Clone Name | rbasd21j01 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK121220.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090H02, full insert sequence Length = 694 Score = 335 bits (169), Expect = 1e-88 Identities = 263/295 (89%) Strand = Plus / Minus Query: 250 tcatttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgat 309 |||||| |||||||| || |||||||||||||| || || || |||||||||||||| || Sbjct: 437 tcatttcgggttcctgagcacaatgatgaccgaatccccacgtaggaacatcttgctaat 378 Query: 310 gaacctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctc 369 |||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| Sbjct: 377 gaacctgtccttgttcactggaagagccttcttcttgcctttaccagtctttggtacctc 318 Query: 370 agtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcat 429 |||||||||||||||||| ||||| ||||||||||||||||| || |||||||| |||| Sbjct: 317 agtccacatctccctaacattctcaagaaccatgttgcaatggcgatcaaatgccctcac 258 Query: 430 gcgaccaagtagcttcttgttgttccggcagttgataagtacctgggtattgttcttgac 489 |||||||| | |||||||||||||||||| |||||||| |||||||| |||||||| || Sbjct: 257 acgaccaagcaacttcttgttgttccggcaattgataagcacctgggtgttgttcttcac 198 Query: 490 gctcatcatgagcagggacaggggcccggtgctgaactcctnctcctncttcttc 544 ||||||||| |||| |||||| ||||| || ||||| |||| ||||| ||||||| Sbjct: 197 gctcatcatcagcacggacagcggccccgtactgaattcctcctcctccttcttc 143
>gb|AY103713.1| Zea mays PCO076540 mRNA sequence Length = 785 Score = 192 bits (97), Expect = 1e-45 Identities = 208/245 (84%) Strand = Plus / Minus Query: 254 ttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaac 313 ||||||||||| || || ||||||||||||||||| | ||||||||||||||||||||| Sbjct: 457 ttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaat 398 Query: 314 ctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtc 373 || ||||||||||| || || |||||||| ||||| ||||||||||| || ||||| ||| Sbjct: 397 ctatccttgttcacaggcagagccttctttttgcccttgccagtcttggggacctctgtc 338 Query: 374 cacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcatgcga 433 |||||||||| ||||||||||| |||||||| || || || ||||| || | | || Sbjct: 337 cacatctcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaacccgg 278 Query: 434 ccaagtagcttcttgttgttccggcagttgataagtacctgggtattgttcttgacgctc 493 ||||| |||||||||||||| ||||| ||||| || |||||||| |||||||| || ||| Sbjct: 277 ccaagcagcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaacactc 218 Query: 494 atcat 498 ||||| Sbjct: 217 atcat 213
>dbj|AK105062.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-B09, full insert sequence Length = 360 Score = 190 bits (96), Expect = 4e-45 Identities = 132/144 (91%) Strand = Plus / Minus Query: 250 tcatttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgat 309 |||||| |||||||| || |||||||||||||| || || || |||||||||||||| || Sbjct: 145 tcatttcgggttcctgagcacaatgatgaccgaatccccacgtaggaacatcttgctaat 86 Query: 310 gaacctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctc 369 |||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| Sbjct: 85 gaacctgtccttgttcactggaagagccttcttcttgcctttaccagtctttggtacctc 26 Query: 370 agtccacatctccctaacgttctc 393 |||||||||||||||||| ||||| Sbjct: 25 agtccacatctccctaacattctc 2
>ref|NM_189410.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 153 Score = 186 bits (94), Expect = 6e-44 Identities = 124/134 (92%) Strand = Plus / Minus Query: 269 acaatgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcact 328 ||||||||||||||||| || || |||||||||||||||||||||||||||||||||||| Sbjct: 134 acaatgatgaccgagtccccacgtaggaacatcttgctgatgaacctgtccttgttcact 75 Query: 329 ggaagggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacg 388 ||||| ||||||||||||||||| ||||||||||| ||||| |||||||||||||| || Sbjct: 74 ggaagagccttcttcttgcctttaccagtctttggtacctcggtccacatctccctgaca 15 Query: 389 ttctcgagaaccat 402 ||||| |||||||| Sbjct: 14 ttctcaagaaccat 1
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 151 bits (76), Expect = 3e-33 Identities = 94/100 (94%) Strand = Plus / Plus Query: 269 acaatgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcact 328 ||||||||||||||||| || || |||||||||||||||||||||||||||||||||||| Sbjct: 42631233 acaatgatgaccgagtccccacgtaggaacatcttgctgatgaacctgtccttgttcact 42631292 Query: 329 ggaagggccttcttcttgcctttgccagtctttggaacct 368 ||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 42631293 ggaagagccttcttcttgcctttaccagtctttggtacct 42631332 Score = 97.6 bits (49), Expect = 4e-17 Identities = 94/109 (86%) Strand = Plus / Plus Query: 365 acctcagtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgct 424 ||||| |||||||||||||| || ||||| ||||||||||||||||| | |||||||| Sbjct: 42631421 acctcggtccacatctccctgacattctcaagaaccatgttgcaatggctatcaaatgcc 42631480 Query: 425 ctcatgcgaccaagtagcttcttgttgttccggcagttgataagtacct 473 |||| ||||| |||| ||||||||||||| |||| |||||||| |||| Sbjct: 42631481 ctcacacgacctagtaacttcttgttgttctggcaattgataagcacct 42631529
>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0458E05 Length = 193577 Score = 151 bits (76), Expect = 3e-33 Identities = 94/100 (94%) Strand = Plus / Plus Query: 269 acaatgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcact 328 ||||||||||||||||| || || |||||||||||||||||||||||||||||||||||| Sbjct: 152116 acaatgatgaccgagtccccacgtaggaacatcttgctgatgaacctgtccttgttcact 152175 Query: 329 ggaagggccttcttcttgcctttgccagtctttggaacct 368 ||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 152176 ggaagagccttcttcttgcctttaccagtctttggtacct 152215 Score = 97.6 bits (49), Expect = 4e-17 Identities = 94/109 (86%) Strand = Plus / Plus Query: 365 acctcagtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgct 424 ||||| |||||||||||||| || ||||| ||||||||||||||||| | |||||||| Sbjct: 152304 acctcggtccacatctccctgacattctcaagaaccatgttgcaatggctatcaaatgcc 152363 Query: 425 ctcatgcgaccaagtagcttcttgttgttccggcagttgataagtacct 473 |||| ||||| |||| ||||||||||||| |||| |||||||| |||| Sbjct: 152364 ctcacacgacctagtaacttcttgttgttctggcaattgataagcacct 152412
>gb|AC104271.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1308_D01, complete sequence Length = 117724 Score = 149 bits (75), Expect = 1e-32 Identities = 108/119 (90%) Strand = Plus / Plus Query: 250 tcatttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgat 309 |||||| |||||||| || |||||||||||||| || || || |||||||||||||| || Sbjct: 45272 tcatttcgggttcctgagcacaatgatgaccgaatccccacgtaggaacatcttgctaat 45331 Query: 310 gaacctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacct 368 |||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 45332 gaacctgtccttgttcactggaagagccttcttcttgcctttaccagtctttggtacct 45390 Score = 129 bits (65), Expect = 1e-26 Identities = 98/109 (89%) Strand = Plus / Plus Query: 365 acctcagtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgct 424 ||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||||| Sbjct: 45473 acctcagtccacatctccctaacattctcaagaaccatgttgcaatggcgatcaaatgcc 45532 Query: 425 ctcatgcgaccaagtagcttcttgttgttccggcagttgataagtacct 473 |||| |||||||| | |||||||||||||||||| |||||||| |||| Sbjct: 45533 ctcacacgaccaagcaacttcttgttgttccggcaattgataagcacct 45581 Score = 73.8 bits (37), Expect = 6e-10 Identities = 65/75 (86%) Strand = Plus / Plus Query: 470 acctgggtattgttcttgacgctcatcatgagcagggacaggggcccggtgctgaactcc 529 |||||||| |||||||| ||||||||||| |||| |||||| ||||| || ||||| ||| Sbjct: 47190 acctgggtgttgttcttcacgctcatcatcagcacggacagcggccccgtactgaattcc 47249 Query: 530 tnctcctncttcttc 544 | ||||| ||||||| Sbjct: 47250 tcctcctccttcttc 47264
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 149 bits (75), Expect = 1e-32 Identities = 108/119 (90%) Strand = Plus / Plus Query: 250 tcatttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgat 309 |||||| |||||||| || |||||||||||||| || || || |||||||||||||| || Sbjct: 14316486 tcatttcgggttcctgagcacaatgatgaccgaatccccacgtaggaacatcttgctaat 14316545 Query: 310 gaacctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacct 368 |||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 14316546 gaacctgtccttgttcactggaagagccttcttcttgcctttaccagtctttggtacct 14316604 Score = 129 bits (65), Expect = 1e-26 Identities = 98/109 (89%) Strand = Plus / Plus Query: 365 acctcagtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgct 424 ||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||||| Sbjct: 14316687 acctcagtccacatctccctaacattctcaagaaccatgttgcaatggcgatcaaatgcc 14316746 Query: 425 ctcatgcgaccaagtagcttcttgttgttccggcagttgataagtacct 473 |||| |||||||| | |||||||||||||||||| |||||||| |||| Sbjct: 14316747 ctcacacgaccaagcaacttcttgttgttccggcaattgataagcacct 14316795 Score = 73.8 bits (37), Expect = 6e-10 Identities = 65/75 (86%) Strand = Plus / Plus Query: 470 acctgggtattgttcttgacgctcatcatgagcagggacaggggcccggtgctgaactcc 529 |||||||| |||||||| ||||||||||| |||| |||||| ||||| || ||||| ||| Sbjct: 14318404 acctgggtgttgttcttcacgctcatcatcagcacggacagcggccccgtactgaattcc 14318463 Query: 530 tnctcctncttcttc 544 | ||||| ||||||| Sbjct: 14318464 tcctcctccttcttc 14318478
>ref|NM_180146.3| Arabidopsis thaliana unknown protein AT2G47640 transcript variant AT2G47640.2 mRNA, complete cds Length = 586 Score = 145 bits (73), Expect = 2e-31 Identities = 205/249 (82%) Strand = Plus / Minus Query: 250 tcatttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgat 309 |||||| || ||||| || || || ||||||||||| || || || ||||||||||| || Sbjct: 418 tcattttggattcctgaggacgataatgaccgagtctccacgtagaaacatcttgcttat 359 Query: 310 gaacctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctc 369 ||||| || ||||||| ||||| || |||||||||||||| ||||| || |||||||| Sbjct: 358 gaaccgatctctgttcaccggaagtgctttcttcttgcctttcccagttttcggaacctc 299 Query: 370 agtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcat 429 |||||||||||| || || || || |||||||||||||| || | |||||| || |||| Sbjct: 298 agtccacatctctctgacattttcaagaaccatgttgcagtgtctgtcaaacgccctcac 239 Query: 430 gcgaccaagtagcttcttgttgttccggcagttgataagtacctgggtattgttcttgac 489 || ||||| || ||| ||||||||||||| ||||| | ||||| || || |||||||| Sbjct: 238 tcgcccaagaagtttcctgttgttccggcaattgattaaaacctgagtgttattcttgac 179 Query: 490 gctcatcat 498 ||||||||| Sbjct: 178 gctcatcat 170
>ref|NM_201981.2| Arabidopsis thaliana unknown protein AT2G47640 transcript variant AT2G47640.3 mRNA, complete cds Length = 594 Score = 145 bits (73), Expect = 2e-31 Identities = 205/249 (82%) Strand = Plus / Minus Query: 250 tcatttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgat 309 |||||| || ||||| || || || ||||||||||| || || || ||||||||||| || Sbjct: 426 tcattttggattcctgaggacgataatgaccgagtctccacgtagaaacatcttgcttat 367 Query: 310 gaacctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctc 369 ||||| || ||||||| ||||| || |||||||||||||| ||||| || |||||||| Sbjct: 366 gaaccgatctctgttcaccggaagtgctttcttcttgcctttcccagttttcggaacctc 307 Query: 370 agtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcat 429 |||||||||||| || || || || |||||||||||||| || | |||||| || |||| Sbjct: 306 agtccacatctctctgacattttcaagaaccatgttgcagtgtctgtcaaacgccctcac 247 Query: 430 gcgaccaagtagcttcttgttgttccggcagttgataagtacctgggtattgttcttgac 489 || ||||| || ||| ||||||||||||| ||||| | ||||| || || |||||||| Sbjct: 246 tcgcccaagaagtttcctgttgttccggcaattgattaaaacctgagtgttattcttgac 187 Query: 490 gctcatcat 498 ||||||||| Sbjct: 186 gctcatcat 178
>ref|NM_130332.2| Arabidopsis thaliana unknown protein AT2G47640 transcript variant AT2G47640.1 mRNA, complete cds Length = 624 Score = 145 bits (73), Expect = 2e-31 Identities = 205/249 (82%) Strand = Plus / Minus Query: 250 tcatttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgat 309 |||||| || ||||| || || || ||||||||||| || || || ||||||||||| || Sbjct: 456 tcattttggattcctgaggacgataatgaccgagtctccacgtagaaacatcttgcttat 397 Query: 310 gaacctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctc 369 ||||| || ||||||| ||||| || |||||||||||||| ||||| || |||||||| Sbjct: 396 gaaccgatctctgttcaccggaagtgctttcttcttgcctttcccagttttcggaacctc 337 Query: 370 agtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcat 429 |||||||||||| || || || || |||||||||||||| || | |||||| || |||| Sbjct: 336 agtccacatctctctgacattttcaagaaccatgttgcagtgtctgtcaaacgccctcac 277 Query: 430 gcgaccaagtagcttcttgttgttccggcagttgataagtacctgggtattgttcttgac 489 || ||||| || ||| ||||||||||||| ||||| | ||||| || || |||||||| Sbjct: 276 tcgcccaagaagtttcctgttgttccggcaattgattaaaacctgagtgttattcttgac 217 Query: 490 gctcatcat 498 ||||||||| Sbjct: 216 gctcatcat 208
>emb|BX821379.1|CNS0AA65 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL37ZF02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 586 Score = 145 bits (73), Expect = 2e-31 Identities = 205/249 (82%) Strand = Plus / Minus Query: 250 tcatttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgat 309 |||||| || ||||| || || || ||||||||||| || || || ||||||||||| || Sbjct: 426 tcattttggattcctgaggacgataatgaccgagtctccacgtagaaacatcttgcttat 367 Query: 310 gaacctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctc 369 ||||| || ||||||| ||||| || |||||||||||||| ||||| || |||||||| Sbjct: 366 gaaccgatctctgttcaccggaagtgctttcttcttgcctttcccagttttcggaacctc 307 Query: 370 agtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcat 429 |||||||||||| || || || || |||||||||||||| || | |||||| || |||| Sbjct: 306 agtccacatctctctgacattttcaagaaccatgttgcagtgtctgtcaaacgccctcac 247 Query: 430 gcgaccaagtagcttcttgttgttccggcagttgataagtacctgggtattgttcttgac 489 || ||||| || ||| ||||||||||||| ||||| | ||||| || || |||||||| Sbjct: 246 tcgcccaagaagtttcctgttgttccggcaattgattaaaacctgagtgttattcttgac 187 Query: 490 gctcatcat 498 ||||||||| Sbjct: 186 gctcatcat 178
>gb|BT004783.1| Arabidopsis thaliana At2g47640 gene, complete cds Length = 327 Score = 145 bits (73), Expect = 2e-31 Identities = 205/249 (82%) Strand = Plus / Minus Query: 250 tcatttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgat 309 |||||| || ||||| || || || ||||||||||| || || || ||||||||||| || Sbjct: 327 tcattttggattcctgaggacgataatgaccgagtctccacgtagaaacatcttgcttat 268 Query: 310 gaacctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctc 369 ||||| || ||||||| ||||| || |||||||||||||| ||||| || |||||||| Sbjct: 267 gaaccgatctctgttcaccggaagtgctttcttcttgcctttcccagttttcggaacctc 208 Query: 370 agtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcat 429 |||||||||||| || || || || |||||||||||||| || | |||||| || |||| Sbjct: 207 agtccacatctctctgacattttcaagaaccatgttgcagtgtctgtcaaacgccctcac 148 Query: 430 gcgaccaagtagcttcttgttgttccggcagttgataagtacctgggtattgttcttgac 489 || ||||| || ||| ||||||||||||| ||||| | ||||| || || |||||||| Sbjct: 147 tcgcccaagaagtttcctgttgttccggcaattgattaaaacctgagtgttattcttgac 88 Query: 490 gctcatcat 498 ||||||||| Sbjct: 87 gctcatcat 79
>gb|AY086601.1| Arabidopsis thaliana clone 26123 mRNA, complete sequence Length = 619 Score = 145 bits (73), Expect = 2e-31 Identities = 205/249 (82%) Strand = Plus / Minus Query: 250 tcatttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgat 309 |||||| || ||||| || || || ||||||||||| || || || ||||||||||| || Sbjct: 451 tcattttggattcctgaggacgataatgaccgagtctccacgtagaaacatcttgcttat 392 Query: 310 gaacctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctc 369 ||||| || ||||||| ||||| || |||||||||||||| ||||| || |||||||| Sbjct: 391 gaaccgatctctgttcaccggaagtgctttcttcttgcctttcccagttttcggaacctc 332 Query: 370 agtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcat 429 |||||||||||| || || || || |||||||||||||| || | |||||| || |||| Sbjct: 331 agtccacatctctctgacattttcaagaaccatgttgcagtgtctgtcaaacgccctcac 272 Query: 430 gcgaccaagtagcttcttgttgttccggcagttgataagtacctgggtattgttcttgac 489 || ||||| || ||| ||||||||||||| ||||| | ||||| || || |||||||| Sbjct: 271 tcgcccaagaagtttcctgttgttccggcaattgattaaaacctgagtgttattcttgac 212 Query: 490 gctcatcat 498 ||||||||| Sbjct: 211 gctcatcat 203
>gb|AY610377.1| Sus scrofa clone reli1115b_h17.y1.abd, mRNA sequence Length = 415 Score = 121 bits (61), Expect = 3e-24 Identities = 179/217 (82%), Gaps = 1/217 (0%) Strand = Plus / Minus Query: 274 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 333 |||||||||||| ||||| |||||||||||| |||| | | ||||||||| || || Sbjct: 373 gatgaccgagtccccgcgcaggaacatcttggagatgtagcggtccttgttgacgggctt 314 Query: 334 ggccttcttcttgc-ctttgccagtctttggaacctcagtccacatctccctaacgttct 392 || ||||||||||| | ||||| |||| || |||||||||||||||||| | ||||||| Sbjct: 313 ggacttcttcttgcaccttgccgctcttggggacctcagtccacatctccttcacgttct 254 Query: 393 cgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgt 452 | || ||||||||||| || | |||||| || ||| ||| || || ||||||||||||| Sbjct: 253 ccagcaccatgttgcagtgcctgtcaaaggccttcacgcggcccaggagcttcttgttgt 194 Query: 453 tccggcagttgataagtacctgggtattgttcttgac 489 | ||||||||||| || || ||||| ||||||||||| Sbjct: 193 tgcggcagttgatgagcacttgggtgttgttcttgac 157
>ref|XM_512755.1| PREDICTED: Pan troglodytes LOC456134 (LOC456134), mRNA Length = 393 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Minus Query: 274 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 333 |||||||||||| ||||| |||||||||||| |||| | | ||| ||||| ||||| Sbjct: 342 gatgaccgagtccccgcgcaggaacatcttggagatgtagcggtctttgttgactggctt 283 Query: 334 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 393 || |||||||||||| ||||| |||| || |||||||||||||||||| | |||||||| Sbjct: 282 ggacttcttcttgcccttgccgctcttgggtacctcagtccacatctccttcacgttctc 223 Query: 394 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 453 || ||||||||||| || | || || || ||| ||| || || || ||||| ||||| Sbjct: 222 cagcaccatgttgcagtgcctatcgaaggccttcacgcggcccaggagtttcttattgtt 163 Query: 454 ccggcagttgataagtacctgggtattgttcttgac 489 ||||||||||| || || ||||||||||||||||| Sbjct: 162 gcggcagttgatgagcacttgggtattgttcttgac 127
>gb|BC000486.2| Homo sapiens small nuclear ribonucleoprotein D2 polypeptide 16.5kDa, transcript variant 1, mRNA (cDNA clone MGC:8353 IMAGE:2819767), complete cds Length = 492 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Minus Query: 274 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 333 |||||| ||||| ||||| |||||||||||| |||| | | ||| ||||| ||||| Sbjct: 347 gatgactgagtccccgcgcaggaacatcttggagatgtagcggtctttgttgactggctt 288 Query: 334 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 393 || |||||||||||| |||||| |||| || |||||||||||||||||| | |||||||| Sbjct: 287 ggacttcttcttgcccttgccactcttgggtacctcagtccacatctccttcacgttctc 228 Query: 394 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 453 || ||||||||||| || | || || || ||| ||| || || || ||||| ||||| Sbjct: 227 cagcaccatgttgcagtgcctatcgaaggccttcacgcggcccaggagtttcttattgtt 168 Query: 454 ccggcagttgataagtacctgggtattgttcttgac 489 ||||||||||| || || ||||||||||||||||| Sbjct: 167 gcggcagttgatgagcacttgggtattgttcttgac 132
>gb|BC001930.2| Homo sapiens small nuclear ribonucleoprotein D2 polypeptide 16.5kDa, transcript variant 1, mRNA (cDNA clone MGC:3995 IMAGE:2819767), complete cds Length = 470 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Minus Query: 274 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 333 |||||| ||||| ||||| |||||||||||| |||| | | ||| ||||| ||||| Sbjct: 325 gatgactgagtccccgcgcaggaacatcttggagatgtagcggtctttgttgactggctt 266 Query: 334 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 393 || |||||||||||| |||||| |||| || |||||||||||||||||| | |||||||| Sbjct: 265 ggacttcttcttgcccttgccactcttgggtacctcagtccacatctccttcacgttctc 206 Query: 394 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 453 || ||||||||||| || | || || || ||| ||| || || || ||||| ||||| Sbjct: 205 cagcaccatgttgcagtgcctatcgaaggccttcacgcggcccaggagtttcttattgtt 146 Query: 454 ccggcagttgataagtacctgggtattgttcttgac 489 ||||||||||| || || ||||||||||||||||| Sbjct: 145 gcggcagttgatgagcacttgggtattgttcttgac 110
>ref|NM_177542.1| Homo sapiens small nuclear ribonucleoprotein D2 polypeptide 16.5kDa (SNRPD2), transcript variant 2, mRNA Length = 876 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Minus Query: 274 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 333 |||||| ||||| ||||| |||||||||||| |||| | | ||| ||||| ||||| Sbjct: 731 gatgactgagtccccgcgcaggaacatcttggagatgtagcggtctttgttgactggctt 672 Query: 334 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 393 || |||||||||||| |||||| |||| || |||||||||||||||||| | |||||||| Sbjct: 671 ggacttcttcttgcccttgccactcttgggtacctcagtccacatctccttcacgttctc 612 Query: 394 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 453 || ||||||||||| || | || || || ||| ||| || || || ||||| ||||| Sbjct: 611 cagcaccatgttgcagtgcctatcgaaggccttcacgcggcccaggagtttcttattgtt 552 Query: 454 ccggcagttgataagtacctgggtattgttcttgac 489 ||||||||||| || || ||||||||||||||||| Sbjct: 551 gcggcagttgatgagcacttgggtattgttcttgac 516
>ref|NM_004597.4| Homo sapiens small nuclear ribonucleoprotein D2 polypeptide 16.5kDa (SNRPD2), transcript variant 1, mRNA Length = 762 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Minus Query: 274 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 333 |||||| ||||| ||||| |||||||||||| |||| | | ||| ||||| ||||| Sbjct: 617 gatgactgagtccccgcgcaggaacatcttggagatgtagcggtctttgttgactggctt 558 Query: 334 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 393 || |||||||||||| |||||| |||| || |||||||||||||||||| | |||||||| Sbjct: 557 ggacttcttcttgcccttgccactcttgggtacctcagtccacatctccttcacgttctc 498 Query: 394 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 453 || ||||||||||| || | || || || ||| ||| || || || ||||| ||||| Sbjct: 497 cagcaccatgttgcagtgcctatcgaaggccttcacgcggcccaggagtttcttattgtt 438 Query: 454 ccggcagttgataagtacctgggtattgttcttgac 489 ||||||||||| || || ||||||||||||||||| Sbjct: 437 gcggcagttgatgagcacttgggtattgttcttgac 402
>gb|BC051368.1| Homo sapiens cDNA clone IMAGE:3956684, **** WARNING: chimeric clone **** Length = 1322 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Plus Query: 274 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 333 |||||| ||||| ||||| |||||||||||| |||| | | ||| ||||| ||||| Sbjct: 166 gatgactgagtccccgcgcaggaacatcttggagatgtagcggtctttgttgactggctt 225 Query: 334 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 393 || |||||||||||| |||||| |||| || |||||||||||||||||| | |||||||| Sbjct: 226 ggacttcttcttgcccttgccactcttgggtacctcagtccacatctccttcacgttctc 285 Query: 394 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 453 || ||||||||||| || | || || || ||| ||| || || || ||||| ||||| Sbjct: 286 cagcaccatgttgcagtgcctatcgaaggccttcacgcggcccaggagtttcttattgtt 345 Query: 454 ccggcagttgataagtacctgggtattgttcttgac 489 ||||||||||| || || ||||||||||||||||| Sbjct: 346 gcggcagttgatgagcacttgggtattgttcttgac 381
>gb|AY894074.1| Synthetic construct Homo sapiens clone FLH131151.01L small nuclear ribonucleoprotein D2 polypeptide (SNRPD2) mRNA, partial cds Length = 357 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Minus Query: 274 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 333 |||||| ||||| ||||| |||||||||||| |||| | | ||| ||||| ||||| Sbjct: 321 gatgactgagtccccgcgcaggaacatcttggagatgtagcggtctttgttgactggctt 262 Query: 334 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 393 || |||||||||||| |||||| |||| || |||||||||||||||||| | |||||||| Sbjct: 261 ggacttcttcttgcccttgccactcttgggtacctcagtccacatctccttcacgttctc 202 Query: 394 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 453 || ||||||||||| || | || || || ||| ||| || || || ||||| ||||| Sbjct: 201 cagcaccatgttgcagtgcctatcgaaggccttcacgcggcccaggagtttcttattgtt 142 Query: 454 ccggcagttgataagtacctgggtattgttcttgac 489 ||||||||||| || || ||||||||||||||||| Sbjct: 141 gcggcagttgatgagcacttgggtattgttcttgac 106
>gb|U15008.1|HSU15008 Human SnRNP core protein Sm D2 mRNA, complete cds Length = 479 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Minus Query: 274 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 333 |||||| ||||| ||||| |||||||||||| |||| | | ||| ||||| ||||| Sbjct: 351 gatgactgagtccccgcgcaggaacatcttggagatgtagcggtctttgttgactggctt 292 Query: 334 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 393 || |||||||||||| |||||| |||| || |||||||||||||||||| | |||||||| Sbjct: 291 ggacttcttcttgcccttgccactcttgggtacctcagtccacatctccttcacgttctc 232 Query: 394 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 453 || ||||||||||| || | || || || ||| ||| || || || ||||| ||||| Sbjct: 231 cagcaccatgttgcagtgcctatcgaaggccttcacgcggcccaggagtttcttattgtt 172 Query: 454 ccggcagttgataagtacctgggtattgttcttgac 489 ||||||||||| || || ||||||||||||||||| Sbjct: 171 gcggcagttgatgagcacttgggtattgttcttgac 136
>emb|CR714634.2|CNS0GED2 Tetraodon nigroviridis full-length cDNA Length = 610 Score = 107 bits (54), Expect = 4e-20 Identities = 212/265 (80%) Strand = Plus / Minus Query: 272 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 331 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 401 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 342 Query: 332 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 391 || |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 341 ttggacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 282 Query: 392 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 451 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 281 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 222 Query: 452 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 511 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 221 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 162 Query: 512 ggcccggtgctgaactcctnctcct 536 ||||| ||| ||||||||| ||||| Sbjct: 161 ggccccgtgttgaactcctcctcct 137
>emb|CR709252.2|CNS0GA7K Tetraodon nigroviridis full-length cDNA Length = 634 Score = 107 bits (54), Expect = 4e-20 Identities = 212/265 (80%) Strand = Plus / Minus Query: 272 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 331 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 420 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 361 Query: 332 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 391 || |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 360 ttggacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 301 Query: 392 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 451 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 300 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 241 Query: 452 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 511 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 240 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 181 Query: 512 ggcccggtgctgaactcctnctcct 536 ||||| ||| ||||||||| ||||| Sbjct: 180 ggccccgtgttgaactcctcctcct 156
>emb|CR707901.2|CNS0G961 Tetraodon nigroviridis full-length cDNA Length = 630 Score = 107 bits (54), Expect = 4e-20 Identities = 212/265 (80%) Strand = Plus / Minus Query: 272 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 331 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 416 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 357 Query: 332 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 391 || |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 356 ttggacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 297 Query: 392 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 451 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 296 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 237 Query: 452 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 511 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 236 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 177 Query: 512 ggcccggtgctgaactcctnctcct 536 ||||| ||| ||||||||| ||||| Sbjct: 176 ggccccgtgttgaactcctcctcct 152
>gb|AC151604.2| Emiliania huxleyi clone JGIACCU-13A1, complete sequence Length = 36530 Score = 107 bits (54), Expect = 4e-20 Identities = 212/265 (80%) Strand = Plus / Plus Query: 272 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 331 ||||||||||||||||| | ||||||||||| |||||| | ||| ||||| || || Sbjct: 3010 atgatgaccgagtcgcctctcaggaacatcttcgagatgaagcggtctttgttgacgggc 3069 Query: 332 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 391 ||||||||| ||| ||||| | || |||||||| |||||||||||| | |||||| Sbjct: 3070 ttggccttcttgacgcccttgccctttttgggaacctccgtccacatctccttgacgttc 3129 Query: 392 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 451 ||||| ||||||||||| || |||||||| || | | ||| || || |||||||||||| Sbjct: 3130 tcgagcaccatgttgcagtgccggtcaaaggccttgacgcggccgagcagcttcttgttg 3189 Query: 452 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 511 || ||||||||||| || ||||| || ||| |||||||||| | |||||| || || Sbjct: 3190 ttgcggcagttgatgagcacctgcgtgttggacttgacgctctgcgtgagcaccgagagc 3249 Query: 512 ggcccggtgctgaactcctnctcct 536 ||||||||| |||||||| ||||| Sbjct: 3250 ggcccggtgtggaactcctcctcct 3274
>emb|CR718739.2|CNS0GHIX Tetraodon nigroviridis full-length cDNA Length = 630 Score = 99.6 bits (50), Expect = 1e-17 Identities = 211/265 (79%) Strand = Plus / Minus Query: 272 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 331 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 416 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 357 Query: 332 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 391 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 356 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 297 Query: 392 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 451 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 296 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 237 Query: 452 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 511 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 236 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 177 Query: 512 ggcccggtgctgaactcctnctcct 536 ||||| ||| ||||||||| ||||| Sbjct: 176 ggccccgtgttgaactcctcctcct 152
>emb|CR711244.2|CNS0GBQW Tetraodon nigroviridis full-length cDNA Length = 604 Score = 99.6 bits (50), Expect = 1e-17 Identities = 211/265 (79%) Strand = Plus / Minus Query: 272 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 331 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 395 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 336 Query: 332 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 391 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 335 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 276 Query: 392 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 451 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 275 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 216 Query: 452 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 511 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 215 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 156 Query: 512 ggcccggtgctgaactcctnctcct 536 ||||| ||| ||||||||| ||||| Sbjct: 155 ggccccgtgttgaactcctcctcct 131
>emb|CR711029.2|CNS0GBKX Tetraodon nigroviridis full-length cDNA Length = 626 Score = 99.6 bits (50), Expect = 1e-17 Identities = 211/265 (79%) Strand = Plus / Minus Query: 272 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 331 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 412 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 353 Query: 332 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 391 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 352 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 293 Query: 392 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 451 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 292 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 233 Query: 452 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 511 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 232 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 173 Query: 512 ggcccggtgctgaactcctnctcct 536 ||||| ||| ||||||||| ||||| Sbjct: 172 ggccccgtgttgaactcctcctcct 148
>emb|CR708642.2|CNS0G9QM Tetraodon nigroviridis full-length cDNA Length = 630 Score = 99.6 bits (50), Expect = 1e-17 Identities = 176/218 (80%) Strand = Plus / Minus Query: 272 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 331 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||| ||| Sbjct: 416 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcattggc 357 Query: 332 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 391 || |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 356 ttggacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 297 Query: 392 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 451 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 296 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 237 Query: 452 ttccggcagttgataagtacctgggtattgttcttgac 489 || |||||||| || || ||||| || ||||||||||| Sbjct: 236 ttgcggcagttaatcaggacctgcgtgttgttcttgac 199
>emb|CR684049.2|CNS0FQRH Tetraodon nigroviridis full-length cDNA Length = 610 Score = 99.6 bits (50), Expect = 1e-17 Identities = 211/265 (79%) Strand = Plus / Minus Query: 272 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 331 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 404 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 345 Query: 332 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 391 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 344 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 285 Query: 392 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 451 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 284 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 225 Query: 452 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 511 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 224 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 165 Query: 512 ggcccggtgctgaactcctnctcct 536 ||||| ||| ||||||||| ||||| Sbjct: 164 ggccccgtgttgaactcctcctcct 140
>emb|CR666668.2|CNS0FDDE Tetraodon nigroviridis full-length cDNA Length = 598 Score = 99.6 bits (50), Expect = 1e-17 Identities = 211/265 (79%) Strand = Plus / Minus Query: 272 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 331 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 392 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 333 Query: 332 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 391 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 332 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 273 Query: 392 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 451 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 272 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 213 Query: 452 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 511 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 212 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 153 Query: 512 ggcccggtgctgaactcctnctcct 536 ||||| ||| ||||||||| ||||| Sbjct: 152 ggccccgtgttgaactcctcctcct 128
>emb|CR662559.2|CNS0FA79 Tetraodon nigroviridis full-length cDNA Length = 622 Score = 99.6 bits (50), Expect = 1e-17 Identities = 211/265 (79%) Strand = Plus / Minus Query: 272 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 331 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 416 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 357 Query: 332 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 391 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 356 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 297 Query: 392 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 451 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 296 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 237 Query: 452 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 511 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 236 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 177 Query: 512 ggcccggtgctgaactcctnctcct 536 ||||| ||| ||||||||| ||||| Sbjct: 176 ggccccgtgttgaactcctcctcct 152
>emb|CR662545.2|CNS0FA6V Tetraodon nigroviridis full-length cDNA Length = 616 Score = 99.6 bits (50), Expect = 1e-17 Identities = 211/265 (79%) Strand = Plus / Minus Query: 272 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 331 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 411 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 352 Query: 332 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 391 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 351 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 292 Query: 392 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 451 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 291 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 232 Query: 452 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 511 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 231 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 172 Query: 512 ggcccggtgctgaactcctnctcct 536 ||||| ||| ||||||||| ||||| Sbjct: 171 ggccccgtgttgaactcctcctcct 147
>emb|CR655397.2|CNS0F4OB Tetraodon nigroviridis full-length cDNA Length = 618 Score = 99.6 bits (50), Expect = 1e-17 Identities = 211/265 (79%) Strand = Plus / Minus Query: 272 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 331 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 412 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 353 Query: 332 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 391 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 352 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 293 Query: 392 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 451 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 292 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 233 Query: 452 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 511 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 232 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 173 Query: 512 ggcccggtgctgaactcctnctcct 536 ||||| ||| ||||||||| ||||| Sbjct: 172 ggccccgtgttgaactcctcctcct 148
>emb|CR650196.2|CNS0F0NU Tetraodon nigroviridis full-length cDNA Length = 593 Score = 99.6 bits (50), Expect = 1e-17 Identities = 211/265 (79%) Strand = Plus / Minus Query: 272 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 331 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 387 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 328 Query: 332 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 391 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 327 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 268 Query: 392 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 451 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 267 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 208 Query: 452 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 511 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 207 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 148 Query: 512 ggcccggtgctgaactcctnctcct 536 ||||| ||| ||||||||| ||||| Sbjct: 147 ggccccgtgttgaactcctcctcct 123
>emb|CR646312.2|CNS0EXNY Tetraodon nigroviridis full-length cDNA Length = 432 Score = 99.6 bits (50), Expect = 1e-17 Identities = 211/265 (79%) Strand = Plus / Minus Query: 272 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 331 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 407 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 348 Query: 332 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 391 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 347 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 288 Query: 392 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 451 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 287 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 228 Query: 452 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 511 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 227 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 168 Query: 512 ggcccggtgctgaactcctnctcct 536 ||||| ||| ||||||||| ||||| Sbjct: 167 ggccccgtgttgaactcctcctcct 143
>emb|CR636529.2|CNS0EQ47 Tetraodon nigroviridis full-length cDNA Length = 431 Score = 99.6 bits (50), Expect = 1e-17 Identities = 211/265 (79%) Strand = Plus / Minus Query: 272 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 331 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 406 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 347 Query: 332 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 391 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 346 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 287 Query: 392 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 451 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 286 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 227 Query: 452 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 511 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 226 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 167 Query: 512 ggcccggtgctgaactcctnctcct 536 ||||| ||| ||||||||| ||||| Sbjct: 166 ggccccgtgttgaactcctcctcct 142
>emb|CR635163.2|CNS0EP29 Tetraodon nigroviridis full-length cDNA Length = 420 Score = 99.6 bits (50), Expect = 1e-17 Identities = 211/265 (79%) Strand = Plus / Minus Query: 272 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 331 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 395 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 336 Query: 332 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 391 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 335 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 276 Query: 392 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 451 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 275 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 216 Query: 452 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 511 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 215 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 156 Query: 512 ggcccggtgctgaactcctnctcct 536 ||||| ||| ||||||||| ||||| Sbjct: 155 ggccccgtgttgaactcctcctcct 131
>emb|CR634479.2|CNS0EOJ9 Tetraodon nigroviridis full-length cDNA Length = 612 Score = 99.6 bits (50), Expect = 1e-17 Identities = 211/265 (79%) Strand = Plus / Minus Query: 272 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 331 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 406 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 347 Query: 332 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 391 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 346 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 287 Query: 392 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 451 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 286 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 227 Query: 452 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 511 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 226 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 167 Query: 512 ggcccggtgctgaactcctnctcct 536 ||||| ||| ||||||||| ||||| Sbjct: 166 ggccccgtgttgaactcctcctcct 142
>gb|BC102877.1| Bos taurus similar to small nuclear ribonucleoprotein D2, mRNA (cDNA clone MGC:128077 IMAGE:7949710), complete cds Length = 596 Score = 97.6 bits (49), Expect = 4e-17 Identities = 169/209 (80%) Strand = Plus / Minus Query: 257 gggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaacctg 316 |||||||| || || | |||||| ||||| ||||| |||||||||||| |||| | | | Sbjct: 424 gggttcctcaggaccacgatgacagagtccccgcgcaggaacatcttggagatgtagcgg 365 Query: 317 tccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtccac 376 |||||||| || || || |||||||||||| ||||| |||| || ||||| |||||| Sbjct: 364 tccttgttgacgggcttggacttcttcttgcccttgccgctcttggggacctccgtccac 305 Query: 377 atctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcatgcgacca 436 || ||| | |||||||| || ||||||||||| || | |||||| || ||| ||| || Sbjct: 304 atttccttcacgttctccagcaccatgttgcagtgcctgtcaaaggccttcacgcggccc 245 Query: 437 agtagcttcttgttgttccggcagttgat 465 || |||||||||||||| ||||||||||| Sbjct: 244 aggagcttcttgttgttacggcagttgat 216
>ref|NM_001034476.1| Bos taurus similar to small nuclear ribonucleoprotein D2 (MGC128077), mRNA Length = 596 Score = 97.6 bits (49), Expect = 4e-17 Identities = 169/209 (80%) Strand = Plus / Minus Query: 257 gggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaacctg 316 |||||||| || || | |||||| ||||| ||||| |||||||||||| |||| | | | Sbjct: 424 gggttcctcaggaccacgatgacagagtccccgcgcaggaacatcttggagatgtagcgg 365 Query: 317 tccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtccac 376 |||||||| || || || |||||||||||| ||||| |||| || ||||| |||||| Sbjct: 364 tccttgttgacgggcttggacttcttcttgcccttgccgctcttggggacctccgtccac 305 Query: 377 atctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcatgcgacca 436 || ||| | |||||||| || ||||||||||| || | |||||| || ||| ||| || Sbjct: 304 atttccttcacgttctccagcaccatgttgcagtgcctgtcaaaggccttcacgcggccc 245 Query: 437 agtagcttcttgttgttccggcagttgat 465 || |||||||||||||| ||||||||||| Sbjct: 244 aggagcttcttgttgttacggcagttgat 216
>gb|AC007191.1|AC007191 Homo sapiens chromosome 19, cosmid R34072, complete sequence Length = 43390 Score = 93.7 bits (47), Expect = 7e-16 Identities = 113/135 (83%) Strand = Plus / Plus Query: 274 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 333 |||||| ||||| ||||| |||||||||||| |||| | | ||| ||||| ||||| Sbjct: 7518 gatgactgagtccccgcgcaggaacatcttggagatgtagcggtctttgttgactggctt 7577 Query: 334 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 393 || |||||||||||| |||||| |||| || |||||||||||||||||| | |||||||| Sbjct: 7578 ggacttcttcttgcccttgccactcttgggtacctcagtccacatctccttcacgttctc 7637 Query: 394 gagaaccatgttgca 408 || ||||||||||| Sbjct: 7638 cagcaccatgttgca 7652 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 443 ttcttgttgttccggcagttgataagtacctgggtattgttcttgac 489 ||||| ||||| ||||||||||| || || ||||||||||||||||| Sbjct: 8346 ttcttattgttgcggcagttgatgagcacttgggtattgttcttgac 8392
>emb|CR719572.2|CNS0GI62 Tetraodon nigroviridis full-length cDNA Length = 611 Score = 91.7 bits (46), Expect = 3e-15 Identities = 210/265 (79%) Strand = Plus / Minus Query: 272 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 331 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 402 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 343 Query: 332 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 391 | |||||||||||| || ||| ||||||| || || |||||||||||| | ||||| Sbjct: 342 ttagacttcttcttgcccttcccactctttgggacttctgtccacatctccttcacgttt 283 Query: 392 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 451 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 282 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 223 Query: 452 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 511 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 222 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 163 Query: 512 ggcccggtgctgaactcctnctcct 536 ||||| ||| ||||||||| ||||| Sbjct: 162 ggccccgtgttgaactcctcctcct 138
>emb|CR698887.2|CNS0G27N Tetraodon nigroviridis full-length cDNA Length = 535 Score = 91.7 bits (46), Expect = 3e-15 Identities = 210/265 (79%) Strand = Plus / Minus Query: 272 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 331 |||||||| |||||||| || |||||||| ||| |||| | | ||||||||||||| Sbjct: 321 atgatgacggagtcgccccgcaggaacattttggagatgtagcgacccttgttcactggc 262 Query: 332 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 391 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 261 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 202 Query: 392 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 451 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 201 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 142 Query: 452 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 511 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 141 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 82 Query: 512 ggcccggtgctgaactcctnctcct 536 ||||| ||| ||||||||| ||||| Sbjct: 81 ggccccgtgttgaactcctcctcct 57
>emb|CR665557.2|CNS0FCIJ Tetraodon nigroviridis full-length cDNA Length = 612 Score = 91.7 bits (46), Expect = 3e-15 Identities = 210/265 (79%) Strand = Plus / Minus Query: 272 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 331 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 407 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 348 Query: 332 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 391 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 347 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 288 Query: 392 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 451 || || ||||||| |||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 287 tccaggaccatgtggcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 228 Query: 452 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 511 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 227 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 168 Query: 512 ggcccggtgctgaactcctnctcct 536 ||||| ||| ||||||||| ||||| Sbjct: 167 ggccccgtgttgaactcctcctcct 143
>emb|CR660721.2|CNS0F8S7 Tetraodon nigroviridis full-length cDNA Length = 612 Score = 91.7 bits (46), Expect = 3e-15 Identities = 210/265 (79%) Strand = Plus / Minus Query: 272 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 331 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 406 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 347 Query: 332 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 391 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 346 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 287 Query: 392 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 451 || || |||||||||||||| | || ||| ||| | | | || || |||||||||||| Sbjct: 286 tccaggaccatgttgcaatgcctgtaaaaagctttgactcttccgagaagcttcttgttg 227 Query: 452 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 511 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 226 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 167 Query: 512 ggcccggtgctgaactcctnctcct 536 ||||| ||| ||||||||| ||||| Sbjct: 166 ggccccgtgttgaactcctcctcct 142
>ref|NM_116149.2| Arabidopsis thaliana unknown protein AT3G62840 mRNA, complete cds Length = 1063 Score = 89.7 bits (45), Expect = 1e-14 Identities = 195/245 (79%) Strand = Plus / Minus Query: 254 ttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaac 313 ||||||||||| || || || ||||| ||||| || || |||||||||||||||||||| Sbjct: 443 ttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgatgaat 384 Query: 314 ctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtc 373 | || |||| || ||||| || |||||||| ||||| || || || |||||||||||| Sbjct: 383 cgatctctgttaacaggaagagctttcttctttccttttccggttttcggaacctcagtc 324 Query: 374 cacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcatgcga 433 ||||| || || || || || |||||||||||||| || | |||||| || || | || Sbjct: 323 cacatttctctgacattttcaagaaccatgttgcagtgcctgtcaaaagccctaactcgg 264 Query: 434 ccaagtagcttcttgttgttccggcagttgataagtacctgggtattgttcttgacgctc 493 ||||| || ||| ||||||| ||||| ||||| | ||||| || || ||||| || ||| Sbjct: 263 ccaaggagtttcctgttgttacggcaattgatcaacacctgagtgttattcttaacactc 204 Query: 494 atcat 498 ||||| Sbjct: 203 atcat 199
>emb|CR715732.2|CNS0GF7K Tetraodon nigroviridis full-length cDNA Length = 394 Score = 89.7 bits (45), Expect = 1e-14 Identities = 141/173 (81%) Strand = Plus / Minus Query: 317 tccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtccac 376 |||||||||||||| | |||||||||||| || ||| |||||||||| || |||||| Sbjct: 367 tccttgttcactggcttagacttcttcttgcccttcccactctttggaacttctgtccac 308 Query: 377 atctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcatgcgacca 436 |||||| | ||||| || || |||||||||||||| | |||||| ||| | | | || Sbjct: 307 atctccttcacgttttccaggaccatgttgcaatgcctgtcaaaagctttgactcttccg 248 Query: 437 agtagcttcttgttgttccggcagttgataagtacctgggtattgttcttgac 489 || |||||||||||||| |||||||| || || ||||| || ||||||||||| Sbjct: 247 agaagcttcttgttgttgcggcagttaatcaggacctgcgtgttgttcttgac 195 Score = 89.7 bits (45), Expect = 1e-14 Identities = 161/200 (80%) Strand = Plus / Minus Query: 337 cttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgag 396 |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| || || Sbjct: 347 cttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttttccag 288 Query: 397 aaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgttccg 456 |||||||||||||| | |||||| ||| | | | || || |||||||||||||| || Sbjct: 287 gaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttgttgcg 228 Query: 457 gcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacaggggccc 516 |||||| || || ||||| || ||||||||||| | |||||| ||||||||||| Sbjct: 227 gcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacaggggccc 168 Query: 517 ggtgctgaactcctnctcct 536 ||| ||||||||| ||||| Sbjct: 167 cgtgttgaactcctcctcct 148
>emb|CR706650.2|CNS0G87A Tetraodon nigroviridis full-length cDNA Length = 394 Score = 89.7 bits (45), Expect = 1e-14 Identities = 141/173 (81%) Strand = Plus / Minus Query: 317 tccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtccac 376 |||||||||||||| | |||||||||||| || ||| |||||||||| || |||||| Sbjct: 367 tccttgttcactggcttagacttcttcttgcccttcccactctttggaacttctgtccac 308 Query: 377 atctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcatgcgacca 436 |||||| | ||||| || || |||||||||||||| | |||||| ||| | | | || Sbjct: 307 atctccttcacgttttccaggaccatgttgcaatgcctgtcaaaagctttgactcttccg 248 Query: 437 agtagcttcttgttgttccggcagttgataagtacctgggtattgttcttgac 489 || |||||||||||||| |||||||| || || ||||| || ||||||||||| Sbjct: 247 agaagcttcttgttgttgcggcagttaatcaggacctgcgtgttgttcttgac 195 Score = 89.7 bits (45), Expect = 1e-14 Identities = 161/200 (80%) Strand = Plus / Minus Query: 337 cttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgag 396 |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| || || Sbjct: 347 cttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttttccag 288 Query: 397 aaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgttccg 456 |||||||||||||| | |||||| ||| | | | || || |||||||||||||| || Sbjct: 287 gaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttgttgcg 228 Query: 457 gcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacaggggccc 516 |||||| || || ||||| || ||||||||||| | |||||| ||||||||||| Sbjct: 227 gcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacaggggccc 168 Query: 517 ggtgctgaactcctnctcct 536 ||| ||||||||| ||||| Sbjct: 167 cgtgttgaactcctcctcct 148
>emb|CR636749.1|CNS0EQAB Tetraodon nigroviridis full-length cDNA Length = 381 Score = 89.7 bits (45), Expect = 1e-14 Identities = 161/200 (80%) Strand = Plus / Minus Query: 337 cttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgag 396 |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| || || Sbjct: 362 cttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttttccag 303 Query: 397 aaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgttccg 456 |||||||||||||| | |||||| ||| | | | || || |||||||||||||| || Sbjct: 302 gaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttgttgcg 243 Query: 457 gcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacaggggccc 516 |||||| || || ||||| || ||||||||||| | |||||| ||||||||||| Sbjct: 242 gcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacaggggccc 183 Query: 517 ggtgctgaactcctnctcct 536 ||| ||||||||| ||||| Sbjct: 182 cgtgttgaactcctcctcct 163
>gb|AY087177.1| Arabidopsis thaliana clone 32457 mRNA, complete sequence Length = 646 Score = 89.7 bits (45), Expect = 1e-14 Identities = 195/245 (79%) Strand = Plus / Minus Query: 254 ttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaac 313 ||||||||||| || || || ||||| ||||| || || |||||||||||||||||||| Sbjct: 446 ttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgatgaat 387 Query: 314 ctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtc 373 | || |||| || ||||| || |||||||| ||||| || || || |||||||||||| Sbjct: 386 cgatctctgttaacaggaagagctttcttctttccttttccggttttcggaacctcagtc 327 Query: 374 cacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcatgcga 433 ||||| || || || || || |||||||||||||| || | |||||| || || | || Sbjct: 326 cacatttctctgacattttcaagaaccatgttgcagtgcctgtcaaaagccctaactcgg 267 Query: 434 ccaagtagcttcttgttgttccggcagttgataagtacctgggtattgttcttgacgctc 493 ||||| || ||| ||||||| ||||| ||||| | ||||| || || ||||| || ||| Sbjct: 266 ccaaggagtttcctgttgttacggcaattgatcaacacctgagtgttattcttaacactc 207 Query: 494 atcat 498 ||||| Sbjct: 206 atcat 202
>ref|NM_026943.1| Mus musculus small nuclear ribonucleoprotein D2 (Snrpd2), mRNA Length = 508 Score = 87.7 bits (44), Expect = 4e-14 Identities = 173/216 (80%) Strand = Plus / Minus Query: 274 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 333 |||||||||||| ||||| |||||||||||| |||| | | ||||||||| || || Sbjct: 376 gatgaccgagtccccgcgcaggaacatcttggagatgtagcggtccttgttgacaggctt 317 Query: 334 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 393 || ||||||||||| ||||| |||| ||||||||||||||||||||| | || || || Sbjct: 316 ggatttcttcttgcccttgccgctcttgggaacctcagtccacatctccttcacattttc 257 Query: 394 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 453 || ||||||||||| || | |||||| || ||| || || || |||||||||||||| Sbjct: 256 cagcaccatgttgcagtgcctgtcaaaggccttcacccggcccagcagcttcttgttgtt 197 Query: 454 ccggcagttgataagtacctgggtattgttcttgac 489 || ||||| || || || || || ||||||||||| Sbjct: 196 gcgacagttaatgagcacttgcgtgttgttcttgac 161
>dbj|AK088105.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430004E09 product:small nuclear ribonucleoprotein D2, full insert sequence Length = 467 Score = 87.7 bits (44), Expect = 4e-14 Identities = 173/216 (80%) Strand = Plus / Minus Query: 274 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 333 |||||||||||| ||||| |||||||||||| |||| | | ||||||||| || || Sbjct: 355 gatgaccgagtccccgcgcaggaacatcttggagatgtagcggtccttgttgacaggctt 296 Query: 334 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 393 || ||||||||||| ||||| |||| ||||||||||||||||||||| | || || || Sbjct: 295 ggatttcttcttgcccttgccgctcttgggaacctcagtccacatctccttcacattttc 236 Query: 394 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 453 || ||||||||||| || | |||||| || ||| || || || |||||||||||||| Sbjct: 235 cagcaccatgttgcagtgcctgtcaaaggccttcacccggcccagcagcttcttgttgtt 176 Query: 454 ccggcagttgataagtacctgggtattgttcttgac 489 || ||||| || || || || || ||||||||||| Sbjct: 175 gcgacagttaatgagcacttgcgtgttgttcttgac 140
>dbj|AK045968.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230328B02 product:small nuclear ribonucleoprotein D2, full insert sequence Length = 462 Score = 87.7 bits (44), Expect = 4e-14 Identities = 173/216 (80%) Strand = Plus / Minus Query: 274 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 333 |||||||||||| ||||| |||||||||||| |||| | | ||||||||| || || Sbjct: 351 gatgaccgagtccccgcgcaggaacatcttggagatgtagcggtccttgttgacaggctt 292 Query: 334 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 393 || ||||||||||| ||||| |||| ||||||||||||||||||||| | || || || Sbjct: 291 ggatttcttcttgcccttgccgctcttgggaacctcagtccacatctccttcacattttc 232 Query: 394 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 453 || ||||||||||| || | |||||| || ||| || || || |||||||||||||| Sbjct: 231 cagcaccatgttgcagtgcctgtcaaaggccttcacccggcccagcagcttcttgttgtt 172 Query: 454 ccggcagttgataagtacctgggtattgttcttgac 489 || ||||| || || || || || ||||||||||| Sbjct: 171 gcgacagttaatgagcacttgcgtgttgttcttgac 136
>dbj|AK007389.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length enriched library, clone:1810009A06 product:small nuclear ribonucleoprotein D2, full insert sequence Length = 467 Score = 87.7 bits (44), Expect = 4e-14 Identities = 173/216 (80%) Strand = Plus / Minus Query: 274 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 333 |||||||||||| ||||| |||||||||||| |||| | | ||||||||| || || Sbjct: 355 gatgaccgagtccccgcgcaggaacatcttggagatgtagcggtccttgttgacaggctt 296 Query: 334 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 393 || ||||||||||| ||||| |||| ||||||||||||||||||||| | || || || Sbjct: 295 ggatttcttcttgcccttgccgctcttgggaacctcagtccacatctccttcacattttc 236 Query: 394 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 453 || ||||||||||| || | |||||| || ||| || || || |||||||||||||| Sbjct: 235 cagcaccatgttgcagtgcctgtcaaaggccttcacccggcccagcagcttcttgttgtt 176 Query: 454 ccggcagttgataagtacctgggtattgttcttgac 489 || ||||| || || || || || ||||||||||| Sbjct: 175 gcgacagttaatgagcacttgcgtgttgttcttgac 140
>gb|BC051208.1| Mus musculus small nuclear ribonucleoprotein D2, mRNA (cDNA clone MGC:62953 IMAGE:1510565), complete cds Length = 489 Score = 87.7 bits (44), Expect = 4e-14 Identities = 173/216 (80%) Strand = Plus / Minus Query: 274 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 333 |||||||||||| ||||| |||||||||||| |||| | | ||||||||| || || Sbjct: 355 gatgaccgagtccccgcgcaggaacatcttggagatgtagcggtccttgttgacaggctt 296 Query: 334 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 393 || ||||||||||| ||||| |||| ||||||||||||||||||||| | || || || Sbjct: 295 ggatttcttcttgcccttgccgctcttgggaacctcagtccacatctccttcacattttc 236 Query: 394 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 453 || ||||||||||| || | |||||| || ||| || || || |||||||||||||| Sbjct: 235 cagcaccatgttgcagtgcctgtcaaaggccttcacccggcccagcagcttcttgttgtt 176 Query: 454 ccggcagttgataagtacctgggtattgttcttgac 489 || ||||| || || || || || ||||||||||| Sbjct: 175 gcgacagttaatgagcacttgcgtgttgttcttgac 140
>gb|BC043014.1| Mus musculus small nuclear ribonucleoprotein D2, mRNA (cDNA clone MGC:57881 IMAGE:5683364), complete cds Length = 508 Score = 87.7 bits (44), Expect = 4e-14 Identities = 173/216 (80%) Strand = Plus / Minus Query: 274 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 333 |||||||||||| ||||| |||||||||||| |||| | | ||||||||| || || Sbjct: 376 gatgaccgagtccccgcgcaggaacatcttggagatgtagcggtccttgttgacaggctt 317 Query: 334 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 393 || ||||||||||| ||||| |||| ||||||||||||||||||||| | || || || Sbjct: 316 ggatttcttcttgcccttgccgctcttgggaacctcagtccacatctccttcacattttc 257 Query: 394 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 453 || ||||||||||| || | |||||| || ||| || || || |||||||||||||| Sbjct: 256 cagcaccatgttgcagtgcctgtcaaaggccttcacccggcccagcagcttcttgttgtt 197 Query: 454 ccggcagttgataagtacctgggtattgttcttgac 489 || ||||| || || || || || ||||||||||| Sbjct: 196 gcgacagttaatgagcacttgcgtgttgttcttgac 161
>gb|AY042797.1| Arabidopsis thaliana small nuclear ribonucleoprotein-like protein (F26K9.270) mRNA, complete cds Length = 541 Score = 85.7 bits (43), Expect = 2e-13 Identities = 127/155 (81%) Strand = Plus / Minus Query: 254 ttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaac 313 ||||||||||| || || || ||||| ||||| || || |||||||||||||||||||| Sbjct: 425 ttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgatgaat 366 Query: 314 ctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtc 373 | || |||| || ||||| || |||||||| ||||| || || || |||||||||||| Sbjct: 365 cgatctctgttaacaggaagagctttcttctttccttttccggttttcggaacctcagtc 306 Query: 374 cacatctccctaacgttctcgagaaccatgttgca 408 ||||| || || || || || |||||||||||||| Sbjct: 305 cacatttctctgacattttcaagaaccatgttgca 271
>emb|CT963111.1| Medicago truncatula chromosome 5 clone mth2-43h1, COMPLETE SEQUENCE Length = 120939 Score = 81.8 bits (41), Expect = 3e-12 Identities = 98/117 (83%) Strand = Plus / Plus Query: 252 atttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatga 311 ||||||||||||| |||||||||||||| || || || || || ||||| ||||| |||| Sbjct: 92833 atttggggttcctaagaacaatgatgacagaatctccacgaagaaacattttgcttatga 92892 Query: 312 acctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacct 368 | || || ||||| ||||| | ||||| ||||| ||||| |||||||||||||||| Sbjct: 92893 atctatctttgtttactggctgagcctttttctttcctttaccagtctttggaacct 92949
>gb|AC131120.4| Mus musculus BAC clone RP24-547N4 from 10, complete sequence Length = 228657 Score = 79.8 bits (40), Expect = 1e-11 Identities = 172/216 (79%) Strand = Plus / Minus Query: 274 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 333 ||||||| |||| ||||| |||||||||||| |||| | | ||||||||| || || Sbjct: 132117 gatgaccaagtccccgcgcaggaacatcttggagatgtagcggtccttgttgacaggctt 132058 Query: 334 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 393 || ||||||||||| ||||| |||| ||||||||||||||||||||| | || || || Sbjct: 132057 ggatttcttcttgcccttgccgctcttgggaacctcagtccacatctccttcacattttc 131998 Query: 394 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 453 || ||||||||||| || | |||||| || ||| || || || |||||||||||||| Sbjct: 131997 cagcaccatgttgcagtgcctgtcaaaggccttcacccggcccagcagcttcttgttgtt 131938 Query: 454 ccggcagttgataagtacctgggtattgttcttgac 489 || ||||| || || || || || ||||||||||| Sbjct: 131937 gcgacagttaatgagcacttgtgtgttgttcttgac 131902
>gb|AC145199.3| Mus musculus BAC clone RP23-173N12 from chromosome 7, complete sequence Length = 220892 Score = 77.8 bits (39), Expect = 4e-11 Identities = 111/135 (82%) Strand = Plus / Plus Query: 274 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 333 |||||||||||| ||||| |||||||||||| |||| | | ||||||||| || || Sbjct: 57248 gatgaccgagtccccgcgcaggaacatcttggagatgtagcggtccttgttgacaggctt 57307 Query: 334 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 393 || ||||||||||| ||||| |||| ||||||||||||||||||||| | || || || Sbjct: 57308 ggatttcttcttgcccttgccgctcttgggaacctcagtccacatctccttcacattttc 57367 Query: 394 gagaaccatgttgca 408 || ||||||||||| Sbjct: 57368 cagcaccatgttgca 57382
>ref|XM_214847.2| PREDICTED: Rattus norvegicus small nuclear ribonucleoprotein D2 (predicted) (Snrpd2_predicted), mRNA Length = 537 Score = 71.9 bits (36), Expect = 2e-09 Identities = 150/188 (79%) Strand = Plus / Minus Query: 275 atgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaagg 334 ||||| ||||| ||||| |||||||||||| |||| | | ||||||||| || || | Sbjct: 394 atgactgagtccccgcgcaggaacatcttggagatgtagcggtccttgttgacaggcttg 335 Query: 335 gccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcg 394 | |||||||||||| ||||| |||| || |||||||||||||||||| | || || || Sbjct: 334 gacttcttcttgcccttgccgctcttggggacctcagtccacatctccttcacattttcc 275 Query: 395 agaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgttc 454 || ||||||||||| || | |||||| || ||| || || || |||||||||||||| Sbjct: 274 agcaccatgttgcagtgcctgtcaaaggccttcacccggcccaggagcttcttgttgttt 215 Query: 455 cggcagtt 462 || ||||| Sbjct: 214 cgacagtt 207
>ref|NM_001017582.1| Danio rerio zgc:110732 (zgc:110732), mRNA Length = 756 Score = 69.9 bits (35), Expect = 1e-08 Identities = 179/227 (78%) Strand = Plus / Minus Query: 257 gggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaacctg 316 |||||||| || || | ||||||||||||||| | |||||||||||| |||| | | Sbjct: 426 gggttcctcagcaccacgatgaccgagtcgcctctcaggaacatcttggagatgtagcga 367 Query: 317 tccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtccac 376 || ||||||||||| | |||||||||||||||||| |||| || ||||| |||||| Sbjct: 366 tctttgttcactggctttgacttcttcttgcctttgccgctcttgggcacctctgtccac 307 Query: 377 atctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcatgcgacca 436 || || | || ||||| |||||||| || ||||| | ||| |||||| | | | || Sbjct: 306 atttctttcacattctccagaaccatattacaatgcctgtcgaatgctttgactctgccc 247 Query: 437 agtagcttcttgttgttccggcagttgataagtacctgggtattgtt 483 || |||||||||||||| ||||||||||| || ||||| || ||||| Sbjct: 246 agcagcttcttgttgttgcggcagttgatgaggacctgtgtgttgtt 200
>gb|AC005309.3| Arabidopsis thaliana chromosome 2 clone F17A22 map CIC06C03, complete sequence Length = 106355 Score = 69.9 bits (35), Expect = 1e-08 Identities = 98/119 (82%) Strand = Plus / Minus Query: 250 tcatttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgat 309 |||||| || ||||| || || || ||||||||||| || || || ||||||||||| || Sbjct: 5867 tcattttggattcctgaggacgataatgaccgagtctccacgtagaaacatcttgcttat 5808 Query: 310 gaacctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacct 368 ||||| || ||||||| ||||| || |||||||||||||| ||||| || ||||||| Sbjct: 5807 gaaccgatctctgttcaccggaagtgctttcttcttgcctttcccagttttcggaacct 5749 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 365 acctcagtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgct 424 ||||||||||||||||| || || || || |||||||||||||| || | |||||| || Sbjct: 5670 acctcagtccacatctctctgacattttcaagaaccatgttgcagtgtctgtcaaacgcc 5611 Query: 425 ctcatgcgaccaagtagcttcttgttgttccggcagttgat 465 |||| || ||||| || ||| ||||||||||||| ||||| Sbjct: 5610 ctcactcgcccaagaagtttcctgttgttccggcaattgat 5570
>gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B22 map CIC06C03, complete sequence Length = 98937 Score = 69.9 bits (35), Expect = 1e-08 Identities = 98/119 (82%) Strand = Plus / Plus Query: 250 tcatttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgat 309 |||||| || ||||| || || || ||||||||||| || || || ||||||||||| || Sbjct: 10209 tcattttggattcctgaggacgataatgaccgagtctccacgtagaaacatcttgcttat 10268 Query: 310 gaacctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacct 368 ||||| || ||||||| ||||| || |||||||||||||| ||||| || ||||||| Sbjct: 10269 gaaccgatctctgttcaccggaagtgctttcttcttgcctttcccagttttcggaacct 10327 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 365 acctcagtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgct 424 ||||||||||||||||| || || || || |||||||||||||| || | |||||| || Sbjct: 10406 acctcagtccacatctctctgacattttcaagaaccatgttgcagtgtctgtcaaacgcc 10465 Query: 425 ctcatgcgaccaagtagcttcttgttgttccggcagttgat 465 |||| || ||||| || ||| ||||||||||||| ||||| Sbjct: 10466 ctcactcgcccaagaagtttcctgttgttccggcaattgat 10506
>ref|XM_694891.1| PREDICTED: Danio rerio similar to small nuclear ribonucleoprotein D2 (LOC571315), mRNA Length = 745 Score = 69.9 bits (35), Expect = 1e-08 Identities = 179/227 (78%) Strand = Plus / Minus Query: 257 gggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaacctg 316 |||||||| || || | ||||||||||||||| | |||||||||||| |||| | | Sbjct: 438 gggttcctcagcaccacgatgaccgagtcgcctctcaggaacatcttggagatgtagcga 379 Query: 317 tccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtccac 376 || ||||||||||| | |||||||||||||||||| |||| || ||||| |||||| Sbjct: 378 tctttgttcactggctttgacttcttcttgcctttgccgctcttgggcacctctgtccac 319 Query: 377 atctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcatgcgacca 436 || || | || ||||| |||||||| || ||||| | ||| |||||| | | | || Sbjct: 318 atttctttcacattctccagaaccatattacaatgcctgtcgaatgctttgactctgccc 259 Query: 437 agtagcttcttgttgttccggcagttgataagtacctgggtattgtt 483 || |||||||||||||| ||||||||||| || ||||| || ||||| Sbjct: 258 agcagcttcttgttgttgcggcagttgatgaggacctgtgtgttgtt 212
>ref|XM_694863.1| PREDICTED: Danio rerio similar to small nuclear ribonucleoprotein D2 (LOC571288), mRNA Length = 745 Score = 69.9 bits (35), Expect = 1e-08 Identities = 179/227 (78%) Strand = Plus / Minus Query: 257 gggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaacctg 316 |||||||| || || | ||||||||||||||| | |||||||||||| |||| | | Sbjct: 438 gggttcctcagcaccacgatgaccgagtcgcctctcaggaacatcttggagatgtagcga 379 Query: 317 tccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtccac 376 || ||||||||||| | |||||||||||||||||| |||| || ||||| |||||| Sbjct: 378 tctttgttcactggctttgacttcttcttgcctttgccgctcttgggcacctctgtccac 319 Query: 377 atctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcatgcgacca 436 || || | || ||||| |||||||| || ||||| | ||| |||||| | | | || Sbjct: 318 atttctttcacattctccagaaccatattacaatgcctgtcgaatgctttgactctgccc 259 Query: 437 agtagcttcttgttgttccggcagttgataagtacctgggtattgtt 483 || |||||||||||||| ||||||||||| || ||||| || ||||| Sbjct: 258 agcagcttcttgttgttgcggcagttgatgaggacctgtgtgttgtt 212
>gb|BC093003.1| Danio rerio zgc:110732, mRNA (cDNA clone MGC:110732 IMAGE:7177415), complete cds Length = 756 Score = 69.9 bits (35), Expect = 1e-08 Identities = 179/227 (78%) Strand = Plus / Minus Query: 257 gggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaacctg 316 |||||||| || || | ||||||||||||||| | |||||||||||| |||| | | Sbjct: 426 gggttcctcagcaccacgatgaccgagtcgcctctcaggaacatcttggagatgtagcga 367 Query: 317 tccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtccac 376 || ||||||||||| | |||||||||||||||||| |||| || ||||| |||||| Sbjct: 366 tctttgttcactggctttgacttcttcttgcctttgccgctcttgggcacctctgtccac 307 Query: 377 atctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcatgcgacca 436 || || | || ||||| |||||||| || ||||| | ||| |||||| | | | || Sbjct: 306 atttctttcacattctccagaaccatattacaatgcctgtcgaatgctttgactctgccc 247 Query: 437 agtagcttcttgttgttccggcagttgataagtacctgggtattgtt 483 || |||||||||||||| ||||||||||| || ||||| || ||||| Sbjct: 246 agcagcttcttgttgttgcggcagttgatgaggacctgtgtgttgtt 200
>ref|NM_141388.2| Drosophila melanogaster CG1249-RA (CG1249), mRNA Length = 765 Score = 67.9 bits (34), Expect = 4e-08 Identities = 81/97 (83%) Strand = Plus / Minus Query: 440 agcttcttgttgttccggcagttgataagtacctgggtattgttcttgacgctcatcatg 499 |||||||||||||| ||||||||||| || |||||||| |||||||| ||| | | || Sbjct: 275 agcttcttgttgttgcggcagttgatgagcacctgggtgttgttcttcacggactgcgtg 216 Query: 500 agcagggacaggggcccggtgctgaactcctnctcct 536 |||| |||||| || |||||| | ||||||| ||||| Sbjct: 215 agcacggacagcgggccggtgttaaactcctcctcct 179
>gb|AC016445.4| Drosophila melanogaster, chromosome 3R, region 83D-83F, BAC clone BACR19H03, complete sequence Length = 157141 Score = 67.9 bits (34), Expect = 4e-08 Identities = 81/97 (83%) Strand = Plus / Minus Query: 440 agcttcttgttgttccggcagttgataagtacctgggtattgttcttgacgctcatcatg 499 |||||||||||||| ||||||||||| || |||||||| |||||||| ||| | | || Sbjct: 44808 agcttcttgttgttgcggcagttgatgagcacctgggtgttgttcttcacggactgcgtg 44749 Query: 500 agcagggacaggggcccggtgctgaactcctnctcct 536 |||| |||||| || |||||| | ||||||| ||||| Sbjct: 44748 agcacggacagcgggccggtgttaaactcctcctcct 44712
>ref|NM_073603.2| Caenorhabditis elegans Small Nuclear Ribonucleoprotein family member (snr-4) (snr-4) mRNA, complete cds Length = 565 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 335 gccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcg 394 ||||||||||| || || ||||||||||| || ||||||||||| ||| | || || ||| Sbjct: 298 gccttcttctttccctttccagtctttggcacttcagtccacatttccttcacattttcg 239 Query: 395 agaaccatgttgcaatgacggtcaaa 420 || |||||||||||||| | |||||| Sbjct: 238 aggaccatgttgcaatgtctgtcaaa 213
>gb|AY069315.1| Drosophila melanogaster LD03002 full insert cDNA Length = 773 Score = 67.9 bits (34), Expect = 4e-08 Identities = 81/97 (83%) Strand = Plus / Minus Query: 440 agcttcttgttgttccggcagttgataagtacctgggtattgttcttgacgctcatcatg 499 |||||||||||||| ||||||||||| || |||||||| |||||||| ||| | | || Sbjct: 249 agcttcttgttgttgcggcagttgatgagcacctgggtgttgttcttcacggactgcgtg 190 Query: 500 agcagggacaggggcccggtgctgaactcctnctcct 536 |||| |||||| || |||||| | ||||||| ||||| Sbjct: 189 agcacggacagcgggccggtgttaaactcctcctcct 153
>gb|AE003675.4| Drosophila melanogaster chromosome 3R, section 9 of 118 of the complete sequence Length = 145958 Score = 67.9 bits (34), Expect = 4e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 440 agcttcttgttgttccggcagttgataagtacctgggtattgttcttgacgctcatcatg 499 |||||||||||||| ||||||||||| || |||||||| |||||||| ||| | | || Sbjct: 11167 agcttcttgttgttgcggcagttgatgagcacctgggtgttgttcttcacggactgcgtg 11226 Query: 500 agcagggacaggggcccggtgctgaactcctnctcct 536 |||| |||||| || |||||| | ||||||| ||||| Sbjct: 11227 agcacggacagcgggccggtgttaaactcctcctcct 11263
>emb|BX936185.1| Gallus gallus finished cDNA, clone ChEST146i23 Length = 446 Score = 65.9 bits (33), Expect = 1e-07 Identities = 120/149 (80%) Strand = Plus / Minus Query: 338 ttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgaga 397 ||||| ||||||||||| | || || ||||| |||||||||||| | |||||||| || Sbjct: 334 ttctttttgcctttgccgcttttcgggacctccgtccacatctccttcacgttctccagg 275 Query: 398 accatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgttccgg 457 ||||| ||||| || | ||| || || | | ||| || || |||||||||||||| ||| Sbjct: 274 accatattgcagtgcctgtcgaaggccttgacgcggcccagcagcttcttgttgttgcgg 215 Query: 458 cagttgataagtacctgggtattgttctt 486 |||||||| || ||||| || |||||||| Sbjct: 214 cagttgatcagcacctgcgtgttgttctt 186
>emb|BX933865.1| Gallus gallus finished cDNA, clone ChEST916l7 Length = 427 Score = 65.9 bits (33), Expect = 1e-07 Identities = 120/149 (80%) Strand = Plus / Minus Query: 338 ttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgaga 397 ||||| ||||||||||| | || || ||||| |||||||||||| | |||||||| || Sbjct: 315 ttctttttgcctttgccgcttttcgggacctccgtccacatctccttcacgttctccagg 256 Query: 398 accatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgttccgg 457 ||||| ||||| || | ||| || || | | ||| || || |||||||||||||| ||| Sbjct: 255 accatattgcagtgcctgtcgaaggccttgacgcggcccagcagcttcttgttgttgcgg 196 Query: 458 cagttgataagtacctgggtattgttctt 486 |||||||| || ||||| || |||||||| Sbjct: 195 cagttgatcagcacctgcgtgttgttctt 167
>emb|Z78012.1|CEC52E4 Caenorhabditis elegans Cosmid C52E4, complete sequence Length = 33089 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 335 gccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcg 394 ||||||||||| || || ||||||||||| || ||||||||||| ||| | || || ||| Sbjct: 14787 gccttcttctttccctttccagtctttggcacttcagtccacatttccttcacattttcg 14846 Query: 395 agaaccatgttgcaatg 411 || |||||||||||||| Sbjct: 14847 aggaccatgttgcaatg 14863
>gb|AY949614.1| Pongo pygmaeus orthologous to Homo sapiens retroposed sequence ENSG00000148667 genomic sequence Length = 357 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 337 cttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgag 396 |||||||||||| ||||| |||| || |||||||||||||||||| | || ||||| || Sbjct: 258 cttcttcttgcccttgccgctcttaggtacctcagtccacatctccttcacattctccag 199 Query: 397 aaccatgttgca 408 ||||||||||| Sbjct: 198 caccatgttgca 187
>gb|AC128649.5| Homo sapiens 12 BAC RP11-728G4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167071 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 337 cttcttcttgcctttgccagtctttggaacctcagtccacatctcc 382 |||||||||||| |||||| |||| || |||||||||||||||||| Sbjct: 80984 cttcttcttgccattgccactcttgggtacctcagtccacatctcc 80939
>gb|AC128657.2| Homo sapiens 12 BAC RP11-1079J22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 60001 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 337 cttcttcttgcctttgccagtctttggaacctcagtccacatctcc 382 |||||||||||| |||||| |||| || |||||||||||||||||| Sbjct: 28380 cttcttcttgccattgccactcttgggtacctcagtccacatctcc 28425
>ref|XM_940474.1| PREDICTED: Homo sapiens similar to small nuclear ribonucleoprotein D2 (LOC390349), mRNA Length = 293 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 337 cttcttcttgcctttgccagtctttggaacctcagtccacatctcc 382 |||||||||||| |||||| |||| || |||||||||||||||||| Sbjct: 102 cttcttcttgccattgccactcttgggtacctcagtccacatctcc 57
>ref|XM_372472.2| PREDICTED: Homo sapiens similar to small nuclear ribonucleoprotein D2 (LOC390349), mRNA Length = 293 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 337 cttcttcttgcctttgccagtctttggaacctcagtccacatctcc 382 |||||||||||| |||||| |||| || |||||||||||||||||| Sbjct: 102 cttcttcttgccattgccactcttgggtacctcagtccacatctcc 57
>gb|AC084532.1|CBRG22L08 Caenorhabditis briggsae cosmid G22L08, complete sequence Length = 34558 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 335 gccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcg 394 ||||||||||| || || |||||||| || || || ||||||||||| | ||||||||| Sbjct: 12273 gccttcttctttccctttccagtcttcgggacttctgtccacatctctttgacgttctcg 12332 Query: 395 agaaccatgttgca 408 || ||||||||||| Sbjct: 12333 agcaccatgttgca 12346
>gb|AC154808.2| Mus musculus BAC clone RP24-512K19 from chromosome 13, complete sequence Length = 187080 Score = 58.0 bits (29), Expect = 4e-05 Identities = 122/153 (79%) Strand = Plus / Plus Query: 337 cttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgag 396 |||||||||||| ||||| |||| || |||||||||||||||||| | || || || || Sbjct: 81242 cttcttcttgcccttgccgctcttggggacctcagtccacatctccttcacattttccag 81301 Query: 397 aaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgttccg 456 ||||||||||| || | |||||| || ||| || || || |||||||| ||||| || Sbjct: 81302 caccatgttgcagtgcctgtcaaaggccttcacccggcccagcagcttcttcttgttgcg 81361 Query: 457 gcagttgataagtacctgggtattgttcttgac 489 ||||| || || || || || ||||||||||| Sbjct: 81362 acagttaatgagcacttgtgtgttgttcttgac 81394
>ref|XM_521555.1| PREDICTED: Pan troglodytes similar to small nuclear ribonucleoprotein polypeptide D2; snRNP core protein D2; small nuclear ribonucleoprotein D2 polypeptide (16.5kD) (LOC466153), mRNA Length = 354 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 340 cttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgagaac 399 ||||||||| ||||| |||| || |||||||||||||||||| | | |||||| || || Sbjct: 255 cttcttgcccttgccgctcttgggtacctcagtccacatctccttcatgttctccagcac 196 Query: 400 catgttgca 408 ||||||||| Sbjct: 195 catgttgca 187
>ref|XM_982574.1| PREDICTED: Mus musculus similar to small nuclear ribonucleoprotein D2 (LOC432760), mRNA Length = 475 Score = 58.0 bits (29), Expect = 4e-05 Identities = 122/153 (79%) Strand = Plus / Minus Query: 337 cttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgag 396 |||||||||||| ||||| |||| || |||||||||||||||||| | || || || || Sbjct: 290 cttcttcttgcccttgccgctcttggggacctcagtccacatctccttcacattttccag 231 Query: 397 aaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgttccg 456 ||||||||||| || | |||||| || ||| || || || |||||||| ||||| || Sbjct: 230 caccatgttgcagtgcctgtcaaaggccttcacccggcccagcagcttcttcttgttgcg 171 Query: 457 gcagttgataagtacctgggtattgttcttgac 489 ||||| || || || || || ||||||||||| Sbjct: 170 acagttaatgagcacttgtgtgttgttcttgac 138
>ref|XM_484260.3| PREDICTED: Mus musculus similar to small nuclear ribonucleoprotein D2 (LOC432760), mRNA Length = 475 Score = 58.0 bits (29), Expect = 4e-05 Identities = 122/153 (79%) Strand = Plus / Minus Query: 337 cttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgag 396 |||||||||||| ||||| |||| || |||||||||||||||||| | || || || || Sbjct: 290 cttcttcttgcccttgccgctcttggggacctcagtccacatctccttcacattttccag 231 Query: 397 aaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgttccg 456 ||||||||||| || | |||||| || ||| || || || |||||||| ||||| || Sbjct: 230 caccatgttgcagtgcctgtcaaaggccttcacccggcccagcagcttcttcttgttgcg 171 Query: 457 gcagttgataagtacctgggtattgttcttgac 489 ||||| || || || || || ||||||||||| Sbjct: 170 acagttaatgagcacttgtgtgttgttcttgac 138
>ref|XM_915862.2| PREDICTED: Mus musculus similar to small nuclear ribonucleoprotein D2 (LOC432760), mRNA Length = 475 Score = 58.0 bits (29), Expect = 4e-05 Identities = 122/153 (79%) Strand = Plus / Minus Query: 337 cttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgag 396 |||||||||||| ||||| |||| || |||||||||||||||||| | || || || || Sbjct: 290 cttcttcttgcccttgccgctcttggggacctcagtccacatctccttcacattttccag 231 Query: 397 aaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgttccg 456 ||||||||||| || | |||||| || ||| || || || |||||||| ||||| || Sbjct: 230 caccatgttgcagtgcctgtcaaaggccttcacccggcccagcagcttcttcttgttgcg 171 Query: 457 gcagttgataagtacctgggtattgttcttgac 489 ||||| || || || || || ||||||||||| Sbjct: 170 acagttaatgagcacttgtgtgttgttcttgac 138
>ref|XM_387194.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07018.1) partial mRNA Length = 468 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 371 gtccacatctccctaacgttctcgagaaccatgttgcaatg 411 |||||||| ||| | |||||||||||||||||||||||||| Sbjct: 356 gtccacatttccttgacgttctcgagaaccatgttgcaatg 316 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 296 aacatcttgctgatgaacctgtccttgttcactgg 330 ||||||||||||||||||| |||||||| ||||| Sbjct: 428 aacatcttgctgatgaaccgatccttgttgactgg 394
>emb|AL390206.14| Human DNA sequence from clone RP11-478K7 on chromosome 10 Contains a small nuclear ribonucleoprotein D2 polypeptide 16.5kDa (SNRPD2) pseudogene and a novel gene (FLJ35900), complete sequence Length = 113039 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 340 cttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgagaac 399 ||||||||| ||||| |||| || |||||||||||| ||||| | |||||||| || || Sbjct: 82759 cttcttgcccttgccgctcttgggtacctcagtccacgtctccttcacgttctccagcac 82700 Query: 400 catgttgca 408 ||||||||| Sbjct: 82699 catgttgca 82691
>emb|BX027975.1|CNS08TQZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA41DD12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 505 Score = 58.0 bits (29), Expect = 4e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 371 gtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcatg 430 |||||||| ||| | ||||| || || ||||||||||| || || ||||| ||| ||| | Sbjct: 191 gtccacatttccttcacgttttccagcaccatgttgcagtggcgatcaaacgctttcacg 250 Query: 431 cgaccaagtagcttcttgttgttccggcagttgataagtacctgggtattgtt 483 || || || ||||| |||||||| |||||||| || |||||||| || ||||| Sbjct: 251 cgccccagcagctttttgttgttgcggcagtttatcagtacctgcgtgttgtt 303
>emb|BX027974.1|CNS08TQY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA41DD12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 523 Score = 58.0 bits (29), Expect = 4e-05 Identities = 92/113 (81%) Strand = Plus / Minus Query: 371 gtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcatg 430 |||||||| ||| | ||||| || || ||||||||||| || || ||||| ||| ||| | Sbjct: 292 gtccacatttccttcacgttttccagcaccatgttgcagtggcgatcaaacgctttcacg 233 Query: 431 cgaccaagtagcttcttgttgttccggcagttgataagtacctgggtattgtt 483 || || || ||||| |||||||| |||||||| || |||||||| || ||||| Sbjct: 232 cgccccagcagctttttgttgttgcggcagtttatcagtacctgcgtgttgtt 180
>ref|XM_937349.1| PREDICTED: Homo sapiens similar to small nuclear ribonucleoprotein D2 (LOC648295), mRNA Length = 356 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 340 cttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgagaac 399 ||||||||| ||||| |||| || |||||||||||| ||||| | |||||||| || || Sbjct: 257 cttcttgcccttgccgctcttgggtacctcagtccacgtctccttcacgttctccagcac 198 Query: 400 catgttgca 408 ||||||||| Sbjct: 197 catgttgca 189
>ref|XM_061427.2| PREDICTED: Homo sapiens similar to small nuclear ribonucleoprotein D2 (LOC119358), mRNA Length = 356 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 340 cttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgagaac 399 ||||||||| ||||| |||| || |||||||||||| ||||| | |||||||| || || Sbjct: 257 cttcttgcccttgccgctcttgggtacctcagtccacgtctccttcacgttctccagcac 198 Query: 400 catgttgca 408 ||||||||| Sbjct: 197 catgttgca 189
>ref|XM_318388.2| Anopheles gambiae str. PEST ENSANGP00000002741 (ENSANGG00000002272), partial mRNA Length = 417 Score = 58.0 bits (29), Expect = 4e-05 Identities = 92/113 (81%) Strand = Plus / Minus Query: 371 gtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcatg 430 |||||||| ||| | ||||| || || ||||||||||| || || ||||| ||| ||| | Sbjct: 218 gtccacatttccttcacgttttccagcaccatgttgcagtggcgatcaaacgctttcacg 159 Query: 431 cgaccaagtagcttcttgttgttccggcagttgataagtacctgggtattgtt 483 || || || ||||| |||||||| |||||||| || |||||||| || ||||| Sbjct: 158 cgccccagcagctttttgttgttgcggcagtttatcagtacctgcgtgttgtt 106
>gb|AC114675.9| Mus musculus chromosome 3, clone RP24-210G2, complete sequence Length = 153302 Score = 56.0 bits (28), Expect = 1e-04 Identities = 169/216 (78%) Strand = Plus / Plus Query: 274 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 333 |||||||||||| || || ||||| |||||| |||| | | ||||||||| || || Sbjct: 102422 gatgaccgagtccccacgcaggaatatcttggagatgtagcagtccttgttgacaggctt 102481 Query: 334 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 393 || |||||||||||| |||| |||| || |||||||||||||||||| | || || || Sbjct: 102482 ggacttcttcttgcccttgctgctcttggggacctcagtccacatctccttcacattttc 102541 Query: 394 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 453 || ||||||||||| || | |||||| || ||| || || || |||||||| ||||| Sbjct: 102542 cagcaccatgttgcagtgcctgtcaaaggccttcacccggcccagcagcttcttcttgtt 102601 Query: 454 ccggcagttgataagtacctgggtattgttcttgac 489 || ||||| || || || || || ||||||||||| Sbjct: 102602 gcgacagttaatgagcacttgcgtgttgttcttgac 102637
>ref|XM_905150.2| PREDICTED: Mus musculus similar to small nuclear ribonucleoprotein D2 (LOC631370), mRNA Length = 476 Score = 56.0 bits (28), Expect = 1e-04 Identities = 169/216 (78%) Strand = Plus / Minus Query: 274 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 333 |||||||||||| || || ||||| |||||| |||| | | ||||||||| || || Sbjct: 354 gatgaccgagtccccacgcaggaatatcttggagatgtagcagtccttgttgacaggctt 295 Query: 334 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 393 || |||||||||||| |||| |||| || |||||||||||||||||| | || || || Sbjct: 294 ggacttcttcttgcccttgctgctcttggggacctcagtccacatctccttcacattttc 235 Query: 394 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 453 || ||||||||||| || | |||||| || ||| || || || |||||||| ||||| Sbjct: 234 cagcaccatgttgcagtgcctgtcaaaggccttcacccggcccagcagcttcttcttgtt 175 Query: 454 ccggcagttgataagtacctgggtattgttcttgac 489 || ||||| || || || || || ||||||||||| Sbjct: 174 gcgacagttaatgagcacttgcgtgttgttcttgac 139
>ref|XM_619909.3| PREDICTED: Mus musculus similar to small nuclear ribonucleoprotein D2 (LOC545531), mRNA Length = 476 Score = 56.0 bits (28), Expect = 1e-04 Identities = 169/216 (78%) Strand = Plus / Minus Query: 274 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 333 |||||||||||| || || ||||| |||||| |||| | | ||||||||| || || Sbjct: 354 gatgaccgagtccccacgcaggaatatcttggagatgtagcagtccttgttgacaggctt 295 Query: 334 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 393 || |||||||||||| |||| |||| || |||||||||||||||||| | || || || Sbjct: 294 ggacttcttcttgcccttgctgctcttggggacctcagtccacatctccttcacattttc 235 Query: 394 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 453 || ||||||||||| || | |||||| || ||| || || || |||||||| ||||| Sbjct: 234 cagcaccatgttgcagtgcctgtcaaaggccttcacccggcccagcagcttcttcttgtt 175 Query: 454 ccggcagttgataagtacctgggtattgttcttgac 489 || ||||| || || || || || ||||||||||| Sbjct: 174 gcgacagttaatgagcacttgcgtgttgttcttgac 139
>ref|XM_576676.1| PREDICTED: Rattus norvegicus similar to small nuclear ribonucleoprotein polypeptide D2 (LOC501257), mRNA Length = 491 Score = 56.0 bits (28), Expect = 1e-04 Identities = 139/176 (78%) Strand = Plus / Minus Query: 287 ccgcggaggaacatcttgctgatgaacctgtccttgttcactggaagggccttcttcttg 346 ||||| |||||||||||| |||| | | ||||||||| || || || |||||||||| Sbjct: 321 ccgcgcaggaacatcttggagatgtagcggtccttgttgacaggcttggacttcttcttg 262 Query: 347 cctttgccagtctttggaacctcagtccacatctccctaacgttctcgagaaccatgttg 406 || ||||| |||| || ||||||||||| |||||| | || || || || ||||||||| Sbjct: 261 cccttgccgctcttggggacctcagtccatatctccttcacattttccagcaccatgttg 202 Query: 407 caatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgttccggcagtt 462 || || | |||||| || ||| || || || |||||||||||||| || ||||| Sbjct: 201 cagtgcctgtcaaaggccttcacccggcccaggagcttcttgttgtttcgacagtt 146
>gb|AC155339.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH015H17, complete sequence Length = 110885 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 254 ttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaac 313 ||||| ||||| || || |||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 20553 ttgggattcctaaggacgatgatgacggagtcaccacggagaaacatcttgctgatgaag 20612 Query: 314 ctgtccttgttcactggaagggccttcttcttgcctttgccagt 357 | || |||| || ||||| || |||||||| ||||| ||||| Sbjct: 20613 cgatctctgttgacgggaagagctttcttctttccttttccagt 20656 Score = 54.0 bits (27), Expect = 6e-04 Identities = 134/170 (78%) Strand = Plus / Plus Query: 365 acctcagtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgct 424 |||||||||||||| || || || || || |||||||||||||| || | ||| || || Sbjct: 20762 acctcagtccacatttctctgacattttcaagaaccatgttgcagtgcctgtcgaaagcc 20821 Query: 425 ctcatgcgaccaagtagcttcttgttgttccggcagttgataagtacctgggtattgttc 484 || | || ||||| || ||| ||||||| ||||||||||| | ||||| || |||||| Sbjct: 20822 ctaacacggccaaggagtttcctgttgttgcggcagttgatcaagacctgagtgttgttc 20881 Query: 485 ttgacgctcatcatgagcagggacaggggcccggtgctgaactcctnctc 534 || || |||||||| || | || ||||| || ||| ||||||||| ||| Sbjct: 20882 ttaacactcatcatcagaacagaaaggggtcccgtgttgaactcctcctc 20931
>gb|AC155335.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH001H24, complete sequence Length = 118144 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 254 ttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaac 313 ||||| ||||| || || |||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 106731 ttgggattcctaaggacgatgatgacggagtcaccacggagaaacatcttgctgatgaag 106790 Query: 314 ctgtccttgttcactggaagggccttcttcttgcctttgccagt 357 | || |||| || ||||| || |||||||| ||||| ||||| Sbjct: 106791 cgatctctgttgacgggaagagctttcttctttccttttccagt 106834 Score = 54.0 bits (27), Expect = 6e-04 Identities = 134/170 (78%) Strand = Plus / Plus Query: 365 acctcagtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgct 424 |||||||||||||| || || || || || |||||||||||||| || | ||| || || Sbjct: 106940 acctcagtccacatttctctgacattttcaagaaccatgttgcagtgcctgtcgaaagcc 106999 Query: 425 ctcatgcgaccaagtagcttcttgttgttccggcagttgataagtacctgggtattgttc 484 || | || ||||| || ||| ||||||| ||||||||||| | ||||| || |||||| Sbjct: 107000 ctaacacggccaaggagtttcctgttgttgcggcagttgatcaagacctgagtgttgttc 107059 Query: 485 ttgacgctcatcatgagcagggacaggggcccggtgctgaactcctnctc 534 || || |||||||| || | || ||||| || ||| ||||||||| ||| Sbjct: 107060 ttaacactcatcatcagaacagaaaggggtcccgtgttgaactcctcctc 107109
>emb|CT010488.9| Mouse DNA sequence from clone RP23-133A3 on chromosome 9, complete sequence Length = 219139 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 316 gtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtcca 375 ||||||||| || ||| || ||||||||| || ||| || ||||||| ||||||||||| Sbjct: 210694 gtccttgttgacaggattggacttcttcttacccttgacactctttgggacctcagtcca 210635 Query: 376 catctcc 382 ||||||| Sbjct: 210634 catctcc 210628
>emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome 3, BAC clone F26K9 Length = 110257 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 254 ttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaa 312 ||||||||||| || || || ||||| ||||| || || |||||||||||||||||||| Sbjct: 88705 ttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgatgaa 88763 Score = 46.1 bits (23), Expect = 0.14 Identities = 107/135 (79%) Strand = Plus / Plus Query: 364 aacctcagtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgc 423 ||||||||||||||| || || || || || |||||||||||||| || | |||||| || Sbjct: 88903 aacctcagtccacatttctctgacattttcaagaaccatgttgcagtgcctgtcaaaagc 88962 Query: 424 tctcatgcgaccaagtagcttcttgttgttccggcagttgataagtacctgggtattgtt 483 || | || ||||| || ||| ||||||| ||||| ||||| | ||||| || || || Sbjct: 88963 cctaactcggccaaggagtttcctgttgttacggcaattgatcaacacctgagtgttatt 89022 Query: 484 cttgacgctcatcat 498 ||| || |||||||| Sbjct: 89023 cttaacactcatcat 89037
>gb|AC155923.2| Mus musculus BAC clone RP24-488E11 from chromosome 9, complete sequence Length = 134932 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 316 gtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtcca 375 ||||||||| || ||| || ||||||||| || ||| || ||||||| ||||||||||| Sbjct: 2289 gtccttgttgacaggattggacttcttcttacccttgacactctttgggacctcagtcca 2230 Query: 376 catctcc 382 ||||||| Sbjct: 2229 catctcc 2223
>emb|AL928979.4| Zebrafish DNA sequence from clone DKEY-113G17, complete sequence Length = 193205 Score = 54.0 bits (27), Expect = 6e-04 Identities = 123/155 (79%) Strand = Plus / Plus Query: 257 gggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaacctg 316 |||||||| || || | ||||||||||||||| | |||||||||||| |||| | | Sbjct: 122811 gggttcctcagcaccacgatgaccgagtcgcctctcaggaacatcttggagatgtagcga 122870 Query: 317 tccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtccac 376 || ||||||||||| | |||||||||||||||||| |||| || ||||| |||||| Sbjct: 122871 tctttgttcactggctttgacttcttcttgcctttgccgctcttgggcacctctgtccac 122930 Query: 377 atctccctaacgttctcgagaaccatgttgcaatg 411 || || | || ||||| |||||||| || ||||| Sbjct: 122931 atttctttcacattctccagaaccatattacaatg 122965 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Plus Query: 440 agcttcttgttgttccggcagttgataagtacctgggtattgtt 483 |||||||||||||| ||||||||||| || ||||| || ||||| Sbjct: 126421 agcttcttgttgttgcggcagttgatgaggacctgtgtgttgtt 126464
>emb|BX663502.9| Zebrafish DNA sequence from clone CH211-202C21 in linkage group 18, complete sequence Length = 188674 Score = 54.0 bits (27), Expect = 6e-04 Identities = 123/155 (79%) Strand = Plus / Plus Query: 257 gggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaacctg 316 |||||||| || || | ||||||||||||||| | |||||||||||| |||| | | Sbjct: 100745 gggttcctcagcaccacgatgaccgagtcgcctctcaggaacatcttggagatgtagcga 100804 Query: 317 tccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtccac 376 || ||||||||||| | |||||||||||||||||| |||| || ||||| |||||| Sbjct: 100805 tctttgttcactggctttgacttcttcttgcctttgccgctcttgggcacctctgtccac 100864 Query: 377 atctccctaacgttctcgagaaccatgttgcaatg 411 || || | || ||||| |||||||| || ||||| Sbjct: 100865 atttctttcacattctccagaaccatattacaatg 100899 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Plus Query: 440 agcttcttgttgttccggcagttgataagtacctgggtattgtt 483 |||||||||||||| ||||||||||| || ||||| || ||||| Sbjct: 104174 agcttcttgttgttgcggcagttgatgaggacctgtgtgttgtt 104217
>emb|CT032728.1| Platynereis dumerilii EST IB0AAA32DE04FM1 Length = 699 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 440 agcttcttgttgttccggcagttgataagtacctgggtattgttcttgacg 490 |||||||||||||| | ||||||||| || ||||| || |||||||||||| Sbjct: 448 agcttcttgttgtttctgcagttgatgaggacctgtgtgttgttcttgacg 498
>ref|XM_323078.1| Neurospora crassa OR74A hypothetical protein (NCU03778.1) partial mRNA Length = 381 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 296 aacatcttgctgatgaacctgtccttgtt 324 |||||||||||||| |||||||||||||| Sbjct: 320 aacatcttgctgataaacctgtccttgtt 292
>ref|XM_956031.1| Neurospora crassa OR74A hypothetical protein (NCU03778.1) partial mRNA Length = 381 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 296 aacatcttgctgatgaacctgtccttgtt 324 |||||||||||||| |||||||||||||| Sbjct: 320 aacatcttgctgataaacctgtccttgtt 292
>emb|AL513466.1|NCB18D24 Neurospora crassa DNA linkage group V BAC contig B18D24 Length = 157180 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 296 aacatcttgctgatgaacctgtccttgtt 324 |||||||||||||| |||||||||||||| Sbjct: 129141 aacatcttgctgataaacctgtccttgtt 129169
>gb|AY949615.1| Hylobates lar orthologous to Homo sapiens retroposed sequence ENSG00000148667 genomic sequence Length = 357 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Minus Query: 337 cttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgag 396 |||||||||||| |||| |||| || |||||||||||||||||| | | |||||| || Sbjct: 258 cttcttcttgcccttgctgctcttgggtacctcagtccacatctccttcatgttctccag 199 Query: 397 aaccatgtt 405 |||||||| Sbjct: 198 caccatgtt 190
>gb|AY949613.1| Gorilla gorilla orthologous to Homo sapiens retroposed sequence ENSG00000148667 genomic sequence Length = 354 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Minus Query: 340 cttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgagaac 399 ||||| ||| ||||| |||| || ||||| |||||||||||| | |||||||| || || Sbjct: 255 cttctcgcccttgccgctcttgggtacctcggtccacatctccttcacgttctccagcac 196 Query: 400 catgttgca 408 ||||||||| Sbjct: 195 catgttgca 187
>gb|AY431899.1| Aedes aegypti ASAP ID: 35871 small nuclear ribonucleoprotein mRNA sequence Length = 630 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Minus Query: 446 ttgttgttccggcagttgataagtacctgggtattgttcttgac 489 |||||||| |||||||| || || ||||| |||||||||||||| Sbjct: 284 ttgttgttgcggcagtttatgagaacctgagtattgttcttgac 241
>ref|XM_755835.1| Ustilago maydis 521 hypothetical protein (UM04781.1) partial mRNA Length = 336 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Minus Query: 277 gaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgtt 324 |||||||||||| || |||||||||||| |||||| | ||||||||| Sbjct: 309 gaccgagtcgccacgaaggaacatcttggagatgaagcggtccttgtt 262
>ref|XM_748269.1| Aspergillus fumigatus Af293 small nuclear ribonucleoprotein SmD2 (Afu5g12910) partial mRNA Length = 369 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Minus Query: 284 tcgccgcggaggaacatcttgctgatgaacctgtccttgttcac 327 ||||| || |||||||||||||||||||| | ||||||||||| Sbjct: 341 tcgcctcgcaggaacatcttgctgatgaagcgatccttgttcac 298 Score = 44.1 bits (22), Expect = 0.55 Identities = 43/50 (86%) Strand = Plus / Minus Query: 371 gtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaa 420 ||||||||||| | ||||||||||| ||||| ||||| || |||||||| Sbjct: 266 gtccacatctctttcacgttctcgagcaccatattgcagtggcggtcaaa 217
>ref|XM_654314.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1802.2), mRNA Length = 222 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 367 ctcagtccacatctccctaacgttctcgagaaccatgtt 405 ||||||||||||||| | |||||||| ||||||||||| Sbjct: 126 ctcagtccacatctctttgacgttctcaagaaccatgtt 88
>emb|AL355384.6| Human DNA sequence from clone RP11-626C11 on chromosome 10 Contains a CpG island, complete sequence Length = 159305 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 90 caaactacaacactggaccagta 112 ||||||||||||||||||||||| Sbjct: 133381 caaactacaacactggaccagta 133403
>gb|AF526256.1| Chlamys farreri clone iolscfcl385ct402cn424 small nuclear ribonucleoprotein D2-like protein mRNA, complete cds Length = 575 Score = 46.1 bits (23), Expect = 0.14 Identities = 71/87 (81%) Strand = Plus / Minus Query: 338 ttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgaga 397 |||||||| || || || || ||||| || ||||||||||| ||| |||| || || | | Sbjct: 334 ttcttctttccctttcctgtttttggtacttcagtccacatttccttaacattttccaaa 275 Query: 398 accatgttgcaatgacggtcaaatgct 424 ||||| |||||||| | |||||||||| Sbjct: 274 accatattgcaatgcctgtcaaatgct 248
>dbj|AB225845.1| Aspergillus oryzae cDNA, contig sequence: AoEST2700 Length = 893 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 274 gatgaccgagtcgccgcggaggaacatcttgctgatgaa 312 |||||| ||||| || || |||||||||||||||||||| Sbjct: 371 gatgacggagtcaccacgcaggaacatcttgctgatgaa 333
>dbj|AB051115.1| Macaca fascicularis brain cDNA, clone:QccE-18667 Length = 1712 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 596 tgcggaaagggaaacaaaccaaa 618 ||||||||||||||||||||||| Sbjct: 588 tgcggaaagggaaacaaaccaaa 566
>ref|XM_361539.1| Magnaporthe grisea 70-15 hypothetical protein (MG04013.4) partial mRNA Length = 354 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 371 gtccacatctccctaacgttctcgagaaccatgttgca 408 |||||||||||| | ||||||||||| ||||| ||||| Sbjct: 242 gtccacatctccttcacgttctcgagcaccatattgca 205
>gb|AC113292.6| Mus musculus chromosome 15, clone RP23-418M3, complete sequence Length = 218109 Score = 44.1 bits (22), Expect = 0.55 Identities = 55/66 (83%) Strand = Plus / Minus Query: 343 cttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgagaaccat 402 |||||| ||||| |||| || |||||||||||||||||| | || || || || ||||| Sbjct: 147612 cttgcccttgccgctcttggggacctcagtccacatctccttcacattttccagcaccat 147553 Query: 403 gttgca 408 |||||| Sbjct: 147552 gttgca 147547
>ref|XM_505089.1| Yarrowia lipolytica CLIB122, YALI0F06644g predicted mRNA Length = 348 Score = 44.1 bits (22), Expect = 0.55 Identities = 43/50 (86%) Strand = Plus / Minus Query: 371 gtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaa 420 |||||||||||| | |||||||| || ||||||||| | || |||||||| Sbjct: 236 gtccacatctccttcacgttctccagcaccatgttggagtgccggtcaaa 187
>emb|CR387999.7| Opossum DNA sequence from clone XX-158F12, complete sequence Length = 169093 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 ccttcttcttgcctttgccagt 357 |||||||||||||||||||||| Sbjct: 17462 ccttcttcttgcctttgccagt 17441
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 44.1 bits (22), Expect = 0.55 Identities = 43/50 (86%) Strand = Plus / Minus Query: 371 gtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaa 420 |||||||||||| | |||||||| || ||||||||| | || |||||||| Sbjct: 981188 gtccacatctccttcacgttctccagcaccatgttggagtgccggtcaaa 981139
>gb|BC077664.1| Xenopus tropicalis MGC89748 protein, mRNA (cDNA clone MGC:89748 IMAGE:7027295), complete cds Length = 684 Score = 42.1 bits (21), Expect = 2.2 Identities = 54/65 (83%) Strand = Plus / Minus Query: 314 ctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtc 373 ||||| ||||||||||| || |||||| || || |||||| |||| || ||||||||| Sbjct: 353 ctgtctttgttcactggtttggacttcttttttcccttgccactcttagggacctcagtc 294 Query: 374 cacat 378 ||||| Sbjct: 293 cacat 289
>ref|XM_539112.2| PREDICTED: Canis familiaris similar to small nuclear ribonucleoprotein D2 (LOC481991), mRNA Length = 361 Score = 42.1 bits (21), Expect = 2.2 Identities = 75/93 (80%) Strand = Plus / Minus Query: 316 gtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtcca 375 ||||||||| ||||| || |||||||||||| |||| |||| || |||| ||||| Sbjct: 283 gtccttgttgactggcttggacttcttcttgcccttgctgctcttgggtaccttggtcca 224 Query: 376 catctccctaacgttctcgagaaccatgttgca 408 ||||||| | || ||||| || ||||||||||| Sbjct: 223 catctccttcacattctccagcaccatgttgca 191 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 457 gcagttgataagtacctgggtattgttcttgac 489 |||||| ||||| |||||||| ||||||||||| Sbjct: 145 gcagttaataagcacctgggtgttgttcttgac 113
>ref|NM_001005128.1| Xenopus tropicalis MGC89748 protein (MGC89748), mRNA Length = 684 Score = 42.1 bits (21), Expect = 2.2 Identities = 54/65 (83%) Strand = Plus / Minus Query: 314 ctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtc 373 ||||| ||||||||||| || |||||| || || |||||| |||| || ||||||||| Sbjct: 353 ctgtctttgttcactggtttggacttcttttttcccttgccactcttagggacctcagtc 294 Query: 374 cacat 378 ||||| Sbjct: 293 cacat 289
>emb|CR760591.2| Xenopus tropicalis finished cDNA, clone TEgg050o07 Length = 633 Score = 42.1 bits (21), Expect = 2.2 Identities = 54/65 (83%) Strand = Plus / Minus Query: 314 ctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtc 373 ||||| ||||||||||| || |||||| || || |||||| |||| || ||||||||| Sbjct: 297 ctgtctttgttcactggtttggacttcttttttcccttgccactcttagggacctcagtc 238 Query: 374 cacat 378 ||||| Sbjct: 237 cacat 233
>gb|AY750865.1| Toxoptera citricida putative small nuclear ribonucleoprotein D2-like protein mRNA, complete cds Length = 378 Score = 40.1 bits (20), Expect = 8.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 335 gccttcttcttgcctttgccagtctttggaacctcagtccacat 378 ||||| ||||||||||||||||| || || | ||||||||||| Sbjct: 263 gcctttttcttgcctttgccagttttaggtaattcagtccacat 220
>gb|AC102856.5| Mus musculus chromosome 8, clone RP24-500H8, complete sequence Length = 195286 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 tcatctgttaaacactcact 160 |||||||||||||||||||| Sbjct: 123970 tcatctgttaaacactcact 123989
>gb|AY222942.1| Schistosoma japonicum clone ZZD391 mRNA sequence Length = 1365 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 ccaagtagcttcttgttgtt 453 |||||||||||||||||||| Sbjct: 379 ccaagtagcttcttgttgtt 360
>emb|AL445524.28| Human DNA sequence from clone RP11-295G20 on chromosome 1 Contains the 5' end of the EGLN1 gene for egl nine homolog 1 (C. elegans), a small nuclear ribonucleoprotein D2 polypeptide 16.5kDa (SNRPD2) pseudogene, a novel gene, the 5' end of the TSNAX gene for translin-associated factor X and a CpG island, complete sequence Length = 154073 Score = 40.1 bits (20), Expect = 8.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 365 acctcagtccacatctccctaacgttctcgagaaccatgttgca 408 |||||||| ||||||||| | || ||||| || ||||||||||| Sbjct: 66856 acctcagtacacatctccttcacattctccagcaccatgttgca 66899
>emb|AL161716.14| Human DNA sequence from clone RP11-266E6 on chromosome 13 Contains the 3' end of a novel gene, a guanidinoacetate N-methyltransferase (GAMT) pseudogene and a CpG island, complete sequence Length = 164345 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 cttcttgcctttgccagtct 359 |||||||||||||||||||| Sbjct: 53462 cttcttgcctttgccagtct 53443
>ref|XM_963683.1| PREDICTED: Tribolium castaneum similar to CG1249-PA (LOC657212), mRNA Length = 357 Score = 40.1 bits (20), Expect = 8.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 443 ttcttgttgttccggcagttgataagtacctgggtattgttctt 486 ||||||||||| |||||||| || || ||||| || |||||||| Sbjct: 149 ttcttgttgtttcggcagtttatcagcacctgagtgttgttctt 106
>emb|CR381673.7| Zebrafish DNA sequence from clone CH211-209J3 in linkage group 2, complete sequence Length = 209097 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 aaacttaacagcgactgcat 202 |||||||||||||||||||| Sbjct: 203923 aaacttaacagcgactgcat 203942
>gb|BC014600.1| Homo sapiens cDNA clone MGC:26736 IMAGE:4826560, complete cds Length = 782 Score = 40.1 bits (20), Expect = 8.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 365 acctcagtccacatctccctaacgttctcgagaaccatgttgca 408 |||||||| ||||||||| | || ||||| || ||||||||||| Sbjct: 454 acctcagtacacatctccttcacattctccagcaccatgttgca 411
>gb|AC103877.2| Homo sapiens chromosome 8, clone CTD-2325A12, complete sequence Length = 97348 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 601 aaagggaaacaaaccaaatcagca 624 ||||||| |||||||||||||||| Sbjct: 13644 aaagggatacaaaccaaatcagca 13621
>gb|AC021242.10| Homo sapiens chromosome 8, clone RP11-375N15, complete sequence Length = 196152 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 601 aaagggaaacaaaccaaatcagca 624 ||||||| |||||||||||||||| Sbjct: 170491 aaagggatacaaaccaaatcagca 170468
>gb|AC013543.16| Homo sapiens chromosome 8, clone RP11-317H6, complete sequence Length = 177777 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 acactcactgttttagagca 171 |||||||||||||||||||| Sbjct: 23444 acactcactgttttagagca 23425
>gb|AC025133.6| Homo sapiens chromosome 8, clone RP11-227F6, complete sequence Length = 161644 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 acactcactgttttagagca 171 |||||||||||||||||||| Sbjct: 59708 acactcactgttttagagca 59727
>emb|BX855592.19| Zebrafish DNA sequence from clone CH211-232K3, complete sequence Length = 159646 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 ccacatctccctaacgttct 392 |||||||||||||||||||| Sbjct: 85598 ccacatctccctaacgttct 85617
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 ggccttcttcttgcctttgc 353 |||||||||||||||||||| Sbjct: 320640 ggccttcttcttgcctttgc 320621
>gb|AC079340.8| Homo sapiens BAC clone RP11-18H21 from 4, complete sequence Length = 186836 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 cattggcagctgcttcttcc 565 |||||||||||||||||||| Sbjct: 43694 cattggcagctgcttcttcc 43713
>gb|AF331671.1| Oryzias latipes ZPB gene, complete cds Length = 5609 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 gaacatcttgctgatgaacc 314 |||||||||||||||||||| Sbjct: 4724 gaacatcttgctgatgaacc 4705 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,692,639 Number of Sequences: 3902068 Number of extensions: 4692639 Number of successful extensions: 82985 Number of sequences better than 10.0: 146 Number of HSP's better than 10.0 without gapping: 146 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 82503 Number of HSP's gapped (non-prelim): 418 length of query: 628 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 605 effective length of database: 17,143,297,704 effective search space: 10371695110920 effective search space used: 10371695110920 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)