ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd21g05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK104076.1| Oryza sativa (japonica cultivar-group) cDNA clon... 555 e-155
2dbj|AK103551.1| Oryza sativa (japonica cultivar-group) cDNA clon... 555 e-155
3dbj|AB037150.1| Oryza sativa (japonica cultivar-group) OsRPN8 mR... 555 e-155
4dbj|AK061835.1| Oryza sativa (japonica cultivar-group) cDNA clon... 541 e-150
5gb|AY109022.1| Zea mays PCO082032 mRNA sequence 500 e-138
6gb|AY111094.1| Zea mays CL9802_1 mRNA sequence 391 e-105
7gb|DQ222517.1| Solanum tuberosum clone 119G03 unknown mRNA 151 4e-33
8ref|NM_120660.2| Arabidopsis thaliana ATHMOV34 AT5G05780 (ATHMOV... 133 9e-28
9gb|AY230840.1| Arabidopsis thaliana 26S proteasome subunit RPN8a... 133 9e-28
10gb|AF378878.1|AF378878 Arabidopsis thaliana AT5g05780/MJJ3_19 mR... 133 9e-28
11gb|BT002610.1| Arabidopsis thaliana At5g05780/MJJ3_19 mRNA, comp... 133 9e-28
12gb|AY230839.1| Arabidopsis thaliana 26S proteasome subunit RPN8a... 125 2e-25
13emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4,... 125 2e-25
14dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
15gb|AY087393.1| Arabidopsis thaliana clone 34868 mRNA, complete s... 125 2e-25
16gb|U54560.1|ATU54560 Arabidopsis thaliana putative 26S proteasom... 125 2e-25
17emb|BX830010.1|CNS0A09A Arabidopsis thaliana Full-length cDNA Co... 117 5e-23
18ref|NM_111962.3| Arabidopsis thaliana unknown protein AT3G11270 ... 115 2e-22
19gb|AY258412.1| Arabidopsis thaliana 26S proteasome subunit RPN8b... 115 2e-22
20gb|AY639600.1| Lycopersicon pimpinellifolium orion Hcr9 gene clu... 103 8e-19
21emb|BX833880.1|CNS09Z77 Arabidopsis thaliana Full-length cDNA Co... 94 8e-16
22gb|AC073395.6|AC073395 Arabidopsis thaliana chromosome 3 BAC F11... 90 1e-14
23dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 86 2e-13
24dbj|AP006465.4| Oryza sativa (japonica cultivar-group) genomic D... 86 2e-13
25dbj|AB005237.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 86 2e-13
26dbj|AP005834.4| Oryza sativa (japonica cultivar-group) genomic D... 84 8e-13
27dbj|AK222016.1| Arabidopsis thaliana mRNA for 26S proteasome reg... 82 3e-12
28ref|XM_804367.1| Trypanosoma cruzi strain CL Brener hypothetical... 44 0.66
29ref|XM_811105.1| Trypanosoma cruzi strain CL Brener hypothetical... 44 0.66
30dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 44 0.66
31ref|XM_749538.1| Aspergillus fumigatus Af293 nuclear exosome com... 42 2.6
32gb|AC156639.2| Mus musculus BAC clone RP23-301M11 from chromosom... 42 2.6
33gb|AY106142.1| Zea mays PCO072430 mRNA sequence 42 2.6 
>dbj|AK104076.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-C08, full
            insert sequence
          Length = 1325

 Score =  555 bits (280), Expect = e-155
 Identities = 415/460 (90%)
 Strand = Plus / Minus

                                                                        
Query: 287  taggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgt 346
            |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1057 taggtatggcggttggcttcgaatcctcggctttctcatgctccttgtttagcatcttgt 998

                                                                        
Query: 347  tgttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgacca 406
            | |||||||| || ||||| |||||||||||||||||||| ||||||| |||||||||||
Sbjct: 997  tattgatcaagttatggagtgcgatgacactccggataagagaagacaagtatatgacca 938

                                                                        
Query: 407  gcatcatatcatttgttttcactgcaaaggctttaatgagctcatttacgttgagattgg 466
             ||||||||| |||||||| ||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 937  acatcatatcgtttgttttaactgcaaaggctttaataagctcgtttacattgagattgg 878

                                                                        
Query: 467  ggagcagattaaacacatcctgcaagtggtacaaaatctcgtggttcagtgggagcttcc 526
            |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 877  ggagcagattaaacacatcctgcaagtggtacaaaatctcatgattcagtgggagcttcc 818

                                                                        
Query: 527  cttcaattacaagatctagataaccccggatctccgtaagcctcgcatcaagtcccttca 586
            ||||||||||||||||||  || || ||||||||| | ||||| || || ||||| ||||
Sbjct: 817  cttcaattacaagatctaagtacccacggatctccctgagccttgcgtccagtcctttca 758

                                                                        
Query: 587  gggcagcaagcttgctgctgacctctgttgcaagtgtgcttattgttgtgtctttcacat 646
             ||| |||||||||||| | |||||||| ||||| ||||||||||||||||| || ||||
Sbjct: 757  aggctgcaagcttgctggttacctctgtcgcaagcgtgcttattgttgtgtccttgacat 698

                                                                        
Query: 647  ccctcagaaggtgctcaactccgatttcctcaacttcatgagcagcaatttctgatggca 706
            |||||||||| ||||||||||||||||||||||| || || ||||| |||||||| || |
Sbjct: 697  ccctcagaagatgctcaactccgatttcctcaacctcgtgggcagctatttctgaaggaa 638

                                                    
Query: 707  cgtggacgaacaccttttgacttttctgagtagcattctc 746
            | || || ||||||||||||||||| ||||||||||||||
Sbjct: 637  catgaacaaacaccttttgacttttttgagtagcattctc 598



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 58/66 (87%), Gaps = 2/66 (3%)
 Strand = Plus / Minus

                                                                        
Query: 92   agctcacagaatgtaaggttttgtcgttgacctcgtcgcacatgaagtaaacatc-aaag 150
            |||||||||||||||| | |||| |||||||||  ||| ||||||| |||||||| ||||
Sbjct: 1238 agctcacagaatgtaaag-tttgccgttgaccttatcgtacatgaaataaacatcgaaag 1180

                  
Query: 151  tgtaaa 156
            ||||||
Sbjct: 1179 tgtaaa 1174



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 16   aatccgcatcaccaaacatgatgcgacacatgaaaca 52
            |||||||||||| |||||||||||  | |||||||||
Sbjct: 1320 aatccgcatcacaaaacatgatgcaccccatgaaaca 1284
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>dbj|AK103551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132F12, full
            insert sequence
          Length = 1431

 Score =  555 bits (280), Expect = e-155
 Identities = 415/460 (90%)
 Strand = Plus / Minus

                                                                        
Query: 287  taggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgt 346
            |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1130 taggtatggcggttggcttcgaatcctcggctttctcatgctccttgtttagcatcttgt 1071

                                                                        
Query: 347  tgttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgacca 406
            | |||||||| || ||||| |||||||||||||||||||| ||||||| |||||||||||
Sbjct: 1070 tattgatcaagttatggagtgcgatgacactccggataagagaagacaagtatatgacca 1011

                                                                        
Query: 407  gcatcatatcatttgttttcactgcaaaggctttaatgagctcatttacgttgagattgg 466
             ||||||||| |||||||| ||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 1010 acatcatatcgtttgttttaactgcaaaggctttaataagctcgtttacattgagattgg 951

                                                                        
Query: 467  ggagcagattaaacacatcctgcaagtggtacaaaatctcgtggttcagtgggagcttcc 526
            |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 950  ggagcagattaaacacatcctgcaagtggtacaaaatctcatgattcagtgggagcttcc 891

                                                                        
Query: 527  cttcaattacaagatctagataaccccggatctccgtaagcctcgcatcaagtcccttca 586
            ||||||||||||||||||  || || ||||||||| | ||||| || || ||||| ||||
Sbjct: 890  cttcaattacaagatctaagtacccacggatctccctgagccttgcgtccagtcctttca 831

                                                                        
Query: 587  gggcagcaagcttgctgctgacctctgttgcaagtgtgcttattgttgtgtctttcacat 646
             ||| |||||||||||| | |||||||| ||||| ||||||||||||||||| || ||||
Sbjct: 830  aggctgcaagcttgctggttacctctgtcgcaagcgtgcttattgttgtgtccttgacat 771

                                                                        
Query: 647  ccctcagaaggtgctcaactccgatttcctcaacttcatgagcagcaatttctgatggca 706
            |||||||||| ||||||||||||||||||||||| || || ||||| |||||||| || |
Sbjct: 770  ccctcagaagatgctcaactccgatttcctcaacctcgtgggcagctatttctgaaggaa 711

                                                    
Query: 707  cgtggacgaacaccttttgacttttctgagtagcattctc 746
            | || || ||||||||||||||||| ||||||||||||||
Sbjct: 710  catgaacaaacaccttttgacttttttgagtagcattctc 671



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 58/66 (87%), Gaps = 2/66 (3%)
 Strand = Plus / Minus

                                                                        
Query: 92   agctcacagaatgtaaggttttgtcgttgacctcgtcgcacatgaagtaaacatc-aaag 150
            |||||||||||||||| | |||| |||||||||  ||| ||||||| |||||||| ||||
Sbjct: 1311 agctcacagaatgtaaag-tttgccgttgaccttatcgtacatgaaataaacatcgaaag 1253

                  
Query: 151  tgtaaa 156
            ||||||
Sbjct: 1252 tgtaaa 1247



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 16   aatccgcatcaccaaacatgatgcgacacatgaaaca 52
            |||||||||||| |||||||||||  | |||||||||
Sbjct: 1393 aatccgcatcacaaaacatgatgcaccccatgaaaca 1357
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>dbj|AB037150.1| Oryza sativa (japonica cultivar-group) OsRPN8 mRNA for 26S proteasome
            regulatory particle non-ATPase subunit8, complete cds
          Length = 1308

 Score =  555 bits (280), Expect = e-155
 Identities = 415/460 (90%)
 Strand = Plus / Minus

                                                                        
Query: 287  taggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgt 346
            |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1042 taggtatggcggttggcttcgaatcctcggctttctcatgctccttgtttagcatcttgt 983

                                                                        
Query: 347  tgttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgacca 406
            | |||||||| || ||||| |||||||||||||||||||| ||||||| |||||||||||
Sbjct: 982  tattgatcaagttatggagtgcgatgacactccggataagagaagacaagtatatgacca 923

                                                                        
Query: 407  gcatcatatcatttgttttcactgcaaaggctttaatgagctcatttacgttgagattgg 466
             ||||||||| |||||||| ||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 922  acatcatatcgtttgttttaactgcaaaggctttaataagctcgtttacattgagattgg 863

                                                                        
Query: 467  ggagcagattaaacacatcctgcaagtggtacaaaatctcgtggttcagtgggagcttcc 526
            |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 862  ggagcagattaaacacatcctgcaagtggtacaaaatctcatgattcagtgggagcttcc 803

                                                                        
Query: 527  cttcaattacaagatctagataaccccggatctccgtaagcctcgcatcaagtcccttca 586
            ||||||||||||||||||  || || ||||||||| | ||||| || || ||||| ||||
Sbjct: 802  cttcaattacaagatctaagtacccacggatctccctgagccttgcgtccagtcctttca 743

                                                                        
Query: 587  gggcagcaagcttgctgctgacctctgttgcaagtgtgcttattgttgtgtctttcacat 646
             ||| |||||||||||| | |||||||| ||||| ||||||||||||||||| || ||||
Sbjct: 742  aggctgcaagcttgctggttacctctgtcgcaagcgtgcttattgttgtgtccttgacat 683

                                                                        
Query: 647  ccctcagaaggtgctcaactccgatttcctcaacttcatgagcagcaatttctgatggca 706
            |||||||||| ||||||||||||||||||||||| || || ||||| |||||||| || |
Sbjct: 682  ccctcagaagatgctcaactccgatttcctcaacctcgtgggcagctatttctgaaggaa 623

                                                    
Query: 707  cgtggacgaacaccttttgacttttctgagtagcattctc 746
            | || || ||||||||||||||||| ||||||||||||||
Sbjct: 622  catgaacaaacaccttttgacttttttgagtagcattctc 583



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 58/66 (87%), Gaps = 2/66 (3%)
 Strand = Plus / Minus

                                                                        
Query: 92   agctcacagaatgtaaggttttgtcgttgacctcgtcgcacatgaagtaaacatc-aaag 150
            |||||||||||||||| | |||| |||||||||  ||| ||||||| |||||||| ||||
Sbjct: 1223 agctcacagaatgtaaag-tttgccgttgaccttatcgtacatgaaataaacatcgaaag 1165

                  
Query: 151  tgtaaa 156
            ||||||
Sbjct: 1164 tgtaaa 1159
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>dbj|AK061835.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-D07, full
            insert sequence
          Length = 1373

 Score =  541 bits (273), Expect = e-150
 Identities = 415/461 (90%), Gaps = 1/461 (0%)
 Strand = Plus / Minus

                                                                        
Query: 287  taggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgt 346
            |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1072 taggtatggcggttggcttcgaatcctcggctttctcatgctccttgtttagcatcttgt 1013

                                                                        
Query: 347  tgttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgacca 406
            | |||||||| || ||||| |||||||||||||||||||| ||||||| |||||||||||
Sbjct: 1012 tattgatcaagttatggagtgcgatgacactccggataagagaagacaagtatatgacca 953

                                                                        
Query: 407  gcatcatatcatttgttttcactgcaaaggctttaatgagctcatttacgttgagattgg 466
             ||||||||| |||||||| ||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 952  acatcatatcgtttgttttaactgcaaaggctttaataagctcgtttacattgagattgg 893

                                                                        
Query: 467  ggagcagattaaacacatcctgcaagtggtacaaaatctcgtggttcagtgggagcttcc 526
            |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 892  ggagcagattaaacacatcctgcaagtggtacaaaatctcatgattcagtgggagcttcc 833

                                                                        
Query: 527  cttcaattacaagatctagataaccccggatctccgtaagcctcgcatcaagtcccttca 586
            ||||||||||||||||||  || || ||||||||| | ||||| || || ||||| ||||
Sbjct: 832  cttcaattacaagatctaagtacccacggatctccctgagccttgcgtccagtcctttca 773

                                                                        
Query: 587  gggcagcaagcttgctgctgacctctgttgcaagtgtgcttattgttgtgtctttcacat 646
             ||| |||||||||||| | |||||||| ||||| ||||||||||||||||| || ||||
Sbjct: 772  aggctgcaagcttgctggttacctctgtcgcaagcgtgcttattgttgtgtccttgacat 713

                                                                        
Query: 647  ccctcagaaggtgctcaactccgatttcctcaacttcatgagcagcaatttctgatggca 706
            |||||||||| ||||||||||||||||||||||| || || ||||| |||||||| || |
Sbjct: 712  ccctcagaagatgctcaactccgatttcctcaacctcgtgggcagctatttctgaaggaa 653

                                                     
Query: 707  cgtggacgaacaccttttgac-ttttctgagtagcattctc 746
            | || || ||||||||||||| |||| ||||||||||||||
Sbjct: 652  catgaacaaacaccttttgactttttttgagtagcattctc 612



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 58/66 (87%), Gaps = 2/66 (3%)
 Strand = Plus / Minus

                                                                        
Query: 92   agctcacagaatgtaaggttttgtcgttgacctcgtcgcacatgaagtaaacatc-aaag 150
            |||||||||||||||| | |||| |||||||||  ||| ||||||| |||||||| ||||
Sbjct: 1253 agctcacagaatgtaaag-tttgccgttgaccttatcgtacatgaaataaacatcgaaag 1195

                  
Query: 151  tgtaaa 156
            ||||||
Sbjct: 1194 tgtaaa 1189



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 16   aatccgcatcaccaaacatgatgcgacacatgaaaca 52
            |||||||||||| |||||||||||  | |||||||||
Sbjct: 1335 aatccgcatcacaaaacatgatgcaccccatgaaaca 1299
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>gb|AY109022.1| Zea mays PCO082032 mRNA sequence
          Length = 1409

 Score =  500 bits (252), Expect = e-138
 Identities = 423/480 (88%)
 Strand = Plus / Minus

                                                                        
Query: 267  cgtttagctcccggctgccgtaggtatggcggctggcttcgaatcctcggccttctcatg 326
            ||||||||| ||||| || ||||| ||||||| ||| |||||||||||||||||||| ||
Sbjct: 1069 cgtttagcttccggcagcagtaggaatggcggttggtttcgaatcctcggccttctcgtg 1010

                                                                        
Query: 327  ctccttgtttagcatcttgttgttgatcaaattgtggagagcgatgacactccggataag 386
            |||||||||||||||||| |||||||| |||||||| || || ||||| |||||||| ||
Sbjct: 1009 ctccttgtttagcatcttattgttgattaaattgtgaagcgcaatgacgctccggatcag 950

                                                                        
Query: 387  ggaagacaggtatatgaccagcatcatatcatttgttttcactgcaaaggctttaatgag 446
             |||||||||||||| |||| |||||| || |||||||||||||||||||||||||| ||
Sbjct: 949  agaagacaggtatatcaccaacatcatgtcgtttgttttcactgcaaaggctttaattag 890

                                                                        
Query: 447  ctcatttacgttgagattggggagcagattaaacacatcctgcaagtggtacaaaatctc 506
            |||||||||||| | ||| || || |||||||| ||||||||||| ||||||||||| ||
Sbjct: 889  ctcatttacgttcaaatttggaaggagattaaagacatcctgcaaatggtacaaaatttc 830

                                                                        
Query: 507  gtggttcagtgggagcttcccttcaattacaagatctagataaccccggatctccgtaag 566
            ||| ||||||||||||||||| |||||||||||||| | ||| |  ||||||||| ||||
Sbjct: 829  gtgattcagtgggagcttcccgtcaattacaagatccaaatagcttcggatctccctaag 770

                                                                        
Query: 567  cctcgcatcaagtcccttcagggcagcaagcttgctgctgacctctgttgcaagtgtgct 626
            ||| ||||| |||||||| | ||| |||||||||||  |||||||||| |||||||||||
Sbjct: 769  ccttgcatcgagtccctttaaggctgcaagcttgctagtgacctctgtagcaagtgtgct 710

                                                                        
Query: 627  tattgttgtgtctttcacatccctcagaaggtgctcaactccgatttcctcaacttcatg 686
            |||||||||||| || |||||||| |||||||| |||||||| |||||||||||||||||
Sbjct: 709  tattgttgtgtccttgacatcccttagaaggtgttcaactccaatttcctcaacttcatg 650

                                                                        
Query: 687  agcagcaatttctgatggcacgtggacgaacaccttttgacttttctgagtagcattctc 746
            ||| ||||||||||| || || ||||| || ||||| |||||||||||||| ||||||||
Sbjct: 649  agctgcaatttctgaaggaacatggacaaataccttctgacttttctgagttgcattctc 590
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>gb|AY111094.1| Zea mays CL9802_1 mRNA sequence
          Length = 747

 Score =  391 bits (197), Expect = e-105
 Identities = 366/423 (86%)
 Strand = Plus / Plus

                                                                       
Query: 267 cgtttagctcccggctgccgtaggtatggcggctggcttcgaatcctcggccttctcatg 326
           ||||||||| ||||| || ||||| ||||||| ||| |||||||||||||||||||| ||
Sbjct: 323 cgtttagcttccggcagcagtaggaatggcggttggtttcgaatcctcggccttctcgtg 382

                                                                       
Query: 327 ctccttgtttagcatcttgttgttgatcaaattgtggagagcgatgacactccggataag 386
           |||||||||||||||||| |||||||| |||||||| || || ||||| |||||||| ||
Sbjct: 383 ctccttgtttagcatcttattgttgattaaattgtgaagcgcaatgacgctccggatcag 442

                                                                       
Query: 387 ggaagacaggtatatgaccagcatcatatcatttgttttcactgcaaaggctttaatgag 446
            |||||||||||||| |||| |||||| || |||||||||||||||||||||||||| ||
Sbjct: 443 agaagacaggtatatcaccaacatcatgtcgtttgttttcactgcaaaggctttaattag 502

                                                                       
Query: 447 ctcatttacgttgagattggggagcagattaaacacatcctgcaagtggtacaaaatctc 506
           |||||||||||| | ||| || || |||||||| ||||||||||| ||||||||||| ||
Sbjct: 503 ctcatttacgttcaaatttggaaggagattaaagacatcctgcaaatggtacaaaatttc 562

                                                                       
Query: 507 gtggttcagtgggagcttcccttcaattacaagatctagataaccccggatctccgtaag 566
           ||| ||||||||||||||||| |||||||||||||| | ||| |  ||||||||| ||||
Sbjct: 563 gtgattcagtgggagcttcccgtcaattacaagatccaaatagcttcggatctccctaag 622

                                                                       
Query: 567 cctcgcatcaagtcccttcagggcagcaagcttgctgctgacctctgttgcaagtgtgct 626
           ||| ||||| |||||||| | ||| |||||||||||   ||||||||| ||||| || ||
Sbjct: 623 ccttgcatcgagtccctttaaggctgcaagcttgctagggacctctgtagcaagggttct 682

                                                                       
Query: 627 tattgttgtgtctttcacatccctcagaaggtgctcaactccgatttcctcaacttcatg 686
           ||||| |||||| || |||||||| |  | | | |||||||| |||||||||||||||||
Sbjct: 683 tattggtgtgtccttgacatcccttannaagggttcaactccaatttcctcaacttcatg 742

              
Query: 687 agc 689
           |||
Sbjct: 743 agc 745
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>gb|DQ222517.1| Solanum tuberosum clone 119G03 unknown mRNA
          Length = 1191

 Score =  151 bits (76), Expect = 4e-33
 Identities = 214/260 (82%)
 Strand = Plus / Minus

                                                                       
Query: 301 ggcttcgaatcctcggccttctcatgctccttgtttagcatcttgttgttgatcaaattg 360
           |||||||||||||| ||||| || || |||||||| |||||||||||||||||||| || 
Sbjct: 902 ggcttcgaatcctcagccttttcgtgttccttgttaagcatcttgttgttgatcaagtta 843

                                                                       
Query: 361 tggagagcgatgacactccggataagggaagacaggtatatgaccagcatcatatcattt 420
           |||||||| || ||||| |||||||| ||||| || |||||||||| |||||||||||| 
Sbjct: 842 tggagagcaattacacttcggataagtgaagatagatatatgaccaacatcatatcattc 783

                                                                       
Query: 421 gttttcactgcaaaggctttaatgagctcatttacgttgagattggggagcagattaaac 480
           |||||||||| ||| | ||| |  |  |||   || || |||||||| |  ||||| || 
Sbjct: 782 gttttcactgaaaatgattttactaattcagcaacatttagattgggtaatagattgaaa 723

                                                                       
Query: 481 acatcctgcaagtggtacaaaatctcgtggttcagtgggagcttcccttcaattacaaga 540
           ||||||||||| ||||| | |||||| |||||||  ||||||||||| ||||| |||| |
Sbjct: 722 acatcctgcaaatggtatagaatctcatggttcaaggggagcttcccatcaatgacaaca 663

                               
Query: 541 tctagataaccccggatctc 560
           || | ||||| ||| |||||
Sbjct: 662 tccaaataactccgtatctc 643



 Score =  111 bits (56), Expect = 3e-21
 Identities = 119/140 (85%)
 Strand = Plus / Minus

                                                                       
Query: 607 acctctgttgcaagtgtgcttattgttgtgtctttcacatccctcagaaggtgctcaact 666
           ||||| |||||||| || || || ||||| |||||||||||||| || | ||||||||| 
Sbjct: 596 acctcagttgcaagggtactgatagttgtatctttcacatcccttagcaagtgctcaaca 537

                                                                       
Query: 667 ccgatttcctcaacttcatgagcagcaatttctgatggcacgtggacgaacaccttttga 726
           |||||||| ||||||||||||||||| |||||||| || || || || ||||| || || 
Sbjct: 536 ccgatttcttcaacttcatgagcagcgatttctgaaggtacatgcacaaacacattctgg 477

                               
Query: 727 cttttctgagtagcattctc 746
           ||||||||||| ||||||||
Sbjct: 476 cttttctgagttgcattctc 457
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>ref|NM_120660.2| Arabidopsis thaliana ATHMOV34 AT5G05780 (ATHMOV34) mRNA, complete
           cds
          Length = 1372

 Score =  133 bits (67), Expect = 9e-28
 Identities = 210/255 (82%), Gaps = 2/255 (0%)
 Strand = Plus / Minus

                                                                       
Query: 493 tggtacaaaatctcgtggttcagtgggagcttcccttcaattacaagatctagataaccc 552
           ||||| |||||||| ||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 839 tggtataaaatctcatggtttagagggagctttccttcgattacaaggtcaagataactc 780

                                                                       
Query: 553 cggatctccgtaagcctcgcatcaagtcccttcagggcagcaagctt-gctgctgacctc 611
           |||||||||  ||| |  ||||| |  |||||||  |||| ||| || || | |||||||
Sbjct: 779 cggatctcccgaagacgtgcatccaaccccttcaaagcagtaagttttgcag-tgacctc 721

                                                                       
Query: 612 tgttgcaagtgtgcttattgttgtgtctttcacatccctcagaaggtgctcaactccgat 671
            || || || || || ||||||||||||||||||||||| || |  ||||| || |||||
Sbjct: 720 agtcgcgagggtactgattgttgtgtctttcacatccctgagcaaatgctccacgccgat 661

                                                                       
Query: 672 ttcctcaacttcatgagcagcaatttctgatggcacgtggacgaacaccttttgactttt 731
           |||||||||||||||||||||||||||||  | ||| || ||||| || || || |||||
Sbjct: 660 ttcctcaacttcatgagcagcaatttctgtagacacatgaacgaaaactttctggctttt 601

                          
Query: 732 ctgagtagcattctc 746
           |||||||||||||||
Sbjct: 600 ctgagtagcattctc 586



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 116/141 (82%)
 Strand = Plus / Minus

                                                                        
Query: 288  aggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgtt 347
            |||||||||  | ||||| || ||||| || || ||||| |||||||| || | ||||||
Sbjct: 1044 aggtatggccacaggctttgagtcctctgctttttcatgttccttgttcagtaacttgtt 985

                                                                        
Query: 348  gttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgaccag 407
            ||||||||| |||||||| || || |||||||| || ||||| || || || || || ||
Sbjct: 984  gttgatcaagttgtggagcgcaattacactccgaatgagggatgatagatagataacgag 925

                                 
Query: 408  catcatatcatttgttttcac 428
            |||||| ||||||||||||||
Sbjct: 924  catcatgtcatttgttttcac 904
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>gb|AY230840.1| Arabidopsis thaliana 26S proteasome subunit RPN8a (RPN8a) mRNA,
           RPN8a-2 allele, complete cds
          Length = 932

 Score =  133 bits (67), Expect = 9e-28
 Identities = 210/255 (82%), Gaps = 2/255 (0%)
 Strand = Plus / Minus

                                                                       
Query: 493 tggtacaaaatctcgtggttcagtgggagcttcccttcaattacaagatctagataaccc 552
           ||||| |||||||| ||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 710 tggtataaaatctcatggtttagagggagctttccttcgattacaaggtcaagataactc 651

                                                                       
Query: 553 cggatctccgtaagcctcgcatcaagtcccttcagggcagcaagctt-gctgctgacctc 611
           |||||||||  ||| |  ||||| |  |||||||  |||| ||| || || | |||||||
Sbjct: 650 cggatctcccgaagacgtgcatccaaccccttcaaagcagtaagttttgcag-tgacctc 592

                                                                       
Query: 612 tgttgcaagtgtgcttattgttgtgtctttcacatccctcagaaggtgctcaactccgat 671
            || || || || || ||||||||||||||||||||||| || |  ||||| || |||||
Sbjct: 591 agtcgcgagggtactgattgttgtgtctttcacatccctgagcaaatgctccacgccgat 532

                                                                       
Query: 672 ttcctcaacttcatgagcagcaatttctgatggcacgtggacgaacaccttttgactttt 731
           |||||||||||||||||||||||||||||  | ||| || ||||| || || || |||||
Sbjct: 531 ttcctcaacttcatgagcagcaatttctgtagacacatgaacgaaaactttctggctttt 472

                          
Query: 732 ctgagtagcattctc 746
           |||||||||||||||
Sbjct: 471 ctgagtagcattctc 457



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 116/141 (82%)
 Strand = Plus / Minus

                                                                       
Query: 288 aggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgtt 347
           |||||||||  | ||||| || ||||| || || ||||| |||||||| || | ||||||
Sbjct: 915 aggtatggccacaggctttgagtcctctgctttttcatgttccttgttcagtaacttgtt 856

                                                                       
Query: 348 gttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgaccag 407
           ||||||||| |||||||| || || |||||||| || ||||| || || || || || ||
Sbjct: 855 gttgatcaagttgtggagcgcaattacactccgaatgagggatgatagatagataacgag 796

                                
Query: 408 catcatatcatttgttttcac 428
           |||||| ||||||||||||||
Sbjct: 795 catcatgtcatttgttttcac 775
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>gb|AF378878.1|AF378878 Arabidopsis thaliana AT5g05780/MJJ3_19 mRNA, complete cds
          Length = 1367

 Score =  133 bits (67), Expect = 9e-28
 Identities = 210/255 (82%), Gaps = 2/255 (0%)
 Strand = Plus / Minus

                                                                       
Query: 493 tggtacaaaatctcgtggttcagtgggagcttcccttcaattacaagatctagataaccc 552
           ||||| |||||||| ||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 838 tggtataaaatctcatggtttagagggagctttccttcgattacaaggtcaagataactc 779

                                                                       
Query: 553 cggatctccgtaagcctcgcatcaagtcccttcagggcagcaagctt-gctgctgacctc 611
           |||||||||  ||| |  ||||| |  |||||||  |||| ||| || || | |||||||
Sbjct: 778 cggatctcccgaagacgtgcatccaaccccttcaaagcagtaagttttgcag-tgacctc 720

                                                                       
Query: 612 tgttgcaagtgtgcttattgttgtgtctttcacatccctcagaaggtgctcaactccgat 671
            || || || || || ||||||||||||||||||||||| || |  ||||| || |||||
Sbjct: 719 agtcgcgagggtactgattgttgtgtctttcacatccctgagcaaatgctccacgccgat 660

                                                                       
Query: 672 ttcctcaacttcatgagcagcaatttctgatggcacgtggacgaacaccttttgactttt 731
           |||||||||||||||||||||||||||||  | ||| || ||||| || || || |||||
Sbjct: 659 ttcctcaacttcatgagcagcaatttctgtagacacatgaacgaaaactttctggctttt 600

                          
Query: 732 ctgagtagcattctc 746
           |||||||||||||||
Sbjct: 599 ctgagtagcattctc 585



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 116/141 (82%)
 Strand = Plus / Minus

                                                                        
Query: 288  aggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgtt 347
            |||||||||  | ||||| || ||||| || || ||||| |||||||| || | ||||||
Sbjct: 1043 aggtatggccacaggctttgagtcctctgctttttcatgttccttgttcagtaacttgtt 984

                                                                        
Query: 348  gttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgaccag 407
            ||||||||| |||||||| || || |||||||| || ||||| || || || || || ||
Sbjct: 983  gttgatcaagttgtggagcgcaattacactccgaatgagggatgatagatagataacgag 924

                                 
Query: 408  catcatatcatttgttttcac 428
            |||||| ||||||||||||||
Sbjct: 923  catcatgtcatttgttttcac 903
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>gb|BT002610.1| Arabidopsis thaliana At5g05780/MJJ3_19 mRNA, complete cds
          Length = 927

 Score =  133 bits (67), Expect = 9e-28
 Identities = 210/255 (82%), Gaps = 2/255 (0%)
 Strand = Plus / Minus

                                                                       
Query: 493 tggtacaaaatctcgtggttcagtgggagcttcccttcaattacaagatctagataaccc 552
           ||||| |||||||| ||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 710 tggtataaaatctcatggtttagagggagctttccttcgattacaaggtcaagataactc 651

                                                                       
Query: 553 cggatctccgtaagcctcgcatcaagtcccttcagggcagcaagctt-gctgctgacctc 611
           |||||||||  ||| |  ||||| |  |||||||  |||| ||| || || | |||||||
Sbjct: 650 cggatctcccgaagacgtgcatccaaccccttcaaagcagtaagttttgcag-tgacctc 592

                                                                       
Query: 612 tgttgcaagtgtgcttattgttgtgtctttcacatccctcagaaggtgctcaactccgat 671
            || || || || || ||||||||||||||||||||||| || |  ||||| || |||||
Sbjct: 591 agtcgcgagggtactgattgttgtgtctttcacatccctgagcaaatgctccacgccgat 532

                                                                       
Query: 672 ttcctcaacttcatgagcagcaatttctgatggcacgtggacgaacaccttttgactttt 731
           |||||||||||||||||||||||||||||  | ||| || ||||| || || || |||||
Sbjct: 531 ttcctcaacttcatgagcagcaatttctgtagacacatgaacgaaaactttctggctttt 472

                          
Query: 732 ctgagtagcattctc 746
           |||||||||||||||
Sbjct: 471 ctgagtagcattctc 457



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 116/141 (82%)
 Strand = Plus / Minus

                                                                       
Query: 288 aggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgtt 347
           |||||||||  | ||||| || ||||| || || ||||| |||||||| || | ||||||
Sbjct: 915 aggtatggccacaggctttgagtcctctgctttttcatgttccttgttcagtaacttgtt 856

                                                                       
Query: 348 gttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgaccag 407
           ||||||||| |||||||| || || |||||||| || ||||| || || || || || ||
Sbjct: 855 gttgatcaagttgtggagcgcaattacactccgaatgagggatgatagatagataacgag 796

                                
Query: 408 catcatatcatttgttttcac 428
           |||||| ||||||||||||||
Sbjct: 795 catcatgtcatttgttttcac 775
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>gb|AY230839.1| Arabidopsis thaliana 26S proteasome subunit RPN8a (RPN8a) mRNA,
           RPN8a-1 allele, complete cds
          Length = 1314

 Score =  125 bits (63), Expect = 2e-25
 Identities = 209/255 (81%), Gaps = 2/255 (0%)
 Strand = Plus / Minus

                                                                       
Query: 493 tggtacaaaatctcgtggttcagtgggagcttcccttcaattacaagatctagataaccc 552
           ||||| |||||||| ||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 770 tggtataaaatctcatggtttagagggagctttccttcgattacaaggtcaagataactc 711

                                                                       
Query: 553 cggatctccgtaagcctcgcatcaagtcccttcagggcagcaagctt-gctgctgacctc 611
           |||||||||  ||| |  ||||| |  |||||||  |||| ||| || || | |||||||
Sbjct: 710 cggatctcccgaagacgtgcatccaaccccttcaaagcagtaagttttgcag-tgacctc 652

                                                                       
Query: 612 tgttgcaagtgtgcttattgttgtgtctttcacatccctcagaaggtgctcaactccgat 671
            || || || || || |||||||| |||||||||||||| || |  ||||| || |||||
Sbjct: 651 agtcgctagggtactgattgttgtatctttcacatccctgagcaaatgctccacgccgat 592

                                                                       
Query: 672 ttcctcaacttcatgagcagcaatttctgatggcacgtggacgaacaccttttgactttt 731
           |||||| ||||||||||||||||||||||  | |||||| ||||| || || || |||||
Sbjct: 591 ttcctcgacttcatgagcagcaatttctgtagacacgtgaacgaaaactttctggctttt 532

                          
Query: 732 ctgagtagcattctc 746
           |||||||||||||||
Sbjct: 531 ctgagtagcattctc 517



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 119/143 (83%)
 Strand = Plus / Minus

                                                                       
Query: 288 aggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgtt 347
           |||||||||  | ||||| || ||||| || || ||||| |||||||| || | ||||||
Sbjct: 975 aggtatggccacaggctttgagtcctctgctttttcatgttccttgttcagtaacttgtt 916

                                                                       
Query: 348 gttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgaccag 407
           ||||||||| |||||||| || || ||||||||||| ||||| || || || || || ||
Sbjct: 915 gttgatcaagttgtggagcgcaattacactccggatgagggatgatagatagataacgag 856

                                  
Query: 408 catcatatcatttgttttcactg 430
           |||||| ||||||||||||||||
Sbjct: 855 catcatgtcatttgttttcactg 833
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>emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K01,
             complete sequence
          Length = 163448

 Score =  125 bits (63), Expect = 2e-25
 Identities = 105/119 (88%)
 Strand = Plus / Minus

                                                                         
Query: 485   cctgcaagtggtacaaaatctcgtggttcagtgggagcttcccttcaattacaagatcta 544
             |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 25544 cctgcaagtggtacaaaatctcatgattcagtgggagcttcccttcaattacaagatcta 25485

                                                                        
Query: 545   gataaccccggatctccgtaagcctcgcatcaagtcccttcagggcagcaagcttgctg 603
               || || ||||||||| | ||||| || || ||||| |||| ||| ||||||||||||
Sbjct: 25484 agtacccacggatctccctgagccttgcgtccagtcctttcaaggctgcaagcttgctg 25426



 Score =  109 bits (55), Expect = 1e-20
 Identities = 82/91 (90%)
 Strand = Plus / Minus

                                                                         
Query: 342   cttgttgttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatat 401
             |||||| |||||||| || ||||| |||||||||||||||||||| ||||||| ||||||
Sbjct: 26367 cttgttattgatcaagttatggagtgcgatgacactccggataagagaagacaagtatat 26308

                                            
Query: 402   gaccagcatcatatcatttgttttcactgca 432
             ||||| ||||||||| |||||||| ||||||
Sbjct: 26307 gaccaacatcatatcgtttgttttaactgca 26277



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 55/57 (96%)
 Strand = Plus / Minus

                                                                      
Query: 287   taggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatct 343
             |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 26517 taggtatggcggttggcttcgaatcctcggctttctcatgctccttgtttagcatct 26461



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 58/61 (95%)
 Strand = Plus / Minus

                                                                         
Query: 428   ctgcaaaggctttaatgagctcatttacgttgagattggggagcagattaaacacatcct 487
             |||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 26181 ctgcaaaggctttaataagctcgtttacattgagattggggagcagattaaacacatcct 26122

              
Query: 488   g 488
             |
Sbjct: 26121 g 26121



 Score = 83.8 bits (42), Expect = 8e-13
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                         
Query: 607   acctctgttgcaagtgtgcttattgttgtgtctttcacatccctcagaaggtgctcaact 666
             |||||||| ||||| ||||||||||||||||| || |||||||||||||| |||||||||
Sbjct: 25336 acctctgtcgcaagcgtgcttattgttgtgtccttgacatccctcagaagatgctcaact 25277

               
Query: 667   cc 668
             ||
Sbjct: 25276 cc 25275



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 58/66 (87%), Gaps = 2/66 (3%)
 Strand = Plus / Minus

                                                                         
Query: 92    agctcacagaatgtaaggttttgtcgttgacctcgtcgcacatgaagtaaacatc-aaag 150
             |||||||||||||||| | |||| |||||||||  ||| ||||||| |||||||| ||||
Sbjct: 26698 agctcacagaatgtaaag-tttgccgttgaccttatcgtacatgaaataaacatcgaaag 26640

                   
Query: 151   tgtaaa 156
             ||||||
Sbjct: 26639 tgtaaa 26634



 Score = 50.1 bits (25), Expect = 0.011
 Identities = 69/81 (85%), Gaps = 2/81 (2%)
 Strand = Plus / Minus

                                                                         
Query: 667   ccgatttcctcaacttcatgagcagcaattt-ctgatggcacgtggacgaacaccttttg 725
             |||||||||||||| || || ||||| |||| |||| || || || || |||||||||||
Sbjct: 25066 ccgatttcctcaacctcgtgggcagctatttgctgaaggaacatgaacaaacaccttttg 25007

                                  
Query: 726   act-tttctgagtagcattct 745
             ||| ||| |||||||||||||
Sbjct: 25006 actgtttttgagtagcattct 24986



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 16    aatccgcatcaccaaacatgatgcgacacatgaaaca 52
             |||||||||||| |||||||||||  | |||||||||
Sbjct: 26780 aatccgcatcacaaaacatgatgcaccccatgaaaca 26744
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  125 bits (63), Expect = 2e-25
 Identities = 105/119 (88%)
 Strand = Plus / Minus

                                                                            
Query: 485      cctgcaagtggtacaaaatctcgtggttcagtgggagcttcccttcaattacaagatcta 544
                |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 33813645 cctgcaagtggtacaaaatctcatgattcagtgggagcttcccttcaattacaagatcta 33813586

                                                                           
Query: 545      gataaccccggatctccgtaagcctcgcatcaagtcccttcagggcagcaagcttgctg 603
                  || || ||||||||| | ||||| || || ||||| |||| ||| ||||||||||||
Sbjct: 33813585 agtacccacggatctccctgagccttgcgtccagtcctttcaaggctgcaagcttgctg 33813527



 Score =  109 bits (55), Expect = 1e-20
 Identities = 82/91 (90%)
 Strand = Plus / Minus

                                                                            
Query: 342      cttgttgttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatat 401
                |||||| |||||||| || ||||| |||||||||||||||||||| ||||||| ||||||
Sbjct: 33814468 cttgttattgatcaagttatggagtgcgatgacactccggataagagaagacaagtatat 33814409

                                               
Query: 402      gaccagcatcatatcatttgttttcactgca 432
                ||||| ||||||||| |||||||| ||||||
Sbjct: 33814408 gaccaacatcatatcgtttgttttaactgca 33814378



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 55/57 (96%)
 Strand = Plus / Minus

                                                                         
Query: 287      taggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatct 343
                |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 33814618 taggtatggcggttggcttcgaatcctcggctttctcatgctccttgtttagcatct 33814562



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 58/61 (95%)
 Strand = Plus / Minus

                                                                            
Query: 428      ctgcaaaggctttaatgagctcatttacgttgagattggggagcagattaaacacatcct 487
                |||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 33814282 ctgcaaaggctttaataagctcgtttacattgagattggggagcagattaaacacatcct 33814223

                 
Query: 488      g 488
                |
Sbjct: 33814222 g 33814222



 Score = 83.8 bits (42), Expect = 8e-13
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                            
Query: 607      acctctgttgcaagtgtgcttattgttgtgtctttcacatccctcagaaggtgctcaact 666
                |||||||| ||||| ||||||||||||||||| || |||||||||||||| |||||||||
Sbjct: 33813437 acctctgtcgcaagcgtgcttattgttgtgtccttgacatccctcagaagatgctcaact 33813378

                  
Query: 667      cc 668
                ||
Sbjct: 33813377 cc 33813376



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 58/66 (87%), Gaps = 2/66 (3%)
 Strand = Plus / Minus

                                                                            
Query: 92       agctcacagaatgtaaggttttgtcgttgacctcgtcgcacatgaagtaaacatc-aaag 150
                |||||||||||||||| | |||| |||||||||  ||| ||||||| |||||||| ||||
Sbjct: 33814799 agctcacagaatgtaaag-tttgccgttgaccttatcgtacatgaaataaacatcgaaag 33814741

                      
Query: 151      tgtaaa 156
                ||||||
Sbjct: 33814740 tgtaaa 33814735



 Score = 50.1 bits (25), Expect = 0.011
 Identities = 69/81 (85%), Gaps = 2/81 (2%)
 Strand = Plus / Minus

                                                                            
Query: 667      ccgatttcctcaacttcatgagcagcaattt-ctgatggcacgtggacgaacaccttttg 725
                |||||||||||||| || || ||||| |||| |||| || || || || |||||||||||
Sbjct: 33813167 ccgatttcctcaacctcgtgggcagctatttgctgaaggaacatgaacaaacaccttttg 33813108

                                     
Query: 726      act-tttctgagtagcattct 745
                ||| ||| |||||||||||||
Sbjct: 33813107 actgtttttgagtagcattct 33813087



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 16       aatccgcatcaccaaacatgatgcgacacatgaaaca 52
                |||||||||||| |||||||||||  | |||||||||
Sbjct: 33814881 aatccgcatcacaaaacatgatgcaccccatgaaaca 33814845
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>gb|AY087393.1| Arabidopsis thaliana clone 34868 mRNA, complete sequence
          Length = 1368

 Score =  125 bits (63), Expect = 2e-25
 Identities = 209/255 (81%), Gaps = 2/255 (0%)
 Strand = Plus / Minus

                                                                       
Query: 493 tggtacaaaatctcgtggttcagtgggagcttcccttcaattacaagatctagataaccc 552
           ||||| |||||||| ||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 839 tggtataaaatctcatggtttagagggagctttccttcgattacaaggtcaagataactc 780

                                                                       
Query: 553 cggatctccgtaagcctcgcatcaagtcccttcagggcagcaagctt-gctgctgacctc 611
           |||||||||  ||| |  ||||| |  |||||||  |||| ||| || || | |||||||
Sbjct: 779 cggatctcccgaagacgtgcatccaaccccttcaaagcagtaagttttgcag-tgacctc 721

                                                                       
Query: 612 tgttgcaagtgtgcttattgttgtgtctttcacatccctcagaaggtgctcaactccgat 671
            || || || || || |||||||| |||||||||||||| || |  ||||| || |||||
Sbjct: 720 agtcgctagggtactgattgttgtatctttcacatccctgagcaaatgctccacgccgat 661

                                                                       
Query: 672 ttcctcaacttcatgagcagcaatttctgatggcacgtggacgaacaccttttgactttt 731
           |||||| ||||||||||||||||||||||  | |||||| ||||| || || || |||||
Sbjct: 660 ttcctcgacttcatgagcagcaatttctgtagacacgtgaacgaaaactttctggctttt 601

                          
Query: 732 ctgagtagcattctc 746
           |||||||||||||||
Sbjct: 600 ctgagtagcattctc 586



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 119/143 (83%)
 Strand = Plus / Minus

                                                                        
Query: 288  aggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgtt 347
            |||||||||  | ||||| || ||||| || || ||||| |||||||| || | ||||||
Sbjct: 1044 aggtatggccacaggctttgagtcctctgctttttcatgttccttgttcagtaacttgtt 985

                                                                        
Query: 348  gttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgaccag 407
            ||||||||| |||||||| || || ||||||||||| ||||| || || || || || ||
Sbjct: 984  gttgatcaagttgtggagcgcaattacactccggatgagggatgatagatagataacgag 925

                                   
Query: 408  catcatatcatttgttttcactg 430
            |||||| ||||||||||||||||
Sbjct: 924  catcatgtcatttgttttcactg 902
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>gb|U54560.1|ATU54560 Arabidopsis thaliana putative 26S proteasome subunit athMOV34 mRNA,
           complete cds
          Length = 1357

 Score =  125 bits (63), Expect = 2e-25
 Identities = 209/255 (81%), Gaps = 2/255 (0%)
 Strand = Plus / Minus

                                                                       
Query: 493 tggtacaaaatctcgtggttcagtgggagcttcccttcaattacaagatctagataaccc 552
           ||||| |||||||| ||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 801 tggtataaaatctcatggtttagagggagctttccttcgattacaaggtcaagataactc 742

                                                                       
Query: 553 cggatctccgtaagcctcgcatcaagtcccttcagggcagcaagctt-gctgctgacctc 611
           |||||||||  ||| |  ||||| |  |||||||  |||| ||| || || | |||||||
Sbjct: 741 cggatctcccgaagacgtgcatccaaccccttcaaagcagtaagttttgcag-tgacctc 683

                                                                       
Query: 612 tgttgcaagtgtgcttattgttgtgtctttcacatccctcagaaggtgctcaactccgat 671
            || || || || || |||||||| |||||||||||||| || |  ||||| || |||||
Sbjct: 682 agtcgctagggtactgattgttgtatctttcacatccctgagcaaatgctccacgccgat 623

                                                                       
Query: 672 ttcctcaacttcatgagcagcaatttctgatggcacgtggacgaacaccttttgactttt 731
           |||||| ||||||||||||||||||||||  | |||||| ||||| || || || |||||
Sbjct: 622 ttcctcgacttcatgagcagcaatttctgtagacacgtgaacgaaaactttctggctttt 563

                          
Query: 732 ctgagtagcattctc 746
           |||||||||||||||
Sbjct: 562 ctgagtagcattctc 548



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 119/143 (83%)
 Strand = Plus / Minus

                                                                        
Query: 288  aggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgtt 347
            |||||||||  | ||||| || ||||| || || ||||| |||||||| || | ||||||
Sbjct: 1006 aggtatggccacaggctttgagtcctctgctttttcatgttccttgttcagtaacttgtt 947

                                                                        
Query: 348  gttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgaccag 407
            ||||||||| |||||||| || || ||||||||||| ||||| || || || || || ||
Sbjct: 946  gttgatcaagttgtggagcgcaattacactccggatgagggatgatagatagataacgag 887

                                   
Query: 408  catcatatcatttgttttcactg 430
            |||||| ||||||||||||||||
Sbjct: 886  catcatgtcatttgttttcactg 864
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>emb|BX830010.1|CNS0A09A Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB52ZG12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1302

 Score =  117 bits (59), Expect = 5e-23
 Identities = 104/119 (87%)
 Strand = Plus / Minus

                                                                       
Query: 628 attgttgtgtctttcacatccctcagaaggtgctcaactccgatttcctcaacttcatga 687
           ||||||||||||||||||||||| || |  ||||| || |||||||||||||||||||||
Sbjct: 683 attgttgtgtctttcacatccctgagcaaatgctccacgccgatttcctcaacttcatga 624

                                                                      
Query: 688 gcagcaatttctgatggcacgtggacgaacaccttttgacttttctgagtagcattctc 746
           |||||||||||||  | ||| || ||||| || || || ||||||||||||||||||||
Sbjct: 623 gcagcaatttctgtagacacatgaacgaaaactttctggcttttctgagtagcattctc 565



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 116/141 (82%)
 Strand = Plus / Minus

                                                                        
Query: 288  aggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgtt 347
            |||||||||  | ||||| || ||||| || || ||||| |||||||| || | ||||||
Sbjct: 1023 aggtatggccacaggctttgagtcctctgctttttcatgttccttgttcagtaacttgtt 964

                                                                        
Query: 348  gttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgaccag 407
            ||||||||| |||||||| || || |||||||| || ||||| || || || || || ||
Sbjct: 963  gttgatcaagttgtggagcgcaattacactccgaatgagggatgatagatagataacgag 904

                                 
Query: 408  catcatatcatttgttttcac 428
            |||||| ||||||||||||||
Sbjct: 903  catcatgtcatttgttttcac 883
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>ref|NM_111962.3| Arabidopsis thaliana unknown protein AT3G11270 mRNA, complete cds
          Length = 1417

 Score =  115 bits (58), Expect = 2e-22
 Identities = 121/142 (85%)
 Strand = Plus / Minus

                                                                        
Query: 301  ggcttcgaatcctcggccttctcatgctccttgtttagcatcttgttgttgatcaaattg 360
            ||||| || ||||| || || ||||| ||||| || | || |||||||||||||||| ||
Sbjct: 1001 ggctttgagtcctctgctttttcatgttccttattcaacaacttgttgttgatcaaactg 942

                                                                        
Query: 361  tggagagcgatgacactccggataagggaagacaggtatatgaccagcatcatatcattt 420
            ||||| ||||| ||||| |||||||| ||||| ||||| || || |||||||| ||||||
Sbjct: 941  tggagggcgattacacttcggataagcgaagaaaggtagattacgagcatcatgtcattt 882

                                  
Query: 421  gttttcactgcaaaggctttaa 442
            ||||| ||||||||||||||||
Sbjct: 881  gtttttactgcaaaggctttaa 860



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 98/116 (84%)
 Strand = Plus / Minus

                                                                       
Query: 631 gttgtgtctttcacatccctcagaaggtgctcaactccgatttcctcaacttcatgagca 690
           ||||||||||| |||||||| || |  || || || || |||||||||||||||||||| 
Sbjct: 671 gttgtgtcttttacatccctgagcaaatgttccacaccaatttcctcaacttcatgagct 612

                                                                   
Query: 691 gcaatttctgatggcacgtggacgaacaccttttgacttttctgagtagcattctc 746
           ||||||||||  |||||||| || || |||| ||| |||||||| |||||||||||
Sbjct: 611 gcaatttctgtaggcacgtgtacaaaaacctgttggcttttctgggtagcattctc 556
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>gb|AY258412.1| Arabidopsis thaliana 26S proteasome subunit RPN8b (RPN8b) mRNA,
           partial cds
          Length = 930

 Score =  115 bits (58), Expect = 2e-22
 Identities = 121/142 (85%)
 Strand = Plus / Minus

                                                                       
Query: 301 ggcttcgaatcctcggccttctcatgctccttgtttagcatcttgttgttgatcaaattg 360
           ||||| || ||||| || || ||||| ||||| || | || |||||||||||||||| ||
Sbjct: 902 ggctttgagtcctctgctttttcatgttccttattcaacaacttgttgttgatcaaactg 843

                                                                       
Query: 361 tggagagcgatgacactccggataagggaagacaggtatatgaccagcatcatatcattt 420
           ||||| ||||| ||||| |||||||| ||||| ||||| || || |||||||| ||||||
Sbjct: 842 tggagggcgattacacttcggataagcgaagaaaggtagattacgagcatcatgtcattt 783

                                 
Query: 421 gttttcactgcaaaggctttaa 442
           ||||| ||||||||||||||||
Sbjct: 782 gtttttactgcaaaggctttaa 761



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 98/116 (84%)
 Strand = Plus / Minus

                                                                       
Query: 631 gttgtgtctttcacatccctcagaaggtgctcaactccgatttcctcaacttcatgagca 690
           ||||||||||| |||||||| || |  || || || || |||||||||||||||||||| 
Sbjct: 572 gttgtgtcttttacatccctgagcaaatgttccacaccaatttcctcaacttcatgagct 513

                                                                   
Query: 691 gcaatttctgatggcacgtggacgaacaccttttgacttttctgagtagcattctc 746
           ||||||||||  |||||||| || || |||| ||| |||||||| |||||||||||
Sbjct: 512 gcaatttctgtaggcacgtgtacaaaaacctgttggcttttctgggtagcattctc 457
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>gb|AY639600.1| Lycopersicon pimpinellifolium orion Hcr9 gene cluster, complete
             sequence
          Length = 28951

 Score =  103 bits (52), Expect = 8e-19
 Identities = 82/92 (89%)
 Strand = Plus / Minus

                                                                         
Query: 342   cttgttgttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatat 401
             ||||||||||||||| || |||||||| || ||||| |||||||| ||||| || |||||
Sbjct: 28123 cttgttgttgatcaagttatggagagcaattacacttcggataagtgaagatagatatat 28064

                                             
Query: 402   gaccagcatcatatcatttgttttcactgcaa 433
             ||||| |||||||||||| |||||||||||||
Sbjct: 28063 gaccaacatcatatcattcgttttcactgcaa 28032



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                         
Query: 485   cctgcaagtggtacaaaatctcgtggttcagtgggagcttcccttcaattacaagatcta 544
             ||||||| ||||| | |||||| |||||||  ||||||||||| ||||| ||||||||||
Sbjct: 27266 cctgcaaatggtatagaatctcatggttcaaggggagcttcccatcaatgacaagatcta 27207

                             
Query: 545   gataaccccggatctc 560
              ||||| ||| |||||
Sbjct: 27206 aataactccgtatctc 27191



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                         
Query: 670   atttcctcaacttcatgagcagcaatttctgatggcacgtggacgaacaccttttgactt 729
             ||||| ||||||||||||||||| |||||||| || || || || ||||| || || |||
Sbjct: 26796 atttcttcaacttcatgagcagcgatttctgaaggtacatgcacaaacacattctggctt 26737

                             
Query: 730   ttctgagtagcattct 745
             |||||||| |||||||
Sbjct: 26736 ttctgagttgcattct 26721
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>emb|BX833880.1|CNS09Z77 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL81ZD09 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1265

 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 101/119 (84%)
 Strand = Plus / Minus

                                                                       
Query: 628 attgttgtgtctttcacatccctcagaaggtgctcaactccgatttcctcaacttcatga 687
           |||||||| |||||||||||||| || |  ||||| || |||||||||||||||||||||
Sbjct: 680 attgttgtttctttcacatccctgagcaaatgctccacgccgatttcctcaacttcatga 621

                                                                      
Query: 688 gcagcaatttctgatggcacgtggacgaacaccttttgacttttctgagtagcattctc 746
           |||||||||||||     || || ||||| || || || ||||||||||||||||||||
Sbjct: 620 gcagcaatttctgtaaaaacatgaacgaaaactttctggcttttctgagtagcattctc 562



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 90/107 (84%)
 Strand = Plus / Minus

                                                                       
Query: 322 tcatgctccttgtttagcatcttgttgttgatcaaattgtggagagcgatgacactccgg 381
           ||||| |||||||| || | ||||||||||||||| |||||||| || || |||||||| 
Sbjct: 986 tcatgttccttgttcagtaacttgttgttgatcaagttgtggagcgcaattacactccga 927

                                                          
Query: 382 ataagggaagacaggtatatgaccagcatcatatcatttgttttcac 428
           || ||||| || || || || || |||||||| ||||||||||||||
Sbjct: 926 atgagggatgatagatagataacgagcatcatgtcatttgttttcac 880
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>gb|AC073395.6|AC073395 Arabidopsis thaliana chromosome 3 BAC F11B9 genomic sequence, complete
             sequence
          Length = 103517

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                         
Query: 342   cttgttgttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatat 401
             |||||||||||||||| ||||||| ||||| ||||| |||||||| ||||| ||||| ||
Sbjct: 68309 cttgttgttgatcaaactgtggagggcgattacacttcggataagcgaagaaaggtagat 68250

                                          
Query: 402   gaccagcatcatatcatttgttttcactg 430
              || |||||||| ||||||||||| ||||
Sbjct: 68249 tacgagcatcatgtcatttgtttttactg 68221



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                         
Query: 670   atttcctcaacttcatgagcagcaatttctgatggcacgtggacgaacaccttttgactt 729
             |||||||||||||||||||| ||||||||||  |||||||| || || |||| ||| |||
Sbjct: 67468 atttcctcaacttcatgagctgcaatttctgtaggcacgtgtacaaaaacctgttggctt 67409

                             
Query: 730   ttctgagtagcattct 745
             ||||| ||||||||||
Sbjct: 67408 ttctgggtagcattct 67393
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 100/119 (84%)
 Strand = Plus / Plus

                                                                           
Query: 485     cctgcaagtggtacaaaatctcgtggttcagtgggagcttcccttcaattacaagatcta 544
               |||||||||||||||||||||| || ||||||  ||||| ||||| ||||||||||||||
Sbjct: 9599422 cctgcaagtggtacaaaatctcatgattcagtccgagctgcccttaaattacaagatcta 9599481

                                                                          
Query: 545     gataaccccggatctccgtaagcctcgcatcaagtcccttcagggcagcaagcttgctg 603
                 || |  ||||||||  | |||||||| || ||||| |||| ||| ||||||||||||
Sbjct: 9599482 agtacctacggatctctctgagcctcgcgtccagtcctttcaaggctgcaagcttgctg 9599540



 Score = 83.8 bits (42), Expect = 8e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                           
Query: 607     acctctgttgcaagtgtgcttattgttgtgtctttcacatccctcagaaggtgctcaact 666
               |||||||||||||| |||| |||||||||||| || |||||| |||||||||||||||||
Sbjct: 9599630 acctctgttgcaagcgtgcctattgttgtgtccttgacatccatcagaaggtgctcaact 9599689

                 
Query: 667     cc 668
               ||
Sbjct: 9599690 cc 9599691



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                           
Query: 670     atttcctcaacttcatgagcagcaatttctgatggcacgtggacgaacaccttttgactt 729
               ||||||||||| |  || ||||| |||||||| || || || || |||||||||| ||||
Sbjct: 9599904 atttcctcaacctagtgggcagctatttctgaaggaacatgaacaaacaccttttaactt 9599963

                               
Query: 730     ttctgagtagcattct 745
               ||||||||||||||||
Sbjct: 9599964 ttctgagtagcattct 9599979
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>dbj|AP006465.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1059D01
          Length = 158792

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 100/119 (84%)
 Strand = Plus / Plus

                                                                          
Query: 485    cctgcaagtggtacaaaatctcgtggttcagtgggagcttcccttcaattacaagatcta 544
              |||||||||||||||||||||| || ||||||  ||||| ||||| ||||||||||||||
Sbjct: 107152 cctgcaagtggtacaaaatctcatgattcagtccgagctgcccttaaattacaagatcta 107211

                                                                         
Query: 545    gataaccccggatctccgtaagcctcgcatcaagtcccttcagggcagcaagcttgctg 603
                || |  ||||||||  | |||||||| || ||||| |||| ||| ||||||||||||
Sbjct: 107212 agtacctacggatctctctgagcctcgcgtccagtcctttcaaggctgcaagcttgctg 107270



 Score = 83.8 bits (42), Expect = 8e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                          
Query: 607    acctctgttgcaagtgtgcttattgttgtgtctttcacatccctcagaaggtgctcaact 666
              |||||||||||||| |||| |||||||||||| || |||||| |||||||||||||||||
Sbjct: 107360 acctctgttgcaagcgtgcctattgttgtgtccttgacatccatcagaaggtgctcaact 107419

                
Query: 667    cc 668
              ||
Sbjct: 107420 cc 107421



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                          
Query: 670    atttcctcaacttcatgagcagcaatttctgatggcacgtggacgaacaccttttgactt 729
              ||||||||||| |  || ||||| |||||||| || || || || |||||||||| ||||
Sbjct: 107634 atttcctcaacctagtgggcagctatttctgaaggaacatgaacaaacaccttttaactt 107693

                              
Query: 730    ttctgagtagcattct 745
              ||||||||||||||||
Sbjct: 107694 ttctgagtagcattct 107709
to top
>dbj|AB005237.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJJ3
          Length = 87835

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 70/79 (88%)
 Strand = Plus / Minus

                                                                         
Query: 667   ccgatttcctcaacttcatgagcagcaatttctgatggcacgtggacgaacaccttttga 726
             ||||||||||||||||||||||||||||||||||  | ||| || ||||| || || || 
Sbjct: 57878 ccgatttcctcaacttcatgagcagcaatttctgtagacacatgaacgaaaactttctgg 57819

                                
Query: 727   cttttctgagtagcattct 745
             |||||||||||||||||||
Sbjct: 57818 cttttctgagtagcattct 57800



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 78/91 (85%)
 Strand = Plus / Minus

                                                                         
Query: 342   cttgttgttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatat 401
             ||||||||||||||| |||||||| || || |||||||| || ||||| || || || ||
Sbjct: 58752 cttgttgttgatcaagttgtggagcgcaattacactccgaatgagggatgatagatagat 58693

                                            
Query: 402   gaccagcatcatatcatttgttttcactgca 432
              || |||||||| ||||||||||||||||||
Sbjct: 58692 aacgagcatcatgtcatttgttttcactgca 58662



 Score = 46.1 bits (23), Expect = 0.17
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 628   attgttgtgtctttcacatccct 650
             |||||||||||||||||||||||
Sbjct: 58048 attgttgtgtctttcacatccct 58026
to top
>dbj|AP005834.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
           BAC clone:OSJNBa0005C24
          Length = 168151

 Score = 83.8 bits (42), Expect = 8e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                       
Query: 607 acctctgttgcaagtgtgcttattgttgtgtctttcacatccctcagaaggtgctcaact 666
           |||||||||||||| |||| |||||||||||| || |||||| |||||||||||||||||
Sbjct: 93  acctctgttgcaagcgtgcctattgttgtgtccttgacatccatcagaaggtgctcaact 152

             
Query: 667 cc 668
           ||
Sbjct: 153 cc 154



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                       
Query: 670 atttcctcaacttcatgagcagcaatttctgatggcacgtggacgaacaccttttgactt 729
           ||||||||||| |  || ||||| |||||||| || || || || |||||||||| ||||
Sbjct: 367 atttcctcaacctagtgggcagctatttctgaaggaacatgaacaaacaccttttaactt 426

                           
Query: 730 ttctgagtagcattct 745
           ||||||||||||||||
Sbjct: 427 ttctgagtagcattct 442
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>dbj|AK222016.1| Arabidopsis thaliana mRNA for 26S proteasome regulatory subunit
           S12, complete cds, clone: RAFL22-69-D21
          Length = 531

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 116/141 (82%)
 Strand = Plus / Minus

                                                                       
Query: 288 aggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgtt 347
           |||||||||  | ||||| || ||||| || || ||||| |||||||| || | ||||||
Sbjct: 322 aggtatggccacaggctttgagtcctctgctttttcatgttccttgttcagtaacttgtt 263

                                                                       
Query: 348 gttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgaccag 407
           ||||||||| |||||||| || || |||||||| || ||||| || || || || || ||
Sbjct: 262 gttgatcaagttgtggagcgcaattacactccgaatgagggatgatagatagataacgag 203

                                
Query: 408 catcatatcatttgttttcac 428
           |||||| ||||||||||||||
Sbjct: 202 catcatgtcatttgttttcac 182
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>ref|XM_804367.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053503593.30) partial mRNA
          Length = 2574

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 316 gccttctcatgctccttgttta 337
           ||||||||||||||||||||||
Sbjct: 992 gccttctcatgctccttgttta 971
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>ref|XM_811105.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053506127.150) partial mRNA
          Length = 2574

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 316 gccttctcatgctccttgttta 337
           ||||||||||||||||||||||
Sbjct: 992 gccttctcatgctccttgttta 971
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>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012
          Length = 2668010

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 652     agaaggtgctcaactccgatttcctc 677
               |||||||||||||| |||||||||||
Sbjct: 2599845 agaaggtgctcaacaccgatttcctc 2599820
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>ref|XM_749538.1| Aspergillus fumigatus Af293 nuclear exosome complex 3'-5'
           exonuclease subunit (Afu3g09880) partial mRNA
          Length = 2295

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 110 ttttgtcgttgacctcgtcgc 130
           |||||||||||||||||||||
Sbjct: 161 ttttgtcgttgacctcgtcgc 181
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>gb|AC156639.2| Mus musculus BAC clone RP23-301M11 from chromosome 9, complete
            sequence
          Length = 188292

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 638  ctttcacatccctcagaaggt 658
            |||||||||||||||||||||
Sbjct: 4160 ctttcacatccctcagaaggt 4140
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>gb|AY106142.1| Zea mays PCO072430 mRNA sequence
          Length = 554

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                        
Query: 133 atgaagtaaacatcaaagtgtaaattgaaggtcaagacacttggt 177
           ||||| ||||||||||| |||  ||| |||||||||||| |||||
Sbjct: 371 atgaaataaacatcaaaatgtccattcaaggtcaagacaattggt 327


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,247,983
Number of Sequences: 3902068
Number of extensions: 6247983
Number of successful extensions: 113737
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 113534
Number of HSP's gapped (non-prelim): 195
length of query: 746
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 723
effective length of database: 17,143,297,704
effective search space: 12394604239992
effective search space used: 12394604239992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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