Clone Name | rbasd21g02 |
---|---|
Clone Library Name | barley_pub |
>MCH1_YARLI (Q6CGU8) Probable transporter MCH1| Length = 486 Score = 44.3 bits (103), Expect = 2e-04 Identities = 33/129 (25%), Positives = 65/129 (50%), Gaps = 6/129 (4%) Frame = -1 Query: 564 ACVGHFLIAFGV------PQSLYAASVVIGFCFGAQWPLLFAIISEVFGLKYYSTLYNFG 403 AC+ H ++ G+ + ++V GF +G+ + L+ I+++V+G+ T++ Sbjct: 355 ACI-HLMVPSGIFTVFDNAKYFSVVTIVNGFSYGSSFTLVPTIVTKVWGIANLGTIWGSF 413 Query: 402 SVASPIGAYALNVRVAGYLYDVEAARQHGGTLDGAGDKTCIGVQCFKLAFLIITAVTVAG 223 +A +G+ + A +YD AA + G G+ + C GV C+ L F +IT +A Sbjct: 414 ILALAVGSLGYGLLFAK-VYD--AASEVGV---GSMSQVCSGVHCYGLTF-VITGTGLAF 466 Query: 222 ALVSLVLVW 196 A ++ +W Sbjct: 467 AAAAVFFIW 475
>MCH1_NEUCR (Q9P3K8) Probable transporter MCH1| Length = 598 Score = 38.1 bits (87), Expect = 0.017 Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 2/106 (1%) Frame = -1 Query: 525 QSLYAASVVIGFCFGAQWPLLFAIISEVFGLKYYSTLYNFGSVASPIGAYALN-VRVAGY 349 + + AS ++G +GA + L II+ ++G++ ++T + ++ +GA V A Y Sbjct: 478 ERFWVASGLVGAGYGAVFSLTPIIITVIWGVENFATNWGIVAMFPALGATFWGLVYSAVY 537 Query: 348 LYDVEAARQHGGTLDGAGDKTCIGVQCFKLAFLIITA-VTVAGALV 214 VE A +G G D+ C G +C+ AF + A V VA LV Sbjct: 538 QSGVEKAASNG--QGGEEDQFCYGSECYASAFWAMAASVWVACGLV 581
>OCTB1_DROME (Q9VCZ3) Octopamine receptor beta-1 (DmOct-beta-1R) (DmOA2)| Length = 508 Score = 35.8 bits (81), Expect = 0.086 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 2/76 (2%) Frame = -1 Query: 405 GSVASPIGAYALNVR--VAGYLYDVEAARQHGGTLDGAGDKTCIGVQCFKLAFLIITAVT 232 GS + A++V VAG D++A+ DG+ + V+CF + F+I+ A Sbjct: 64 GSAVGSGSSIAVSVEDVVAGQAQDIQASEGSTDDADGSSHLALVFVKCFIIGFIILAA-- 121 Query: 231 VAGALVSLVLVWRTRK 184 + G ++ +V V R RK Sbjct: 122 ILGNMLVIVSVMRHRK 137
>MUC4_HUMAN (Q99102) Mucin-4 (Tracheobronchial mucin) (Fragment)| Length = 610 Score = 34.3 bits (77), Expect = 0.25 Identities = 42/141 (29%), Positives = 58/141 (41%), Gaps = 3/141 (2%) Frame = +2 Query: 71 PVDRT*SSQPLHYSFLPLTALDSPSASLNLA*MSLR*NLRVRQTSTSETSAPATVTAVMM 250 PV T S+ H + LP+T D+ SAS A L V TS++ T + Sbjct: 477 PVTDTSSASTGHATPLPVT--DTSSASTGHATPLL-----VTDTSSASTGHTTPLHVTSP 529 Query: 251 RKASLKHCTPMQVLSPAPSSVPPCCLAASTS*RYPATRTLSA---YAPMGLATDPKL*SV 421 AS H TP+ V SP+ +S S + P T T SA +A L TD S Sbjct: 530 SSASTGHATPLPVTSPSSAS-------TSHATSLPVTDTSSASTGHATPLLVTDTSSAST 582 Query: 422 E*YLSPNTSEMMAKSSGHCAP 484 ++ + S+GH P Sbjct: 583 GHATPLLVTDTSSASTGHATP 603
>PHT19_ARATH (Q9S735) Inorganic phosphate transporter 1-9 (AtPht1;9) (H(+)/Pi| cotransporter) Length = 532 Score = 33.5 bits (75), Expect = 0.43 Identities = 28/91 (30%), Positives = 43/91 (47%) Frame = -1 Query: 462 FAIISEVFGLKYYSTLYNFGSVASPIGAYALNVRVAGYLYDVEAARQHGGTLDGAGDKTC 283 F I +E+F ++ ST + A GA V G+L+ A R H DG D Sbjct: 425 FIIPAELFPARFRSTCHGISGAAGKFGAI---VGTVGFLW---ATRHHEE--DGFPD--- 473 Query: 282 IGVQCFKLAFLIITAVTVAGALVSLVLVWRT 190 V+ ++AFLI+ V +AG +V+ + T Sbjct: 474 --VKRVRIAFLILGGVCIAGMIVTYLFTRET 502
>HUNB_DROLI (O46244) Protein hunchback (Fragments)| Length = 198 Score = 31.2 bits (69), Expect = 2.1 Identities = 21/68 (30%), Positives = 30/68 (44%) Frame = +2 Query: 116 LPLTALDSPSASLNLA*MSLR*NLRVRQTSTSETSAPATVTAVMMRKASLKHCTPMQVLS 295 L L L +P S+ LA NLR T+T+ T+ PA +L+ +Q L+ Sbjct: 106 LMLPGLPNPMQSIMLA------NLRPSPTTTTTTTTPAAAPTTTAATIALQANDKLQALT 159 Query: 296 PAPSSVPP 319 P PP Sbjct: 160 PPMDVTPP 167
>HUNB_DRODS (O46240) Protein hunchback (Fragments)| Length = 198 Score = 31.2 bits (69), Expect = 2.1 Identities = 21/68 (30%), Positives = 30/68 (44%) Frame = +2 Query: 116 LPLTALDSPSASLNLA*MSLR*NLRVRQTSTSETSAPATVTAVMMRKASLKHCTPMQVLS 295 L L L +P S+ LA NLR T+T+ T+ PA +L+ +Q L+ Sbjct: 106 LMLPGLPNPMQSIMLA------NLRPSPTATTTTTTPAAAPTTTAAAIALQANDKLQALT 159 Query: 296 PAPSSVPP 319 P PP Sbjct: 160 PPMDVTPP 167
>YM30_YEAST (Q03795) Hypothetical 60.0 kDa protein in IMP1-HLJ1 intergenic| region Length = 547 Score = 31.2 bits (69), Expect = 2.1 Identities = 29/117 (24%), Positives = 53/117 (45%) Frame = -1 Query: 525 QSLYAASVVIGFCFGAQWPLLFAIISEVFGLKYYSTLYNFGSVASPIGAYALNVRVAGYL 346 +++ S + G+ FG + +I+++ FG YSTL+ V + G ++++V Sbjct: 434 KNISVCSAIFGYSFGVLFGTFPSIVADRFGTNGYSTLW---GVLTTGGVFSVSVFTDILG 490 Query: 345 YDVEAARQHGGTLDGAGDKTCIGVQCFKLAFLIITAVTVAGALVSLVLVWRTRKFYR 175 D +A + G DG K GV C+ F++ L L ++ T +YR Sbjct: 491 RDFKA---NTGDDDGNCKK---GVLCYSYTFMVTKYCAAFNLLFVLGIIGYT--YYR 539
>ATL2F_ARATH (O64762) Putative RING-H2 finger protein ATL2F| Length = 302 Score = 30.8 bits (68), Expect = 2.8 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 7/63 (11%) Frame = -1 Query: 276 VQCFKLAFLIITAVTVAGALVSLVLV---WRTRKFYRSDIYAKFRDADGES----SAVNG 118 ++ L L+IT + A +V L V W +R+FY + F D+D ES +AV G Sbjct: 8 IKASDLTLLVITIILFAIFIVGLASVCFRWTSRQFYSQESINPFTDSDVESRTSITAVRG 67 Query: 117 RKE 109 E Sbjct: 68 LDE 70
>PHT18_ARATH (Q9SYQ1) Inorganic phosphate transporter 1-8 (AtPht1;8) (H(+)/Pi| cotransporter) Length = 534 Score = 30.4 bits (67), Expect = 3.6 Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 2/100 (2%) Frame = -1 Query: 504 VVIGFCFGAQWPLLFAIISEVFGLKYYSTLYNFGSVASPIGAYALNVRVAGYLYDVEAAR 325 +V FC F I +E F ++ ST + A +GA V G+L+ + Sbjct: 401 LVFFFCNFGPNTTTFIIPAEHFPARFRSTCHGISGAAGKLGAI---VGTVGFLWATKKME 457 Query: 324 QHGGTLDGAGDKTCI--GVQCFKLAFLIITAVTVAGALVS 211 + DK I V ++AFLI+ V +AG LV+ Sbjct: 458 --------SDDKNQIYPEVNRMRIAFLILGGVCIAGILVT 489
>MAZ_MOUSE (P56671) Myc-associated zinc finger protein (MAZI) (Purine-binding| transcription factor) (Pur-1) Length = 477 Score = 30.4 bits (67), Expect = 3.6 Identities = 27/117 (23%), Positives = 48/117 (41%), Gaps = 3/117 (2%) Frame = +2 Query: 68 PPVDRT*SSQPLHYSFLPLTALDSPSASLNLA*MSLR*NLRVRQTSTSETSAPATVTAVM 247 PP + +++PL LP+ A SA+ A + T+ +A +TV Sbjct: 70 PPTPQAPAAEPLQVDLLPVLAAAQESAAAAAAAAAAA---AAVVTAPPAPAAASTVDTAA 126 Query: 248 MRKASLKHCTPMQVLSPAPSSVPPCC---LAASTS*RYPATRTLSAYAPMGLATDPK 409 +++ P V +PA + PP +AA+ + A + A AP+ + K Sbjct: 127 LKQPPAPPPPPPAVSAPAAEAAPPAAAATIAAAAATAVVAPTSTVAVAPVASVLEKK 183
>MAZ_MESAU (P56670) Myc-associated zinc finger protein (MAZI) (Purine-binding| transcription factor) (Pur-1) (Fragment) Length = 331 Score = 30.4 bits (67), Expect = 3.6 Identities = 27/117 (23%), Positives = 48/117 (41%), Gaps = 3/117 (2%) Frame = +2 Query: 68 PPVDRT*SSQPLHYSFLPLTALDSPSASLNLA*MSLR*NLRVRQTSTSETSAPATVTAVM 247 PP + +++PL LP+ A SA+ A + T+ +A +TV Sbjct: 57 PPTPQAPAAEPLQVDLLPVLAAAQESAAAAAAAAAAA---AAVVTAPPAPAAASTVDTAA 113 Query: 248 MRKASLKHCTPMQVLSPAPSSVPPCC---LAASTS*RYPATRTLSAYAPMGLATDPK 409 +++ P V +PA + PP +AA+ + A + A AP+ + K Sbjct: 114 LKQPPAPPPPPPAVSAPAAEAAPPAAAATIAAAAATAVVAPTSTVAVAPVASVLEKK 170
>MAZ_HUMAN (P56270) Myc-associated zinc finger protein (MAZI) (Purine-binding| transcription factor) (Pur-1) (ZF87) (ZIF87) Length = 477 Score = 30.0 bits (66), Expect = 4.7 Identities = 27/117 (23%), Positives = 48/117 (41%), Gaps = 3/117 (2%) Frame = +2 Query: 68 PPVDRT*SSQPLHYSFLPLTALDSPSASLNLA*MSLR*NLRVRQTSTSETSAPATVTAVM 247 PP + +++PL LP+ A SA+ A + + +A +TV Sbjct: 70 PPTPQAPAAEPLQVDLLPVLAAAQESAAAAAAAAAA---AAAVAAAPPAPAAASTVDTAA 126 Query: 248 MRKASLKHCTPMQVLSPAPSSVPP---CCLAASTS*RYPATRTLSAYAPMGLATDPK 409 +++ P V +PA + PP +AA+ + A + A AP+ A + K Sbjct: 127 LKQPPAPPPPPPPVSAPAAEAAPPASAATIAAAAATAVVAPTSTVAVAPVASALEKK 183
>PLSB_CUCSA (Q39639) Glycerol-3-phosphate acyltransferase, chloroplast| precursor (EC 2.3.1.15) (GPAT) Length = 470 Score = 29.6 bits (65), Expect = 6.1 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 11/88 (12%) Frame = +2 Query: 293 SPAPSSVPPCCLAASTS*RYP----------ATRTLSAYAPMGLA-TDPKL*SVE*YLSP 439 S PSS+PP L+ S S + ++ +L + P+ L T PKL S +L Sbjct: 15 SSVPSSLPPFSLSPSISLSFSRVSLPPSSSSSSSSLKLFLPLSLHFTPPKLSSPHSFLRF 74 Query: 440 NTSEMMAKSSGHCAPKQNPMTTDAA*SD 523 + S MA+ P TTD +D Sbjct: 75 SASRAMAELIQDKESAHTPSTTDVTRND 102
>OCLN_PONPY (Q5RFS5) Occludin| Length = 522 Score = 29.6 bits (65), Expect = 6.1 Identities = 25/87 (28%), Positives = 33/87 (37%) Frame = -1 Query: 426 YSTLYNFGSVASPIGAYALNVRVAGYLYDVEAARQHGGTLDGAGDKTCIGVQCFKLAFLI 247 Y T GS+ P G +GY Y +GG D K G AF Sbjct: 93 YGTSLLGGSIGYPYGGSGFGSYGSGYGYSYGYGYGYGGYTDPRAAK---GFMLAMAAFCF 149 Query: 246 ITAVTVAGALVSLVLVWRTRKFYRSDI 166 I A+ + V + RTR++Y S I Sbjct: 150 IAALVIFVTSVIRSEMSRTRRYYLSVI 176
>OCLN_HUMAN (Q16625) Occludin| Length = 522 Score = 29.6 bits (65), Expect = 6.1 Identities = 26/87 (29%), Positives = 33/87 (37%) Frame = -1 Query: 426 YSTLYNFGSVASPIGAYALNVRVAGYLYDVEAARQHGGTLDGAGDKTCIGVQCFKLAFLI 247 Y T GSV P G +GY Y +GG D K G AF Sbjct: 93 YGTSLLGGSVGYPYGGSGFGSYGSGYGYGYGYGYGYGGYTDPRAAK---GFMLAMAAFCF 149 Query: 246 ITAVTVAGALVSLVLVWRTRKFYRSDI 166 I A+ + V + RTR++Y S I Sbjct: 150 IAALVIFVTSVIRSEMSRTRRYYLSVI 176
>EDG1_RAT (P48303) Sphingosine 1-phosphate receptor Edg-1 (Sphingosine| 1-phosphate receptor 1) (S1P1) Length = 383 Score = 29.6 bits (65), Expect = 6.1 Identities = 10/39 (25%), Positives = 23/39 (58%) Frame = -1 Query: 279 GVQCFKLAFLIITAVTVAGALVSLVLVWRTRKFYRSDIY 163 G++ + F++I + + + L+ +W+T+KF+R Y Sbjct: 45 GIKLTSVVFILICCLIILENIFVLLTIWKTKKFHRPMYY 83
>HAK8_ORYSA (Q8VXB5) Putative potassium transporter 8 (OsHAK8)| Length = 793 Score = 29.3 bits (64), Expect = 8.0 Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Frame = -1 Query: 549 FLIAFGVPQSLYAASVVIGFCFGAQWPLLFAI-ISEVFGLKYYSTLYNF 406 FL+ FG ++LY ++ +I F GA P+L A+ + V + +Y+T+ + Sbjct: 455 FLLFFGSVEALYFSASLIKFLEGAWLPILLALFLMAVMLVWHYTTIKKY 503 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,697,375 Number of Sequences: 219361 Number of extensions: 976837 Number of successful extensions: 3941 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 3814 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3931 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4643056080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)