ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd21g22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TPP1_SCHPO (P78875) Trehalose-phosphatase (EC 3.1.3.12) (Trehalo... 65 2e-10
2TPS2_YEAST (P31688) Trehalose-phosphatase (EC 3.1.3.12) (Trehalo... 57 5e-08
3SYC_METCA (Q60BG8) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cyst... 35 0.20
4OTSB_SALTY (Q9L894) Trehalose-phosphatase (EC 3.1.3.12) (Trehalo... 35 0.20
5TPP_ENCCU (Q8SSL0) Probable trehalose-phosphatase (EC 3.1.3.12) ... 33 0.58
6PYRG_MYCCT (Q48965) CTP synthase (EC 6.3.4.2) (UTP--ammonia liga... 33 0.99
7OTSB_ECOLI (P31678) Trehalose-phosphatase (EC 3.1.3.12) (Trehalo... 32 1.3
8FA21C_HUMAN (Q9Y4E1) Protein FAM21C 31 2.9
9PAR6G_HUMAN (Q9BYG4) Partitioning defective 6 homolog gamma (PAR... 30 4.9
10FA21C_PONPY (Q5RDC1) Protein FAM21C 30 6.4
11CAPP_THET8 (Q5SKL7) Phosphoenolpyruvate carboxylase (EC 4.1.1.31... 30 6.4
12CAPP_THET2 (Q72L05) Phosphoenolpyruvate carboxylase (EC 4.1.1.31... 30 6.4

>TPP1_SCHPO (P78875) Trehalose-phosphatase (EC 3.1.3.12) (Trehalose 6-phosphate|
            phosphatase) (TPP)
          Length = 817

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 3/131 (2%)
 Frame = -1

Query: 660  PDFGSCQAKELHEHXES-VLSNEPVSVKADVNHVEVKPQGVSKGLVAKRMLSAMQARGLL 484
            P+ G+ QA E     E  V S   V +     ++EV+P  ++KG + K++LS+     L 
Sbjct: 692  PENGAFQALECEALLEELVCSKYDVEIMRGKANLEVRPSSINKGGIVKQILSSYPEDSL- 750

Query: 483  PDFILCIGDDRSDEDMFEVITTAVDGPYLNPEAKVFACTVG--RKPSKAKYYLDDTADIV 310
            P FI C GDDR+DEDMF  +        +N E   FA T+G  +K S A + + D A+++
Sbjct: 751  PSFIFCAGDDRTDEDMFRSLH---KNTRINKETS-FAVTIGSDKKLSIADWCIADPANVI 806

Query: 309  RLIQALANVSD 277
             ++  LAN ++
Sbjct: 807  DILADLANFTN 817



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>TPS2_YEAST (P31688) Trehalose-phosphatase (EC 3.1.3.12) (Trehalose 6-phosphate|
           phosphatase) (TPP) (Trehalose synthase complex catalytic
           subunit TPS2)
          Length = 896

 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
 Frame = -1

Query: 660 PDFGSCQAKELHEHXESVLSNEPVSVKADVNHVEVKPQGVSKGLVAKRM----------- 514
           P+ G   AKEL E   S   +  + V     ++EV+P+ V+KG + KR+           
Sbjct: 700 PELGEFHAKELKEKLLSFTDDFDLEVMDGKANIEVRPRFVNKGEIVKRLVWHQHGKPQDM 759

Query: 513 ---LSAMQARGLLPDFILCIGDDRSDEDMFEVITT 418
              +S    +  +PDF+LC+GDD +DEDMF  + T
Sbjct: 760 LKGISEKLPKDEMPDFVLCLGDDFTDEDMFRQLNT 794



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>SYC_METCA (Q60BG8) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA|
           ligase) (CysRS)
          Length = 465

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
 Frame = -1

Query: 495 RGLLPDFILCIGDDRSDEDMFEVITTAVDGPYLNPEAKVFACTVGRKPSKAKYYLD-DTA 319
           RGL PD  L +G+DR DE        A+   +  PEA      + R+ ++ K       A
Sbjct: 324 RGLAPDLPLPLGEDR-DEGFSSRFADAMQDDFNTPEAIAVLFDLAREINRHKAAEPAKAA 382

Query: 318 DIVRLIQALANVSDEVQGGPPSYFFACAGTS 226
            +   +++L NV   +Q  P +YF + AG S
Sbjct: 383 ALGATLKSLGNVLGLLQTDPEAYFKSDAGGS 413



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>OTSB_SALTY (Q9L894) Trehalose-phosphatase (EC 3.1.3.12) (Trehalose 6-phosphate|
           phosphatase) (TPP)
          Length = 267

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 26/99 (26%), Positives = 43/99 (43%)
 Frame = -1

Query: 564 VEVKPQGVSKGLVAKRMLSAMQARGLLPDFILCIGDDRSDEDMFEVITTAVDGPYLNPEA 385
           VE+KP+G +KG      +      G +P F   +GDD +DE  F V+            A
Sbjct: 166 VEIKPKGTNKGEAIAAFMQEAPFAGRIPVF---VGDDLTDEAGFGVVN----------HA 212

Query: 384 KVFACTVGRKPSKAKYYLDDTADIVRLIQALANVSDEVQ 268
              +  VG   ++A + L+   D+ R ++ +     E Q
Sbjct: 213 GGISVKVGVGATQAAWRLESVPDVWRWLEQINYPQQEQQ 251



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>TPP_ENCCU (Q8SSL0) Probable trehalose-phosphatase (EC 3.1.3.12) (Trehalose|
           6-phosphate phosphatase) (TPP)
          Length = 718

 Score = 33.5 bits (75), Expect = 0.58
 Identities = 20/62 (32%), Positives = 29/62 (46%)
 Frame = -1

Query: 477 FILCIGDDRSDEDMFEVITTAVDGPYLNPEAKVFACTVGRKPSKAKYYLDDTADIVRLIQ 298
           F+LC GDD +DEDMF+V              K +   VG + + A Y + D  +   L+ 
Sbjct: 668 FVLCAGDDVADEDMFDV-------------CKGYTIKVGDQSTSAAYRVKDPENFRMLLG 714

Query: 297 AL 292
            L
Sbjct: 715 RL 716



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>PYRG_MYCCT (Q48965) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP|
           synthetase)
          Length = 532

 Score = 32.7 bits (73), Expect = 0.99
 Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
 Frame = -1

Query: 513 LSAMQARGLLPDFILCIGDDRSDEDMFEVITTAVDGPYLNPEAKVFACTVGRKP-SKAKY 337
           + AM + G+ PD I+C  D  S +D+ E I+   + P  N    +   ++ R P + AK 
Sbjct: 196 VKAMASLGIQPDVIVCRSDSSSPKDIKEKISLFCNVPITNIIDAIDQDSIYRVPLALAKQ 255

Query: 336 YLDDTADIVRLIQALANVSD 277
            L D   I+  +Q  AN  D
Sbjct: 256 NLQDI--IIEQLQLKANAID 273



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>OTSB_ECOLI (P31678) Trehalose-phosphatase (EC 3.1.3.12) (Trehalose 6-phosphate|
           phosphatase) (TPP)
          Length = 266

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = -1

Query: 564 VEVKPQGVSKGLVAKRMLSAMQARGLLPDFILCIGDDRSDEDMFEVI 424
           VE+KP+G SKG      +      G  P F   +GDD +DE  F V+
Sbjct: 166 VEIKPRGTSKGEAIAAFMQEAPFIGRTPVF---LGDDLTDESGFAVV 209



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>FA21C_HUMAN (Q9Y4E1) Protein FAM21C|
          Length = 1320

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 35/145 (24%), Positives = 57/145 (39%), Gaps = 16/145 (11%)
 Frame = -1

Query: 561  EVKPQGVSKGLVAKRMLSAMQARGLLPDFILCIGDDRSDEDMFEVITTAVDGPYLNPEAK 382
            E +   V +G +A+    A+   G  P      G+D ++E +         GP    +  
Sbjct: 1034 EAEDMSVPRGPIAQWADGAISPNGHRPQLRAASGEDSTEEALAAAAAPWEGGPVPGVDTS 1093

Query: 381  VFACTVGRKPSKAKYYLDDTADI---------VRLIQALANVSDE-----VQGGPPSYFF 244
             FA ++G    +A  +  D+ DI         V   +  A +++      V G   S  F
Sbjct: 1094 PFAKSLGHSRGEADLF--DSGDIFSTGTGSQSVERTKPKAKIAENPANPPVGGKAKSPMF 1151

Query: 243  ACAG--TSTDDRALN*GGKPAKKTS 175
               G  +S DD   +   KPAKKT+
Sbjct: 1152 PALGEASSDDDLFQSAKPKPAKKTN 1176



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>PAR6G_HUMAN (Q9BYG4) Partitioning defective 6 homolog gamma (PAR-6 gamma)|
           (PAR6D)
          Length = 376

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 9/72 (12%)
 Frame = +1

Query: 4   ESMYTTAKQQHHHDNDDRPLL-------LLILKHSTRLCEPTARSISP--RVFPEARSYS 156
           E  Y      HH  N D  +        LL + +    C+  + S +P  RVF + R  +
Sbjct: 43  EDFYKLVVHTHHISNSDVTIGYADVHGDLLPINNDDNFCKAVS-SANPLLRVFIQKREEA 101

Query: 157 GRGCAGAGLLCR 192
            RG  GAG LCR
Sbjct: 102 ERGSLGAGSLCR 113



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>FA21C_PONPY (Q5RDC1) Protein FAM21C|
          Length = 1340

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 35/147 (23%), Positives = 56/147 (38%), Gaps = 18/147 (12%)
 Frame = -1

Query: 561  EVKPQGVSKGLVAKRMLSAMQARGLLPDFILCIGDDRSDEDMFEVITTAVDGPYLNPEAK 382
            E +   V +G +A+     +   G  P      G+D ++E +         GP    +  
Sbjct: 1054 EAEDMSVPRGPIAQWADGTISPNGHRPQLRAASGEDSTEEALAAAAAPWEGGPVPGVDRS 1113

Query: 381  VFACTVGRKPSKAKYYLDDTADI----------------VRLIQALANVSDEVQGGPPSY 250
             FA ++G    +A  +  D+ DI                 ++ + LAN    V G   S 
Sbjct: 1114 PFAKSLGHSRGEADLF--DSGDIFSTGTGSQSEERTKPKAKIAENLAN--PPVGGKAKSP 1169

Query: 249  FFACAG--TSTDDRALN*GGKPAKKTS 175
             F   G  +S DD   +   KPAKKT+
Sbjct: 1170 MFPALGEASSDDDLFQSAKPKPAKKTN 1196



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>CAPP_THET8 (Q5SKL7) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)|
           (PEPC)
          Length = 858

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 22/55 (40%), Positives = 27/55 (49%)
 Frame = -1

Query: 300 QALANVSDEVQGGPPSYFFACAGTSTDDRALN*GGKPAKKTSTSTAPA*IRPRFR 136
           +AL+ V +EV  G P YFF   GTST       GG PA +   S  P  +  R R
Sbjct: 547 EALSRVGEEV--GLPVYFFHGRGTSTAR-----GGGPAGRAIASLPPRSVGRRIR 594



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>CAPP_THET2 (Q72L05) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)|
           (PEPC)
          Length = 858

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 22/55 (40%), Positives = 27/55 (49%)
 Frame = -1

Query: 300 QALANVSDEVQGGPPSYFFACAGTSTDDRALN*GGKPAKKTSTSTAPA*IRPRFR 136
           +AL+ V +EV  G P YFF   GTST       GG PA +   S  P  +  R R
Sbjct: 547 EALSRVGEEV--GLPVYFFHGRGTSTAR-----GGGPAGRAIASLPPRSVGRRIR 594


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,003,466
Number of Sequences: 219361
Number of extensions: 1394931
Number of successful extensions: 4218
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4214
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6314008338
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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