ+  R AP         +PDGPLH+ + R A
Sbjct: 85  HEEKRKVLPPLPNVKGQVVTRFAP---------NPDGPLHLGNARSA 122


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,521,614
Number of Sequences: 219361
Number of extensions: 1206132
Number of successful extensions: 4143
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4133
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)