Clone Name | rbasd21g12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | MATK_WELMI (Q8MEW9) Maturase K (Intron maturase) | 28 | 5.0 |
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>MATK_WELMI (Q8MEW9) Maturase K (Intron maturase)| Length = 524 Score = 28.5 bits (62), Expect = 5.0 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 3/39 (7%) Frame = -2 Query: 116 ICWVKQV*SRFVCFLHRMLEVLLVLCHLSI---YLYYNT 9 +CW+ V CFLH + +L L HL+I ++++N+ Sbjct: 159 LCWIDDV-----CFLHLLSSMLCFLKHLTILDKFIFFNS 192 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,379,477 Number of Sequences: 219361 Number of extensions: 374623 Number of successful extensions: 602 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 598 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 602 length of database: 80,573,946 effective HSP length: 45 effective length of database: 70,702,701 effective search space used: 1696864824 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)