>DHSA_MACFA (Q8HXW3) Succinate dehydrogenase [ubiquinone] flavoprotein subunit,|
           mitochondrial precursor (EC 1.3.5.1) (Fp) (Flavoprotein
           subunit of complex II)
          Length = 664

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = -2

Query: 358 KTTLDHYYYEKRIKEEHKKLTEKHQRDFVASYKKATTESASKREREHQHFTERVMKEA 185
           K  +D Y Y K I+ + KK  E+H R    SY   +T    K   E++   ++ + EA
Sbjct: 598 KARIDEYDYSKPIQGQQKKPFEEHWRKHTLSYVDVST---GKVTLEYRPVIDKTLNEA 652

>DHSA_HUMAN (P31040) Succinate dehydrogenase [ubiquinone] flavoprotein subunit,|
           mitochondrial precursor (EC 1.3.5.1) (Fp) (Flavoprotein
           subunit of complex II)
          Length = 664

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 18/58 (31%), Positives = 27/58 (46%)
 Frame = -2

Query: 358 KTTLDHYYYEKRIKEEHKKLTEKHQRDFVASYKKATTESASKREREHQHFTERVMKEA 185
           K  +D Y Y K I+ + KK  E+H R    SY    T    K   E++   ++ + EA
Sbjct: 598 KVRIDEYDYSKPIQGQQKKPFEEHWRKHTLSYVDVGT---GKVTLEYRPVIDKTLNEA 652

>ZNF31_HUMAN (P17040) Zinc finger protein 31 (Zinc finger protein KOX29) (Zinc|
           finger and SCAN domain-containing protein 20) (Zinc
           finger protein 360)
          Length = 977

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
 Frame = -2

Query: 535 PGMATSQPNKAT---MEWGEDKDAVGEDQGLW 449
           PG  +  P +A    ++WGED +   ED+G W
Sbjct: 580 PGALSKCPTEAVCQPLDWGEDSENENEDEGQW 611

>PRP28_CRYNE (Q5KNF8) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC|
           3.6.1.-)
          Length = 738

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -2

Query: 538 RPGMATSQPNKATMEWGEDKDAVGEDQGLWERVAKKL 428
           +P +  +Q  K   +W E  D    DQ  W R  ++L
Sbjct: 199 KPRLRKAQDKKIIFDWNEQDDTSAADQSSWTREVREL 235


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,766,582
Number of Sequences: 219361
Number of extensions: 733359
Number of successful extensions: 2806
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2804
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)