>VRP1_YEAST (P37370) Verprolin|
          Length = 817

 Score = 33.5 bits (75), Expect = 0.53
 Identities = 30/102 (29%), Positives = 36/102 (35%), Gaps = 2/102 (1%)
 Frame = -1

Query: 573 SPSSPAFPCHLAPAP--HKPKLGSAIAATHVLPELCLLP*CYTRAPERPLTLLRVLASSI 400
           SPS P  P    P P  H P L         LP +   P   T AP  P   L    SS 
Sbjct: 304 SPSQPPLPSSAPPIPTSHAPPLPPTAPPPPSLPNVTSAPKKATSAPAPPPPPLPAAMSSA 363

Query: 399 ASSDPTFVCHRSTTATALPSTCSHQHWMCRTAPNPKIPRARP 274
           +++         T A  LP+T S       + P P  P   P
Sbjct: 364 STNSVKATPVPPTLAPPLPNTTSVPPNKASSMPAPPPPPPPP 405

>CAC1D_RAT (P27732) Voltage-dependent L-type calcium channel alpha-1D subunit|
           (Voltage-gated calcium channel alpha subunit Cav1.3)
           (Calcium channel, L type, alpha-1 polypeptide, isoform
           2) (RAT brain class D) (RBD)
          Length = 2203

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 9/71 (12%)
 Frame = +3

Query: 339 CSGGLWRWCY---------GGTQRWGQSSLSSWLRHAVASGGALEHACSTKAASRARGAH 491
           C G LW W            G +RWGQ+   S LR    S GA E  C  + +  +    
Sbjct: 488 CCGSLWCWWKRRGAAKTGPSGCRRWGQAISKSKLR----SHGAREALCVCRCSLES---- 539

Query: 492 VLRQWQSRASA 524
           +++ W SR SA
Sbjct: 540 LVKLWTSRFSA 550

>CHA1_ANTPO (P02846) Chorion class A protein PC292 precursor (Fragment)|
          Length = 119

 Score = 27.3 bits (59), Expect(2) = 3.4
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 285 VGSLDWARCGTSNAGGCRCSGGLWRWC 365
           +G++D+  CG +NAGGC   GG    C
Sbjct: 85  IGAVDF--CGRANAGGCVSIGGRCTGC 109



 Score = 22.3 bits (46), Expect(2) = 3.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 131 GPTIGGYGG*LMGSLAANG 187
           GP  G YGG  +G++A  G
Sbjct: 50  GPACGSYGGEGIGNVAVAG 68

>MEGF6_RAT (O88281) Multiple epidermal growth factor-like domains 6 precursor|
           (EGF-like domain-containing protein 3) (Multiple
           EGF-like domain protein 3)
          Length = 1574

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 19/76 (25%), Positives = 28/76 (36%), Gaps = 4/76 (5%)
 Frame = +3

Query: 240 RCCPSGQFRRWMDAPVGSLDWARCGTSNAGG----CRCSGGLWRWCYGGTQRWGQSSLSS 407
           RCCP    +   +  +  +D   C ++N G     C   GG +  C  G Q  G      
Sbjct: 106 RCCPGWSQKPGQEGCLSDVD--ECASANGGCEGPCCNTVGGFYCRCPPGYQLQGDGKTCQ 163

Query: 408 WLRHAVASGGALEHAC 455
            +    A  G  +H C
Sbjct: 164 DVDECRAHNGGCQHRC 179

>TEGU_EBV (P03186) Large tegument protein|
          Length = 3149

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 27/110 (24%), Positives = 42/110 (38%), Gaps = 10/110 (9%)
 Frame = -1

Query: 570 PSSPAFPCHLAPAPHKPKLGSAIAATHVLPELCLLP*CYTRAPERPLTLLRVLASSIASS 391
           PS+   P  + P PH+    S     H  P   + P   T +P  PL +   L  +  S+
Sbjct: 457 PSAARLPPPVIPIPHQSPPASP--TPHPAPVSTIAP-SVTPSPRLPLQIPIPLPQAAPSN 513

Query: 390 ----------DPTFVCHRSTTATALPSTCSHQHWMCRTAPNPKIPRARPS 271
                      PT     +TT  + P T          AP+P +P+ +P+
Sbjct: 514 PKIPLTTPSPSPTAAAAPTTTTLSPPPTQQQPPQSAAPAPSPLLPQQQPT 563

>DLG3_HUMAN (Q92796) Discs large homolog 3 (Synapse-associated protein 102)|
           (SAP102) (Neuroendocrine-DLG) (XLMR)
          Length = 817

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +2

Query: 146 GYGG*LMGSLAANGCATSDPR--AATISNGEDTPMLPIRPVP 265
           GYGG    +L +   AT  PR  A  I  G D   +P++PVP
Sbjct: 50  GYGGYSSQTLPSQAGATPTPRTKAKLIPTGRDVGPVPLKPVP 91

>YUAZ_ECOLI (P08868) Hypothetical protein yuaZ|
          Length = 90

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
 Frame = -1

Query: 561 PAFPCHLAPAPHKPKLGSAIAATHVLPELCLLP*CYTRAPERPLTLLRVLASSIA-SSDP 385
           PA+P H A   +  K+         L  L  +  C  R P  P+T  R  ++     + P
Sbjct: 13  PAYPQHFAHG-YVDKIPGYPGRAGTLTGLHPMQVCRCRRPPHPVTFRRFSSTRCGFGAAP 71

Query: 384 TFVCHRSTTATALP 343
            FVC R  T  A P
Sbjct: 72  AFVCGRPVTGAARP 85

>PARM1_MOUSE (Q923D3) Protein PARM-1 precursor|
          Length = 296

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 11/93 (11%)
 Frame = -1

Query: 567 SSPA-FPC-----HLAPAPHKPKLGS---AIAATHVLPELCLLP*CYTRAPERPLT-LLR 418
           SSPA FP      HLAP P +  LGS    + AT     + L     T A   P T L  
Sbjct: 99  SSPAGFPSTSSDGHLAPTPEEHSLGSPEATVPATGSQSPMLLSSQAPTSATTSPATSLSE 158

Query: 417 VLASSIASSDPTFVCH-RSTTATALPSTCSHQH 322
            L++S+ SS  + V + + T A   P++ + +H
Sbjct: 159 SLSASVTSSHNSTVANIQPTEAPMAPASPTEEH 191

>MGM_EUBBA (Q59268) 2-methyleneglutarate mutase (EC 5.4.99.4)|
           (Alpha-methyleneglutarate mutase)
          Length = 614

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3

Query: 9   HGDIIKXLTWSWSNCRVGPTCHLHSGYKGVN*LLTKVV 122
           H  II  L   +    +GP  H+H G +G++   TKVV
Sbjct: 161 HLSIINALIAGFDGTDIGPVIHVHFGGRGIHDYKTKVV 198


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,443,440
Number of Sequences: 219361
Number of extensions: 2028022
Number of successful extensions: 6156
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6150
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5824436538
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)