>dbj|AB219969.1| Triticum aestivum WAP2 mRNA for aspartic proteinase, complete cds
          Length = 1560

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 42/44 (95%)
 Strand = Plus / Minus

                                                        
Query: 300  tcacagtgctctcgactcctcaagccgattctgcgaacccgatt 343
            ||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 1538 tcacagtgctctcgactcctcaagccgattccgcaaacccgatt 1495

>gb|AC008775.7| Homo sapiens chromosome 5 clone CTD-2019N2, complete sequence
          Length = 135503

 Score = 46.1 bits (23), Expect = 0.074
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 213    tttgtttcagcttttttacttat 235
              |||||||||||||||||||||||
Sbjct: 105467 tttgtttcagcttttttacttat 105489

>emb|BX323819.9| Zebrafish DNA sequence from clone CH211-132F19 in linkage group 17,
             complete sequence
          Length = 178951

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 185   tttaagaaagaaataaaaggt 205
             |||||||||||||||||||||
Sbjct: 91241 tttaagaaagaaataaaaggt 91261

>dbj|AP004943.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT38E13, TM0115,
             complete sequence
          Length = 95582

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 29    tttacaaatacaacaaacctt 49
             |||||||||||||||||||||
Sbjct: 27421 tttacaaatacaacaaacctt 27441

>gb|AC110520.12| Mus musculus chromosome 7, clone RP23-24N16, complete sequence
          Length = 248540

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                          
Query: 252    ggctcccatg-tctgaagatgcacaaac 278
              |||||||||| |||||||||||||||||
Sbjct: 226218 ggctcccatgatctgaagatgcacaaac 226191

>gb|AY541455.1| Helianthus annuus haplotype 5 acetohydroxyacid synthase 1 (AHAS1)
            gene, complete cds
          Length = 1959

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 29   tttacaaatacaacaaacct 48
            ||||||||||||||||||||
Sbjct: 1430 tttacaaatacaacaaacct 1449

>gb|AY541454.1| Helianthus annuus haplotype 4 acetohydroxyacid synthase 1 (AHAS1)
            gene, complete cds
          Length = 1959

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 29   tttacaaatacaacaaacct 48
            ||||||||||||||||||||
Sbjct: 1430 tttacaaatacaacaaacct 1449

>gb|AY541453.1| Helianthus annuus haplotype 3 acetohydroxyacid synthase 1 (AHAS1)
            gene, complete cds
          Length = 1977

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 29   tttacaaatacaacaaacct 48
            ||||||||||||||||||||
Sbjct: 1448 tttacaaatacaacaaacct 1467

>gb|AY541452.1| Helianthus annuus haplotype 2 acetohydroxyacid synthase 1 (AHAS1)
            gene, complete cds
          Length = 1965

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 29   tttacaaatacaacaaacct 48
            ||||||||||||||||||||
Sbjct: 1436 tttacaaatacaacaaacct 1455

>gb|AY541451.1| Helianthus annuus haplotype 1 acetohydroxyacid synthase 1 (AHAS1)
            gene, complete cds
          Length = 1968

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 29   tttacaaatacaacaaacct 48
            ||||||||||||||||||||
Sbjct: 1439 tttacaaatacaacaaacct 1458

>gb|BC071022.1| Xenopus laevis hypothetical protein LOC432090, mRNA (cDNA clone
            IMAGE:4030481), partial cds
          Length = 1955

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 52   tacaaaccatgtgttgcctatttg 75
            ||||||||||||||||||| ||||
Sbjct: 1337 tacaaaccatgtgttgcctttttg 1360

>gb|AC131335.11| Mus musculus chromosome 8, clone RP23-32D9, complete sequence
          Length = 190133

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    ttgcctatttgctctcactt 84
             ||||||||||||||||||||
Sbjct: 65004 ttgcctatttgctctcactt 65023

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 205     ttctctcttttgtttcagct 224
               ||||||||||||||||||||
Sbjct: 1632448 ttctctcttttgtttcagct 1632467

>gb|AC149637.11| Medicago truncatula clone mth2-181h2, complete sequence
          Length = 116616

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   cttttgtttcagctttttta 230
             ||||||||||||||||||||
Sbjct: 63445 cttttgtttcagctttttta 63426

>gb|AC150845.11| Medicago truncatula clone mth2-150a2, complete sequence
          Length = 131577

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 258    catgtctgaagatgcacaaa 277
              ||||||||||||||||||||
Sbjct: 104212 catgtctgaagatgcacaaa 104193

>emb|AL354873.19| Human DNA sequence from clone RP11-108K1 on chromosome 10 Contains a
              peptidylprolyl isomerase A (cyclophilin A) (PPIA)
              pseudogene, the 5' end of the ABLIM1 gene for actin binding
              LIM protein 1 and a CpG island, complete sequence
          Length = 187344

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 174    tttattcttggtttaagaaagaaa 197
              |||||||||||||||| |||||||
Sbjct: 138601 tttattcttggtttaaaaaagaaa 138578

>emb|AL078462.9|HSJ159G19 Human DNA sequence from clone RP1-159G19 on chromosome 6q14.1-14.3
             Contains the 3' part of a novel gene, complete sequence
          Length = 88509

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   ccattcttcattacacagca 121
             ||||||||||||||||||||
Sbjct: 75097 ccattcttcattacacagca 75078

>gb|AC160464.3| Mus musculus chromosome 7, clone RP23-256J14, complete sequence
          Length = 175716

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                          
Query: 252    ggctcccatg-tctgaagatgcacaaac 278
              |||||||||| |||||||||||||||||
Sbjct: 159000 ggctcccatgatctgaagatgcacaaac 159027

>gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1528D07,
             complete sequence
          Length = 87592

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 205   ttctctcttttgtttcagct 224
             ||||||||||||||||||||
Sbjct: 39894 ttctctcttttgtttcagct 39913

>gb|AC159821.2| Mus musculus BAC clone RP23-152A3 from chromosome 9, complete sequence
          Length = 221672

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 178    ttcttggtttaagaaagaaataaaaggt 205
              |||||| ||||||||| |||||||||||
Sbjct: 167984 ttcttgatttaagaaaaaaataaaaggt 167957

>emb|BX571678.14| Zebrafish DNA sequence from clone DKEY-271J15 in linkage group 16,
             complete sequence
          Length = 252671

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 211   cttttgtttcagctttttta 230
             ||||||||||||||||||||
Sbjct: 55958 cttttgtttcagctttttta 55977

>gb|AC154324.2| Mus musculus BAC clone RP24-494E12 from chromosome 14, complete
             sequence
          Length = 198197

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 185   tttaagaaagaaataaaagg 204
             ||||||||||||||||||||
Sbjct: 63294 tttaagaaagaaataaaagg 63275

>emb|BX321906.30| Zebrafish DNA sequence from clone DKEYP-45E9 in linkage group 10,
             complete sequence
          Length = 164266

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   ttaagaaagaaataaaaggt 205
             ||||||||||||||||||||
Sbjct: 93198 ttaagaaagaaataaaaggt 93179

>emb|BX324121.9| Zebrafish DNA sequence from clone DKEY-164J20 in linkage group 25,
              complete sequence
          Length = 181165

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 211    cttttgtttcagctttttta 230
              ||||||||||||||||||||
Sbjct: 128820 cttttgtttcagctttttta 128839

>gb|AC182231.2| Mus musculus BAC clone RP23-356C18 from chromosome 8, complete sequence
          Length = 206310

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 65     ttgcctatttgctctcactt 84
              ||||||||||||||||||||
Sbjct: 194642 ttgcctatttgctctcactt 194661

>gb|BC097578.1| Xenopus laevis hypothetical protein LOC432090, mRNA (cDNA clone
            MGC:114780 IMAGE:4031162), complete cds
          Length = 3093

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 52   tacaaaccatgtgttgcctatttg 75
            ||||||||||||||||||| ||||
Sbjct: 1331 tacaaaccatgtgttgcctttttg 1354

>gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1015F07,
              complete sequence
          Length = 127098

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 205    ttctctcttttgtttcagct 224
              ||||||||||||||||||||
Sbjct: 112009 ttctctcttttgtttcagct 112028

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 205     ttctctcttttgtttcagct 224
               ||||||||||||||||||||
Sbjct: 1632446 ttctctcttttgtttcagct 1632465

>emb|BX640592.10| Zebrafish DNA sequence from clone CH211-132E23 in linkage group 4,
              complete sequence
          Length = 186123

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 186    ttaagaaagaaataaaaggt 205
              ||||||||||||||||||||
Sbjct: 120269 ttaagaaagaaataaaaggt 120288

>gb|AC142168.3| Mus musculus BAC clone RP24-80B23 from chromosome 9, complete sequence
          Length = 173152

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 178   ttcttggtttaagaaagaaataaaaggt 205
             |||||| ||||||||| |||||||||||
Sbjct: 84307 ttcttgatttaagaaaaaaataaaaggt 84280

>dbj|AB013396.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTI20
          Length = 79676

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 206   tctctcttttgtttcagctttttt 229
             ||||||||||||||| ||||||||
Sbjct: 25012 tctctcttttgtttctgctttttt 25035

>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome
          Length = 1895994

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 210     tcttttgtttcagctttttt 229
               ||||||||||||||||||||
Sbjct: 1517033 tcttttgtttcagctttttt 1517052

>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome
          Length = 1892819

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 210    tcttttgtttcagctttttt 229
              ||||||||||||||||||||
Sbjct: 493026 tcttttgtttcagctttttt 493007

>emb|AL953857.7| Zebrafish DNA sequence from clone CH211-127M7, complete sequence
          Length = 175586

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 211    cttttgtttcagctttttta 230
              ||||||||||||||||||||
Sbjct: 166753 cttttgtttcagctttttta 166772

>gb|AC004558.1|AC004558 Homo sapiens chromosome 19, overlapping cosmids F20014 and F8998,
             complete sequence
          Length = 82453

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 64    gttgcctatttgctctcacttctc 87
             ||||| ||||||||||||||||||
Sbjct: 15139 gttgcttatttgctctcacttctc 15162

>gb|AY871911.1| Synthetic construct hypothetical protein (FTT0475) gene, complete
           cds
          Length = 1224

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 210 tcttttgtttcagctttttt 229
           ||||||||||||||||||||
Sbjct: 467 tcttttgtttcagctttttt 448

>emb|AL671893.7| Mouse DNA sequence from clone RP23-170G19 on chromosome X, complete
              sequence
          Length = 175057

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 202    aggttctctcttttgtttca 221
              ||||||||||||||||||||
Sbjct: 155234 aggttctctcttttgtttca 155253

>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
             clone:P0043E01
          Length = 154128

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 205   ttctctcttttgtttcagct 224
             ||||||||||||||||||||
Sbjct: 44911 ttctctcttttgtttcagct 44930


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,954,957
Number of Sequences: 3902068
Number of extensions: 3954957
Number of successful extensions: 96252
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 96111
Number of HSP's gapped (non-prelim): 143
length of query: 343
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 321
effective length of database: 17,147,199,772
effective search space: 5504251126812
effective search space used: 5504251126812
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)