>SPRT_PHOLL (Q7N118) Protein sprT|
          Length = 194

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 18/71 (25%), Positives = 31/71 (43%)
 Frame = +3

Query: 174 GKLHPHGGRWRHLLHQLLAHGDAEHPRHRRRDLAPRGVQSRTFMDFCGESGEVRRVRASG 353
           GK+ PHG +WR ++ ++L       P +R        V+S+TF  +C        +R   
Sbjct: 90  GKVPPHGKQWRWMMEEVL-----NVPANRTHKFKIDSVRSQTFTYYCNCQQHELTLRRHN 144

Query: 354 LGSRSRHRFLC 386
              R    ++C
Sbjct: 145 KILRGESHYIC 155

>DYHC_NEUCR (P45443) Dynein heavy chain, cytosolic (DYHC)|
          Length = 4367

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
 Frame = +1

Query: 25   SIKKLPSVLNTAYMRIYSLGTTRFISTKIHVNPERRWAD*AIRIVPM*GWANC-IHMAVG 201
            +I+ L ++     +RI++    R    ++    ER+W D A+R + M  +     H A+G
Sbjct: 2819 AIRPLETLSVEGLIRIWAHEALRLFQDRLVDEEERKWTDDAVRRIAMEYFPTIDEHKALG 2878

Query: 202  GAIFFISSW 228
            G I F S+W
Sbjct: 2879 GPILF-SNW 2886

>SRBP2_CRIGR (Q60429) Sterol regulatory element-binding protein 2 (SREBP-2)|
           (Sterol regulatory element-binding transcription factor
           2)
          Length = 1139

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 9/55 (16%)
 Frame = -3

Query: 335 PDLTALTTKIHEGA----ALYTTGGKITTSMPRMLG-----VSMCQELMKKMAPP 198
           P LTALTT +  GA     L  + G I T+MP M+G     +      +K++ PP
Sbjct: 270 PALTALTTPLQTGALQVPTLVGSNGTILTTMPVMMGQEKVPIKQVPGGVKQLEPP 324

>BCAR3_BOVIN (Q58DL5) Breast cancer anti-estrogen resistance protein 3|
          Length = 826

 Score = 25.8 bits (55), Expect(2) = 6.5
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -3

Query: 332 DLTALTTKIHEGAALYTTGGKITTSMPRMLGVSMC 228
           D  AL+ K H+  +    GGK+T   P  +G S C
Sbjct: 328 DRRALSLKAHQSESYLPIGGKLTPQSP-SVGTSPC 361



 Score = 22.3 bits (46), Expect(2) = 6.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 172 SPTLGLSGWPNRPIDVRGSHVSL 104
           SP++G S  PN P+   GS  +L
Sbjct: 353 SPSVGTSPCPNSPVFRTGSEPTL 375

>ZN297_MOUSE (Q9Z0G7) Zinc finger protein 297 (BING1 protein)|
          Length = 638

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 33/117 (28%), Positives = 42/117 (35%), Gaps = 9/117 (7%)
 Frame = +3

Query: 3   KLWKHLIEYQKTSLRFKH---GVHEDLFSRHYSIHQHKDTCEPRTSMGRLGHPDSPNVGL 173
           K+  HL E+ KT    K     V    F    S  +H+  CE R  MG  G    P  G 
Sbjct: 520 KMKHHLTEHMKTHTGLKPYECSVCAKKFMWRDSFMRHRGHCERRHRMGVGGVGSGPGPGP 579

Query: 174 GKLHPHGGRWRHLLHQLLAHG------DAEHPRHRRRDLAPRGVQSRTFMDFCGESG 326
           G   P G   +         G      ++  P   RR  +P  V  +  MDF G  G
Sbjct: 580 GPGTPSGPALQPKRESSTVGGGSGDEANSATPPSHRRVWSPPSVH-KVEMDFSGGGG 635

>YSYM_RHIET (Q08815) Hypothetical 19.2 kDa protein in syrM 5'region (ORF2)|
          Length = 171

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 19/54 (35%), Positives = 24/54 (44%)
 Frame = +3

Query: 138 RLGHPDSPNVGLGKLHPHGGRWRHLLHQLLAHGDAEHPRHRRRDLAPRGVQSRT 299
           RL HP +P V   +L       RH L+  + H D    RHR  DLA    +  T
Sbjct: 95  RLSHPSTP-VSDARLLQRARGGRHGLYIPVGHPDVPCDRHRHTDLAAHWTRDGT 147

>BARH1_DROME (Q24255) Homeobox protein B-H1 (Homeobox protein BarH1)|
          Length = 544

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 23/83 (27%), Positives = 32/83 (38%)
 Frame = +3

Query: 150 PDSPNVGLGKLHPHGGRWRHLLHQLLAHGDAEHPRHRRRDLAPRGVQSRTFMDFCGESGE 329
           P  PN    +LH H    +   HQ   H   + P           + S T M   G +  
Sbjct: 12  PSEPNAAHPQLHHHLSTLQQQHHQHHLHYGLQPPA------VAHSIHSTTTMSSGGST-- 63

Query: 330 VRRVRASGLGSRSRHRFLCDDDL 398
                ASG+G  +R RF+ +D L
Sbjct: 64  ---TTASGIGKPNRSRFMINDIL 83

>SPRT_YERPE (Q8ZHG6) Protein sprT|
          Length = 170

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +3

Query: 174 GKLHPHGGRWRHLLHQLLAHGDAEHPRHRRRDLAPRGVQSRTFMDFC 314
           G++ PHG  WR ++ Q+L     + P  R        V+S+TF   C
Sbjct: 90  GRVAPHGKEWRWMMEQVL-----KVPASRTHQFEVASVRSKTFNYQC 131

>Y4KF_RHISN (P55526) Hypothetical 47.4 kDa protein y4kF|
          Length = 434

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +3

Query: 162 NVGLGKLHPHGGRWRHL-LHQLLAHGDAEHPRHRRRDLAP 278
           + G G    HGGR RH+  H+   HG +E    RRRD  P
Sbjct: 364 DTGYGGFGAHGGRNRHIDEHRFRIHG-SESRSDRRRDACP 402

>TBCD_BOVIN (Q28205) Tubulin-specific chaperone D (Tubulin-folding cofactor D)|
           (Beta-tubulin cofactor D)
          Length = 1199

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
 Frame = +3

Query: 48  FKHGVHEDLFSRHYSIHQHKDTC----EPRTSMGRLGHPDSPNVGLGKLHPHGGRWRH 209
           FKHG  ED      ++ Q  D+C      +T + +LG      +GL  L P   +WR+
Sbjct: 268 FKHGKREDCLPYAATVLQCLDSCRLPDSNQTLLRKLGVKLVQRLGLTFLKPQVAKWRY 325


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,036,624
Number of Sequences: 219361
Number of extensions: 1734635
Number of successful extensions: 5318
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5316
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)