>RBBP5_HUMAN (Q15291) Retinoblastoma-binding protein 5 (RBBP-5)|
           (Retinoblastoma-binding protein RBQ-3)
          Length = 538

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +2

Query: 32  KTAALNLNLLPTEELITILNAKGNGDGKRKVHKRPKG 142
           KT  + L  +P +E+  +L  KG+G  K+K   RPKG
Sbjct: 453 KTTNIELQGVPNDEVHPLLGVKGDGKSKKKQAGRPKG 489

>ATX2L_MOUSE (Q7TQH0) Ataxin-2-like protein|
          Length = 1049

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +2

Query: 86  LNAKGNGDGKRKVHKRPKGGGTNVRNYVLH*ASIHGW 196
           +N+K NG+ K KV +R +GG +N  +Y L     +GW
Sbjct: 213 MNSKVNGEHKEKVLQRWEGGDSNSDDYDLESDMSNGW 249

>ATX2L_HUMAN (Q8WWM7) Ataxin-2-like protein (Ataxin-2 domain protein)|
           (Ataxin-2-related protein)
          Length = 1075

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +2

Query: 86  LNAKGNGDGKRKVHKRPKGGGTNVRNYVLH*ASIHGW 196
           +N+K NG+ K KV +R +GG +N  +Y L     +GW
Sbjct: 215 MNSKVNGEHKEKVLQRWEGGDSNSDDYDLESDMSNGW 251

>CRCB2_LACPL (Q88ZT7) Protein crcB homolog 2|
          Length = 127

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = -3

Query: 210 GHALCQPWMEA*WST*FLTLVPPPLGLLCTFLLPSPFPFAFNIVINSSVG 61
           G +L   W +  W T  + +V   +  L T LLP+  P + +IVI  SVG
Sbjct: 20  GLSLLVTWPQHFWITCLINIVGAFVLSLITNLLPARLPVSEDIVIGMSVG 69

>HELX_METJA (Q57742) Putative ATP-dependent helicase MJ0294 (EC 3.6.1.-)|
          Length = 841

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 11/16 (68%), Positives = 15/16 (93%)
 Frame = -3

Query: 114 LPSPFPFAFNIVINSS 67
           LPSP PFAFN+V+++S
Sbjct: 796 LPSPSPFAFNLVVSAS 811

>DHR11_BOVIN (Q3ZBV9) Dehydrogenase/reductase SDR family member 11 precursor (EC|
           1.-.-.-)
          Length = 255

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = -1

Query: 425 ICCCQAC*SEREQLKLDSAVVEI*SMCFLIRKLGA*RHPVPPP 297
           IC  +AC S RE+   D  ++ I SMC          H VPPP
Sbjct: 122 ICTREACQSMRERKVDDGHIININSMC---------GHRVPPP 155

>CF23_DROME (Q01522) Chorion transcription factor Cf2, isoform III|
          Length = 514

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 240 LTRRIPGRQSSSPASSYIFWRW 305
           +TR  P R SSS +SS  FW W
Sbjct: 460 VTRSCPSRSSSSYSSSKSFWSW 481


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,368,783
Number of Sequences: 219361
Number of extensions: 1481487
Number of successful extensions: 3316
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3316
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)