ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd21g12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MATK_WELMI (Q8MEW9) Maturase K (Intron maturase) 28 5.0

>MATK_WELMI (Q8MEW9) Maturase K (Intron maturase)|
          Length = 524

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = -2

Query: 116 ICWVKQV*SRFVCFLHRMLEVLLVLCHLSI---YLYYNT 9
           +CW+  V     CFLH +  +L  L HL+I   ++++N+
Sbjct: 159 LCWIDDV-----CFLHLLSSMLCFLKHLTILDKFIFFNS 192


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,379,477
Number of Sequences: 219361
Number of extensions: 374623
Number of successful extensions: 602
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 80,573,946
effective HSP length: 45
effective length of database: 70,702,701
effective search space used: 1696864824
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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