ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd21i10 |
|---|---|
| Clone Library Name | barley_pub |
>ACA11_ARATH (Q9M2L4) Putative calcium-transporting ATPase 11, plasma| membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 11) Length = 1025 Score = 145 bits (366), Expect = 8e-35 Identities = 73/121 (60%), Positives = 84/121 (69%) Frame = -2 Query: 553 NGPDSTTVLNTFIFNSFVFCQVFNEVNSREMEKINIFRGLIGNWVFLGVISATVVFQVVI 374 NGPDST VLNT IFNSFVFCQVFNEVNSRE+EKIN+F G+ +WVF+ V++ATV FQV+I Sbjct: 906 NGPDSTIVLNTIIFNSFVFCQVFNEVNSREIEKINVFEGMFKSWVFVAVMTATVGFQVII 965 Query: 373 IEFLGTFASTVPLSWQFWXXXXXXXXXXXXXXXXLKCIPVKSGEISGSPHGYRPLANGPD 194 +EFLG FASTVPLSWQ W LKCIPV+S GY L +GP Sbjct: 966 VEFLGAFASTVPLSWQHWLLCILIGSVSMILAVGLKCIPVESNR---HHDGYELLPSGPS 1022 Query: 193 D 191 D Sbjct: 1023 D 1023
>ACA4_ARATH (O22218) Calcium-transporting ATPase 4, plasma membrane-type (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 4) Length = 1030 Score = 140 bits (353), Expect = 2e-33 Identities = 69/119 (57%), Positives = 83/119 (69%) Frame = -2 Query: 553 NGPDSTTVLNTFIFNSFVFCQVFNEVNSREMEKINIFRGLIGNWVFLGVISATVVFQVVI 374 +GPDST VLNT IFNSFVFCQVFNE+NSRE+EKIN+F+G+ +WVF V++ TVVFQV+I Sbjct: 909 DGPDSTAVLNTVIFNSFVFCQVFNEINSREIEKINVFKGMFNSWVFTWVMTVTVVFQVII 968 Query: 373 IEFLGTFASTVPLSWQFWXXXXXXXXXXXXXXXXLKCIPVKSGEISGSPHGYRPLANGP 197 +EFLG FASTVPLSWQ W LKC+PV+S GY L +GP Sbjct: 969 VEFLGAFASTVPLSWQHWLLSILIGSLNMIVAVILKCVPVESRH---HHDGYDLLPSGP 1024
>ACA2_ARATH (O81108) Calcium-transporting ATPase 2, plasma membrane-type (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 2) Length = 1014 Score = 116 bits (290), Expect = 5e-26 Identities = 57/100 (57%), Positives = 72/100 (72%) Frame = -2 Query: 553 NGPDSTTVLNTFIFNSFVFCQVFNEVNSREMEKINIFRGLIGNWVFLGVISATVVFQVVI 374 +GPDST +LNT IFN FVFCQVFNE++SREME+I++F+G++ N+VF+ VI ATV FQ++I Sbjct: 915 DGPDSTLMLNTLIFNCFVFCQVFNEISSREMEEIDVFKGILDNYVFVVVIGATVFFQIII 974 Query: 373 IEFLGTFASTVPLSWQFWXXXXXXXXXXXXXXXXLKCIPV 254 IEFLGTFAST PL+ W LK IPV Sbjct: 975 IEFLGTFASTTPLTITQWIFSIFIGFLGMPIAAGLKTIPV 1014
>ACA7_ARATH (O64806) Putative calcium-transporting ATPase 7, plasma membrane-type| (EC 3.6.3.8) (Ca(2+)-ATPase isoform 7) Length = 1015 Score = 113 bits (282), Expect = 4e-25 Identities = 58/99 (58%), Positives = 70/99 (70%) Frame = -2 Query: 550 GPDSTTVLNTFIFNSFVFCQVFNEVNSREMEKINIFRGLIGNWVFLGVISATVVFQVVII 371 G DST VLNT IFN FVFCQVFNEV+SREME+I++F+G++ N+VF+ VI ATV FQ++II Sbjct: 917 GSDSTLVLNTLIFNCFVFCQVFNEVSSREMEEIDVFKGILDNYVFVVVIGATVFFQIIII 976 Query: 370 EFLGTFASTVPLSWQFWXXXXXXXXXXXXXXXXLKCIPV 254 EFLGTFAST PL+ W LK IPV Sbjct: 977 EFLGTFASTTPLTIVQWFFSIFVGFLGMPIAAGLKKIPV 1015
>ACA1_ARATH (Q37145) Calcium-transporting ATPase 1, chloroplast precursor (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) Length = 1020 Score = 113 bits (282), Expect = 4e-25 Identities = 56/102 (54%), Positives = 70/102 (68%) Frame = -2 Query: 553 NGPDSTTVLNTFIFNSFVFCQVFNEVNSREMEKINIFRGLIGNWVFLGVISATVVFQVVI 374 +GPDS LNT IFN FVFCQVFNE++SREMEKI++F+G++ N+VF+ V++ TVVFQV+I Sbjct: 918 DGPDSDLTLNTLIFNIFVFCQVFNEISSREMEKIDVFKGILKNYVFVAVLTCTVVFQVII 977 Query: 373 IEFLGTFASTVPLSWQFWXXXXXXXXXXXXXXXXLKCIPVKS 248 IE LGTFA T PL+ W LK IPV S Sbjct: 978 IELLGTFADTTPLNLGQWLVSIILGFLGMPVAAALKMIPVGS 1019
>ACA10_ARATH (Q9SZR1) Putative calcium-transporting ATPase 10, plasma| membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 10) Length = 1069 Score = 105 bits (263), Expect = 7e-23 Identities = 51/104 (49%), Positives = 67/104 (64%) Frame = -2 Query: 547 PDSTTVLNTFIFNSFVFCQVFNEVNSREMEKINIFRGLIGNWVFLGVISATVVFQVVIIE 368 P++ V NT IFN+FV CQVFNE N+R+ ++INIFRG++ N +F+G+IS T+V QVVI+E Sbjct: 952 PNAERVKNTVIFNAFVICQVFNEFNARKPDEINIFRGVLRNHLFVGIISITIVLQVVIVE 1011 Query: 367 FLGTFASTVPLSWQFWXXXXXXXXXXXXXXXXLKCIPVKSGEIS 236 FLGTFAST L W+ W K IPV +S Sbjct: 1012 FLGTFASTTKLDWEMWLVCIGIGSISWPLAVIGKLIPVPETPVS 1055
>ACA8_ARATH (Q9LF79) Calcium-transporting ATPase 8, plasma membrane-type (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 8) Length = 1074 Score = 94.7 bits (234), Expect = 2e-19 Identities = 47/102 (46%), Positives = 64/102 (62%) Frame = -2 Query: 541 STTVLNTFIFNSFVFCQVFNEVNSREMEKINIFRGLIGNWVFLGVISATVVFQVVIIEFL 362 +T V NT IFN+FV CQ FNE N+R+ ++ NIF+G+I N +F+G+I T+V QV+I+EFL Sbjct: 952 ATRVKNTIIFNAFVLCQAFNEFNARKPDEKNIFKGVIKNRLFMGIIVITLVLQVIIVEFL 1011 Query: 361 GTFASTVPLSWQFWXXXXXXXXXXXXXXXXLKCIPVKSGEIS 236 G FAST L+W+ W K IPV + IS Sbjct: 1012 GKFASTTKLNWKQWLICVGIGVISWPLALVGKFIPVPAAPIS 1053
>ACA9_ARATH (Q9LU41) Putative calcium-transporting ATPase 9, plasma membrane-type| (EC 3.6.3.8) (Ca(2+)-ATPase isoform 9) Length = 1073 Score = 89.0 bits (219), Expect = 9e-18 Identities = 41/106 (38%), Positives = 60/106 (56%) Frame = -2 Query: 553 NGPDSTTVLNTFIFNSFVFCQVFNEVNSREMEKINIFRGLIGNWVFLGVISATVVFQVVI 374 N + V NT IFN+FV CQ+FNE N+R+ +++N+FRG+ N +F+ ++ T + Q++I Sbjct: 952 NHAHAVEVKNTMIFNAFVMCQIFNEFNARKPDEMNVFRGVNKNPLFVAIVGVTFILQIII 1011 Query: 373 IEFLGTFASTVPLSWQFWXXXXXXXXXXXXXXXXLKCIPVKSGEIS 236 + FLG FA TV L WQ W K IPV +S Sbjct: 1012 VTFLGKFAHTVRLGWQLWLASIIIGLVSWPLAIVGKLIPVPKTPMS 1057
>ACA12_ARATH (Q9LY77) Putative calcium-transporting ATPase 12, plasma| membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 12) Length = 1033 Score = 87.4 bits (215), Expect = 2e-17 Identities = 44/93 (47%), Positives = 58/93 (62%) Frame = -2 Query: 532 VLNTFIFNSFVFCQVFNEVNSREMEKINIFRGLIGNWVFLGVISATVVFQVVIIEFLGTF 353 V +T IFN+FV CQVFNE N+REMEK N+F+GL N +F+G+I+ T+V QV+++EFL F Sbjct: 914 VKDTLIFNTFVLCQVFNEFNAREMEKKNVFKGLHRNRLFIGIIAITIVLQVIMVEFLKKF 973 Query: 352 ASTVPLSWQFWXXXXXXXXXXXXXXXXLKCIPV 254 A TV L+ W K IPV Sbjct: 974 ADTVRLNGWQWGTCIALASLSWPIGFFTKFIPV 1006
>ACA13_ARATH (Q9LIK7) Putative calcium-transporting ATPase 13, plasma| membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 13) Length = 1017 Score = 83.2 bits (204), Expect = 5e-16 Identities = 43/93 (46%), Positives = 56/93 (60%) Frame = -2 Query: 532 VLNTFIFNSFVFCQVFNEVNSREMEKINIFRGLIGNWVFLGVISATVVFQVVIIEFLGTF 353 V NT IFN+FV CQVFNE N+R +EK N+F+GL N +F+G+I TVV QVV++EFL F Sbjct: 910 VKNTLIFNTFVLCQVFNEFNARSLEKKNVFKGLHKNRLFIGIIVVTVVLQVVMVEFLKRF 969 Query: 352 ASTVPLSWQFWXXXXXXXXXXXXXXXXLKCIPV 254 A T L+ W +K +PV Sbjct: 970 ADTERLNLGQWGVCIAIAAASWPIGWLVKSVPV 1002
>AT2B3_HUMAN (Q16720) Plasma membrane calcium-transporting ATPase 3 (EC 3.6.3.8)| (PMCA3) (Plasma membrane calcium pump isoform 3) (Plasma membrane calcium ATPase isoform 3) Length = 1220 Score = 57.4 bits (137), Expect = 3e-08 Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 1/69 (1%) Frame = -2 Query: 523 TFIFNSFVFCQVFNEVNSREME-KINIFRGLIGNWVFLGVISATVVFQVVIIEFLGTFAS 347 T IFN+FV Q+FNE+N+R++ + N+F G+ N +F ++ T Q+VI++F G S Sbjct: 970 TIIFNTFVMMQLFNEINARKIHGERNVFDGIFSNPIFCTIVLGTFGIQIVIVQFGGKPFS 1029 Query: 346 TVPLSWQFW 320 PLS + W Sbjct: 1030 CSPLSTEQW 1038
>AT2B3_RAT (Q64568) Plasma membrane calcium-transporting ATPase 3 (EC 3.6.3.8)| (PMCA3) (Plasma membrane calcium pump isoform 3) (Plasma membrane calcium ATPase isoform 3) Length = 1258 Score = 57.4 bits (137), Expect = 3e-08 Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 1/69 (1%) Frame = -2 Query: 523 TFIFNSFVFCQVFNEVNSREME-KINIFRGLIGNWVFLGVISATVVFQVVIIEFLGTFAS 347 T IFN+FV Q+FNE+N+R++ + N+F G+ N +F ++ T Q+VI++F G S Sbjct: 970 TIIFNTFVMMQLFNEINARKIHGERNVFDGIFSNPIFCTIVLGTFGIQIVIVQFGGKPFS 1029 Query: 346 TVPLSWQFW 320 PLS + W Sbjct: 1030 CSPLSTEQW 1038
>AT2B1_PIG (P23220) Plasma membrane calcium-transporting ATPase 1 (EC 3.6.3.8)| (PMCA1) (Plasma membrane calcium pump isoform 1) Length = 1220 Score = 56.6 bits (135), Expect = 5e-08 Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 1/69 (1%) Frame = -2 Query: 523 TFIFNSFVFCQVFNEVNSREME-KINIFRGLIGNWVFLGVISATVVFQVVIIEFLGTFAS 347 T +FN+FV Q+FNE+N+R++ + N+F G+ N +F ++ T V Q++I++F G S Sbjct: 973 TIVFNTFVLMQLFNEINARKIHGERNVFEGIFNNAIFCTIVLGTFVVQIIIVQFGGKPFS 1032 Query: 346 TVPLSWQFW 320 LS + W Sbjct: 1033 CSELSIEQW 1041
>AT2B2_OREMO (P58165) Plasma membrane calcium-transporting ATPase 2 (EC 3.6.3.8)| (PMCA2) (Plasma membrane calcium pump isoform 2) (Plasma membrane calcium ATPase isoform 2) (Fragment) Length = 1112 Score = 56.6 bits (135), Expect = 5e-08 Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 1/69 (1%) Frame = -2 Query: 523 TFIFNSFVFCQVFNEVNSREME-KINIFRGLIGNWVFLGVISATVVFQVVIIEFLGTFAS 347 T IFN+FV Q+FNE+N+R++ + N+F G+ N +F ++ T Q+VI++F G S Sbjct: 979 TIIFNTFVMMQLFNEINARKIHGERNVFDGIFRNPIFCSIVFGTFAVQIVIVQFGGKPFS 1038 Query: 346 TVPLSWQFW 320 PL + W Sbjct: 1039 CQPLDLEKW 1047
>AT2B4_HUMAN (P23634) Plasma membrane calcium-transporting ATPase 4 (EC 3.6.3.8)| (PMCA4) (Plasma membrane calcium pump isoform 4) (Plasma membrane calcium ATPase isoform 4) Length = 1241 Score = 56.6 bits (135), Expect = 5e-08 Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 1/69 (1%) Frame = -2 Query: 523 TFIFNSFVFCQVFNEVNSREME-KINIFRGLIGNWVFLGVISATVVFQVVIIEFLGTFAS 347 T +FN+FV Q+FNE+NSR++ + N+F G+ N +F V+ T + Q+ I+EF G S Sbjct: 961 TIVFNTFVLMQLFNEINSRKIHGEKNVFSGIYRNIIFCSVVLGTFICQIFIVEFGGKPFS 1020 Query: 346 TVPLSWQFW 320 LS W Sbjct: 1021 CTSLSLSQW 1029
>AT2B1_RABIT (Q00804) Plasma membrane calcium-transporting ATPase 1 (EC 3.6.3.8)| (PMCA1) (Plasma membrane calcium pump isoform 1) Length = 1249 Score = 56.6 bits (135), Expect = 5e-08 Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 1/69 (1%) Frame = -2 Query: 523 TFIFNSFVFCQVFNEVNSREME-KINIFRGLIGNWVFLGVISATVVFQVVIIEFLGTFAS 347 T +FN FV Q+FNE+N+R++ + N+F G+ N +F ++ T V Q++I++F G S Sbjct: 973 TIVFNIFVLMQLFNEINARKIHGERNVFEGIFNNAIFCTIVLGTFVVQIIIVQFAGKPFS 1032 Query: 346 TVPLSWQFW 320 LS + W Sbjct: 1033 CSELSVEQW 1041
>AT2B1_RAT (P11505) Plasma membrane calcium-transporting ATPase 1 (EC 3.6.3.8)| (PMCA1) (Plasma membrane calcium pump isoform 1) (Plasma membrane calcium ATPase isoform 1) Length = 1258 Score = 56.6 bits (135), Expect = 5e-08 Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 1/69 (1%) Frame = -2 Query: 523 TFIFNSFVFCQVFNEVNSREME-KINIFRGLIGNWVFLGVISATVVFQVVIIEFLGTFAS 347 T +FN+FV Q+FNE+N+R++ + N+F G+ N +F ++ T V Q++I++F G S Sbjct: 973 TIVFNTFVLMQLFNEINARKIHGERNVFEGIFNNAIFCTIVLGTFVVQIIIVQFGGKPFS 1032 Query: 346 TVPLSWQFW 320 LS + W Sbjct: 1033 CSELSIEQW 1041
>AT2B1_HUMAN (P20020) Plasma membrane calcium-transporting ATPase 1 (EC 3.6.3.8)| (PMCA1) (Plasma membrane calcium pump isoform 1) (Plasma membrane calcium ATPase isoform 1) Length = 1258 Score = 56.6 bits (135), Expect = 5e-08 Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 1/69 (1%) Frame = -2 Query: 523 TFIFNSFVFCQVFNEVNSREME-KINIFRGLIGNWVFLGVISATVVFQVVIIEFLGTFAS 347 T +FN+FV Q+FNE+N+R++ + N+F G+ N +F ++ T V Q++I++F G S Sbjct: 973 TIVFNTFVLMQLFNEINARKIHGERNVFEGIFNNAIFCTIVLGTFVVQIIIVQFGGKPFS 1032 Query: 346 TVPLSWQFW 320 LS + W Sbjct: 1033 CSELSIEQW 1041
>AT2B2_RAT (P11506) Plasma membrane calcium-transporting ATPase 2 (EC 3.6.3.8)| (PMCA2) (Plasma membrane calcium pump isoform 2) (Plasma membrane calcium ATPase isoform 2) Length = 1243 Score = 55.5 bits (132), Expect = 1e-07 Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 1/69 (1%) Frame = -2 Query: 523 TFIFNSFVFCQVFNEVNSREME-KINIFRGLIGNWVFLGVISATVVFQVVIIEFLGTFAS 347 T IFN+FV Q+FNE+N+R++ + N+F G+ N +F ++ T Q+VI++F G S Sbjct: 996 TIIFNTFVMMQLFNEINARKIHGERNVFDGIFRNPIFCTIVLGTFAIQIVIVQFGGKPFS 1055 Query: 346 TVPLSWQFW 320 PL W Sbjct: 1056 CSPLQLDQW 1064
>AT2B2_HUMAN (Q01814) Plasma membrane calcium-transporting ATPase 2 (EC 3.6.3.8)| (PMCA2) (Plasma membrane calcium pump isoform 2) (Plasma membrane calcium ATPase isoform 2) Length = 1243 Score = 55.5 bits (132), Expect = 1e-07 Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 1/69 (1%) Frame = -2 Query: 523 TFIFNSFVFCQVFNEVNSREME-KINIFRGLIGNWVFLGVISATVVFQVVIIEFLGTFAS 347 T IFN+FV Q+FNE+N+R++ + N+F G+ N +F ++ T Q+VI++F G S Sbjct: 996 TIIFNTFVMMQLFNEINARKIHGERNVFDGIFRNPIFCTIVLGTFAIQIVIVQFGGKPFS 1055 Query: 346 TVPLSWQFW 320 PL W Sbjct: 1056 CSPLQLDQW 1064
>AT2B2_MOUSE (Q9R0K7) Plasma membrane calcium-transporting ATPase 2 (EC 3.6.3.8)| (PMCA2) (Plasma membrane calcium pump isoform 2) (Plasma membrane calcium ATPase isoform 2) Length = 1198 Score = 55.5 bits (132), Expect = 1e-07 Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 1/69 (1%) Frame = -2 Query: 523 TFIFNSFVFCQVFNEVNSREME-KINIFRGLIGNWVFLGVISATVVFQVVIIEFLGTFAS 347 T IFN+FV Q+FNE+N+R++ + N+F G+ N +F ++ T Q+VI++F G S Sbjct: 951 TIIFNTFVMMQLFNEINARKIHGERNVFDGIFRNPIFCTIVLGTFAIQIVIVQFGGKPFS 1010 Query: 346 TVPLSWQFW 320 PL W Sbjct: 1011 CSPLQLDQW 1019
>AT2B4_RAT (Q64542) Plasma membrane calcium-transporting ATPase 4 (EC 3.6.3.8)| (PMCA4) (Plasma membrane calcium pump isoform 4) (Plasma membrane calcium ATPase isoform 4) Length = 1203 Score = 52.4 bits (124), Expect = 9e-07 Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 1/69 (1%) Frame = -2 Query: 523 TFIFNSFVFCQVFNEVNSREME-KINIFRGLIGNWVFLGVISATVVFQVVIIEFLGTFAS 347 T +FN+FV Q+FNE+NSR++ + N+F G+ N +F V+ T Q++I+E G S Sbjct: 961 TIVFNTFVLMQLFNEINSRKIHGEKNVFAGVYRNIIFCSVVLGTFFCQILIVEVGGKPFS 1020 Query: 346 TVPLSWQFW 320 L+ + W Sbjct: 1021 CTNLTMEQW 1029
>ATC1_DICDI (P54678) Probable calcium-transporting ATPase PAT1 (EC 3.6.3.-)| Length = 1115 Score = 50.1 bits (118), Expect = 4e-06 Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 1/69 (1%) Frame = -2 Query: 523 TFIFNSFVFCQVFNEVNSREM-EKINIFRGLIGNWVFLGVISATVVFQVVIIEFLGTFAS 347 T +FN FVF Q+FNE+N+R + + N F+ N +F+ V+ T+ Q++ + F G+ S Sbjct: 879 TLVFNCFVFLQLFNEINARVLGSRTNPFKNFFNNPIFIAVMIFTLGVQIIFVTFGGSATS 938 Query: 346 TVPLSWQFW 320 T L W Sbjct: 939 TDSLYIVEW 947
>EXOC2_ARATH (Q8S3U9) Exocyst complex component 2 (Exocyst complex component| Sec5) Length = 1090 Score = 33.9 bits (76), Expect = 0.33 Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 2/104 (1%) Frame = +2 Query: 119 WRCNRAKNSKCNL--DPSSITLLQLYVIRAVGKRPVTMWTSRNLTRFYRNALQDGSNNQA 292 + C ++ S+ NL +P Q IR+V T NL R+++ G + A Sbjct: 309 FNCMKSVTSRANLAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSIIRSSISKGEYDLA 368 Query: 293 DGSYTNAHQPELPAEWNSARKSAEKLDDHHLEYHRRAYYPKEDP 424 Y A LP+ N ++ E+++ LE+ Y EDP Sbjct: 369 VREYKKAKSIALPSHVNILKRVLEEVEKVMLEFKGTLYKSMEDP 412
>AT2C1_BOVIN (P57709) Calcium-transporting ATPase type 2C member 1 (EC 3.6.3.8)| (ATPase 2C1) (Secretory pathway Ca(2+)-transporting ATPase) Length = 953 Score = 33.5 bits (75), Expect = 0.43 Identities = 17/53 (32%), Positives = 28/53 (52%) Frame = -2 Query: 523 TFIFNSFVFCQVFNEVNSREMEKINIFRGLIGNWVFLGVISATVVFQVVIIEF 365 T F FVF +FN ++SR K GL N +F + +++ Q+++I F Sbjct: 843 TMTFTCFVFFDMFNALSSRSQTKSVFEIGLCSNKMFCYAVLGSIMGQLLVIYF 895
>AT2C1_MOUSE (Q80XR2) Calcium-transporting ATPase type 2C member 1 (EC 3.6.3.8)| (ATPase 2C1) (ATP-dependent Ca(2+) pump PMR1) Length = 918 Score = 33.5 bits (75), Expect = 0.43 Identities = 17/53 (32%), Positives = 28/53 (52%) Frame = -2 Query: 523 TFIFNSFVFCQVFNEVNSREMEKINIFRGLIGNWVFLGVISATVVFQVVIIEF 365 T F FVF +FN ++SR K GL N +F + +++ Q+++I F Sbjct: 808 TMTFTCFVFFDMFNALSSRSQTKSVFEIGLCSNKMFCYAVLGSIMGQLLVIYF 860
>AT2C1_RAT (Q64566) Calcium-transporting ATPase type 2C member 1 (EC 3.6.3.8)| (ATPase 2C1) (ATP-dependent Ca(2+) pump PMR1) Length = 919 Score = 33.5 bits (75), Expect = 0.43 Identities = 17/53 (32%), Positives = 28/53 (52%) Frame = -2 Query: 523 TFIFNSFVFCQVFNEVNSREMEKINIFRGLIGNWVFLGVISATVVFQVVIIEF 365 T F FVF +FN ++SR K GL N +F + +++ Q+++I F Sbjct: 809 TMTFTCFVFFDMFNALSSRSQTKSVFEIGLCSNKMFCYAVLGSIMGQLLVIYF 861
>AT2C1_HUMAN (P98194) Calcium-transporting ATPase type 2C member 1 (EC 3.6.3.8)| (ATPase 2C1) (ATP-dependent Ca(2+) pump PMR1) Length = 919 Score = 33.5 bits (75), Expect = 0.43 Identities = 17/53 (32%), Positives = 28/53 (52%) Frame = -2 Query: 523 TFIFNSFVFCQVFNEVNSREMEKINIFRGLIGNWVFLGVISATVVFQVVIIEF 365 T F FVF +FN ++SR K GL N +F + +++ Q+++I F Sbjct: 809 TMTFTCFVFFDMFNALSSRSQTKSVFEIGLCSNRMFCYAVLGSIMGQLLVIYF 861
>MYADM_RAT (Q6VBQ5) Myeloid-associated differentiation marker (Myeloid| up-regulated protein) Length = 318 Score = 32.7 bits (73), Expect = 0.73 Identities = 18/57 (31%), Positives = 27/57 (47%) Frame = -2 Query: 496 CQVFNEVNSREMEKINIFRGLIGNWVFLGVISATVVFQVVIIEFLGTFASTVPLSWQ 326 C F+ V S + + G +GNW V +++IE LG F + PLSW+ Sbjct: 42 CVAFSLVAS-----VGAWTGPMGNWAMFTWCFCFAVTLIILIEELGGFQARFPLSWR 93
>AT2C2_HUMAN (O75185) Probable calcium-transporting ATPase KIAA0703 (EC 3.6.3.8)| Length = 963 Score = 32.7 bits (73), Expect = 0.73 Identities = 17/57 (29%), Positives = 28/57 (49%) Frame = -2 Query: 541 STTVLNTFIFNSFVFCQVFNEVNSREMEKINIFRGLIGNWVFLGVISATVVFQVVII 371 ST T F FVF +FN + R K+ G + N +FL + +++ Q+ +I Sbjct: 851 STPRTTTMTFTCFVFFDLFNALTCRSQTKLIFEIGFLRNHMFLYSVLGSILGQLAVI 907
>ATC1_YARLI (O43108) Calcium-transporting ATPase 1 (EC 3.6.3.8) (P-type calcium| ATPase) Length = 928 Score = 32.0 bits (71), Expect = 1.2 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Frame = -2 Query: 523 TFIFNSFVFCQVFNEVNSREMEKINIFRGLIGNWVFLGVISATVVFQ--VVIIEFLGTFA 350 T F FVF +FN + R K G N +FL A+++ Q VV + FL + Sbjct: 825 TMTFTCFVFYDMFNALACRSATKSVFEIGFFSNKMFLYACGASIIGQLAVVYVPFLQSVF 884 Query: 349 STVPLS 332 T LS Sbjct: 885 QTEALS 890
>OSH2_YEAST (Q12451) Oxysterol-binding protein homolog 2| Length = 1283 Score = 30.4 bits (67), Expect = 3.6 Identities = 29/122 (23%), Positives = 46/122 (37%) Frame = +2 Query: 62 KSSLAAHTCTTDGLNKISGWRCNRAKNSKCNLDPSSITLLQLYVIRAVGKRPVTMWTSRN 241 +++ +A TD K W+ N NL P +ITL + + W Sbjct: 1147 RTAASAGNGPTDDGTKFLIWKANDRPEEPFNLTPFAITL-------NAPQPHLLPWLPPT 1199 Query: 242 LTRFYRNALQDGSNNQADGSYTNAHQPELPAEWNSARKSAEKLDDHHLEYHRRAYYPKED 421 TR L+ DG Y A + E R + K ++++LEYH + + Sbjct: 1200 DTR-----LRPDQRAMEDGRYDEAGDEKFRVE-EKQRAARRKREENNLEYHPQWFVRDTH 1253 Query: 422 PI 427 PI Sbjct: 1254 PI 1255
>HMEB_ARCFU (O29750) Hdr-like menaquinol oxidoreductase integral membrane| subunit (Hme subunit B) Length = 395 Score = 29.6 bits (65), Expect = 6.1 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 2/73 (2%) Frame = -2 Query: 547 PDSTTVLNTFIFNS-FVFCQVFNEVNSREMEKINIF-RGLIGNWVFLGVISATVVFQVVI 374 P S N F+++S FV C ++ V EMEK F GL W L ++ V Sbjct: 123 PTSIFSWNAFLYSSYFVICSIYLLVQFEEMEKATRFMAGLAVFWAVLVHSGTGAIYSFVY 182 Query: 373 IEFLGTFASTVPL 335 + L A T P+ Sbjct: 183 SKELYHSALTPPM 195
>YRR2_CAEEL (Q09345) Hypothetical protein R144.2| Length = 823 Score = 29.3 bits (64), Expect = 8.0 Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 1/41 (2%) Frame = +2 Query: 236 RNLTRFYRNALQDGSNNQAD-GSYTNAHQPELPAEWNSARK 355 RN T N G NN G Y N HQP+ A W A K Sbjct: 581 RNQTPPPANLPIPGMNNAGQRGGYHNRHQPQQNARWGGANK 621
>KDKA_XANAC (Q8PNH3) 3-deoxy-D-manno-octulosonic acid kinase (EC 2.7.1.-) (KDO| kinase) Length = 249 Score = 29.3 bits (64), Expect = 8.0 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Frame = +2 Query: 197 RAVGKRPVTMWTSRNLTRFYRNALQ---DGSNNQADGSYTNAHQ 319 R V + P T W RNL R +R+ L+ + S D Y H+ Sbjct: 196 RGVLRIPATRWRERNLKRLHRSLLKLRGNRSREDVDKDYARLHR 239
>TRIB1_MOUSE (Q8K4K4) Tribbles homolog 1 (TRB-1)| Length = 372 Score = 29.3 bits (64), Expect = 8.0 Identities = 16/31 (51%), Positives = 18/31 (58%) Frame = +1 Query: 376 SPPGIPPSRLLPQGRPNCQ*DHGKCLSSPFP 468 SPPG P S PQ P+ Q G C+SSP P Sbjct: 61 SPPGSPCS---PQPPPSTQGTGGSCVSSPGP 88
>SUB2_CANGA (Q6FL17) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 439 Score = 29.3 bits (64), Expect = 8.0 Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 1/89 (1%) Frame = +2 Query: 248 RFYRNALQDGSNNQADGSYTNAHQPELPAEWNSA-RKSAEKLDDHHLEYHRRAYYPKEDP 424 RF +N L+ +++A + Q + E RK A+ LDD LE+++ + K Sbjct: 253 RFLQNPLEIFVDDEAKLTLHGLQQYYIKLEEREKNRKLAQLLDD--LEFNQVIIFVKSTS 310 Query: 425 IANETTENVYLLHFPAVHFVEYLAKHEGV 511 ANE T+ + +FPA+ ++ + E + Sbjct: 311 RANELTKLLNASNFPAITVHGHMKQEERI 339
>SUB2_YEAST (Q07478) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-) (Suppressor| of BRR1 protein 2) Length = 446 Score = 29.3 bits (64), Expect = 8.0 Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 1/89 (1%) Frame = +2 Query: 248 RFYRNALQDGSNNQADGSYTNAHQPELPAEWNSA-RKSAEKLDDHHLEYHRRAYYPKEDP 424 RF +N L+ +++A + Q + E RK A+ LDD LE+++ + K Sbjct: 260 RFLQNPLEIFVDDEAKLTLHGLQQYYIKLEEREKNRKLAQLLDD--LEFNQVIIFVKSTT 317 Query: 425 IANETTENVYLLHFPAVHFVEYLAKHEGV 511 ANE T+ + +FPA+ ++ + E + Sbjct: 318 RANELTKLLNASNFPAITVHGHMKQEERI 346 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,346,685 Number of Sequences: 219361 Number of extensions: 1980085 Number of successful extensions: 6535 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 6265 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6527 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4643056080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
