Clone Name | rbasd21i19 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | XAB1_HUMAN (Q9HCN4) XPA-binding protein 1 | 32 | 1.5 | 2 | LYG2_HUMAN (Q86SG7) Lysozyme g-like protein 2 precursor | 29 | 10.0 |
---|
>XAB1_HUMAN (Q9HCN4) XPA-binding protein 1| Length = 374 Score = 31.6 bits (70), Expect = 1.5 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -3 Query: 546 GVSAVSGTXVDAFFEAIEASANEYMETYRADLD 448 GVSAV GT +D F + ++A EY YR + + Sbjct: 242 GVSAVLGTGLDELFVQVTSAAEEYEREYRPEYE 274
>LYG2_HUMAN (Q86SG7) Lysozyme g-like protein 2 precursor| Length = 212 Score = 28.9 bits (63), Expect = 10.0 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = +1 Query: 319 GFVLQTSAEHHSLSFGLLHISPQSFH 396 G VLQ +H L FGL+ + Q++H Sbjct: 109 GSVLQDGWDHRGLKFGLMQLDKQTYH 134 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,978,698 Number of Sequences: 219361 Number of extensions: 1068061 Number of successful extensions: 2707 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2642 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2705 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4430660157 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)