ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd21h14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PFL_CLOPA (Q46266) Formate acetyltransferase (EC 2.3.1.54) (Pyru... 30 3.7

>PFL_CLOPA (Q46266) Formate acetyltransferase (EC 2.3.1.54) (Pyruvate|
           formate-lyase)
          Length = 740

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
 Frame = +2

Query: 20  AYVYVAGRSIIILGPTVCLHVRVYNILLPYTNRKTLWWPYVPQSEKEHC--I*SIDDDLQ 193
           A V + GRS++       LH  +     P  N   LW   +P+S K+ C  +  + D +Q
Sbjct: 327 AGVGIDGRSLVTKNSFRYLHTLINLGSAPEPNMTVLWSENLPESFKKFCAEMSILTDSIQ 386

Query: 194 YQN 202
           Y+N
Sbjct: 387 YEN 389


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,288,846
Number of Sequences: 219361
Number of extensions: 1020513
Number of successful extensions: 2754
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2754
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3696665728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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