Clone Name | rbasd21i07 |
---|---|
Clone Library Name | barley_pub |
>HIRP5_MOUSE (Q9QZ23) HIRA-interacting protein 5 (mHIRIP5)| Length = 199 Score = 50.1 bits (118), Expect = 4e-06 Identities = 22/54 (40%), Positives = 37/54 (68%) Frame = -2 Query: 529 EDGVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGDAIKDIRQVFDGDQQPEE 368 EDG+V L+L+G+C+SCPSS T+ GI+ +L + + ++ + QV D D+ E+ Sbjct: 142 EDGIVRLKLQGSCTSCPSSIITLKSGIQNML-QFYIPEVEGVEQVMDDDESDEK 194
>NFU1_YEAST (P32860) NifU-like protein, mitochondrial precursor| Length = 256 Score = 49.3 bits (116), Expect = 7e-06 Identities = 23/49 (46%), Positives = 34/49 (69%) Frame = -2 Query: 523 GVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGDAIKDIRQVFDGDQQ 377 G V LRL+GAC+SC SS T+ GIE +LK + D +K++ Q+ D +Q+ Sbjct: 186 GTVYLRLQGACTSCSSSEVTLKYGIESMLKH-YVDEVKEVIQIMDPEQE 233
>HIRP5_HUMAN (Q9UMS0) HIRA-interacting protein 5| Length = 196 Score = 47.8 bits (112), Expect = 2e-05 Identities = 21/54 (38%), Positives = 36/54 (66%) Frame = -2 Query: 529 EDGVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGDAIKDIRQVFDGDQQPEE 368 EDG+V L+L+G+C+SCPSS T+ GI+ +L + + ++ + QV D + +E Sbjct: 140 EDGIVQLKLQGSCTSCPSSIITLKNGIQNML-QFYIPEVEGVEQVMDDESDEKE 192
>YH9J_SCHPO (Q9UUB8) NifU-like protein C1709.19c| Length = 260 Score = 42.0 bits (97), Expect = 0.001 Identities = 19/49 (38%), Positives = 33/49 (67%) Frame = -2 Query: 523 GVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGDAIKDIRQVFDGDQQ 377 G VSL+L GAC +C SS T+ GI+++LK + ++++ QV D +++ Sbjct: 190 GTVSLKLRGACRTCSSSAVTLKNGIQQMLKHYIPE-VENVVQVLDPEEE 237
>Y2378_PSEPK (Q88KB2) Hypothetical protein PP2378| Length = 194 Score = 40.0 bits (92), Expect = 0.004 Identities = 19/52 (36%), Positives = 29/52 (55%) Frame = -2 Query: 532 VEDGVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGDAIKDIRQVFDGDQQ 377 V+DG+ L+ G C C + T+ GIER L E+ + +K +R V D Q+ Sbjct: 139 VDDGIAVLQFGGGCQGCGQADVTLKEGIERTLLERIPE-LKGVRDVTDHSQK 189
>NIFU_ANASL (P33179) Nitrogen fixation protein nifU (Fragment)| Length = 112 Score = 40.0 bits (92), Expect = 0.004 Identities = 16/40 (40%), Positives = 27/40 (67%) Frame = -2 Query: 532 VEDGVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGDAI 413 V+ +V + L+GAC SCPSST T+ + IE L+++ ++ Sbjct: 68 VDGDIVKVVLQGACGSCPSSTATLKIAIESRLRDRINPSL 107
>NIFU_ANASP (P20628) Nitrogen fixation protein nifU| Length = 300 Score = 37.0 bits (84), Expect = 0.036 Identities = 15/40 (37%), Positives = 26/40 (65%) Frame = -2 Query: 532 VEDGVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGDAI 413 V+ +V + L+GAC SC SST T+ + IE L+++ ++ Sbjct: 256 VDGDIVKVVLQGACGSCSSSTATLKIAIESRLRDRINPSL 295
>NIFU_ANAAZ (Q43885) Nitrogen fixation protein nifU| Length = 300 Score = 37.0 bits (84), Expect = 0.036 Identities = 15/40 (37%), Positives = 26/40 (65%) Frame = -2 Query: 532 VEDGVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGDAI 413 V+ +V + L+GAC SC SST T+ + IE L+++ ++ Sbjct: 256 VDGDIVKVVLQGACGSCSSSTATLKIAIESRLRDRINPSL 295
>NIFU_AZOCH (P23121) Nitrogen fixation protein nifU| Length = 309 Score = 35.8 bits (81), Expect = 0.080 Identities = 31/118 (26%), Positives = 46/118 (38%), Gaps = 22/118 (18%) Frame = -2 Query: 535 SVEDGVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGDAIKDIRQVFDGDQQPE----- 371 +VED + G CS+C + GIERVL E+ + G ++ + Sbjct: 158 TVEDVTKHTKRGGGCSAC-------HEGIERVLSEELAPVARSSSCADQGQEEVKVLAPS 210 Query: 370 ---------ETTPKAVNRH--------LDILRPAIANYGGSVEVLAVDGEDCLVKYDG 248 TPK N L +RP + G VE++ VDG++ VK G Sbjct: 211 RLRSWPRRLRATPKLSNLQRIRRIETVLAAIRPTLQRDKGDVELIDVDGKNIYVKLTG 268
>Y177_PHOPR (Q6LVQ9) Hypothetical protein PBPRA0177| Length = 194 Score = 35.4 bits (80), Expect = 0.10 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -2 Query: 529 EDGVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGDAIKDIRQV 395 EDGV L+ G C+ C T+ GIE+ L +F + +R V Sbjct: 139 EDGVAILQFGGGCNGCSMVDVTLKEGIEKELLAQFAGELTGVRDV 183
>Y1847_PSEAE (Q9I2P8) Hypothetical protein PA1847| Length = 194 Score = 34.7 bits (78), Expect = 0.18 Identities = 17/48 (35%), Positives = 25/48 (52%) Frame = -2 Query: 532 VEDGVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGDAIKDIRQVFD 389 VED + LR G C C T+ G+E+ L E+ + +K +R V D Sbjct: 139 VEDNIAVLRFGGGCQGCGMVDMTLKDGVEKTLIERIPE-LKGVRDVTD 185
>YVN2_AZOVI (P40432) Hypothetical 10.3 kDa protein in vnfA 5'region| Length = 96 Score = 33.9 bits (76), Expect = 0.30 Identities = 16/35 (45%), Positives = 23/35 (65%) Frame = -2 Query: 541 VVSVEDGVVSLRLEGACSSCPSSTTTMNMGIERVL 437 +V+V+D +V LRL+GAC C S T+ G+ R L Sbjct: 48 LVAVQDNIVRLRLKGACVGCAMSAQTLG-GVRREL 81
>NIFU_AZOBR (Q43909) Nitrogen fixation protein nifU| Length = 310 Score = 33.5 bits (75), Expect = 0.40 Identities = 16/44 (36%), Positives = 26/44 (59%) Frame = -2 Query: 541 VVSVEDGVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGDAIK 410 +V ++ + +RL GACS C S TM MG++ L E G+ ++ Sbjct: 257 LVDIDGKDIYVRLTGACSGCSQSAGTM-MGVQAKLVEALGEFVR 299 Score = 30.0 bits (66), Expect = 4.4 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 7/56 (12%) Frame = -2 Query: 328 RPAIANYGGSVEVLAVDGEDCLVKYDG-----PESIGS--GVKAAIKEKFPDITNV 182 RP I GG VE++ +DG+D V+ G +S G+ GV+A + E + V Sbjct: 245 RPQIQRDGGDVELVDIDGKDIYVRLTGACSGCSQSAGTMMGVQAKLVEALGEFVRV 300
>Y486_BUCBP (Q89A55) Hypothetical protein bbp_486| Length = 191 Score = 33.1 bits (74), Expect = 0.52 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Frame = -2 Query: 529 EDGVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGD--AIKDIRQ 398 E G +SL+ G C+ C T+ GIE+ + KF + + DI Q Sbjct: 137 ESGYLSLKFSGGCNGCSMVQKTLKEGIEKQILAKFSEFKGVYDITQ 182
>Y4619_SHEON (Q8E8P2) Hypothetical protein SO4619| Length = 192 Score = 32.7 bits (73), Expect = 0.67 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = -2 Query: 526 DGVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGDAIKDIRQVFD 389 +GV L+ G C+ C T+ GIE+ L + F + +R V D Sbjct: 138 EGVAVLQFGGGCNGCSQVDITLKDGIEKQLLDMFPGELTGVRDVTD 183
>Y2720_VIBCH (Q9KNL2) Hypothetical protein VC2720| Length = 195 Score = 32.3 bits (72), Expect = 0.88 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = -2 Query: 529 EDGVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGDAIKDIRQVFDGDQ 380 +DGV ++ G C+ C T+ GIE+ L +F + +R + D+ Sbjct: 140 DDGVALVQFGGGCNGCSMVDVTLKEGIEKELLAQFAGELTAVRDSTEHDR 189
>MYF5_BOVIN (P17667) Myogenic factor 5 (Myf-5)| Length = 255 Score = 32.0 bits (71), Expect = 1.1 Identities = 36/144 (25%), Positives = 57/144 (39%), Gaps = 20/144 (13%) Frame = -2 Query: 496 ACSSCPSSTTTMNMGIERVLKEKFGDAIKDIRQVFDGDQQPEETTPKAVNRHLDILRPAI 317 AC +C +TTM+ ++E+ +K + Q FD ++ T P ++ILR AI Sbjct: 71 ACKACKRKSTTMDRRKAATMRER--RRLKKVNQAFDTLKRCTTTNPNQRLPKVEILRNAI 128 Query: 316 ANYGGSVEVL--------AVDGEDCLVK-------YDGPESIGSGVKAAIKEKF-----P 197 E+L ++ G+ C DG S + + F P Sbjct: 129 RYIESLQELLREQVENYYSLPGQSCSEPTSPTSSCSDGMPECNSPIWSRKSSSFDSVYCP 188 Query: 196 DITNVVFTQ*STGRLA*CHSSAVN 125 D+ NV T S+ C SS V+ Sbjct: 189 DVPNVYATDKSSLSSLDCLSSIVD 212
>NIFU_PLEBO (Q00241) Nitrogen fixation protein nifU (Fragment)| Length = 205 Score = 32.0 bits (71), Expect = 1.1 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -2 Query: 532 VEDGVVSLRLEGACSSCPSSTTTMNMGIERVLK 434 V+ V + L+GAC SC SST T+ +E L+ Sbjct: 161 VDGDFVKVTLKGACGSCASSTATLKDAVEAKLR 193
>Y2603_XYLFA (Q9PAB5) Hypothetical protein Xf2603| Length = 199 Score = 32.0 bits (71), Expect = 1.1 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -2 Query: 526 DGVVSLRLEGACSSCPSSTTTMNMGIERVLKEK 428 +GVV LR G C C T+ G+E+ L E+ Sbjct: 140 EGVVLLRFGGGCHGCGMVDVTLKQGVEKTLMER 172
>Y2079_XANCP (Q8P8Z9) Hypothetical protein XCC2079| Length = 199 Score = 32.0 bits (71), Expect = 1.1 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Frame = -2 Query: 526 DGVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGD--AIKDIRQVFDGD 383 +GVV LR G C C + T+ GIE+ L + A++D GD Sbjct: 140 EGVVLLRFGGGCHGCGMADVTLKQGIEKTLMGRLPGVIAVRDATDHATGD 189
>Y1979_XYLFT (Q87A52) Hypothetical protein PD1979| Length = 199 Score = 32.0 bits (71), Expect = 1.1 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -2 Query: 526 DGVVSLRLEGACSSCPSSTTTMNMGIERVLKEK 428 +GVV LR G C C + T+ G+E+ L ++ Sbjct: 140 EGVVLLRFGGGCHGCGMADVTLKQGVEKTLMDR 172
>Y2117_XANAC (Q8PKQ2) Hypothetical protein XAC2117| Length = 199 Score = 31.6 bits (70), Expect = 1.5 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Frame = -2 Query: 526 DGVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFG--DAIKDIRQVFDGD 383 +GVV LR G C C + T+ GIE+ L + A++D GD Sbjct: 140 EGVVLLRFGGGCHGCGMADVTLKQGIEKTLMGRVPGVTAVRDATDHATGD 189
>GNTY_SHIFL (P63023) Protein gntY| Length = 191 Score = 31.2 bits (69), Expect = 2.0 Identities = 15/45 (33%), Positives = 24/45 (53%) Frame = -2 Query: 529 EDGVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGDAIKDIRQV 395 EDG L+ G C+ C T+ GIE+ L +F + +K +R + Sbjct: 137 EDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPE-LKGVRDL 180
>GNTY_ECOLI (P63020) Protein gntY| Length = 191 Score = 31.2 bits (69), Expect = 2.0 Identities = 15/45 (33%), Positives = 24/45 (53%) Frame = -2 Query: 529 EDGVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGDAIKDIRQV 395 EDG L+ G C+ C T+ GIE+ L +F + +K +R + Sbjct: 137 EDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPE-LKGVRDL 180
>GNTY_ECOL6 (P63021) Protein gntY| Length = 191 Score = 31.2 bits (69), Expect = 2.0 Identities = 15/45 (33%), Positives = 24/45 (53%) Frame = -2 Query: 529 EDGVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGDAIKDIRQV 395 EDG L+ G C+ C T+ GIE+ L +F + +K +R + Sbjct: 137 EDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPE-LKGVRDL 180
>GNTY_ECO57 (P63022) Protein gntY| Length = 191 Score = 31.2 bits (69), Expect = 2.0 Identities = 15/45 (33%), Positives = 24/45 (53%) Frame = -2 Query: 529 EDGVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGDAIKDIRQV 395 EDG L+ G C+ C T+ GIE+ L +F + +K +R + Sbjct: 137 EDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPE-LKGVRDL 180
>Y433_HAEIN (P31774) Protein HI0433 (ORFG)| Length = 198 Score = 31.2 bits (69), Expect = 2.0 Identities = 13/45 (28%), Positives = 22/45 (48%) Frame = -2 Query: 529 EDGVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGDAIKDIRQV 395 EDG L+ G C+ C T+ G+E+ L F + +K + + Sbjct: 143 EDGYAVLQFGGGCNGCSMVDVTLKDGVEKQLVSLFPNELKGAKDI 187
>Y127_YERPE (Q8ZJI0) Hypothetical protein YPO0127/y3903/YP0128| Length = 191 Score = 30.8 bits (68), Expect = 2.6 Identities = 14/44 (31%), Positives = 25/44 (56%) Frame = -2 Query: 526 DGVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGDAIKDIRQV 395 +G+ L+ G C+ C T+ GIE+ L +KF + +K +R + Sbjct: 138 EGLAILQFGGGCNGCSMVDVTLKEGIEKELLQKFPE-LKGVRDL 180
>Y2735_PSESM (Q881Z4) Hypothetical protein PSPTO2735| Length = 197 Score = 30.8 bits (68), Expect = 2.6 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = -2 Query: 520 VVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGDAIKDIRQVFDGDQQ 377 + L+ G C C + T+ GIER L E+ + + +R V D Q+ Sbjct: 146 IAVLQFGGGCQGCGQADVTLKEGIERTLLERIPE-LSGVRDVTDHTQK 192
>NIFU_RHOSH (Q01180) Nitrogen fixation protein nifU| Length = 246 Score = 30.8 bits (68), Expect = 2.6 Identities = 20/61 (32%), Positives = 30/61 (49%) Frame = -2 Query: 541 VVSVEDGVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGDAIKDIRQVFDGDQQPEETT 362 +V+VE V + L GACS C + T+ G+++ L + G I+ I PEE Sbjct: 188 LVAVEGSKVRVHLTGACSGCQLAALTLG-GLQKRLADTLGRPIRVI---------PEEKR 237 Query: 361 P 359 P Sbjct: 238 P 238
>Y864_VIBVU (Q8DDU2) Hypothetical protein VV1_0864| Length = 194 Score = 30.4 bits (67), Expect = 3.3 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = -2 Query: 523 GVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGDAIKDIRQVFDGDQ 380 GV + G C+ C T+ GIE+ L ++F + +R + D+ Sbjct: 141 GVAIVAFGGGCNGCSMVDVTLKEGIEKELLQQFSGELTAVRDATEHDR 188
>Y227_VIBVY (Q7MPY4) Hypothetical protein VV0227| Length = 194 Score = 30.4 bits (67), Expect = 3.3 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = -2 Query: 523 GVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGDAIKDIRQVFDGDQ 380 GV + G C+ C T+ GIE+ L ++F + +R + D+ Sbjct: 141 GVAIVAFGGGCNGCSMVDVTLKEGIEKELLQQFSGELTAVRDATEHDR 188
>DCUA_HELPJ (Q9ZLC0) Anaerobic C4-dicarboxylate transporter dcuA| Length = 443 Score = 30.4 bits (67), Expect = 3.3 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +3 Query: 171 WVNTTFVMSGNFSLMAAFTPLPMDSGPSYLTR 266 W+ TTF+ + + FT L +DS P+YL R Sbjct: 174 WIPTTFLACMLTAFVMGFTDLKLDSDPNYLER 205
>CPLX1_NARJA (O42106) Complexin-1 (NJ-synaphin-2)| Length = 133 Score = 30.0 bits (66), Expect = 4.4 Identities = 15/57 (26%), Positives = 26/57 (45%) Frame = -2 Query: 442 VLKEKFGDAIKDIRQVFDGDQQPEETTPKAVNRHLDILRPAIANYGGSVEVLAVDGE 272 V+K+ G A KD+ ++ GD++ + K L+ LR A G + + E Sbjct: 4 VMKQALGGATKDMGKMLGGDEEKDPDAEKKEEERLEALRQAEEERAGKYAKMEAERE 60
>Y378_HAEDU (Q7VNV0) Hypothetical protein HD_0378| Length = 199 Score = 30.0 bits (66), Expect = 4.4 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = -2 Query: 529 EDGVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGDAIKDIRQV 395 ED L+ G C+ C T+ GIE+ L F +K ++ V Sbjct: 144 EDKYAILQFGGGCNGCSMVDVTLKEGIEKQLLATFPTELKGVKDV 188
>Y301_WIGBR (Q8D2Q3) Hypothetical protein WIGBR3010| Length = 184 Score = 30.0 bits (66), Expect = 4.4 Identities = 15/47 (31%), Positives = 26/47 (55%) Frame = -2 Query: 529 EDGVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGDAIKDIRQVFD 389 E+ V L+ G C+ C + T+ GIE+ +K+ F + IK + + D Sbjct: 130 ENMFVILKFFGGCNGCSMAKVTLKEGIEKEIKKNFPN-IKGVIDITD 175
>Y198_PHOLL (Q7N9W2) Hypothetical protein plu0198| Length = 191 Score = 29.6 bits (65), Expect = 5.7 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Frame = -2 Query: 529 EDGVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGD--AIKDIRQ 398 +DG L+ G C+ C T+ GIE+ L F + +KD+ + Sbjct: 137 DDGFAILQFGGGCNGCSMVDVTLKEGIEKELLNMFPELKGVKDLTE 182
>Y1557_PASMU (Q9CKP9) Hypothetical protein PM1557| Length = 194 Score = 29.6 bits (65), Expect = 5.7 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = -2 Query: 529 EDGVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGDAIKDIRQV 395 EDG L+ G C+ C T+ GIE+ L F ++ + V Sbjct: 139 EDGYAILQFGGGCNGCSMVDVTLKDGIEKQLLSLFPGELQGAKDV 183
>Y146_VIBPA (Q87TC4) Hypothetical protein VP0146| Length = 194 Score = 29.6 bits (65), Expect = 5.7 Identities = 14/50 (28%), Positives = 23/50 (46%) Frame = -2 Query: 529 EDGVVSLRLEGACSSCPSSTTTMNMGIERVLKEKFGDAIKDIRQVFDGDQ 380 E GV + G C+ C T+ GIE+ L +F + +R + D+ Sbjct: 139 EAGVAIVAFGGGCNGCSMVDVTLKEGIEKELLNQFVGELTAVRDATEHDR 188
>SAPS1_HUMAN (Q9UPN7) SAPS domain family member 1| Length = 881 Score = 29.6 bits (65), Expect = 5.7 Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 15/57 (26%) Frame = -1 Query: 488 QLSQLDDDDEHGHRASAQGE---------------VR*RHQGHPPGVRRGPATRRDD 363 ++ Q DDD+E AQG R G PPGVR G +T +D Sbjct: 616 RIQQFDDDEEEEDEEEAQGSGESDGEDGAWQGSQLARGARLGQPPGVRSGGSTDSED 672
>DCUA_HELPY (O25425) Anaerobic C4-dicarboxylate transporter dcuA| Length = 443 Score = 29.6 bits (65), Expect = 5.7 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +3 Query: 171 WVNTTFVMSGNFSLMAAFTPLPMDSGPSYLTR 266 W+ TTF+ + + FT L +DS P YL R Sbjct: 174 WIPTTFLACMLTAFIMGFTDLKLDSDPHYLER 205
>HIS4_LEPIN (Q8F9R5) 1-(5-phosphoribosyl)-5-[(5-| phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length = 241 Score = 29.3 bits (64), Expect = 7.5 Identities = 15/32 (46%), Positives = 20/32 (62%) Frame = -2 Query: 337 DILRPAIANYGGSVEVLAVDGEDCLVKYDGPE 242 D+L+ A+ NYG V+AVD D +VK G E Sbjct: 111 DLLKYALDNYGKERVVVAVDARDGIVKIAGWE 142
>HIS4_LEPIC (P62354) 1-(5-phosphoribosyl)-5-[(5-| phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length = 241 Score = 29.3 bits (64), Expect = 7.5 Identities = 15/32 (46%), Positives = 20/32 (62%) Frame = -2 Query: 337 DILRPAIANYGGSVEVLAVDGEDCLVKYDGPE 242 D+L+ A+ NYG V+AVD D +VK G E Sbjct: 111 DLLKYALDNYGKERVVVAVDARDGIVKIAGWE 142
>CAPS_CAEBR (Q60PC0) Calcium-dependent secretion activator (Uncoordinated| protein 31) Length = 1261 Score = 29.3 bits (64), Expect = 7.5 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = -2 Query: 334 ILRPAIANYGGSVEVLAVDGEDCLVKYDGPESIGSGVKAAIKEKFPDI 191 ++ PA+ +Y + V G C+ GPE +G+ V KEKF +I Sbjct: 699 LIDPALIHYSFAFCASHVHGNRCMPDRQGPEGVGT-VTLEEKEKFQEI 745
>Y573_BLOFL (Q7VRN1) Hypothetical protein Bfl573| Length = 205 Score = 29.3 bits (64), Expect = 7.5 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = -2 Query: 526 DGVVSLRLEGACSSCPSSTTTMNMGIERVLKE 431 D + L+ G C+ C + T+ GIE+ LK+ Sbjct: 151 DSIAILKFHGGCNGCAMAFYTIKEGIEKTLKK 182
>PYRB_ACIAD (Q6FCR5) Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate| transcarbamylase) (ATCase) Length = 338 Score = 29.3 bits (64), Expect = 7.5 Identities = 21/78 (26%), Positives = 35/78 (44%) Frame = -2 Query: 439 LKEKFGDAIKDIRQVFDGDQQPEETTPKAVNRHLDILRPAIANYGGSVEVLAVDGEDCLV 260 L K D +KD + Q E A++ + R YG + E LA+ DC+V Sbjct: 225 LFNKMDDGVKDCDVIIALRIQNERIDSPALSSQAEFYRM----YGLNQERLALAKPDCIV 280 Query: 259 KYDGPESIGSGVKAAIKE 206 + GP + G + ++I + Sbjct: 281 MHPGPMNRGVEIDSSIAD 298
>CPLX1_HUMAN (O14810) Complexin-1 (Synaphin-2)| Length = 134 Score = 29.3 bits (64), Expect = 7.5 Identities = 20/84 (23%), Positives = 36/84 (42%) Frame = -2 Query: 451 IERVLKEKFGDAIKDIRQVFDGDQQPEETTPKAVNRHLDILRPAIANYGGSVEVLAVDGE 272 +E V+K+ G A KD+ ++ GD++ + K + LR A E Sbjct: 1 MEFVMKQALGGATKDMGKMLGGDEEKDPDAAKKEEERQEALRQA--------------EE 46 Query: 271 DCLVKYDGPESIGSGVKAAIKEKF 200 + KY E+ V+ I++K+ Sbjct: 47 ERKAKYAKMEAEREAVRQGIRDKY 70
>CAPS_CAEEL (Q23658) Calcium-dependent secretion activator (Uncoordinated| protein 31) Length = 1260 Score = 29.3 bits (64), Expect = 7.5 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = -2 Query: 334 ILRPAIANYGGSVEVLAVDGEDCLVKYDGPESIGSGVKAAIKEKFPDI 191 ++ PA+ +Y + V G C+ GPE +G+ V KEKF +I Sbjct: 701 LIDPALIHYSFAFCASHVHGNRCMPDRQGPEGVGT-VTLEEKEKFQEI 747
>DNAJ2_SYNY3 (P73097) Chaperone protein dnaJ 2| Length = 307 Score = 29.3 bits (64), Expect = 7.5 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Frame = -2 Query: 325 PAIANYGGSVEVLAVDGEDCLVKYDGPESIGSGVKAAIKEK-FPD 194 P+ A GG++EV+ +DG LVK P + +G K + +K FP+ Sbjct: 220 PSEAILGGAIEVMTIDG---LVKMTVPAGLKNGQKLRLAKKGFPN 261
>SYFA_NITWN (Q3SWK7) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 369 Score = 28.9 bits (63), Expect = 9.7 Identities = 13/25 (52%), Positives = 19/25 (76%) Frame = -2 Query: 457 MGIERVLKEKFGDAIKDIRQVFDGD 383 MGI+R+ K+G I D+RQ+F+GD Sbjct: 324 MGIDRITMLKYG--IADLRQLFEGD 346
>MYF5_HUMAN (P13349) Myogenic factor 5 (Myf-5)| Length = 255 Score = 28.9 bits (63), Expect = 9.7 Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 20/144 (13%) Frame = -2 Query: 496 ACSSCPSSTTTMNMGIERVLKEKFGDAIKDIRQVFDGDQQPEETTPKAVNRHLDILRPAI 317 AC +C +TTM+ ++E+ +K + Q F+ ++ T P ++ILR AI Sbjct: 71 ACKACKRKSTTMDRRKAATMRER--RRLKKVNQAFETLKRCTTTNPNQRLPKVEILRNAI 128 Query: 316 ANYGGSVEVL--------AVDGEDCLVK-------YDGPESIGSGVKAAIKEKF-----P 197 E+L ++ G+ C DG S V + F P Sbjct: 129 RYIESLQELLREQVENYYSLPGQSCSEPTSPTSNCSDGMPECNSPVWSRKSSTFDSIYCP 188 Query: 196 DITNVVFTQ*STGRLA*CHSSAVN 125 D++NV T ++ C S+ V+ Sbjct: 189 DVSNVYATDKNSLSSLDCLSNIVD 212
>ASNB_BACSU (P54420) Asparagine synthetase [glutamine-hydrolyzing] 1 (EC| 6.3.5.4) Length = 632 Score = 28.9 bits (63), Expect = 9.7 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = +2 Query: 341 VPVHRLRRRLFGLLVPVEHLA--DVLDGVTELLLEHSLDAHVH 463 VP H L R+ G VP+ H ++ + V ++ E DA++H Sbjct: 535 VPEHVLNRKKLGFPVPIRHWLKNEMNEWVRNIIQESQTDAYIH 577
>CHEA_BACSU (P29072) Chemotaxis protein cheA (EC 2.7.13.3)| Length = 671 Score = 28.9 bits (63), Expect = 9.7 Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 6/75 (8%) Frame = -2 Query: 451 IERVLKEKFGDAIKDIRQVFDGDQQPEETTPKAVNR------HLDILRPAIANYGGSVEV 290 +ERV+ EK + ++D Q+++ P +T ++ LD+++ + + GGSV V Sbjct: 463 LERVITEKEAETLED-NQIYELIFAPGFSTADQISDISGRGVGLDVVKNKLESLGGSVSV 521 Query: 289 LAVDGEDCLVKYDGP 245 + +G+ L P Sbjct: 522 KSAEGQGSLFSIQLP 536
>TR4_RAT (P55094) Orphan nuclear receptor TR4| Length = 596 Score = 28.9 bits (63), Expect = 9.7 Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 18/96 (18%) Frame = -2 Query: 385 DQQPEETTPKAVNRHLDILRPAI----------------ANYGGSVEVLAVDGEDCLVKY 254 + QPE+ + + R D L A+ A+ GGS+ V++ D +++ Sbjct: 298 EMQPEDQSASEITRAFDTLAKALNTTDSASPPSLADGIDASGGGSIHVISRDQSTPIIEV 357 Query: 253 DGPESIGSGV--KAAIKEKFPDITNVVFTQ*STGRL 152 +GP + V K + P+ NV + S RL Sbjct: 358 EGPLLSDTHVTFKLTMPSPMPEYLNVHYICESASRL 393
>TR4_MOUSE (P49117) Orphan nuclear receptor TR4 (Orphan nuclear receptor TAK1)| Length = 596 Score = 28.9 bits (63), Expect = 9.7 Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 18/96 (18%) Frame = -2 Query: 385 DQQPEETTPKAVNRHLDILRPAI----------------ANYGGSVEVLAVDGEDCLVKY 254 + QPE+ + + R D L A+ A+ GGS+ V++ D +++ Sbjct: 298 EMQPEDQSASEITRAFDTLAKALNTTDSASPPSLADGIDASGGGSIHVISRDQSTPIIEV 357 Query: 253 DGPESIGSGV--KAAIKEKFPDITNVVFTQ*STGRL 152 +GP + V K + P+ NV + S RL Sbjct: 358 EGPLLSDTHVTFKLTMPSPMPEYLNVHYICESASRL 393 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,987,461 Number of Sequences: 219361 Number of extensions: 1736232 Number of successful extensions: 5275 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 5085 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5270 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4315578075 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)