Clone Name | rbasd21h24 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | MTCD_TETTH (Q8WSW3) Cadmium metallothionein precursor (MT-Cd) (C... | 28 | 5.5 | 2 | NICE1_HUMAN (Q9UGL9) Protein NICE-1 | 28 | 9.4 |
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>MTCD_TETTH (Q8WSW3) Cadmium metallothionein precursor (MT-Cd) (Cd-MT)| Length = 162 Score = 28.5 bits (62), Expect = 5.5 Identities = 10/27 (37%), Positives = 15/27 (55%) Frame = -1 Query: 103 PSVGCCASARSWSCCFSRTXRCXASPG 23 P+ GCC +++ +CC S T C G Sbjct: 76 PNSGCCCVSKTNNCCKSDTKECCTGTG 102 Score = 28.5 bits (62), Expect = 5.5 Identities = 10/27 (37%), Positives = 15/27 (55%) Frame = -1 Query: 103 PSVGCCASARSWSCCFSRTXRCXASPG 23 P+ GCC +++ +CC S T C G Sbjct: 20 PNSGCCCVSKTDNCCKSDTKECCTGTG 46
>NICE1_HUMAN (Q9UGL9) Protein NICE-1| Length = 99 Score = 27.7 bits (60), Expect = 9.4 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = -1 Query: 94 GCCASARSWSCCFSRTXRCXASPG 23 GCC S+ + CCF R R S G Sbjct: 51 GCCGSSSTSCCCFPRRRRRQRSSG 74 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.119 0.322 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,742,985 Number of Sequences: 219361 Number of extensions: 86915 Number of successful extensions: 252 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 222 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 251 length of database: 80,573,946 effective HSP length: 11 effective length of database: 78,160,975 effective search space used: 1875863400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)