ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd21i12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC069235.23|AC069235 Homo sapiens 12 BAC RP11-173C20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 90500 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 383 atcctcttccttcttcctctcc 404 |||||||||||||||||||||| Sbjct: 1112 atcctcttccttcttcctctcc 1091
>emb|AL121656.2|CNS01DS6 BAC sequence from the SPG4 candidate region at 2p21-2p22 BAC 367K01 of library CITB_978_SKB from chromosome 2 of Homo sapiens (Human) Length = 179206 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 365 cttcatctttgcttccctatcctcttccttcttc 398 ||||||||| ||||| ||||||||||||||||| Sbjct: 136999 cttcatcttctcttccttatcctcttccttcttc 137032
>gb|AC161505.4| Mus musculus chromosome 8, clone RP24-307K17, complete sequence Length = 215514 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 tcctcttccttcttcctctcc 404 ||||||||||||||||||||| Sbjct: 63430 tcctcttccttcttcctctcc 63450
>gb|AC124624.13| Mus musculus chromosome 5, clone RP23-417K9, complete sequence Length = 192261 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 556 tacaggtctgccaagtgcttcctga 580 ||||| ||||||||||||||||||| Sbjct: 73104 tacagctctgccaagtgcttcctga 73080
>gb|AC127677.4| Mus musculus BAC clone RP24-226C2 from chromosome 8, complete sequence Length = 167913 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 tcctcttccttcttcctctcc 404 ||||||||||||||||||||| Sbjct: 127305 tcctcttccttcttcctctcc 127325
>emb|Z84497.1|HSO14 Human DNA sequence from clone XX-O14 on chromosome 6 Contains the BRD2 gene for bromodomain-containing protein 2 (RING3, KIAA9001), ESTs, STSs, GSSs and two CpG islands, complete sequence Length = 40740 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 365 cttcatctttgcttccctatcctcttccttctt 397 |||||||||| ||||||| | |||||||||||| Sbjct: 2463 cttcatctttacttccctctactcttccttctt 2495
>emb|BX005422.5| Human DNA sequence from clone DASS-32K24 on chromosome 6, complete sequence Length = 97466 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 365 cttcatctttgcttccctatcctcttccttctt 397 |||||||||| ||||||| | |||||||||||| Sbjct: 28546 cttcatctttacttccctctactcttccttctt 28514
>emb|AL805913.4| Human DNA sequence from clone DAQB-22D21 on chromosome 6 Contains the 3' end of the BRD2 gene for bromodomain containing 2, the HLA-DOA gene for the major histocompatibility complex, class II, DO alpha, the HLA-DPA1 gene for the major histocompatibility complex, class II, DP alpha 1, the RPL32P1 pseudogene for ribosomal protein L32 pseudogene 1, the 3' end of the HLA-DPB1 gene for the major histocompatibility complex, class II, DP beta 1 and 1 CpG isalnd, complete sequence Length = 106728 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 365 cttcatctttgcttccctatcctcttccttctt 397 |||||||||| ||||||| | |||||||||||| Sbjct: 25515 cttcatctttacttccctctactcttccttctt 25483
>emb|AL645931.7| Human DNA sequence from clone XXbac-138A21 on chromosome 6 Contains the HLA-DOA, HLA-DPA1 and HLA-DPB1 genes for major histocompatibility complex class II proteins DO alpha, DP alpha 1 and DP beta 1, the HLA-DPA2 major histocompatibility complex class II DP alpha 2 pseudogene, ribosomal protein L32 pseudogene RPL32P1, a pseudogene similar to part of collagens, the 5' end of an HLA class II histocompatibility antigen D or S beta pseudogene, the 5' end of a novel protein similar to major histocompatibility complex class II DP beta 1 precursor and a CpG island, complete sequence Length = 124899 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 365 cttcatctttgcttccctatcctcttccttctt 397 |||||||||| ||||||| | |||||||||||| Sbjct: 8554 cttcatctttacttccctctactcttccttctt 8522
>emb|AL662845.5| Human DNA sequence from clone XXbac-136A3 on chromosome 6 contains the HLA-DMB gene for major histocompatibility complex, class II, DM beta, the HLA-DMA gene for major histocompatibility complex, class II, DM alpha, the BRD2 gene for bromodomain containing 2, the HLA-DOA gene for major histocompatibility complex, class II, DO alpha and two CpG islands, complete sequence Length = 97128 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 365 cttcatctttgcttccctatcctcttccttctt 397 |||||||||| ||||||| | |||||||||||| Sbjct: 78027 cttcatctttacttccctctactcttccttctt 77995
>emb|CR936909.2| Human DNA sequence from clone DAMA-214M2 on chromosome 6, complete sequence Length = 40809 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 365 cttcatctttgcttccctatcctcttccttctt 397 |||||||||| ||||||| | |||||||||||| Sbjct: 24740 cttcatctttacttccctctactcttccttctt 24708
>emb|CR759795.4| Human DNA sequence from clone DAMC-206D4 on chromosome 6, complete sequence Length = 119898 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 365 cttcatctttgcttccctatcctcttccttctt 397 |||||||||| ||||||| | |||||||||||| Sbjct: 2984 cttcatctttacttccctctactcttccttctt 2952
>emb|CR759829.6| Human DNA sequence from clone DADB-17J1 on chromosome 6, complete sequence Length = 93292 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 365 cttcatctttgcttccctatcctcttccttctt 397 |||||||||| ||||||| | |||||||||||| Sbjct: 22781 cttcatctttacttccctctactcttccttctt 22749
>gb|AC161237.8| Mus musculus chromosome 3, clone RP23-307M9, complete sequence Length = 206004 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 tcctcttccttcttcctctcc 404 ||||||||||||||||||||| Sbjct: 134572 tcctcttccttcttcctctcc 134552
>emb|AL670884.7| Mouse DNA sequence from clone RP23-372M15 on chromosome 4, complete sequence Length = 143363 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 378 tccctatcctcttccttcttcctct 402 |||||||||||| |||||||||||| Sbjct: 125414 tccctatcctctcccttcttcctct 125438
>emb|AL844604.4| Mouse DNA sequence from clone RP24-318C20 on chromosome 4, complete sequence Length = 173133 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 378 tccctatcctcttccttcttcctct 402 |||||||||||| |||||||||||| Sbjct: 4239 tccctatcctctcccttcttcctct 4263
>gb|AC093350.15| Mus musculus chromosome 3, clone RP23-16G3, complete sequence Length = 200326 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 tggacaaggttcaacaacaca 56 ||||||||||||||||||||| Sbjct: 3824 tggacaaggttcaacaacaca 3804
>gb|AC125099.3| Mus musculus BAC clone RP24-201C14 from 3, complete sequence Length = 166720 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 tggacaaggttcaacaacaca 56 ||||||||||||||||||||| Sbjct: 96865 tggacaaggttcaacaacaca 96885
>gb|AC171197.1| Mus musculus BAC clone RP23-216J7 from chromosome 5, complete sequence Length = 211677 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 556 tacaggtctgccaagtgcttcctga 580 ||||| ||||||||||||||||||| Sbjct: 165309 tacagctctgccaagtgcttcctga 165285
>gb|AC161414.3| Mus musculus chromosome 1, clone CH36-500J15, complete sequence Length = 165234 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 tcctcttccttcttcctctcc 404 ||||||||||||||||||||| Sbjct: 164782 tcctcttccttcttcctctcc 164762
>ref|NM_200094.1| Danio rerio splicing factor 3a, subunit 1 (sf3a1), mRNA Length = 2769 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 tcctcttccttcttcctctc 403 |||||||||||||||||||| Sbjct: 804 tcctcttccttcttcctctc 785
>ref|NM_106085.1| Arabidopsis thaliana heat shock protein binding / nucleic acid binding / unfolded protein binding / zinc ion binding AT1G74250 mRNA, complete cds Length = 1893 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 377 ttccctatcctcttccttcttcctctcc 404 |||||| ||||||||||||||| ||||| Sbjct: 771 ttccctctcctcttccttcttcttctcc 744
>gb|AC102914.9| Mus musculus chromosome 15, clone RP24-274M4, complete sequence Length = 185807 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 cctcttccttcttcctctcc 404 |||||||||||||||||||| Sbjct: 179069 cctcttccttcttcctctcc 179050
>gb|AC162176.2| Mus musculus BAC clone RP24-446P15 from chromosome 9, complete sequence Length = 204098 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 gcatgatgaatagaagaagc 98 |||||||||||||||||||| Sbjct: 95548 gcatgatgaatagaagaagc 95567
>gb|AC161194.14| Mus musculus chromosome 15, clone RP23-345C13, complete sequence Length = 193998 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 cctcttccttcttcctctcc 404 |||||||||||||||||||| Sbjct: 17596 cctcttccttcttcctctcc 17577
>gb|AC166051.5| Mus musculus BAC clone RP24-166B2 from chromosome 9, complete sequence Length = 152610 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 gcatgatgaatagaagaagc 98 |||||||||||||||||||| Sbjct: 129110 gcatgatgaatagaagaagc 129129
>ref|XM_519231.1| PREDICTED: Pan troglodytes similar to 28 kDa heat- and acid-stable phosphoprotein (PDGF-associated protein) (PAP) (PDGFA-associated protein 1) (PAP1) (LOC463569), mRNA Length = 975 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 372 tttgcttccctatcctcttccttcttcc 399 ||||||| ||| |||||||||||||||| Sbjct: 698 tttgctttcctttcctcttccttcttcc 671
>gb|AC138320.12| Mus musculus chromosome 5, clone RP23-181I1, complete sequence Length = 230584 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 376 cttccctatcctcttccttcttcctctc 403 ||||||| ||||| |||||||||||||| Sbjct: 84181 cttccctctcctcctccttcttcctctc 84154
>gb|BC056521.1| Danio rerio splicing factor 3a, subunit 1, mRNA (cDNA clone MGC:65786 IMAGE:6790606), complete cds Length = 2769 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 tcctcttccttcttcctctc 403 |||||||||||||||||||| Sbjct: 804 tcctcttccttcttcctctc 785
>gb|BC000684.2| Homo sapiens PDGFA associated protein 1, mRNA (cDNA clone MGC:789 IMAGE:3347335), complete cds Length = 1305 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 372 tttgcttccctatcctcttccttcttcc 399 ||||||| ||| |||||||||||||||| Sbjct: 537 tttgctttcctttcctcttccttcttcc 510
>gb|BC007873.2| Homo sapiens PDGFA associated protein 1, mRNA (cDNA clone MGC:14445 IMAGE:4303959), complete cds Length = 1269 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 372 tttgcttccctatcctcttccttcttcc 399 ||||||| ||| |||||||||||||||| Sbjct: 501 tttgctttcctttcctcttccttcttcc 474
>gb|BC071993.1| Homo sapiens PDGFA associated protein 1, mRNA (cDNA clone IMAGE:6421888), partial cds Length = 1304 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 372 tttgcttccctatcctcttccttcttcc 399 ||||||| ||| |||||||||||||||| Sbjct: 535 tttgctttcctttcctcttccttcttcc 508
>gb|AC122006.3| Mus musculus BAC clone RP24-344B12 from chromosome 16, complete sequence Length = 156395 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 tcctcttccttcttcctctc 403 |||||||||||||||||||| Sbjct: 87669 tcctcttccttcttcctctc 87650
>gb|BC066392.1| Danio rerio splicing factor 3a, subunit 1, mRNA (cDNA clone MGC:77239 IMAGE:6963267), complete cds Length = 2782 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 tcctcttccttcttcctctc 403 |||||||||||||||||||| Sbjct: 811 tcctcttccttcttcctctc 792
>ref|NM_014891.5| Homo sapiens PDGFA associated protein 1 (PDAP1), mRNA Length = 2383 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 372 tttgcttccctatcctcttccttcttcc 399 ||||||| ||| |||||||||||||||| Sbjct: 612 tttgctttcctttcctcttccttcttcc 585
>gb|AC153010.3| Mus musculus BAC clone RP23-325H1 from chromosome 15, complete sequence Length = 230097 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 cctcttccttcttcctctcc 404 |||||||||||||||||||| Sbjct: 175838 cctcttccttcttcctctcc 175819
>gb|AC091276.7| Mus musculus chromosome 15, clone RP23-167B4, complete sequence Length = 255663 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 cctcttccttcttcctctcc 404 |||||||||||||||||||| Sbjct: 148612 cctcttccttcttcctctcc 148593
>gb|AC155946.7| Mus musculus 6 BAC RP24-483K3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 178502 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 cttccctatcctcttccttc 395 |||||||||||||||||||| Sbjct: 105904 cttccctatcctcttccttc 105885
>ref|XM_860794.1| PREDICTED: Canis familiaris similar to splicing factor 3a, subunit 1, 120kDa isoform 2, transcript variant 6 (LOC477538), mRNA Length = 2867 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 tcctcttccttcttcctctc 403 |||||||||||||||||||| Sbjct: 854 tcctcttccttcttcctctc 835
>ref|XM_860778.1| PREDICTED: Canis familiaris similar to splicing factor 3a, subunit 1, 120kDa isoform 2, transcript variant 5 (LOC477538), mRNA Length = 2840 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 tcctcttccttcttcctctc 403 |||||||||||||||||||| Sbjct: 827 tcctcttccttcttcctctc 808
>ref|XM_847423.1| PREDICTED: Canis familiaris similar to splicing factor 3a, subunit 1, 120kDa isoform 2, transcript variant 2 (LOC477538), mRNA Length = 2843 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 tcctcttccttcttcctctc 403 |||||||||||||||||||| Sbjct: 830 tcctcttccttcttcctctc 811
>ref|XM_860750.1| PREDICTED: Canis familiaris similar to splicing factor 3a, subunit 1, 120kDa isoform 2, transcript variant 4 (LOC477538), mRNA Length = 2840 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 tcctcttccttcttcctctc 403 |||||||||||||||||||| Sbjct: 827 tcctcttccttcttcctctc 808
>ref|XM_860739.1| PREDICTED: Canis familiaris similar to splicing factor 3a, subunit 1, 120kDa isoform 2, transcript variant 3 (LOC477538), mRNA Length = 2702 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 tcctcttccttcttcctctc 403 |||||||||||||||||||| Sbjct: 689 tcctcttccttcttcctctc 670
>ref|XM_534733.2| PREDICTED: Canis familiaris similar to splicing factor 3a, subunit 1, 120kDa isoform 2, transcript variant 1 (LOC477538), mRNA Length = 2921 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 tcctcttccttcttcctctc 403 |||||||||||||||||||| Sbjct: 908 tcctcttccttcttcctctc 889
>gb|AC142474.4| Mus musculus BAC clone RP24-362N7 from chromosome 15, complete sequence Length = 172879 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 cctcttccttcttcctctcc 404 |||||||||||||||||||| Sbjct: 45170 cctcttccttcttcctctcc 45151
>ref|XM_801219.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511305.20) partial mRNA Length = 3462 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 310 gctcctccttaatccgcttctcat 333 |||||||| ||||||||||||||| Sbjct: 889 gctcctccataatccgcttctcat 866
>gb|AC132459.3| Mus musculus BAC clone RP23-152I2 from chromosome 14, complete sequence Length = 186486 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 379 ccctatcctcttccttcttcctct 402 |||| ||||||||||||||||||| Sbjct: 184975 ccctttcctcttccttcttcctct 184952
>gb|AC125085.4| Mus musculus BAC clone RP24-135G18 from chromosome 8, complete sequence Length = 168721 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 cctcttccttcttcctctcc 404 |||||||||||||||||||| Sbjct: 145643 cctcttccttcttcctctcc 145662
>gb|AC114005.5| Mus musculus BAC clone RP23-179L18 from 8, complete sequence Length = 214732 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 cctcttccttcttcctctcc 404 |||||||||||||||||||| Sbjct: 177286 cctcttccttcttcctctcc 177267
>gb|AC136628.2| Homo sapiens chromosome 5 clone RP11-798K23, complete sequence Length = 137132 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 ccctctcccacaacccctgg 461 |||||||||||||||||||| Sbjct: 44167 ccctctcccacaacccctgg 44186
>gb|AC144608.10| Medicago truncatula clone mth2-23d2, complete sequence Length = 112000 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 356 tttcagctccttcatctttgcttc 379 ||||||||||| |||||||||||| Sbjct: 79437 tttcagctcctgcatctttgcttc 79414
>gb|AC146560.21| Medicago truncatula clone mth2-12g6, complete sequence Length = 127820 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 tcctcttccttcttcctctc 403 |||||||||||||||||||| Sbjct: 63624 tcctcttccttcttcctctc 63605
>emb|AL163285.2|HS21C085 Homo sapiens chromosome 21 segment HS21C085 Length = 340000 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 cctcttccttcttcctctcc 404 |||||||||||||||||||| Sbjct: 103600 cctcttccttcttcctctcc 103581
>gb|AC102633.7| Mus musculus chromosome 15, clone RP23-326O18, complete sequence Length = 225738 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 cctcttccttcttcctctcc 404 |||||||||||||||||||| Sbjct: 17482 cctcttccttcttcctctcc 17463
>emb|AL391216.10| Human DNA sequence from clone RP11-241C9 on chromosome 1 Contains the 5' end of the ESSRG gene for estrogen-related receptor gamma and two CpG islands, complete sequence Length = 101542 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tctttgatgcactctctgtg 251 |||||||||||||||||||| Sbjct: 21204 tctttgatgcactctctgtg 21185
>gb|AY337337.1| Tribolium castaneum strain GA-1 cytochrome P450 monooxygenase gene cluster, complete sequence Length = 11784 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 cttctcatagtagtagtggt 345 |||||||||||||||||||| Sbjct: 8911 cttctcatagtagtagtggt 8892
>gb|AY116176.1| Borderea chouardii clone Bc1274 microsatellite sequence Length = 435 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 atcctcttccttcttcctct 402 |||||||||||||||||||| Sbjct: 3 atcctcttccttcttcctct 22
>emb|AL139079.2|CJ11168X6 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment 6/6 Length = 155932 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 atttttgaagcctctttcatcacc 200 |||||| ||||||||||||||||| Sbjct: 144774 atttttaaagcctctttcatcacc 144797
>gb|BT007663.1| Synthetic construct Homo sapiens PDGFA associated protein 1 mRNA, partial cds Length = 546 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 372 tttgcttccctatcctcttccttcttcc 399 ||||||| ||| |||||||||||||||| Sbjct: 491 tttgctttcctttcctcttccttcttcc 464
>emb|AL954240.1| Pan troglodytes chromosome 22 clone PTB-045O21 map 22q22.2-q22.3, complete sequence Length = 164591 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 cctcttccttcttcctctcc 404 |||||||||||||||||||| Sbjct: 46200 cctcttccttcttcctctcc 46181
>emb|AL954239.1| Pan troglodytes chromosome 22 clone PTB-028I09 map 22q22.2-q22.3, complete sequence Length = 141737 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 cctcttccttcttcctctcc 404 |||||||||||||||||||| Sbjct: 127146 cctcttccttcttcctctcc 127127
>emb|CR623254.1| full-length cDNA clone CS0DI002YG11 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 983 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 372 tttgcttccctatcctcttccttcttcc 399 ||||||| ||| |||||||||||||||| Sbjct: 231 tttgctttcctttcctcttccttcttcc 204
>emb|CR623070.1| full-length cDNA clone CS0DD009YG01 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1212 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 372 tttgcttccctatcctcttccttcttcc 399 ||||||| ||| |||||||||||||||| Sbjct: 506 tttgctttcctttcctcttccttcttcc 479
>emb|CR609076.1| full-length cDNA clone CS0DG004YB07 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1022 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 372 tttgcttccctatcctcttccttcttcc 399 ||||||| ||| |||||||||||||||| Sbjct: 480 tttgctttcctttcctcttccttcttcc 453
>emb|CR609056.1| full-length cDNA clone CS0DI024YA10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1203 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 372 tttgcttccctatcctcttccttcttcc 399 ||||||| ||| |||||||||||||||| Sbjct: 483 tttgctttcctttcctcttccttcttcc 456
>emb|CR606062.1| full-length cDNA clone CS0DI007YC19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1266 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 372 tttgcttccctatcctcttccttcttcc 399 ||||||| ||| |||||||||||||||| Sbjct: 549 tttgctttcctttcctcttccttcttcc 522
>emb|CR594369.1| full-length cDNA clone CS0DI076YH10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1236 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 372 tttgcttccctatcctcttccttcttcc 399 ||||||| ||| |||||||||||||||| Sbjct: 518 tttgctttcctttcctcttccttcttcc 491
>gb|AC083913.2| Genomic sequence for Mus musculus, clone RP23-376A14, complete sequence Length = 218940 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 cctcttccttcttcctctcc 404 |||||||||||||||||||| Sbjct: 97373 cctcttccttcttcctctcc 97354
>gb|AC084880.12| Homo sapiens 12 BAC RP11-64B16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 110001 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 372 tttgcttccctatcctcttccttcttcc 399 ||||||| ||| |||||||||||||||| Sbjct: 26870 tttgctttcctttcctcttccttcttcc 26843
>gb|AC154287.2| Mus musculus BAC clone RP24-484I9 from chromosome 14, complete sequence Length = 165637 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 379 ccctatcctcttccttcttcctct 402 |||| ||||||||||||||||||| Sbjct: 77646 ccctttcctcttccttcttcctct 77623
>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold Length = 2136267 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 cctcctctctcaacttcttt 437 |||||||||||||||||||| Sbjct: 1339972 cctcctctctcaacttcttt 1339991
>gb|AF326598.2| Spodoptera litura nucleopolyhedrovirus ubiquitin gene cluster, complete sequence Length = 993 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ttatagtaacaaagacgcgc 32 |||||||||||||||||||| Sbjct: 961 ttatagtaacaaagacgcgc 980
>gb|AC156796.2| Mus musculus BAC clone RP24-90N20 from chromosome 9, complete sequence Length = 204185 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 cctcttccttcttcctctcc 404 |||||||||||||||||||| Sbjct: 129197 cctcttccttcttcctctcc 129216
>dbj|AK079559.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230073I18 product:unclassifiable, full insert sequence Length = 674 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 tcctcttccttcttcctctc 403 |||||||||||||||||||| Sbjct: 617 tcctcttccttcttcctctc 636
>gb|DQ000554.1| Synthetic construct clone PSF:109061 unknown gene Length = 618 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 372 tttgcttccctatcctcttccttcttcc 399 ||||||| ||| |||||||||||||||| Sbjct: 563 tttgctttcctttcctcttccttcttcc 536
>gb|AC158651.12| Mus musculus BAC RP24-68I7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 190089 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 cttccctatcctcttccttc 395 |||||||||||||||||||| Sbjct: 6826 cttccctatcctcttccttc 6807
>gb|AC074224.3|AC074224 Mus musculus strain C57BL6/J chromosome 2 clone RP23-43C3, complete sequence Length = 188989 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 tcctcttccttcttcctctc 403 |||||||||||||||||||| Sbjct: 117498 tcctcttccttcttcctctc 117479
>gb|AC020579.5|AC020579 Arabidopsis thaliana chromosome 1 BAC F1O17 genomic sequence, complete sequence Length = 50821 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 377 ttccctatcctcttccttcttcctctcc 404 |||||| ||||||||||||||| ||||| Sbjct: 31857 ttccctctcctcttccttcttcttctcc 31884
>gb|AC124287.10| Homo sapiens chromosome 17, clone RP13-991F5, complete sequence Length = 162180 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 tcctcctctctcaacttctt 436 |||||||||||||||||||| Sbjct: 117501 tcctcctctctcaacttctt 117520
>gb|AC150469.3| Atelerix albiventris clone LB4-498C22, complete sequence Length = 56862 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 cctcctctctcaacttcttt 437 |||||||||||||||||||| Sbjct: 27547 cctcctctctcaacttcttt 27566
>gb|AC113425.2| Homo sapiens chromosome 5 clone RP11-626B22, complete sequence Length = 180571 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 ccctctcccacaacccctgg 461 |||||||||||||||||||| Sbjct: 50219 ccctctcccacaacccctgg 50238
>gb|BC049511.1| Danio rerio splicing factor 3a, subunit 1, mRNA (cDNA clone IMAGE:5915856) Length = 1897 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 tcctcttccttcttcctctc 403 |||||||||||||||||||| Sbjct: 794 tcctcttccttcttcctctc 775
>gb|AY892434.1| Synthetic construct Homo sapiens clone FLH026077.01L PDGFA associated protein 1 (PDAP1) mRNA, partial cds Length = 546 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 372 tttgcttccctatcctcttccttcttcc 399 ||||||| ||| |||||||||||||||| Sbjct: 491 tttgctttcctttcctcttccttcttcc 464
>gb|AY892433.1| Synthetic construct Homo sapiens clone FLH026076.01L PDGFA associated protein 1 (PDAP1) mRNA, partial cds Length = 546 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 372 tttgcttccctatcctcttccttcttcc 399 ||||||| ||| |||||||||||||||| Sbjct: 491 tttgctttcctttcctcttccttcttcc 464
>emb|AL591213.4| Zebrafish DNA sequence from clone BUSM1-150F13, complete sequence Length = 113551 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 tcctcttccttcttcctctc 403 |||||||||||||||||||| Sbjct: 18808 tcctcttccttcttcctctc 18789
>gb|AF091847.1|AF091847 Mus musculus otoconin-90 (Oc90) gene, partial cds Length = 8142 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 cctcttccttcttcctctcc 404 |||||||||||||||||||| Sbjct: 2891 cctcttccttcttcctctcc 2910
>emb|AL929209.17| Mouse DNA sequence from clone RP23-415C3 on chromosome 2, complete sequence Length = 210790 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 tcctcttccttcttcctctc 403 |||||||||||||||||||| Sbjct: 83730 tcctcttccttcttcctctc 83749
>dbj|D00509.1|BTVS9VP6 Bluetongue virus gene for VP6, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 ttgcgtcctcctctctcaac 431 |||||||||||||||||||| Sbjct: 641 ttgcgtcctcctctctcaac 622
>emb|AL928590.10| Mouse DNA sequence from clone RP23-26A12 on chromosome 2, complete sequence Length = 171007 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 tcctcttccttcttcctctc 403 |||||||||||||||||||| Sbjct: 131172 tcctcttccttcttcctctc 131191
>gb|U55801.1|BVU55801 Bluetongue virus strain BTV 10 VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 ttgcgtcctcctctctcaac 431 |||||||||||||||||||| Sbjct: 641 ttgcgtcctcctctctcaac 622
>gb|U55800.1|BVU55800 Bluetongue virus vaccine strain VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 ttgcgtcctcctctctcaac 431 |||||||||||||||||||| Sbjct: 641 ttgcgtcctcctctctcaac 622
>gb|U55797.1|BVU55797 Bluetongue virus strain BTV 13 VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 ttgcgtcctcctctctcaac 431 |||||||||||||||||||| Sbjct: 641 ttgcgtcctcctctctcaac 622
>gb|U55795.1|BVU55795 Bluetongue virus strain 17O90X VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 ttgcgtcctcctctctcaac 431 |||||||||||||||||||| Sbjct: 641 ttgcgtcctcctctctcaac 622
>gb|U55794.1|BVU55794 Bluetongue virus strain 17O81Y VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 ttgcgtcctcctctctcaac 431 |||||||||||||||||||| Sbjct: 641 ttgcgtcctcctctctcaac 622
>gb|U55793.1|BVU55793 Bluetongue virus strain 17C81W VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 ttgcgtcctcctctctcaac 431 |||||||||||||||||||| Sbjct: 641 ttgcgtcctcctctctcaac 622
>gb|U55792.1|BVU55792 Bluetongue virus strain 17B90Z VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 ttgcgtcctcctctctcaac 431 |||||||||||||||||||| Sbjct: 641 ttgcgtcctcctctctcaac 622
>gb|U55791.1|BVU55791 Bluetongue virus strain 13B89Z VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 ttgcgtcctcctctctcaac 431 |||||||||||||||||||| Sbjct: 641 ttgcgtcctcctctctcaac 622
>gb|U55789.1|BVU55789 Bluetongue virus strain 13B81X VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 ttgcgtcctcctctctcaac 431 |||||||||||||||||||| Sbjct: 641 ttgcgtcctcctctctcaac 622
>gb|U55788.1|BVU55788 Bluetongue virus strain 13B81V VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 ttgcgtcctcctctctcaac 431 |||||||||||||||||||| Sbjct: 641 ttgcgtcctcctctctcaac 622
>gb|U55787.1|BVU55787 Bluetongue virus strain 11UC8 VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 ttgcgtcctcctctctcaac 431 |||||||||||||||||||| Sbjct: 641 ttgcgtcctcctctctcaac 622
>gb|U55785.1|BVU55785 Bluetongue virus strain 11C81Z VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 ttgcgtcctcctctctcaac 431 |||||||||||||||||||| Sbjct: 641 ttgcgtcctcctctctcaac 622
>gb|U55784.1|BVU55784 Bluetongue virus strain 11O81Z VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 ttgcgtcctcctctctcaac 431 |||||||||||||||||||| Sbjct: 641 ttgcgtcctcctctctcaac 622
>gb|U55781.1|BVU55781 Bluetongue virus strain 10O80Z VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 ttgcgtcctcctctctcaac 431 |||||||||||||||||||| Sbjct: 641 ttgcgtcctcctctctcaac 622
>gb|U55780.1|BVU55780 Bluetongue virus strain 10O80V VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 ttgcgtcctcctctctcaac 431 |||||||||||||||||||| Sbjct: 641 ttgcgtcctcctctctcaac 622
>gb|U55778.1|BVU55778 Bluetongue virus strain 10B80Y VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 ttgcgtcctcctctctcaac 431 |||||||||||||||||||| Sbjct: 641 ttgcgtcctcctctctcaac 622
>gb|U41745.1|HSU41745 Human PDGF associated protein mRNA, complete cds Length = 837 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 372 tttgcttccctatcctcttccttcttcc 399 ||||||| ||| |||||||||||||||| Sbjct: 512 tttgctttcctttcctcttccttcttcc 485
>emb|AL929394.13| Mouse DNA sequence from clone RP23-356H24 on chromosome 4, complete sequence Length = 47222 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 ctttgcttccctatcctctt 390 |||||||||||||||||||| Sbjct: 36223 ctttgcttccctatcctctt 36242
>gb|AC005244.1|AC005244 Homo sapiens chromosome 17, clone hRPK.471_L_13, complete sequence Length = 127506 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 tcctcttccttcttcctctc 403 |||||||||||||||||||| Sbjct: 11325 tcctcttccttcttcctctc 11306 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 tcctcttccttcttcctctc 403 |||||||||||||||||||| Sbjct: 11298 tcctcttccttcttcctctc 11279
>emb|AL773578.1|HS265B9 Homo sapiens chromosome 21 from PAC RP1-265B9 map 21q22.2,D21S349-MX1, complete sequence Length = 157662 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 cctcttccttcttcctctcc 404 |||||||||||||||||||| Sbjct: 29824 cctcttccttcttcctctcc 29805
>gb|AC126931.4| Mus musculus BAC clone RP23-389M9 from 9, complete sequence Length = 189423 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 tcctcttccttcttcctctc 403 |||||||||||||||||||| Sbjct: 13730 tcctcttccttcttcctctc 13749
>emb|AL929263.4| Zebrafish DNA sequence from clone CH211-242M24 in linkage group 8, complete sequence Length = 150413 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 tcctcttccttcttcctctc 403 |||||||||||||||||||| Sbjct: 66736 tcctcttccttcttcctctc 66717
>emb|AL672081.6| Mouse DNA sequence from clone RP23-319D17 on chromosome X, complete sequence Length = 194141 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 tcctcttccttcttcctctc 403 |||||||||||||||||||| Sbjct: 182 tcctcttccttcttcctctc 163
>emb|AL162891.4|CNS01RI6 Human chromosome 14 DNA sequence BAC R-353P15 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 163452 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 taataatggagtttatagtaacaa 24 |||| ||||||||||||||||||| Sbjct: 58905 taatgatggagtttatagtaacaa 58928
>emb|AL844884.5| Mouse DNA sequence from clone RP23-266B14 on chromosome 2, complete sequence Length = 150285 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 tcctcttccttcttcctctc 403 |||||||||||||||||||| Sbjct: 115343 tcctcttccttcttcctctc 115362
>emb|AL772269.4| Mouse DNA sequence from clone RP23-31K8 on chromosome X, complete sequence Length = 119972 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 tcctcttccttcttcctctc 403 |||||||||||||||||||| Sbjct: 118154 tcctcttccttcttcctctc 118135 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,126,256 Number of Sequences: 3902068 Number of extensions: 5126256 Number of successful extensions: 111044 Number of sequences better than 10.0: 115 Number of HSP's better than 10.0 without gapping: 115 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 110789 Number of HSP's gapped (non-prelim): 255 length of query: 590 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 567 effective length of database: 17,143,297,704 effective search space: 9720249798168 effective search space used: 9720249798168 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
