ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd21h14 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009303.1| Triticum aestivum clone wlm1.pk0014.g10:fis, full insert mRNA sequence Length = 813 Score = 323 bits (163), Expect = 3e-85 Identities = 184/191 (96%) Strand = Plus / Minus Query: 316 gactacgcggcggagggcgccgggaaggacttgacggcgacgacctcggcgagggcagca 375 |||||||| || || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 492 gactacgcagctgatggcgccgggaaggacttgacggcgacgacctcggcgagggcagca 433 Query: 376 cgcagcgggtcggtggcctcgtcggcggcaggcttgtagttgaggccctcgtcgtcgtag 435 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 432 cgcagcgggtcggcggcctcgtcggcggcaggcttgtagttgaggctctcgtcgtcgtag 373 Query: 436 atggcccaccatttcttcaccagcatcttgatgtcgtccctgtccatgttggcctcctcg 495 ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 atggcccaccacttcttgaccagcatcttgatgtcgtccctgtccatgttggcctcctcg 313 Query: 496 ccggtgtacct 506 ||||||||||| Sbjct: 312 ccggtgtacct 302 Score = 87.7 bits (44), Expect = 3e-14 Identities = 83/95 (87%), Gaps = 7/95 (7%) Strand = Plus / Minus Query: 142 acctcaatcggaaaaagaacactgtatatgatcgattgatgatgatctacaataccaaaa 201 ||||||||| |||| |||||||||||||||||||||||| |||||||||||||| Sbjct: 647 acctcaatcaaaaaaggaacactgtatatgatcgattgat------ctacaataccaaaa 594 Query: 202 cgtgtagatgctaaatcgacgacga-tattacgta 235 |||| |||| ||||||||||||||| ||||||||| Sbjct: 593 cgtgcagatactaaatcgacgacgagtattacgta 559
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 425 cgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccatgt 484 |||||| ||||| | ||||||| ||||| ||||||||||||||||| ||||||||||||| Sbjct: 11341613 cgtcgttgtagacgtcccaccacttcttgaccagcatcttgatgtcctccctgtccatgt 11341554 Query: 485 tggcctcctcgccggtgtacct 506 | ||||||| ||| |||||||| Sbjct: 11341553 tcgcctccttgcccgtgtacct 11341532 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 cgggaaggacttgacggcgacgac 359 ||||||||||||| |||||||||| Sbjct: 16494979 cgggaaggacttggcggcgacgac 16495002 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 cggcggagggcgccgggaag 342 |||||||||||||||||||| Sbjct: 82795 cggcggagggcgccgggaag 82814
>gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0085H08, from chromosome 3, complete sequence Length = 130656 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 425 cgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccatgt 484 |||||| ||||| | ||||||| ||||| ||||||||||||||||| ||||||||||||| Sbjct: 120566 cgtcgttgtagacgtcccaccacttcttgaccagcatcttgatgtcctccctgtccatgt 120507 Query: 485 tggcctcctcgccggtgtacct 506 | ||||||| ||| |||||||| Sbjct: 120506 tcgcctccttgcccgtgtacct 120485
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 425 cgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccatgt 484 |||||| ||||| | ||||||| ||||| ||||||||||||||||| ||||||||||||| Sbjct: 11338376 cgtcgttgtagacgtcccaccacttcttgaccagcatcttgatgtcctccctgtccatgt 11338317 Query: 485 tggcctcctcgccggtgtacct 506 | ||||||| ||| |||||||| Sbjct: 11338316 tcgcctccttgcccgtgtacct 11338295 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 cgggaaggacttgacggcgacgac 359 ||||||||||||| |||||||||| Sbjct: 16488612 cgggaaggacttggcggcgacgac 16488635 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 cggcggagggcgccgggaag 342 |||||||||||||||||||| Sbjct: 82795 cggcggagggcgccgggaag 82814
>gb|AC134230.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0005J15, complete sequence Length = 159270 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 425 cgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccatgt 484 |||||| ||||| | ||||||| ||||| ||||||||||||||||| ||||||||||||| Sbjct: 49910 cgtcgttgtagacgtcccaccacttcttgaccagcatcttgatgtcctccctgtccatgt 49851 Query: 485 tggcctcctcgccggtgtacct 506 | ||||||| ||| |||||||| Sbjct: 49850 tcgcctccttgcccgtgtacct 49829
>dbj|AK103958.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-C01, full insert sequence Length = 1315 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 425 cgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccatgt 484 |||||| ||||| | ||||||| ||||| ||||||||||||||||| ||||||||||||| Sbjct: 994 cgtcgttgtagacgtcccaccacttcttgaccagcatcttgatgtcctccctgtccatgt 935 Query: 485 tggcctcctcgccggtgtacct 506 | ||||||| ||| |||||||| Sbjct: 934 tcgcctccttgcccgtgtacct 913
>dbj|AK071812.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113D08, full insert sequence Length = 1404 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 425 cgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccatgt 484 |||||| ||||| | ||||||| ||||| ||||||||||||||||| ||||||||||||| Sbjct: 1002 cgtcgttgtagacgtcccaccacttcttgaccagcatcttgatgtcctccctgtccatgt 943 Query: 485 tggcctcctcgccggtgtacct 506 | ||||||| ||| |||||||| Sbjct: 942 tcgcctccttgcccgtgtacct 921
>gb|AF497507.1| Zea mays galactinol synthase 1 mRNA, complete cds Length = 1483 Score = 87.7 bits (44), Expect = 3e-14 Identities = 74/84 (88%) Strand = Plus / Minus Query: 423 ctcgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccat 482 |||||||| ||||||| ||||||| || ||||||||| ||||||||| ||||||||||| Sbjct: 1011 ctcgtcgttgtagatgtcccaccacttgttcaccagcgacttgatgtcctccctgtccat 952 Query: 483 gttggcctcctcgccggtgtacct 506 ||||||||||| ||| ||| |||| Sbjct: 951 gttggcctccttgcccgtgaacct 928
>ref|NM_185505.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1406 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 318 ctacgcggcggagggcgccgggaaggacttgacggcgacgacctcggcgagggcagcacg 377 ||||||||||||||||||||||||| ||||||||||| || |||||||||| || | || Sbjct: 1091 ctacgcggcggagggcgccgggaagtacttgacggcgccggcctcggcgagcgccgtccg 1032 Query: 378 cagcgggtcggtggcctcgtcggcg 402 || ||| | | |||||||||||||| Sbjct: 1031 catcggctggctggcctcgtcggcg 1007 Score = 69.9 bits (35), Expect = 8e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 408 cttgtagttgaggccctcgtcgtcgtagatggcccaccatttcttcaccagcatcttgat 467 |||||||| ||||| |||||||| ||||||| ||||||| |||||||||||||||| || Sbjct: 992 cttgtagtcgaggctctcgtcgttgtagatgtcccaccacctcttcaccagcatctttat 933 Query: 468 gtcgtccctgtccatgttggcctcctcgccggtgtacct 506 || || |||| |||||| |||||| |||||| |||| Sbjct: 932 atcttctctgttcatgttctcctccttcccggtgaacct 894
>ref|XM_506583.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1165_F02.103 mRNA Length = 1407 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 318 ctacgcggcggagggcgccgggaaggacttgacggcgacgacctcggcgagggcagcacg 377 ||||||||||||||||||||||||| ||||||||||| || |||||||||| || | || Sbjct: 1090 ctacgcggcggagggcgccgggaagtacttgacggcgccggcctcggcgagcgccgtccg 1031 Query: 378 cagcgggtcggtggcctcgtcggcg 402 || ||| | | |||||||||||||| Sbjct: 1030 catcggctggctggcctcgtcggcg 1006 Score = 69.9 bits (35), Expect = 8e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 408 cttgtagttgaggccctcgtcgtcgtagatggcccaccatttcttcaccagcatcttgat 467 |||||||| ||||| |||||||| ||||||| ||||||| |||||||||||||||| || Sbjct: 991 cttgtagtcgaggctctcgtcgttgtagatgtcccaccacctcttcaccagcatctttat 932 Query: 468 gtcgtccctgtccatgttggcctcctcgccggtgtacct 506 || || |||| |||||| |||||| |||||| |||| Sbjct: 931 atcttctctgttcatgttctcctccttcccggtgaacct 893
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 318 ctacgcggcggagggcgccgggaaggacttgacggcgacgacctcggcgagggcagcacg 377 ||||||||||||||||||||||||| ||||||||||| || |||||||||| || | || Sbjct: 29167078 ctacgcggcggagggcgccgggaagtacttgacggcgccggcctcggcgagcgccgtccg 29167137 Query: 378 cagcgggtcggtggcctcgtcggcg 402 || ||| | | |||||||||||||| Sbjct: 29167138 catcggctggctggcctcgtcggcg 29167162 Score = 69.9 bits (35), Expect = 8e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 408 cttgtagttgaggccctcgtcgtcgtagatggcccaccatttcttcaccagcatcttgat 467 |||||||| ||||| |||||||| ||||||| ||||||| |||||||||||||||| || Sbjct: 29167177 cttgtagtcgaggctctcgtcgttgtagatgtcccaccacctcttcaccagcatctttat 29167236 Query: 468 gtcgtccctgtccatgttggcctcctcgccggtgtacct 506 || || |||| |||||| |||||| |||||| |||| Sbjct: 29167237 atcttctctgttcatgttctcctccttcccggtgaacct 29167275
>dbj|AP003816.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1165_F02 Length = 125993 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 318 ctacgcggcggagggcgccgggaaggacttgacggcgacgacctcggcgagggcagcacg 377 ||||||||||||||||||||||||| ||||||||||| || |||||||||| || | || Sbjct: 7152 ctacgcggcggagggcgccgggaagtacttgacggcgccggcctcggcgagcgccgtccg 7211 Query: 378 cagcgggtcggtggcctcgtcggcg 402 || ||| | | |||||||||||||| Sbjct: 7212 catcggctggctggcctcgtcggcg 7236 Score = 69.9 bits (35), Expect = 8e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 408 cttgtagttgaggccctcgtcgtcgtagatggcccaccatttcttcaccagcatcttgat 467 |||||||| ||||| |||||||| ||||||| ||||||| |||||||||||||||| || Sbjct: 7251 cttgtagtcgaggctctcgtcgttgtagatgtcccaccacctcttcaccagcatctttat 7310 Query: 468 gtcgtccctgtccatgttggcctcctcgccggtgtacct 506 || || |||| |||||| |||||| |||||| |||| Sbjct: 7311 atcttctctgttcatgttctcctccttcccggtgaacct 7349
>dbj|AP003813.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1150_E04 Length = 130973 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 318 ctacgcggcggagggcgccgggaaggacttgacggcgacgacctcggcgagggcagcacg 377 ||||||||||||||||||||||||| ||||||||||| || |||||||||| || | || Sbjct: 102196 ctacgcggcggagggcgccgggaagtacttgacggcgccggcctcggcgagcgccgtccg 102255 Query: 378 cagcgggtcggtggcctcgtcggcg 402 || ||| | | |||||||||||||| Sbjct: 102256 catcggctggctggcctcgtcggcg 102280 Score = 69.9 bits (35), Expect = 8e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 408 cttgtagttgaggccctcgtcgtcgtagatggcccaccatttcttcaccagcatcttgat 467 |||||||| ||||| |||||||| ||||||| ||||||| |||||||||||||||| || Sbjct: 102295 cttgtagtcgaggctctcgtcgttgtagatgtcccaccacctcttcaccagcatctttat 102354 Query: 468 gtcgtccctgtccatgttggcctcctcgccggtgtacct 506 || || |||| |||||| |||||| |||||| |||| Sbjct: 102355 atcttctctgttcatgttctcctccttcccggtgaacct 102393
>dbj|AK107065.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-E05, full insert sequence Length = 1407 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 318 ctacgcggcggagggcgccgggaaggacttgacggcgacgacctcggcgagggcagcacg 377 ||||||||||||||||||||||||| ||||||||||| || |||||||||| || | || Sbjct: 1090 ctacgcggcggagggcgccgggaagtacttgacggcgccggcctcggcgagcgccgtccg 1031 Query: 378 cagcgggtcggtggcctcgtcggcg 402 || ||| | | |||||||||||||| Sbjct: 1030 catcggctggctggcctcgtcggcg 1006 Score = 69.9 bits (35), Expect = 8e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 408 cttgtagttgaggccctcgtcgtcgtagatggcccaccatttcttcaccagcatcttgat 467 |||||||| ||||| |||||||| ||||||| ||||||| |||||||||||||||| || Sbjct: 991 cttgtagtcgaggctctcgtcgttgtagatgtcccaccacctcttcaccagcatctttat 932 Query: 468 gtcgtccctgtccatgttggcctcctcgccggtgtacct 506 || || |||| |||||| |||||| |||||| |||| Sbjct: 931 atcttctctgttcatgttctcctccttcccggtgaacct 893
>dbj|AK099548.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013033D21, full insert sequence Length = 1406 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 318 ctacgcggcggagggcgccgggaaggacttgacggcgacgacctcggcgagggcagcacg 377 ||||||||||||||||||||||||| ||||||||||| || |||||||||| || | || Sbjct: 1091 ctacgcggcggagggcgccgggaagtacttgacggcgccggcctcggcgagcgccgtccg 1032 Query: 378 cagcgggtcggtggcctcgtcggcg 402 || ||| | | |||||||||||||| Sbjct: 1031 catcggctggctggcctcgtcggcg 1007 Score = 69.9 bits (35), Expect = 8e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 408 cttgtagttgaggccctcgtcgtcgtagatggcccaccatttcttcaccagcatcttgat 467 |||||||| ||||| |||||||| ||||||| ||||||| |||||||||||||||| || Sbjct: 992 cttgtagtcgaggctctcgtcgttgtagatgtcccaccacctcttcaccagcatctttat 933 Query: 468 gtcgtccctgtccatgttggcctcctcgccggtgtacct 506 || || |||| |||||| |||||| |||||| |||| Sbjct: 932 atcttctctgttcatgttctcctccttcccggtgaacct 894
>dbj|D26537.1|RICWSI76 Oryza sativa (japonica cultivar-group) mRNA for WSI76 protein induced by water stress, complete cds Length = 1350 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 318 ctacgcggcggagggcgccgggaaggacttgacggcgacgacctcggcgagggcagcacg 377 ||||||||||||||||||||||||| ||||||||||| || |||||||||| || | || Sbjct: 1045 ctacgcggcggagggcgccgggaagtacttgacggcgccggcctcggcgagcgccgtccg 986 Query: 378 cagcgggtcggtggcctcgtcggcg 402 || ||| | | |||||||||||||| Sbjct: 985 catcggctggctggcctcgtcggcg 961 Score = 69.9 bits (35), Expect = 8e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 408 cttgtagttgaggccctcgtcgtcgtagatggcccaccatttcttcaccagcatcttgat 467 |||||||| ||||| |||||||| ||||||| ||||||| |||||||||||||||| || Sbjct: 946 cttgtagtcgaggctctcgtcgttgtagatgtcccaccacctcttcaccagcatctttat 887 Query: 468 gtcgtccctgtccatgttggcctcctcgccggtgtacct 506 || || |||| |||||| |||||| |||||| |||| Sbjct: 886 atcttctctgttcatgttctcctccttcccggtgaacct 848
>gb|AF497508.1| Zea mays galactinol synthase 2 mRNA, complete cds Length = 1481 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 423 ctcgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccat 482 |||||||| ||||||| ||||||| ||||||||||| |||||||| ||||||||||| Sbjct: 1019 ctcgtcgttgtagatgtcccaccacttcttcaccagggcgttgatgtcctccctgtccat 960 Query: 483 gttggcctcctcgccggtgtacct 506 ||| ||||||| ||| ||| |||| Sbjct: 959 gttcgcctccttgcccgtgaacct 936
>gb|AY570974.1| Xerophyta humilis clone HC181 galactinol synthase mRNA, partial cds Length = 751 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 424 tcgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccatg 483 |||||||||||||| |||||||||||||||||| | |||| ||||| || ||||||||| Sbjct: 318 tcgtcgtcgtagatctcccaccatttcttcaccaacctcttaatgtcttctctgtccatg 259 Query: 484 tt 485 || Sbjct: 258 tt 257 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 424 tcgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccatg 483 ||||||||||| || |||||||||||||||||| | |||| ||||| || ||||||||| Sbjct: 453 tcgtcgtcgtaaatctcccaccatttcttcaccaacctcttaatgtcttctctgtccatg 394 Query: 484 tt 485 || Sbjct: 393 tt 392
>gb|AY077642.1| Cucumis melo galactinol synthase (GAS1) gene, complete cds Length = 1903 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 440 cccaccatttcttcaccagcatcttgatgtcgtccctgtccatgtt 485 |||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 1625 cccaccatttcttcaccagcatttttatgtcttccctgtccatgtt 1580
>gb|AY192144.1| Zea mays galactinol synthase 3 (gols3) gene, complete cds Length = 1492 Score = 63.9 bits (32), Expect = 5e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 423 ctcgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccat 482 |||||||| ||||||| ||||||| || |||||||| |||||||| ||||||||||| Sbjct: 1202 ctcgtcgttgtagatgtcccaccacttgttcaccagggcgttgatgtcctccctgtccat 1143 Query: 483 gttggcctcctcgccggtgtacct 506 ||| ||||||| ||| ||| |||| Sbjct: 1142 gttcgcctccttgcccgtgaacct 1119
>gb|AF497509.1| Zea mays galactinol synthase 3 mRNA, complete cds Length = 1487 Score = 63.9 bits (32), Expect = 5e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 423 ctcgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccat 482 |||||||| ||||||| ||||||| || |||||||| |||||||| ||||||||||| Sbjct: 1028 ctcgtcgttgtagatgtcccaccacttgttcaccagggcgttgatgtcctccctgtccat 969 Query: 483 gttggcctcctcgccggtgtacct 506 ||| ||||||| ||| ||| |||| Sbjct: 968 gttcgcctccttgcccgtgaacct 945
>gb|AY106399.1| Zea mays PCO107484 mRNA sequence Length = 928 Score = 63.9 bits (32), Expect = 5e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 423 ctcgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccat 482 |||||||| ||||||| ||||||| || |||||||| |||||||| ||||||||||| Sbjct: 459 ctcgtcgttgtagatgtcccaccacttgttcaccagggcgttgatgtcctccctgtccat 400 Query: 483 gttggcctcctcgccggtgtacct 506 ||| ||||||| ||| ||| |||| Sbjct: 399 gttcgcctccttgcccgtgaacct 376
>ref|NM_104537.2| Arabidopsis thaliana transferase, transferring glycosyl groups / transferase, transferring hexosyl groups AT1G56600 mRNA, complete cds Length = 1396 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 423 ctcgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccat 482 |||||| | ||| ||| ||||||||||||| ||||||||||| ||||| || |||||||| Sbjct: 965 ctcgtcattgtaaatgtcccaccatttcttgaccagcatcttaatgtcttctctgtccat 906 Query: 483 gtt 485 ||| Sbjct: 905 gtt 903
>gb|AY058238.1| Arabidopsis thaliana At1g56600/F25P12_16 mRNA, complete cds Length = 1008 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 423 ctcgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccat 482 |||||| | ||| ||| ||||||||||||| ||||||||||| ||||| || |||||||| Sbjct: 882 ctcgtcattgtaaatgtcccaccatttcttgaccagcatcttaatgtcttctctgtccat 823 Query: 483 gtt 485 ||| Sbjct: 822 gtt 820
>gb|AF412094.1|AF412094 Arabidopsis thaliana At1g56600/F25P12_16 mRNA, complete cds Length = 956 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 423 ctcgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccat 482 |||||| | ||| ||| ||||||||||||| ||||||||||| ||||| || |||||||| Sbjct: 540 ctcgtcattgtaaatgtcccaccatttcttgaccagcatcttaatgtcttctctgtccat 481 Query: 483 gtt 485 ||| Sbjct: 480 gtt 478
>gb|AY050410.1| Arabidopsis thaliana At1g56600/F25P12_16 mRNA, complete cds Length = 1380 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 423 ctcgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccat 482 |||||| | ||| ||| ||||||||||||| ||||||||||| ||||| || |||||||| Sbjct: 965 ctcgtcattgtaaatgtcccaccatttcttgaccagcatcttaatgtcttctctgtccat 906 Query: 483 gtt 485 ||| Sbjct: 905 gtt 903
>gb|AC009323.4|AC009323 Arabidopsis thaliana chromosome I BAC F25P12 genomic sequence, complete sequence Length = 141748 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 423 ctcgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccat 482 |||||| | ||| ||| ||||||||||||| ||||||||||| ||||| || |||||||| Sbjct: 108180 ctcgtcattgtaaatgtcccaccatttcttgaccagcatcttaatgtcttctctgtccat 108239 Query: 483 gtt 485 ||| Sbjct: 108240 gtt 108242
>dbj|AB062849.1| Arabidopsis thaliana AtGolS2 mRNA for galactinol synthase, complete cds Length = 1375 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 423 ctcgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccat 482 |||||| | ||| ||| ||||||||||||| ||||||||||| ||||| || |||||||| Sbjct: 961 ctcgtcattgtaaatgtcccaccatttcttgaccagcatcttaatgtcttctctgtccat 902 Query: 483 gtt 485 ||| Sbjct: 901 gtt 899
>gb|AY237112.1| Cucumis sativus galactinol synthase (GolS) mRNA, complete cds Length = 1404 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 440 cccaccatttcttcaccagcatcttgatgtcgtccctgtccatgtt 485 |||||||||||||||||||||| || ||||| ||||| |||||||| Sbjct: 886 cccaccatttcttcaccagcatttttatgtcttccctctccatgtt 841
>dbj|AP006378.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT44A10, TM0223, complete sequence Length = 101752 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 440 cccaccatttcttcaccagcatcttgatgtcgtccctgtccatgtt 485 |||||||||||||||| |||||||||||||| | ||||||||||| Sbjct: 32725 cccaccatttcttcacaagcatcttgatgtcttttctgtccatgtt 32770
>emb|AJ237693.1|ARE237693 Ajuga reptans mRNA for galactinol synthase, isoform GolS-1 Length = 1230 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 440 cccaccatttcttcaccagcatcttgatgtcgtccctgtccatgttggc 488 ||||||||||||| || ||||| |||||||| || |||||||||||||| Sbjct: 865 cccaccatttctttacgagcattttgatgtcttctctgtccatgttggc 817
>ref|NM_100805.1| Arabidopsis thaliana transferase, transferring glycosyl groups / transferase, transferring hexosyl groups AT1G09350 mRNA, complete cds Length = 1301 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 423 ctcgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccat 482 |||||||| ||| ||| |||||||||||| || |||||||||||||| ||||| ||||| Sbjct: 933 ctcgtcgttgtaaatgtcccaccatttctctacaagcatcttgatgtcttccctctccat 874
>gb|AC003970.1| Arabidopsis thaliana chromosome I BAC F14J9 genomic sequence contains phyA marker, complete sequence Length = 95865 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 423 ctcgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccat 482 |||||||| ||| ||| |||||||||||| || |||||||||||||| ||||| ||||| Sbjct: 2676 ctcgtcgttgtaaatgtcccaccatttctctacaagcatcttgatgtcttccctctccat 2617
>gb|AY081452.1| Arabidopsis thaliana similar to rice water stress induced protein (At1g09350) mRNA, complete cds Length = 1161 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 423 ctcgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccat 482 |||||||| ||| ||| |||||||||||| || |||||||||||||| ||||| ||||| Sbjct: 864 ctcgtcgttgtaaatgtcccaccatttctctacaagcatcttgatgtcttccctctccat 805
>gb|AF370546.1|AF370546 Arabidopsis thaliana water stress induced protein-like protein (F14J9.1) mRNA, complete cds Length = 1302 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 423 ctcgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccat 482 |||||||| ||| ||| |||||||||||| || |||||||||||||| ||||| ||||| Sbjct: 933 ctcgtcgttgtaaatgtcccaccatttctctacaagcatcttgatgtcttccctctccat 874
>emb|BX813537.1|CNS0AAMU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB22ZH01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1250 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 423 ctcgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccat 482 |||||||| ||| ||| |||||||||||| || |||||||||||||| ||||| ||||| Sbjct: 920 ctcgtcgttgtaaatgtcccaccatttctctacaagcatcttgatgtcttccctctccat 861
>gb|AY126718.1| Fagopyrum esculentum fagopyritol synthase 1 mRNA, complete cds Length = 1269 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 423 ctcgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccat 482 |||||||| |||||| |||||||||| ||||| |||| |||||||| || |||||||| Sbjct: 970 ctcgtcgttgtagatatcccaccattttttcacaagcaatttgatgtcttctctgtccat 911 Query: 483 gttggcctcctcgccggtgtacct 506 ||| | |||| ||| |||||||| Sbjct: 910 gttctcttccttgcccgtgtacct 887
>dbj|AB062850.1| Arabidopsis thaliana AtGolS3 mRNA for galactinol synthase, complete cds Length = 1301 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 423 ctcgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccat 482 |||||||| ||| ||| |||||||||||| || |||||||||||||| ||||| ||||| Sbjct: 933 ctcgtcgttgtaaatgtcccaccatttctctacaagcatcttgatgtcttccctctccat 874
>emb|BX324121.9| Zebrafish DNA sequence from clone DKEY-164J20 in linkage group 25, complete sequence Length = 181165 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Plus Query: 244 gaaatctttcctacgtattactagtatttatt 275 ||||| ||||||||| |||||||||||||||| Sbjct: 39314 gaaatgtttcctacgaattactagtatttatt 39345
>gb|AY077641.1| Cucumis melo galactinol synthase (GAS2) gene, complete cds Length = 2014 Score = 48.1 bits (24), Expect = 0.028 Identities = 51/60 (85%) Strand = Plus / Minus Query: 426 gtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccatgtt 485 ||||| ||| ||| |||||||||| ||||| ||||||||||||||| || |||||||| Sbjct: 1567 gtcgttgtaaatgtcccaccattttgacaccaacatcttgatgtcgtctctttccatgtt 1508
>gb|AY126717.1| Fagopyrum esculentum fagopyritol synthase 3 mRNA, partial cds Length = 986 Score = 48.1 bits (24), Expect = 0.028 Identities = 48/56 (85%) Strand = Plus / Minus Query: 430 tcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccatgtt 485 |||||||| ||||||| |||||||| |||||| | | ||| |||||||||||||| Sbjct: 596 tcgtagatctcccaccacttcttcactagcatcctaacgtcttccctgtccatgtt 541
>emb|AL953857.7| Zebrafish DNA sequence from clone CH211-127M7, complete sequence Length = 175586 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Plus Query: 244 gaaatctttcctacgtattactagtatttatt 275 ||||| ||||||||| |||||||||||||||| Sbjct: 66328 gaaatgtttcctacgaattactagtatttatt 66359
>gb|AY126615.1| Medicago sativa galactinol synthase (corF) mRNA, complete cds Length = 1326 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 440 cccaccatttcttcaccagcatcttgatgtc 470 |||||||||||||||||| |||||| ||||| Sbjct: 907 cccaccatttcttcaccaacatctttatgtc 877
>ref|NM_130286.2| Arabidopsis thaliana transferase, transferring hexosyl groups AT2G47180 mRNA, complete cds Length = 1355 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Minus Query: 424 tcgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccatg 483 ||||||||||| ||| |||||||||| ||||| | ||| || || || ||||| |||||| Sbjct: 974 tcgtcgtcgtaaatgtcccaccattttttcactaacatttttatatcttccctctccatg 915 Query: 484 tt 485 || Sbjct: 914 tt 913
>gb|AY091426.1| Arabidopsis thaliana putative galactinol synthase (At2g47180) mRNA, complete cds Length = 1066 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Minus Query: 424 tcgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccatg 483 ||||||||||| ||| |||||||||| ||||| | ||| || || || ||||| |||||| Sbjct: 905 tcgtcgtcgtaaatgtcccaccattttttcactaacatttttatatcttccctctccatg 846 Query: 484 tt 485 || Sbjct: 845 tt 844
>gb|AY056139.1| Arabidopsis thaliana putative galactinol synthase (At2g47180) mRNA, complete cds Length = 1367 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Minus Query: 424 tcgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccatg 483 ||||||||||| ||| |||||||||| ||||| | ||| || || || ||||| |||||| Sbjct: 970 tcgtcgtcgtaaatgtcccaccattttttcactaacatttttatatcttccctctccatg 911 Query: 484 tt 485 || Sbjct: 910 tt 909
>gb|AC007236.5| Arabidopsis thaliana chromosome 2 clone T3D7 map mi79a, complete sequence Length = 16031 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Minus Query: 424 tcgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccatg 483 ||||||||||| ||| |||||||||| ||||| | ||| || || || ||||| |||||| Sbjct: 1923 tcgtcgtcgtaaatgtcccaccattttttcactaacatttttatatcttccctctccatg 1864 Query: 484 tt 485 || Sbjct: 1863 tt 1862
>gb|AC002337.3| Arabidopsis thaliana chromosome 2 clone T8I13 map CIC06C03, complete sequence Length = 88068 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Plus Query: 424 tcgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccatg 483 ||||||||||| ||| |||||||||| ||||| | ||| || || || ||||| |||||| Sbjct: 3455 tcgtcgtcgtaaatgtcccaccattttttcactaacatttttatatcttccctctccatg 3514 Query: 484 tt 485 || Sbjct: 3515 tt 3516
>gb|AY085006.1| Arabidopsis thaliana clone 124236 mRNA, complete sequence Length = 1330 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Minus Query: 424 tcgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccatg 483 ||||||||||| ||| |||||||||| ||||| | ||| || || || ||||| |||||| Sbjct: 971 tcgtcgtcgtaaatgtcccaccattttttcactaacatttttatatcttccctctccatg 912 Query: 484 tt 485 || Sbjct: 911 tt 910
>gb|AY126716.1| Fagopyrum esculentum fagopyritol synthase 2 mRNA, complete cds Length = 1326 Score = 44.1 bits (22), Expect = 0.44 Identities = 40/46 (86%) Strand = Plus / Minus Query: 440 cccaccatttcttcaccagcatcttgatgtcgtccctgtccatgtt 485 ||||||| |||||||| |||||| | | ||| |||||||||||||| Sbjct: 925 cccaccacttcttcactagcatcctaacgtcttccctgtccatgtt 880
>dbj|AB062848.1| Arabidopsis thaliana AtGolS1 mRNA for galactinol synthase, complete cds Length = 1333 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Minus Query: 424 tcgtcgtcgtagatggcccaccatttcttcaccagcatcttgatgtcgtccctgtccatg 483 ||||||||||| ||| |||||||||| ||||| | ||| || || || ||||| |||||| Sbjct: 974 tcgtcgtcgtaaatgtcccaccattttttcactaacatttttatatcttccctctccatg 915 Query: 484 tt 485 || Sbjct: 914 tt 913
>gb|DQ192157.1| Streptomyces albidoflavus isolate S151 TrpB (trpB) gene, partial cds Length = 454 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 342 ggacttgacggcgacgacctcggcg 366 |||||| |||||||||||||||||| Sbjct: 220 ggacttcacggcgacgacctcggcg 196
>gb|DQ192153.1| Streptomyces exfoliatus isolate S272 TrpB (trpB) gene, partial cds Length = 454 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 342 ggacttgacggcgacgacctcggcg 366 |||||| |||||||||||||||||| Sbjct: 220 ggacttcacggcgacgacctcggcg 196
>gb|DQ192151.1| Streptomyces exfoliatus isolate GRE18 TrpB (trpB) gene, partial cds Length = 454 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 342 ggacttgacggcgacgacctcggcg 366 |||||| |||||||||||||||||| Sbjct: 220 ggacttcacggcgacgacctcggcg 196
>gb|DQ192149.1| Streptomyces exfoliatus isolate REA75 TrpB (trpB) gene, partial cds Length = 454 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 342 ggacttgacggcgacgacctcggcg 366 |||||| |||||||||||||||||| Sbjct: 220 ggacttcacggcgacgacctcggcg 196
>gb|DQ192148.1| Streptomyces exfoliatus isolate D111 TrpB (trpB) gene, partial cds Length = 455 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 342 ggacttgacggcgacgacctcggcg 366 |||||| |||||||||||||||||| Sbjct: 221 ggacttcacggcgacgacctcggcg 197
>gb|DQ192143.1| Streptomyces albidoflavus isolate D116 TrpB (trpB) gene, partial cds Length = 454 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 342 ggacttgacggcgacgacctcggcg 366 |||||| |||||||||||||||||| Sbjct: 220 ggacttcacggcgacgacctcggcg 196
>gb|DQ192142.1| Streptomyces albidoflavus isolate AMO70 TrpB (trpB) gene, partial cds Length = 454 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 342 ggacttgacggcgacgacctcggcg 366 |||||| |||||||||||||||||| Sbjct: 220 ggacttcacggcgacgacctcggcg 196
>gb|DQ192141.1| Streptomyces albidoflavus isolate D316 TrpB (trpB) gene, partial cds Length = 454 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 342 ggacttgacggcgacgacctcggcg 366 |||||| |||||||||||||||||| Sbjct: 220 ggacttcacggcgacgacctcggcg 196
>gb|DQ192139.1| Streptomyces cyaneus isolate D110 TrpB (trpB) gene, partial cds Length = 454 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 342 ggacttgacggcgacgacctcggcg 366 |||||| |||||||||||||||||| Sbjct: 220 ggacttcacggcgacgacctcggcg 196
>gb|AC132875.8| Mus musculus chromosome 15, clone RP24-381O23, complete sequence Length = 185786 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 aaaaagaacactgtatatgat 173 ||||||||||||||||||||| Sbjct: 115434 aaaaagaacactgtatatgat 115454
>gb|AC165415.5| Mus musculus chromosome 15, clone RP23-17G19, complete sequence Length = 227254 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 aaaaagaacactgtatatgat 173 ||||||||||||||||||||| Sbjct: 24655 aaaaagaacactgtatatgat 24635
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 cttgacggcgacgacctcggc 365 ||||||||||||||||||||| Sbjct: 3350038 cttgacggcgacgacctcggc 3350058
>emb|AJ237694.1|ARE237694 Ajuga reptans mRNA for galactinol synthase, isoform GolS-2, partial Length = 908 Score = 42.1 bits (21), Expect = 1.7 Identities = 45/53 (84%) Strand = Plus / Minus Query: 454 accagcatcttgatgtcgtccctgtccatgttggcctcctcgccggtgtacct 506 ||||||||||| || || | ||||||||||| | ||||||||||||||||| Sbjct: 736 accagcatctttatatcatttctgtccatgttctcttcctcgccggtgtacct 684
>gb|AC005572.1| Homo sapiens chromosome 5, PAC clone 248b21 (LBNL H141), complete sequence Length = 95448 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 ggaaaaagaacactgtatat 170 |||||||||||||||||||| Sbjct: 68705 ggaaaaagaacactgtatat 68724
>gb|AC134886.5| Oryza sativa chromosome 3 BAC OSJNBa0002D18 genomic sequence, complete sequence Length = 145714 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 cgggaaggacttgacggcgacgac 359 ||||||||||||| |||||||||| Sbjct: 89354 cgggaaggacttggcggcgacgac 89331
>gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome Length = 1838554 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 ccaaaacgtgtagatgctaa 215 |||||||||||||||||||| Sbjct: 1383589 ccaaaacgtgtagatgctaa 1383570
>gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome Length = 1899877 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 ccaaaacgtgtagatgctaa 215 |||||||||||||||||||| Sbjct: 1455713 ccaaaacgtgtagatgctaa 1455694
>gb|AE006601.1| Streptococcus pyogenes M1 GAS, section 130 of 167 of the complete genome Length = 10724 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 ccaaaacgtgtagatgctaa 215 |||||||||||||||||||| Sbjct: 5639 ccaaaacgtgtagatgctaa 5620
>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome Length = 1937111 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 ccaaaacgtgtagatgctaa 215 |||||||||||||||||||| Sbjct: 1460641 ccaaaacgtgtagatgctaa 1460622
>gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome Length = 1860355 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 ccaaaacgtgtagatgctaa 215 |||||||||||||||||||| Sbjct: 1401932 ccaaaacgtgtagatgctaa 1401913
>gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome Length = 1928252 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 ccaaaacgtgtagatgctaa 215 |||||||||||||||||||| Sbjct: 1477174 ccaaaacgtgtagatgctaa 1477155
>gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome Length = 1836467 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 ccaaaacgtgtagatgctaa 215 |||||||||||||||||||| Sbjct: 1378042 ccaaaacgtgtagatgctaa 1378023
>emb|CR774185.17| Zebrafish DNA sequence from clone CH211-237H18 in linkage group 13, complete sequence Length = 154017 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 cgtattactagtatttatta 276 |||||||||||||||||||| Sbjct: 87998 cgtattactagtatttatta 87979
>gb|AC114652.7| Mus musculus chromosome 18, clone RP24-156O17, complete sequence Length = 148737 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 tacttggaccaaccgtgtgc 73 |||||||||||||||||||| Sbjct: 55643 tacttggaccaaccgtgtgc 55662
>gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome Length = 1897573 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 ccaaaacgtgtagatgctaa 215 |||||||||||||||||||| Sbjct: 1453190 ccaaaacgtgtagatgctaa 1453171
>emb|CR848057.6| Zebrafish DNA sequence from clone DKEYP-84H9 in linkage group 16, complete sequence Length = 184783 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 cttccttatacaaaccgaaa 120 |||||||||||||||||||| Sbjct: 178185 cttccttatacaaaccgaaa 178204
>emb|AL833072.2|HSM804383 Homo sapiens genomic DNA; cDNA DKFZp451D0119 (from clone DKFZp451D0119) Length = 5281 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 ggaaaaagaacactgtatat 170 |||||||||||||||||||| Sbjct: 3485 ggaaaaagaacactgtatat 3466
>emb|CR626866.4| Zebrafish DNA sequence from clone DKEY-147F20 in linkage group 14, complete sequence Length = 161413 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 tactagtatttattagtaga 281 |||||||||||||||||||| Sbjct: 82114 tactagtatttattagtaga 82095
>gb|AC010433.9| Homo sapiens chromosome 5 clone CTD-2202L20, complete sequence Length = 258929 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 ggaaaaagaacactgtatat 170 |||||||||||||||||||| Sbjct: 120565 ggaaaaagaacactgtatat 120584
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0079B22, from chromosome 3, complete sequence Length = 156933 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 cggcggagggcgccgggaag 342 |||||||||||||||||||| Sbjct: 16795 cggcggagggcgccgggaag 16814
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 cagcgggtcggtggcctcgt 397 |||||||||||||||||||| Sbjct: 600986 cagcgggtcggtggcctcgt 600967
>gb|AE010083.1| Streptococcus pyogenes strain MGAS8232, section 131 of 173 of the complete genome Length = 10725 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 ccaaaacgtgtagatgctaa 215 |||||||||||||||||||| Sbjct: 5640 ccaaaacgtgtagatgctaa 5621
>gb|AY054120.1|AY054120 Mycobacterium smegmatis cosmid cTra12, partial sequence Length = 30277 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tgacggcgacgacctcggcg 366 |||||||||||||||||||| Sbjct: 30102 tgacggcgacgacctcggcg 30083
>gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0079B22, from chromosome 3, complete sequence Length = 125217 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 cggcggagggcgccgggaag 342 |||||||||||||||||||| Sbjct: 42423 cggcggagggcgccgggaag 42404
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 cgggaaggacttgacggcgacgac 359 ||||||||||||| |||||||||| Sbjct: 9817519 cgggaaggacttggcggcgacgac 9817542
>gb|AE014074.1| Streptococcus pyogenes MGAS315, complete genome Length = 1900521 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 ccaaaacgtgtagatgctaa 215 |||||||||||||||||||| Sbjct: 1492139 ccaaaacgtgtagatgctaa 1492120
>dbj|BA000034.2| Streptococcus pyogenes SSI-1 DNA, complete genome Length = 1894275 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 ccaaaacgtgtagatgctaa 215 |||||||||||||||||||| Sbjct: 404731 ccaaaacgtgtagatgctaa 404750
>emb|BX119965.9| Zebrafish DNA sequence from clone RP71-86I6 in linkage group 14, complete sequence Length = 135252 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 tactagtatttattagtaga 281 |||||||||||||||||||| Sbjct: 126941 tactagtatttattagtaga 126960
>dbj|AP005875.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0033K18 Length = 138487 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 cgggaaggacttgacggcgacgac 359 ||||||||||||| |||||||||| Sbjct: 126590 cgggaaggacttggcggcgacgac 126613
>emb|AL929292.7| Zebrafish DNA sequence from clone DKEY-11L24 in linkage group 14, complete sequence Length = 218922 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 tactagtatttattagtaga 281 |||||||||||||||||||| Sbjct: 33528 tactagtatttattagtaga 33547
>dbj|AK105139.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-F12, full insert sequence Length = 835 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 cggcggagggcgccgggaag 342 |||||||||||||||||||| Sbjct: 644 cggcggagggcgccgggaag 625
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 cagcgggtcggtggcctcgt 397 |||||||||||||||||||| Sbjct: 613007 cagcgggtcggtggcctcgt 612988 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,638,656 Number of Sequences: 3902068 Number of extensions: 3638656 Number of successful extensions: 64417 Number of sequences better than 10.0: 93 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 63694 Number of HSP's gapped (non-prelim): 714 length of query: 506 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 484 effective length of database: 17,147,199,772 effective search space: 8299244689648 effective search space used: 8299244689648 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
