ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd21g02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_185037.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2175 Score = 422 bits (213), Expect = e-115 Identities = 328/366 (89%), Gaps = 3/366 (0%) Strand = Plus / Minus Query: 196 ccagacgagcacgagcgagacgagcgcgccggcgacggtgacggcggtgatgatgaggaa 255 ||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||| Sbjct: 1794 ccagacgagcacgagggagatgagcgcgccggcgacggtggcggcggtgatgatgaggaa 1735 Query: 256 ggcgagcttgaagcactgcacgccgatgcaggtcttgtcgccggcgccgtcgagcgtgcc 315 ||| | |||||||||||||||||| |||||||||||||||| ||| |||||| ||| Sbjct: 1734 ggccttcctgaagcactgcacgccgaggcaggtcttgtcgccg---ccggcgagcgagcc 1678 Query: 316 gccgtgctgcctggcggcctccacgtcgtagaggtaccccgcgacgcgcacgttgagcgc 375 ||||||||||||||| ||||| |||||||||||||| || |||||||| |||||||| | Sbjct: 1677 gccgtgctgcctggccgcctcgacgtcgtagaggtagccggcgacgcggacgttgaggac 1618 Query: 376 gtatgcgccgatggggcttgccacggatccgaagttgtagagcgtggagtagtacttgag 435 ||| ||||||| |||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 1617 gtaggcgccgacggggctcgccacggagccgaagttgtagagcgtggagtagtacttgag 1558 Query: 436 cccgaacacctcggagatgatggcgaagagcagcggccactgcgccccgaagcagaaccc 495 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1557 gccgaacacctcggagatgatggcgaagaggagcggccactgcgccccgaagcagaagcc 1498 Query: 496 gatgaccaccgacgccgcgtagagcgactgcggcacgccgaangcgatgagaaagtggcc 555 ||||| || || || |||||||| ||||||| |||||||| |||||||| | |||||| Sbjct: 1497 gatgatgacggaggcggcgtagagagactgcgcgacgccgaacgcgatgaggaggtggcc 1438 Query: 556 gacgca 561 |||||| Sbjct: 1437 gacgca 1432
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 422 bits (213), Expect = e-115 Identities = 328/366 (89%), Gaps = 3/366 (0%) Strand = Plus / Minus Query: 196 ccagacgagcacgagcgagacgagcgcgccggcgacggtgacggcggtgatgatgaggaa 255 ||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||| Sbjct: 33057941 ccagacgagcacgagggagatgagcgcgccggcgacggtggcggcggtgatgatgaggaa 33057882 Query: 256 ggcgagcttgaagcactgcacgccgatgcaggtcttgtcgccggcgccgtcgagcgtgcc 315 ||| | |||||||||||||||||| |||||||||||||||| ||| |||||| ||| Sbjct: 33057881 ggccttcctgaagcactgcacgccgaggcaggtcttgtcgccg---ccggcgagcgagcc 33057825 Query: 316 gccgtgctgcctggcggcctccacgtcgtagaggtaccccgcgacgcgcacgttgagcgc 375 ||||||||||||||| ||||| |||||||||||||| || |||||||| |||||||| | Sbjct: 33057824 gccgtgctgcctggccgcctcgacgtcgtagaggtagccggcgacgcggacgttgaggac 33057765 Query: 376 gtatgcgccgatggggcttgccacggatccgaagttgtagagcgtggagtagtacttgag 435 ||| ||||||| |||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 33057764 gtaggcgccgacggggctcgccacggagccgaagttgtagagcgtggagtagtacttgag 33057705 Query: 436 cccgaacacctcggagatgatggcgaagagcagcggccactgcgccccgaagcagaaccc 495 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 33057704 gccgaacacctcggagatgatggcgaagaggagcggccactgcgccccgaagcagaagcc 33057645 Query: 496 gatgaccaccgacgccgcgtagagcgactgcggcacgccgaangcgatgagaaagtggcc 555 ||||| || || || |||||||| ||||||| |||||||| |||||||| | |||||| Sbjct: 33057644 gatgatgacggaggcggcgtagagagactgcgcgacgccgaacgcgatgaggaggtggcc 33057585 Query: 556 gacgca 561 |||||| Sbjct: 33057584 gacgca 33057579 Score = 198 bits (100), Expect = 1e-47 Identities = 160/180 (88%) Strand = Plus / Plus Query: 340 gtcgtagaggtaccccgcgacgcgcacgttgagcgcgtatgcgccgatggggcttgccac 399 ||||||||||| || | |||||| |||||||| ||| | ||||| |||||| ||||| Sbjct: 26852751 gtcgtagaggtggccggtgacgcggacgttgaggatgtaggagccgacggggctcgccac 26852810 Query: 400 ggatccgaagttgtagagcgtggagtagtacttgagcccgaacacctcggagatgatggc 459 || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 26852811 ggcgccgaagttgtagagcgtggagtagtacttgaggccgaacacctcggagatgatggc 26852870 Query: 460 gaagagcagcggccactgcgccccgaagcagaacccgatgaccaccgacgccgcgtagag 519 ||| ||||||||||||||||| ||||||||||| |||| || |||||||||||||||||| Sbjct: 26852871 gaacagcagcggccactgcgcgccgaagcagaagccgaggatcaccgacgccgcgtagag 26852930 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 149 tccctgaacttggcgtagatgtcgctgcggtagaactt 186 |||||||||||| |||| | ||||| |||||||||||| Sbjct: 26852542 tccctgaacttgccgtacaggtcgccgcggtagaactt 26852579 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gacgagcgcgccggcgacgg 233 |||||||||||||||||||| Sbjct: 27289971 gacgagcgcgccggcgacgg 27289990
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 422 bits (213), Expect = e-115 Identities = 328/366 (89%), Gaps = 3/366 (0%) Strand = Plus / Minus Query: 196 ccagacgagcacgagcgagacgagcgcgccggcgacggtgacggcggtgatgatgaggaa 255 ||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||| Sbjct: 33148451 ccagacgagcacgagggagatgagcgcgccggcgacggtggcggcggtgatgatgaggaa 33148392 Query: 256 ggcgagcttgaagcactgcacgccgatgcaggtcttgtcgccggcgccgtcgagcgtgcc 315 ||| | |||||||||||||||||| |||||||||||||||| ||| |||||| ||| Sbjct: 33148391 ggccttcctgaagcactgcacgccgaggcaggtcttgtcgccg---ccggcgagcgagcc 33148335 Query: 316 gccgtgctgcctggcggcctccacgtcgtagaggtaccccgcgacgcgcacgttgagcgc 375 ||||||||||||||| ||||| |||||||||||||| || |||||||| |||||||| | Sbjct: 33148334 gccgtgctgcctggccgcctcgacgtcgtagaggtagccggcgacgcggacgttgaggac 33148275 Query: 376 gtatgcgccgatggggcttgccacggatccgaagttgtagagcgtggagtagtacttgag 435 ||| ||||||| |||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 33148274 gtaggcgccgacggggctcgccacggagccgaagttgtagagcgtggagtagtacttgag 33148215 Query: 436 cccgaacacctcggagatgatggcgaagagcagcggccactgcgccccgaagcagaaccc 495 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 33148214 gccgaacacctcggagatgatggcgaagaggagcggccactgcgccccgaagcagaagcc 33148155 Query: 496 gatgaccaccgacgccgcgtagagcgactgcggcacgccgaangcgatgagaaagtggcc 555 ||||| || || || |||||||| ||||||| |||||||| |||||||| | |||||| Sbjct: 33148154 gatgatgacggaggcggcgtagagagactgcgcgacgccgaacgcgatgaggaggtggcc 33148095 Query: 556 gacgca 561 |||||| Sbjct: 33148094 gacgca 33148089 Score = 198 bits (100), Expect = 1e-47 Identities = 160/180 (88%) Strand = Plus / Plus Query: 340 gtcgtagaggtaccccgcgacgcgcacgttgagcgcgtatgcgccgatggggcttgccac 399 ||||||||||| || | |||||| |||||||| ||| | ||||| |||||| ||||| Sbjct: 26944074 gtcgtagaggtggccggtgacgcggacgttgaggatgtaggagccgacggggctcgccac 26944133 Query: 400 ggatccgaagttgtagagcgtggagtagtacttgagcccgaacacctcggagatgatggc 459 || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 26944134 ggcgccgaagttgtagagcgtggagtagtacttgaggccgaacacctcggagatgatggc 26944193 Query: 460 gaagagcagcggccactgcgccccgaagcagaacccgatgaccaccgacgccgcgtagag 519 ||| ||||||||||||||||| ||||||||||| |||| || |||||||||||||||||| Sbjct: 26944194 gaacagcagcggccactgcgcgccgaagcagaagccgaggatcaccgacgccgcgtagag 26944253 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 149 tccctgaacttggcgtagatgtcgctgcggtagaactt 186 |||||||||||| |||| | ||||| |||||||||||| Sbjct: 26943865 tccctgaacttgccgtacaggtcgccgcggtagaactt 26943902 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gacgagcgcgccggcgacgg 233 |||||||||||||||||||| Sbjct: 27381294 gacgagcgcgccggcgacgg 27381313
>gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genomic sequence, complete sequence Length = 139823 Score = 422 bits (213), Expect = e-115 Identities = 328/366 (89%), Gaps = 3/366 (0%) Strand = Plus / Plus Query: 196 ccagacgagcacgagcgagacgagcgcgccggcgacggtgacggcggtgatgatgaggaa 255 ||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||| Sbjct: 65367 ccagacgagcacgagggagatgagcgcgccggcgacggtggcggcggtgatgatgaggaa 65426 Query: 256 ggcgagcttgaagcactgcacgccgatgcaggtcttgtcgccggcgccgtcgagcgtgcc 315 ||| | |||||||||||||||||| |||||||||||||||| ||| |||||| ||| Sbjct: 65427 ggccttcctgaagcactgcacgccgaggcaggtcttgtcgccg---ccggcgagcgagcc 65483 Query: 316 gccgtgctgcctggcggcctccacgtcgtagaggtaccccgcgacgcgcacgttgagcgc 375 ||||||||||||||| ||||| |||||||||||||| || |||||||| |||||||| | Sbjct: 65484 gccgtgctgcctggccgcctcgacgtcgtagaggtagccggcgacgcggacgttgaggac 65543 Query: 376 gtatgcgccgatggggcttgccacggatccgaagttgtagagcgtggagtagtacttgag 435 ||| ||||||| |||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 65544 gtaggcgccgacggggctcgccacggagccgaagttgtagagcgtggagtagtacttgag 65603 Query: 436 cccgaacacctcggagatgatggcgaagagcagcggccactgcgccccgaagcagaaccc 495 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 65604 gccgaacacctcggagatgatggcgaagaggagcggccactgcgccccgaagcagaagcc 65663 Query: 496 gatgaccaccgacgccgcgtagagcgactgcggcacgccgaangcgatgagaaagtggcc 555 ||||| || || || |||||||| ||||||| |||||||| |||||||| | |||||| Sbjct: 65664 gatgatgacggaggcggcgtagagagactgcgcgacgccgaacgcgatgaggaggtggcc 65723 Query: 556 gacgca 561 |||||| Sbjct: 65724 gacgca 65729
>dbj|AK068267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149D11, full insert sequence Length = 1363 Score = 422 bits (213), Expect = e-115 Identities = 328/366 (89%), Gaps = 3/366 (0%) Strand = Plus / Minus Query: 196 ccagacgagcacgagcgagacgagcgcgccggcgacggtgacggcggtgatgatgaggaa 255 ||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||| Sbjct: 1078 ccagacgagcacgagggagatgagcgcgccggcgacggtggcggcggtgatgatgaggaa 1019 Query: 256 ggcgagcttgaagcactgcacgccgatgcaggtcttgtcgccggcgccgtcgagcgtgcc 315 ||| | |||||||||||||||||| |||||||||||||||| ||| |||||| ||| Sbjct: 1018 ggccttcctgaagcactgcacgccgaggcaggtcttgtcgccg---ccggcgagcgagcc 962 Query: 316 gccgtgctgcctggcggcctccacgtcgtagaggtaccccgcgacgcgcacgttgagcgc 375 ||||||||||||||| ||||| |||||||||||||| || |||||||| |||||||| | Sbjct: 961 gccgtgctgcctggccgcctcgacgtcgtagaggtagccggcgacgcggacgttgaggac 902 Query: 376 gtatgcgccgatggggcttgccacggatccgaagttgtagagcgtggagtagtacttgag 435 ||| ||||||| |||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 901 gtaggcgccgacggggctcgccacggagccgaagttgtagagcgtggagtagtacttgag 842 Query: 436 cccgaacacctcggagatgatggcgaagagcagcggccactgcgccccgaagcagaaccc 495 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 841 gccgaacacctcggagatgatggcgaagaggagcggccactgcgccccgaagcagaagcc 782 Query: 496 gatgaccaccgacgccgcgtagagcgactgcggcacgccgaangcgatgagaaagtggcc 555 ||||| || || || |||||||| ||||||| |||||||| |||||||| | |||||| Sbjct: 781 gatgatgacggaggcggcgtagagagactgcgcgacgccgaacgcgatgaggaggtggcc 722 Query: 556 gacgca 561 |||||| Sbjct: 721 gacgca 716
>dbj|AK064790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000C06, full insert sequence Length = 2309 Score = 422 bits (213), Expect = e-115 Identities = 328/366 (89%), Gaps = 3/366 (0%) Strand = Plus / Minus Query: 196 ccagacgagcacgagcgagacgagcgcgccggcgacggtgacggcggtgatgatgaggaa 255 ||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||| Sbjct: 1804 ccagacgagcacgagggagatgagcgcgccggcgacggtggcggcggtgatgatgaggaa 1745 Query: 256 ggcgagcttgaagcactgcacgccgatgcaggtcttgtcgccggcgccgtcgagcgtgcc 315 ||| | |||||||||||||||||| |||||||||||||||| ||| |||||| ||| Sbjct: 1744 ggccttcctgaagcactgcacgccgaggcaggtcttgtcgccg---ccggcgagcgagcc 1688 Query: 316 gccgtgctgcctggcggcctccacgtcgtagaggtaccccgcgacgcgcacgttgagcgc 375 ||||||||||||||| ||||| |||||||||||||| || |||||||| |||||||| | Sbjct: 1687 gccgtgctgcctggccgcctcgacgtcgtagaggtagccggcgacgcggacgttgaggac 1628 Query: 376 gtatgcgccgatggggcttgccacggatccgaagttgtagagcgtggagtagtacttgag 435 ||| ||||||| |||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 1627 gtaggcgccgacggggctcgccacggagccgaagttgtagagcgtggagtagtacttgag 1568 Query: 436 cccgaacacctcggagatgatggcgaagagcagcggccactgcgccccgaagcagaaccc 495 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1567 gccgaacacctcggagatgatggcgaagaggagcggccactgcgccccgaagcagaagcc 1508 Query: 496 gatgaccaccgacgccgcgtagagcgactgcggcacgccgaangcgatgagaaagtggcc 555 ||||| || || || |||||||| ||||||| |||||||| |||||||| | |||||| Sbjct: 1507 gatgatgacggaggcggcgtagagagactgcgcgacgccgaacgcgatgaggaggtggcc 1448 Query: 556 gacgca 561 |||||| Sbjct: 1447 gacgca 1442
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 311 bits (157), Expect = 1e-81 Identities = 311/362 (85%), Gaps = 3/362 (0%) Strand = Plus / Minus Query: 200 acgagcacgagcgagacgagcgcgccggcgacggtgacggcggtgatgatgaggaaggcg 259 ||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||| | Sbjct: 17943516 acgagcagcagcgagacgagcgcgccggcgaaggtgacgccggtgatgatgaggaaggag 17943457 Query: 260 agcttgaagcactgcacgccgatgcaggtcttgtcgccggcgccgtcgagcgtgccgccg 319 ||||||||||| ||| || ||||| |||||||||||||| || ||| ||||||| Sbjct: 17943456 cgcttgaagcacatcacccccttgcagatcttgtcgccggcgacggcgac---gccgccg 17943400 Query: 320 tgctgcctggcggcctccacgtcgtagaggtaccccgcgacgcgcacgttgagcgcgtat 379 ||||||||||| ||||| ||||||| | |||||| || |||||||||||| |||| Sbjct: 17943399 tgctgcctggccgcctcggcgtcgtacatccgccccgccacccgcacgttgagcacgtag 17943340 Query: 380 gcgccgatggggcttgccacggatccgaagttgtagagcgtggagtagtacttgagcccg 439 |||||||||||||| || |||| ||||||||| |||||||||||||||||||||| ||| Sbjct: 17943339 gcgccgatggggctcgcggcggagccgaagttgaagagcgtggagtagtacttgaggccg 17943280 Query: 440 aacacctcggagatgatggcgaagagcagcggccactgcgccccgaagcagaacccgatg 499 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||| Sbjct: 17943279 aacacctcggagatgatggcgaacagcagcggccactgcgcgccgaagcagaagccgatg 17943220 Query: 500 accaccgacgccgcgtagagcgactgcggcacgccgaangcgatgagaaagtggccgacg 559 | || || || ||||||||||| ||| |||||||| |||||||| | |||||||||| Sbjct: 17943219 atgacggaggcggcgtagagcgagcccgggacgccgaacgcgatgaggaggtggccgacg 17943160 Query: 560 ca 561 || Sbjct: 17943159 ca 17943158 Score = 129 bits (65), Expect = 1e-26 Identities = 113/129 (87%) Strand = Plus / Minus Query: 409 gttgtagagcgtggagtagtacttgagcccgaacacctcggagatgatggcgaagagcag 468 |||||| ||||| |||||||||||||||||||||||||| ||||||||||| | || || Sbjct: 27362361 gttgtacagcgtcgagtagtacttgagcccgaacacctccgagatgatggccaggatcat 27362302 Query: 469 cggccactgcgccccgaagcagaacccgatgaccaccgacgccgcgtagagcgactgcgg 528 ||| || ||||||||||||||||||||| | ||||||||||||||| |||||| ||| Sbjct: 27362301 cgggtacgccgccccgaagcagaacccgatcagcaccgacgccgcgtatagcgaccccgg 27362242 Query: 529 cacgccgaa 537 ||||||||| Sbjct: 27362241 cacgccgaa 27362233 Score = 69.9 bits (35), Expect = 9e-09 Identities = 112/138 (81%) Strand = Plus / Plus Query: 406 gaagttgtagagcgtggagtagtacttgagcccgaacacctcggagatgatggcgaagag 465 ||||||||||||||| ||||||||||||| || |||| ||| || | | | || | || Sbjct: 27366600 gaagttgtagagcgtcgagtagtacttgaagccaaacagctccgacacgctcgccaggat 27366659 Query: 466 cagcggccactgcgccccgaagcagaacccgatgaccaccgacgccgcgtagagcgactg 525 ||||||| | || |||||||||||||| | ||||||||||||||||| |||||| Sbjct: 27366660 cagcggctgcgcggcgccgaagcagaaccccaccaccaccgacgccgcgtacagcgaccc 27366719 Query: 526 cggcacgccgaangcgat 543 |||||||||||| ||||| Sbjct: 27366720 cggcacgccgaacgcgat 27366737 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 147 cgtccctgaacttggcgtagatgtc 171 ||||| ||||||||||||||||||| Sbjct: 27366335 cgtccttgaacttggcgtagatgtc 27366359
>dbj|AK121736.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033084H17, full insert sequence Length = 2067 Score = 311 bits (157), Expect = 1e-81 Identities = 311/362 (85%), Gaps = 3/362 (0%) Strand = Plus / Minus Query: 200 acgagcacgagcgagacgagcgcgccggcgacggtgacggcggtgatgatgaggaaggcg 259 ||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||| | Sbjct: 1706 acgagcagcagcgagacgagcgcgccggcgaaggtgacgccggtgatgatgaggaaggag 1647 Query: 260 agcttgaagcactgcacgccgatgcaggtcttgtcgccggcgccgtcgagcgtgccgccg 319 ||||||||||| ||| || ||||| |||||||||||||| || ||| ||||||| Sbjct: 1646 cgcttgaagcacatcacccccttgcagatcttgtcgccggcgacggcgac---gccgccg 1590 Query: 320 tgctgcctggcggcctccacgtcgtagaggtaccccgcgacgcgcacgttgagcgcgtat 379 ||||||||||| ||||| ||||||| | |||||| || |||||||||||| |||| Sbjct: 1589 tgctgcctggccgcctcggcgtcgtacatccgccccgccacccgcacgttgagcacgtag 1530 Query: 380 gcgccgatggggcttgccacggatccgaagttgtagagcgtggagtagtacttgagcccg 439 |||||||||||||| || |||| ||||||||| |||||||||||||||||||||| ||| Sbjct: 1529 gcgccgatggggctcgcggcggagccgaagttgaagagcgtggagtagtacttgaggccg 1470 Query: 440 aacacctcggagatgatggcgaagagcagcggccactgcgccccgaagcagaacccgatg 499 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||| Sbjct: 1469 aacacctcggagatgatggcgaacagcagcggccactgcgcgccgaagcagaagccgatg 1410 Query: 500 accaccgacgccgcgtagagcgactgcggcacgccgaangcgatgagaaagtggccgacg 559 | || || || ||||||||||| ||| |||||||| |||||||| | |||||||||| Sbjct: 1409 atgacggaggcggcgtagagcgagcccgggacgccgaacgcgatgaggaggtggccgacg 1350 Query: 560 ca 561 || Sbjct: 1349 ca 1348
>dbj|AK058449.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-G09, full insert sequence Length = 1600 Score = 311 bits (157), Expect = 1e-81 Identities = 311/362 (85%), Gaps = 3/362 (0%) Strand = Plus / Minus Query: 200 acgagcacgagcgagacgagcgcgccggcgacggtgacggcggtgatgatgaggaaggcg 259 ||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||| | Sbjct: 1283 acgagcagcagcgagacgagcgcgccggcgaaggtgacgccggtgatgatgaggaaggag 1224 Query: 260 agcttgaagcactgcacgccgatgcaggtcttgtcgccggcgccgtcgagcgtgccgccg 319 ||||||||||| ||| || ||||| |||||||||||||| || ||| ||||||| Sbjct: 1223 cgcttgaagcacatcacccccttgcagatcttgtcgccggcgacggcgac---gccgccg 1167 Query: 320 tgctgcctggcggcctccacgtcgtagaggtaccccgcgacgcgcacgttgagcgcgtat 379 ||||||||||| ||||| ||||||| | |||||| || |||||||||||| |||| Sbjct: 1166 tgctgcctggccgcctcggcgtcgtacatccgccccgccacccgcacgttgagcacgtag 1107 Query: 380 gcgccgatggggcttgccacggatccgaagttgtagagcgtggagtagtacttgagcccg 439 |||||||||||||| || |||| ||||||||| |||||||||||||||||||||| ||| Sbjct: 1106 gcgccgatggggctcgcggcggagccgaagttgaagagcgtggagtagtacttgaggccg 1047 Query: 440 aacacctcggagatgatggcgaagagcagcggccactgcgccccgaagcagaacccgatg 499 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||| Sbjct: 1046 aacacctcggagatgatggcgaacagcagcggccactgcgcgccgaagcagaagccgatg 987 Query: 500 accaccgacgccgcgtagagcgactgcggcacgccgaangcgatgagaaagtggccgacg 559 | || || || ||||||||||| ||| |||||||| |||||||| | |||||||||| Sbjct: 986 atgacggaggcggcgtagagcgagcccgggacgccgaacgcgatgaggaggtggccgacg 927 Query: 560 ca 561 || Sbjct: 926 ca 925
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 311 bits (157), Expect = 1e-81 Identities = 311/362 (85%), Gaps = 3/362 (0%) Strand = Plus / Minus Query: 200 acgagcacgagcgagacgagcgcgccggcgacggtgacggcggtgatgatgaggaaggcg 259 ||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||| | Sbjct: 17869835 acgagcagcagcgagacgagcgcgccggcgaaggtgacgccggtgatgatgaggaaggag 17869776 Query: 260 agcttgaagcactgcacgccgatgcaggtcttgtcgccggcgccgtcgagcgtgccgccg 319 ||||||||||| ||| || ||||| |||||||||||||| || ||| ||||||| Sbjct: 17869775 cgcttgaagcacatcacccccttgcagatcttgtcgccggcgacggcgac---gccgccg 17869719 Query: 320 tgctgcctggcggcctccacgtcgtagaggtaccccgcgacgcgcacgttgagcgcgtat 379 ||||||||||| ||||| ||||||| | |||||| || |||||||||||| |||| Sbjct: 17869718 tgctgcctggccgcctcggcgtcgtacatccgccccgccacccgcacgttgagcacgtag 17869659 Query: 380 gcgccgatggggcttgccacggatccgaagttgtagagcgtggagtagtacttgagcccg 439 |||||||||||||| || |||| ||||||||| |||||||||||||||||||||| ||| Sbjct: 17869658 gcgccgatggggctcgcggcggagccgaagttgaagagcgtggagtagtacttgaggccg 17869599 Query: 440 aacacctcggagatgatggcgaagagcagcggccactgcgccccgaagcagaacccgatg 499 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||| Sbjct: 17869598 aacacctcggagatgatggcgaacagcagcggccactgcgcgccgaagcagaagccgatg 17869539 Query: 500 accaccgacgccgcgtagagcgactgcggcacgccgaangcgatgagaaagtggccgacg 559 | || || || ||||||||||| ||| |||||||| |||||||| | |||||||||| Sbjct: 17869538 atgacggaggcggcgtagagcgagcccgggacgccgaacgcgatgaggaggtggccgacg 17869479 Query: 560 ca 561 || Sbjct: 17869478 ca 17869477 Score = 129 bits (65), Expect = 1e-26 Identities = 113/129 (87%) Strand = Plus / Minus Query: 409 gttgtagagcgtggagtagtacttgagcccgaacacctcggagatgatggcgaagagcag 468 |||||| ||||| |||||||||||||||||||||||||| ||||||||||| | || || Sbjct: 27287961 gttgtacagcgtcgagtagtacttgagcccgaacacctccgagatgatggccaggatcat 27287902 Query: 469 cggccactgcgccccgaagcagaacccgatgaccaccgacgccgcgtagagcgactgcgg 528 ||| || ||||||||||||||||||||| | ||||||||||||||| |||||| ||| Sbjct: 27287901 cgggtacgccgccccgaagcagaacccgatcagcaccgacgccgcgtatagcgaccccgg 27287842 Query: 529 cacgccgaa 537 ||||||||| Sbjct: 27287841 cacgccgaa 27287833 Score = 69.9 bits (35), Expect = 9e-09 Identities = 112/138 (81%) Strand = Plus / Plus Query: 406 gaagttgtagagcgtggagtagtacttgagcccgaacacctcggagatgatggcgaagag 465 ||||||||||||||| ||||||||||||| || |||| ||| || | | | || | || Sbjct: 27292200 gaagttgtagagcgtcgagtagtacttgaagccaaacagctccgacacgctcgccaggat 27292259 Query: 466 cagcggccactgcgccccgaagcagaacccgatgaccaccgacgccgcgtagagcgactg 525 ||||||| | || |||||||||||||| | ||||||||||||||||| |||||| Sbjct: 27292260 cagcggctgcgcggcgccgaagcagaaccccaccaccaccgacgccgcgtacagcgaccc 27292319 Query: 526 cggcacgccgaangcgat 543 |||||||||||| ||||| Sbjct: 27292320 cggcacgccgaacgcgat 27292337 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 147 cgtccctgaacttggcgtagatgtc 171 ||||| ||||||||||||||||||| Sbjct: 27291935 cgtccttgaacttggcgtagatgtc 27291959
>emb|AL928744.3|CNS08CBH Oryza sativa chromosome 12, . BAC OSJNBa0041B10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147543 Score = 311 bits (157), Expect = 1e-81 Identities = 311/362 (85%), Gaps = 3/362 (0%) Strand = Plus / Plus Query: 200 acgagcacgagcgagacgagcgcgccggcgacggtgacggcggtgatgatgaggaaggcg 259 ||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||| | Sbjct: 55040 acgagcagcagcgagacgagcgcgccggcgaaggtgacgccggtgatgatgaggaaggag 55099 Query: 260 agcttgaagcactgcacgccgatgcaggtcttgtcgccggcgccgtcgagcgtgccgccg 319 ||||||||||| ||| || ||||| |||||||||||||| || ||| ||||||| Sbjct: 55100 cgcttgaagcacatcacccccttgcagatcttgtcgccggcgacggcgac---gccgccg 55156 Query: 320 tgctgcctggcggcctccacgtcgtagaggtaccccgcgacgcgcacgttgagcgcgtat 379 ||||||||||| ||||| ||||||| | |||||| || |||||||||||| |||| Sbjct: 55157 tgctgcctggccgcctcggcgtcgtacatccgccccgccacccgcacgttgagcacgtag 55216 Query: 380 gcgccgatggggcttgccacggatccgaagttgtagagcgtggagtagtacttgagcccg 439 |||||||||||||| || |||| ||||||||| |||||||||||||||||||||| ||| Sbjct: 55217 gcgccgatggggctcgcggcggagccgaagttgaagagcgtggagtagtacttgaggccg 55276 Query: 440 aacacctcggagatgatggcgaagagcagcggccactgcgccccgaagcagaacccgatg 499 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||| Sbjct: 55277 aacacctcggagatgatggcgaacagcagcggccactgcgcgccgaagcagaagccgatg 55336 Query: 500 accaccgacgccgcgtagagcgactgcggcacgccgaangcgatgagaaagtggccgacg 559 | || || || ||||||||||| ||| |||||||| |||||||| | |||||||||| Sbjct: 55337 atgacggaggcggcgtagagcgagcccgggacgccgaacgcgatgaggaggtggccgacg 55396 Query: 560 ca 561 || Sbjct: 55397 ca 55398
>ref|XM_469310.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1821 Score = 198 bits (100), Expect = 1e-47 Identities = 160/180 (88%) Strand = Plus / Minus Query: 340 gtcgtagaggtaccccgcgacgcgcacgttgagcgcgtatgcgccgatggggcttgccac 399 ||||||||||| || | |||||| |||||||| ||| | ||||| |||||| ||||| Sbjct: 1506 gtcgtagaggtggccggtgacgcggacgttgaggatgtaggagccgacggggctcgccac 1447 Query: 400 ggatccgaagttgtagagcgtggagtagtacttgagcccgaacacctcggagatgatggc 459 || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1446 ggcgccgaagttgtagagcgtggagtagtacttgaggccgaacacctcggagatgatggc 1387 Query: 460 gaagagcagcggccactgcgccccgaagcagaacccgatgaccaccgacgccgcgtagag 519 ||| ||||||||||||||||| ||||||||||| |||| || |||||||||||||||||| Sbjct: 1386 gaacagcagcggccactgcgcgccgaagcagaagccgaggatcaccgacgccgcgtagag 1327 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Minus Query: 149 tccctgaacttggcgtagatgtcgctgcggtagaactt 186 |||||||||||| |||| | ||||| |||||||||||| Sbjct: 1715 tccctgaacttgccgtacaggtcgccgcggtagaactt 1678
>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete sequence Length = 149303 Score = 198 bits (100), Expect = 1e-47 Identities = 160/180 (88%) Strand = Plus / Plus Query: 340 gtcgtagaggtaccccgcgacgcgcacgttgagcgcgtatgcgccgatggggcttgccac 399 ||||||||||| || | |||||| |||||||| ||| | ||||| |||||| ||||| Sbjct: 31751 gtcgtagaggtggccggtgacgcggacgttgaggatgtaggagccgacggggctcgccac 31810 Query: 400 ggatccgaagttgtagagcgtggagtagtacttgagcccgaacacctcggagatgatggc 459 || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 31811 ggcgccgaagttgtagagcgtggagtagtacttgaggccgaacacctcggagatgatggc 31870 Query: 460 gaagagcagcggccactgcgccccgaagcagaacccgatgaccaccgacgccgcgtagag 519 ||| ||||||||||||||||| ||||||||||| |||| || |||||||||||||||||| Sbjct: 31871 gaacagcagcggccactgcgcgccgaagcagaagccgaggatcaccgacgccgcgtagag 31930 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 149 tccctgaacttggcgtagatgtcgctgcggtagaactt 186 |||||||||||| |||| | ||||| |||||||||||| Sbjct: 31542 tccctgaacttgccgtacaggtcgccgcggtagaactt 31579
>dbj|AK062594.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-A06, full insert sequence Length = 2300 Score = 167 bits (84), Expect = 5e-38 Identities = 206/247 (83%) Strand = Plus / Minus Query: 315 cgccgtgctgcctggcggcctccacgtcgtagaggtaccccgcgacgcgcacgttgagcg 374 ||||| |||||||| | |||||| |||||||||| ||| |||||| | |||||||| Sbjct: 1624 cgccgggctgcctgcccgcctccgcgtcgtagagcctcccggcgacgaggacgttgagga 1565 Query: 375 cgtatgcgccgatggggcttgccacggatccgaagttgtagagcgtggagtagtacttga 434 ||| | ||||| |||||| |||| | ||||||||||||||||||||||||||||||| Sbjct: 1564 tgtaggagccgacggggctcgccatgccgccgaagttgtagagcgtggagtagtacttga 1505 Query: 435 gcccgaacacctcggagatgatggcgaagagcagcggccactgcgccccgaagcagaacc 494 | |||||||||||||||||||||||||| | |||||||||||||| || |||||||| | Sbjct: 1504 ggccgaacacctcggagatgatggcgaacacgagcggccactgcgcgccaaagcagaagc 1445 Query: 495 cgatgaccaccgacgccgcgtagagcgactgcggcacgccgaangcgatgagaaagtggc 554 ||||||| || || || |||||||||| |||| ||||||| |||||||| | ||||| Sbjct: 1444 cgatgacgacggaggcggcgtagagcgcgcgcgggacgccgagcgcgatgaggaggtggc 1385 Query: 555 cgacgca 561 || |||| Sbjct: 1384 cggcgca 1378 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 196 ccagacgagcacgagcgagacgagcgcgccggcgacggtgacggcggtgatgatgaggaa 255 |||||| |||||||||||||||||||||||| |||||| | || |||||||||||||| Sbjct: 1749 ccagaccagcacgagcgagacgagcgcgccgaacacggtggcagccgtgatgatgaggaa 1690 Query: 256 gg 257 || Sbjct: 1689 gg 1688
>ref|XM_476933.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2301 Score = 159 bits (80), Expect = 1e-35 Identities = 205/247 (82%) Strand = Plus / Minus Query: 315 cgccgtgctgcctggcggcctccacgtcgtagaggtaccccgcgacgcgcacgttgagcg 374 ||||| |||||||| | |||||| |||||||||| ||| |||||| | |||||||| Sbjct: 1625 cgccgggctgcctgcccgcctccgcgtcgtagagcctcccggcgacgaggacgttgagga 1566 Query: 375 cgtatgcgccgatggggcttgccacggatccgaagttgtagagcgtggagtagtacttga 434 ||| | ||||| |||||| |||| | ||||||||||||||||||||||||||||||| Sbjct: 1565 tgtaggagccgacggggctcgccatgccgccgaagttgtagagcgtggagtagtacttga 1506 Query: 435 gcccgaacacctcggagatgatggcgaagagcagcggccactgcgccccgaagcagaacc 494 | |||||||||||||||||||||||||| | |||||||||||||| || |||||||| | Sbjct: 1505 ggccgaacacctcggagatgatggcgaacacgagcggccactgcgcgccaaagcagaagc 1446 Query: 495 cgatgaccaccgacgccgcgtagagcgactgcggcacgccgaangcgatgagaaagtggc 554 |||||| || || || |||||||||| |||| ||||||| |||||||| | ||||| Sbjct: 1445 cgatgatgacggaggcggcgtagagcgcgcgcgggacgccgagcgcgatgaggaggtggc 1386 Query: 555 cgacgca 561 || |||| Sbjct: 1385 cggcgca 1379 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 196 ccagacgagcacgagcgagacgagcgcgccggcgacggtgacggcggtgatgatgaggaa 255 |||||| |||||||||||||||||||||||| |||||| | || |||||||||||||| Sbjct: 1750 ccagaccagcacgagcgagacgagcgcgccgaacacggtggcagccgtgatgatgaggaa 1691 Query: 256 gg 257 || Sbjct: 1690 gg 1689
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 159 bits (80), Expect = 1e-35 Identities = 205/247 (82%) Strand = Plus / Minus Query: 315 cgccgtgctgcctggcggcctccacgtcgtagaggtaccccgcgacgcgcacgttgagcg 374 ||||| |||||||| | |||||| |||||||||| ||| |||||| | |||||||| Sbjct: 4731007 cgccgggctgcctgcccgcctccgcgtcgtagagcctcccggcgacgaggacgttgagga 4730948 Query: 375 cgtatgcgccgatggggcttgccacggatccgaagttgtagagcgtggagtagtacttga 434 ||| | ||||| |||||| |||| | ||||||||||||||||||||||||||||||| Sbjct: 4730947 tgtaggagccgacggggctcgccatgccgccgaagttgtagagcgtggagtagtacttga 4730888 Query: 435 gcccgaacacctcggagatgatggcgaagagcagcggccactgcgccccgaagcagaacc 494 | |||||||||||||||||||||||||| | |||||||||||||| || |||||||| | Sbjct: 4730887 ggccgaacacctcggagatgatggcgaacacgagcggccactgcgcgccaaagcagaagc 4730828 Query: 495 cgatgaccaccgacgccgcgtagagcgactgcggcacgccgaangcgatgagaaagtggc 554 |||||| || || || |||||||||| |||| ||||||| |||||||| | ||||| Sbjct: 4730827 cgatgatgacggaggcggcgtagagcgcgcgcgggacgccgagcgcgatgaggaggtggc 4730768 Query: 555 cgacgca 561 || |||| Sbjct: 4730767 cggcgca 4730761 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 196 ccagacgagcacgagcgagacgagcgcgccggcgacggtgacggcggtgatgatgaggaa 255 |||||| |||||||||||||||||||||||| |||||| | || |||||||||||||| Sbjct: 4731132 ccagaccagcacgagcgagacgagcgcgccgaacacggtggcagccgtgatgatgaggaa 4731073 Query: 256 gg 257 || Sbjct: 4731072 gg 4731071 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 cgccggcgacggtgacggcg 241 |||||||||||||||||||| Sbjct: 23376935 cgccggcgacggtgacggcg 23376954 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 cggcgacggtgacggcggtg 244 |||||||||||||||||||| Sbjct: 6593077 cggcgacggtgacggcggtg 6593096
>dbj|AP005179.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0084L07 Length = 127992 Score = 159 bits (80), Expect = 1e-35 Identities = 205/247 (82%) Strand = Plus / Minus Query: 315 cgccgtgctgcctggcggcctccacgtcgtagaggtaccccgcgacgcgcacgttgagcg 374 ||||| |||||||| | |||||| |||||||||| ||| |||||| | |||||||| Sbjct: 48917 cgccgggctgcctgcccgcctccgcgtcgtagagcctcccggcgacgaggacgttgagga 48858 Query: 375 cgtatgcgccgatggggcttgccacggatccgaagttgtagagcgtggagtagtacttga 434 ||| | ||||| |||||| |||| | ||||||||||||||||||||||||||||||| Sbjct: 48857 tgtaggagccgacggggctcgccatgccgccgaagttgtagagcgtggagtagtacttga 48798 Query: 435 gcccgaacacctcggagatgatggcgaagagcagcggccactgcgccccgaagcagaacc 494 | |||||||||||||||||||||||||| | |||||||||||||| || |||||||| | Sbjct: 48797 ggccgaacacctcggagatgatggcgaacacgagcggccactgcgcgccaaagcagaagc 48738 Query: 495 cgatgaccaccgacgccgcgtagagcgactgcggcacgccgaangcgatgagaaagtggc 554 |||||| || || || |||||||||| |||| ||||||| |||||||| | ||||| Sbjct: 48737 cgatgatgacggaggcggcgtagagcgcgcgcgggacgccgagcgcgatgaggaggtggc 48678 Query: 555 cgacgca 561 || |||| Sbjct: 48677 cggcgca 48671 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 196 ccagacgagcacgagcgagacgagcgcgccggcgacggtgacggcggtgatgatgaggaa 255 |||||| |||||||||||||||||||||||| |||||| | || |||||||||||||| Sbjct: 49042 ccagaccagcacgagcgagacgagcgcgccgaacacggtggcagccgtgatgatgaggaa 48983 Query: 256 gg 257 || Sbjct: 48982 gg 48981
>dbj|AP005877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0002L09 Length = 146343 Score = 159 bits (80), Expect = 1e-35 Identities = 205/247 (82%) Strand = Plus / Minus Query: 315 cgccgtgctgcctggcggcctccacgtcgtagaggtaccccgcgacgcgcacgttgagcg 374 ||||| |||||||| | |||||| |||||||||| ||| |||||| | |||||||| Sbjct: 5520 cgccgggctgcctgcccgcctccgcgtcgtagagcctcccggcgacgaggacgttgagga 5461 Query: 375 cgtatgcgccgatggggcttgccacggatccgaagttgtagagcgtggagtagtacttga 434 ||| | ||||| |||||| |||| | ||||||||||||||||||||||||||||||| Sbjct: 5460 tgtaggagccgacggggctcgccatgccgccgaagttgtagagcgtggagtagtacttga 5401 Query: 435 gcccgaacacctcggagatgatggcgaagagcagcggccactgcgccccgaagcagaacc 494 | |||||||||||||||||||||||||| | |||||||||||||| || |||||||| | Sbjct: 5400 ggccgaacacctcggagatgatggcgaacacgagcggccactgcgcgccaaagcagaagc 5341 Query: 495 cgatgaccaccgacgccgcgtagagcgactgcggcacgccgaangcgatgagaaagtggc 554 |||||| || || || |||||||||| |||| ||||||| |||||||| | ||||| Sbjct: 5340 cgatgatgacggaggcggcgtagagcgcgcgcgggacgccgagcgcgatgaggaggtggc 5281 Query: 555 cgacgca 561 || |||| Sbjct: 5280 cggcgca 5274 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 196 ccagacgagcacgagcgagacgagcgcgccggcgacggtgacggcggtgatgatgaggaa 255 |||||| |||||||||||||||||||||||| |||||| | || |||||||||||||| Sbjct: 5645 ccagaccagcacgagcgagacgagcgcgccgaacacggtggcagccgtgatgatgaggaa 5586 Query: 256 gg 257 || Sbjct: 5585 gg 5584
>dbj|AK105095.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-A11, full insert sequence Length = 2757 Score = 129 bits (65), Expect = 1e-26 Identities = 113/129 (87%) Strand = Plus / Minus Query: 409 gttgtagagcgtggagtagtacttgagcccgaacacctcggagatgatggcgaagagcag 468 |||||| ||||| |||||||||||||||||||||||||| ||||||||||| | || || Sbjct: 1488 gttgtacagcgtcgagtagtacttgagcccgaacacctccgagatgatggccaggatcat 1429 Query: 469 cggccactgcgccccgaagcagaacccgatgaccaccgacgccgcgtagagcgactgcgg 528 ||| || ||||||||||||||||||||| | ||||||||||||||| |||||| ||| Sbjct: 1428 cgggtacgccgccccgaagcagaacccgatcagcaccgacgccgcgtatagcgaccccgg 1369 Query: 529 cacgccgaa 537 ||||||||| Sbjct: 1368 cacgccgaa 1360
>dbj|AK070555.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061E14, full insert sequence Length = 2077 Score = 129 bits (65), Expect = 1e-26 Identities = 113/129 (87%) Strand = Plus / Minus Query: 409 gttgtagagcgtggagtagtacttgagcccgaacacctcggagatgatggcgaagagcag 468 |||||| ||||| |||||||||||||||||||||||||| ||||||||||| | || || Sbjct: 1464 gttgtacagcgtcgagtagtacttgagcccgaacacctccgagatgatggccaggatcat 1405 Query: 469 cggccactgcgccccgaagcagaacccgatgaccaccgacgccgcgtagagcgactgcgg 528 ||| || ||||||||||||||||||||| | ||||||||||||||| |||||| ||| Sbjct: 1404 cgggtacgccgccccgaagcagaacccgatcagcaccgacgccgcgtatagcgaccccgg 1345 Query: 529 cacgccgaa 537 ||||||||| Sbjct: 1344 cacgccgaa 1336
>emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119_E02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124605 Score = 129 bits (65), Expect = 1e-26 Identities = 113/129 (87%) Strand = Plus / Minus Query: 409 gttgtagagcgtggagtagtacttgagcccgaacacctcggagatgatggcgaagagcag 468 |||||| ||||| |||||||||||||||||||||||||| ||||||||||| | || || Sbjct: 30681 gttgtacagcgtcgagtagtacttgagcccgaacacctccgagatgatggccaggatcat 30622 Query: 469 cggccactgcgccccgaagcagaacccgatgaccaccgacgccgcgtagagcgactgcgg 528 ||| || ||||||||||||||||||||| | ||||||||||||||| |||||| ||| Sbjct: 30621 cgggtacgccgccccgaagcagaacccgatcagcaccgacgccgcgtatagcgaccccgg 30562 Query: 529 cacgccgaa 537 ||||||||| Sbjct: 30561 cacgccgaa 30553 Score = 69.9 bits (35), Expect = 9e-09 Identities = 112/138 (81%) Strand = Plus / Plus Query: 406 gaagttgtagagcgtggagtagtacttgagcccgaacacctcggagatgatggcgaagag 465 ||||||||||||||| ||||||||||||| || |||| ||| || | | | || | || Sbjct: 34920 gaagttgtagagcgtcgagtagtacttgaagccaaacagctccgacacgctcgccaggat 34979 Query: 466 cagcggccactgcgccccgaagcagaacccgatgaccaccgacgccgcgtagagcgactg 525 ||||||| | || |||||||||||||| | ||||||||||||||||| |||||| Sbjct: 34980 cagcggctgcgcggcgccgaagcagaaccccaccaccaccgacgccgcgtacagcgaccc 35039 Query: 526 cggcacgccgaangcgat 543 |||||||||||| ||||| Sbjct: 35040 cggcacgccgaacgcgat 35057 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 147 cgtccctgaacttggcgtagatgtc 171 ||||| ||||||||||||||||||| Sbjct: 34655 cgtccttgaacttggcgtagatgtc 34679
>ref|NM_195061.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0081F12.22), mRNA Length = 1803 Score = 119 bits (60), Expect = 1e-23 Identities = 158/191 (82%) Strand = Plus / Minus Query: 356 gcgacgcgcacgttgagcgcgtatgcgccgatggggcttgccacggatccgaagttgtag 415 |||||||||||||||| ||| |||||||||||||| ||||| || | ||||||| Sbjct: 1511 gcgacgcgcacgttgaatatgtacgcgccgatggggctcgccaccatgcccaggttgtag 1452 Query: 416 agcgtggagtagtacttgagcccgaacacctcggagatgatggcgaagagcagcggccac 475 ||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| || Sbjct: 1451 agcgtggcgtagtacttgagcccgaacacctcggagacgatggagaagagcagcgtgtac 1392 Query: 476 tgcgccccgaagcagaacccgatgaccaccgacgccgcgtagagcgactgcggcacgccg 535 || | ||||||| ||| |||| ||| || ||||||||||| || |||||||||||| Sbjct: 1391 agcccgccgaagctgaagccgacgacgacggacgccgcgtacaggccgtgcggcacgccg 1332 Query: 536 aangcgatgag 546 | |||||||| Sbjct: 1331 agcgcgatgag 1321
>gb|AC090488.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0081F12 from chromosome 10, complete sequence Length = 128388 Score = 119 bits (60), Expect = 1e-23 Identities = 158/191 (82%) Strand = Plus / Plus Query: 356 gcgacgcgcacgttgagcgcgtatgcgccgatggggcttgccacggatccgaagttgtag 415 |||||||||||||||| ||| |||||||||||||| ||||| || | ||||||| Sbjct: 103340 gcgacgcgcacgttgaatatgtacgcgccgatggggctcgccaccatgcccaggttgtag 103399 Query: 416 agcgtggagtagtacttgagcccgaacacctcggagatgatggcgaagagcagcggccac 475 ||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| || Sbjct: 103400 agcgtggcgtagtacttgagcccgaacacctcggagacgatggagaagagcagcgtgtac 103459 Query: 476 tgcgccccgaagcagaacccgatgaccaccgacgccgcgtagagcgactgcggcacgccg 535 || | ||||||| ||| |||| ||| || ||||||||||| || |||||||||||| Sbjct: 103460 agcccgccgaagctgaagccgacgacgacggacgccgcgtacaggccgtgcggcacgccg 103519 Query: 536 aangcgatgag 546 | |||||||| Sbjct: 103520 agcgcgatgag 103530
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 119 bits (60), Expect = 1e-23 Identities = 158/191 (82%) Strand = Plus / Plus Query: 356 gcgacgcgcacgttgagcgcgtatgcgccgatggggcttgccacggatccgaagttgtag 415 |||||||||||||||| ||| |||||||||||||| ||||| || | ||||||| Sbjct: 4441732 gcgacgcgcacgttgaatatgtacgcgccgatggggctcgccaccatgcccaggttgtag 4441791 Query: 416 agcgtggagtagtacttgagcccgaacacctcggagatgatggcgaagagcagcggccac 475 ||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| || Sbjct: 4441792 agcgtggcgtagtacttgagcccgaacacctcggagacgatggagaagagcagcgtgtac 4441851 Query: 476 tgcgccccgaagcagaacccgatgaccaccgacgccgcgtagagcgactgcggcacgccg 535 || | ||||||| ||| |||| ||| || ||||||||||| || |||||||||||| Sbjct: 4441852 agcccgccgaagctgaagccgacgacgacggacgccgcgtacaggccgtgcggcacgccg 4441911 Query: 536 aangcgatgag 546 | |||||||| Sbjct: 4441912 agcgcgatgag 4441922
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 119 bits (60), Expect = 1e-23 Identities = 158/191 (82%) Strand = Plus / Plus Query: 356 gcgacgcgcacgttgagcgcgtatgcgccgatggggcttgccacggatccgaagttgtag 415 |||||||||||||||| ||| |||||||||||||| ||||| || | ||||||| Sbjct: 4442553 gcgacgcgcacgttgaatatgtacgcgccgatggggctcgccaccatgcccaggttgtag 4442612 Query: 416 agcgtggagtagtacttgagcccgaacacctcggagatgatggcgaagagcagcggccac 475 ||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| || Sbjct: 4442613 agcgtggcgtagtacttgagcccgaacacctcggagacgatggagaagagcagcgtgtac 4442672 Query: 476 tgcgccccgaagcagaacccgatgaccaccgacgccgcgtagagcgactgcggcacgccg 535 || | ||||||| ||| |||| ||| || ||||||||||| || |||||||||||| Sbjct: 4442673 agcccgccgaagctgaagccgacgacgacggacgccgcgtacaggccgtgcggcacgccg 4442732 Query: 536 aangcgatgag 546 | |||||||| Sbjct: 4442733 agcgcgatgag 4442743
>dbj|AK109612.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-G07, full insert sequence Length = 1853 Score = 69.9 bits (35), Expect = 9e-09 Identities = 112/138 (81%) Strand = Plus / Minus Query: 406 gaagttgtagagcgtggagtagtacttgagcccgaacacctcggagatgatggcgaagag 465 ||||||||||||||| ||||||||||||| || |||| ||| || | | | || | || Sbjct: 1474 gaagttgtagagcgtcgagtagtacttgaagccaaacagctccgacacgctcgccaggat 1415 Query: 466 cagcggccactgcgccccgaagcagaacccgatgaccaccgacgccgcgtagagcgactg 525 ||||||| | || |||||||||||||| | ||||||||||||||||| |||||| Sbjct: 1414 cagcggctgcgcggcgccgaagcagaaccccaccaccaccgacgccgcgtacagcgaccc 1355 Query: 526 cggcacgccgaangcgat 543 |||||||||||| ||||| Sbjct: 1354 cggcacgccgaacgcgat 1337 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 147 cgtccctgaacttggcgtagatgtc 171 ||||| ||||||||||||||||||| Sbjct: 1738 cgtccttgaacttggcgtagatgtc 1714
>gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1036C05, complete sequence Length = 143400 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 222 cgccggcgacggtgacggcggtg 244 ||||||||||||||||||||||| Sbjct: 95236 cgccggcgacggtgacggcggtg 95258
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 222 cgccggcgacggtgacggcggtg 244 ||||||||||||||||||||||| Sbjct: 16144066 cgccggcgacggtgacggcggtg 16144088 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 cgccggcgacggtgacggcgg 242 ||||||||||||||||||||| Sbjct: 23782822 cgccggcgacggtgacggcgg 23782842
>dbj|AK121350.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121M11, full insert sequence Length = 1395 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 222 cgccggcgacggtgacggcggtg 244 ||||||||||||||||||||||| Sbjct: 673 cgccggcgacggtgacggcggtg 651
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 ctgcacgccgatgcaggtcttg 292 |||||||||||||||||||||| Sbjct: 1072782 ctgcacgccgatgcaggtcttg 1072803
>ref|XM_750509.1| Aspergillus fumigatus Af293 MFS monocarboxylate transporter (Afu2g12710) partial mRNA Length = 1260 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 226 ggcgacggtgacggcggtgatg 247 |||||||||||||||||||||| Sbjct: 285 ggcgacggtgacggcggtgatg 264
>gb|AF257215.2| Brevibacterium sp. HCU cyclohexanone oxidation gene cluster 2, complete sequence Length = 11471 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 222 cgccggcgacggtgacggcggt 243 |||||||||||||||||||||| Sbjct: 4591 cgccggcgacggtgacggcggt 4570
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 207 cgagcgagacgagcgcgccggcgacggtga 236 |||||| | ||||||||||||||||||||| Sbjct: 2260069 cgagcgtggcgagcgcgccggcgacggtga 2260040 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 tcgagcgtgccgccgtgctg 324 |||||||||||||||||||| Sbjct: 1674187 tcgagcgtgccgccgtgctg 1674206
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 223 gccggcgacggtgacggcggtg 244 |||||||||||||||||||||| Sbjct: 295886 gccggcgacggtgacggcggtg 295865 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 199 gacgagcacgagcgagacgagcgcgccggcga 230 ||||||||||| || | ||||||||||||||| Sbjct: 5609755 gacgagcacgatcgcgccgagcgcgccggcga 5609724
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 201 cgagcacgagcgagacgagcgcgccggcgacgg 233 |||| |||| |||||||||||| |||||||||| Sbjct: 462791 cgaggacgaacgagacgagcgccccggcgacgg 462759
>ref|XM_953010.1| Neurospora crassa OR74A hypothetical protein (NCU09458.1) partial mRNA Length = 1785 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 gagacgagcgcgccggcgacg 232 ||||||||||||||||||||| Sbjct: 1250 gagacgagcgcgccggcgacg 1230
>ref|XM_332149.1| Neurospora crassa OR74A hypothetical protein (NCU09458.1) partial mRNA Length = 1785 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 gagacgagcgcgccggcgacg 232 ||||||||||||||||||||| Sbjct: 1250 gagacgagcgcgccggcgacg 1230
>gb|AC093952.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1004_E02, complete sequence Length = 127642 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 cgccggcgacggtgacggcgg 242 ||||||||||||||||||||| Sbjct: 63643 cgccggcgacggtgacggcgg 63663
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 295 gccggcgccgtcgagcgtgccgccg 319 |||||||||| |||||||||||||| Sbjct: 3795686 gccggcgccgccgagcgtgccgccg 3795710
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 295 gccggcgccgtcgagcgtgccgccg 319 ||||||||||||||||| ||||||| Sbjct: 2459025 gccggcgccgtcgagcgagccgccg 2459001
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 tcttgtcgccggcgccgtcga 308 ||||||||||||||||||||| Sbjct: 697759 tcttgtcgccggcgccgtcga 697739
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 295 gccggcgccgtcgagcgtgccgccg 319 ||||||||||||||||| ||||||| Sbjct: 2787325 gccggcgccgtcgagcgagccgccg 2787301
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 cgagcgagacgagcgcgccgg 227 ||||||||||||||||||||| Sbjct: 84152 cgagcgagacgagcgcgccgg 84172
>dbj|AP004935.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT02L13, TM0095b, complete sequence Length = 6348 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 tcgctgcggtagaacttgcgg 190 ||||||||||||||||||||| Sbjct: 4695 tcgctgcggtagaacttgcgg 4675
>ref|XM_550596.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1667 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cgacggtgacggcggtgatg 247 |||||||||||||||||||| Sbjct: 453 cgacggtgacggcggtgatg 434
>ref|XM_550595.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1627 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cgacggtgacggcggtgatg 247 |||||||||||||||||||| Sbjct: 453 cgacggtgacggcggtgatg 434
>ref|XM_468184.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2898 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 gtcgccggcgccgtcgagcg 311 |||||||||||||||||||| Sbjct: 2310 gtcgccggcgccgtcgagcg 2291
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 gcgccgtcgagcgtgccgccgtgc 322 ||||||||||||||| |||||||| Sbjct: 1040772 gcgccgtcgagcgtgtcgccgtgc 1040795
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 308 agcgtgccgccgtgctgcctggcg 331 |||||||||||||||||| ||||| Sbjct: 3112367 agcgtgccgccgtgctgcgtggcg 3112344
>ref|XM_478858.1| Oryza sativa (japonica cultivar-group), mRNA Length = 561 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 cgccggcgacggtgacggcg 241 |||||||||||||||||||| Sbjct: 373 cgccggcgacggtgacggcg 354
>gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete sequence Length = 136866 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cgacggtgacggcggtgatg 247 |||||||||||||||||||| Sbjct: 11504 cgacggtgacggcggtgatg 11485
>gb|AC097277.6| Oryza sativa chromosome 3 BAC OSJNBa0022C08 genomic sequence, complete sequence Length = 150155 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 gacgagcgcgccggcgacgg 233 |||||||||||||||||||| Sbjct: 14424 gacgagcgcgccggcgacgg 14405
>ref|XM_426659.1| PREDICTED: Gallus gallus similar to doublesex-mab-3 (DM) domain (LOC429103), mRNA Length = 906 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 cccgcagctccttcccccgg 74 |||||||||||||||||||| Sbjct: 150 cccgcagctccttcccccgg 131
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 gtcgccggcgccgtcgagcg 311 |||||||||||||||||||| Sbjct: 2836564 gtcgccggcgccgtcgagcg 2836583
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggtgacggcggtgatgatga 251 |||||||||||||||||||| Sbjct: 2155189 ggtgacggcggtgatgatga 2155170
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 gcggtgatgatgaggaaggc 258 |||||||||||||||||||| Sbjct: 924332 gcggtgatgatgaggaaggc 924313
>ref|XM_659209.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6697.2), mRNA Length = 1233 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 cggtgacggcggtgatgatg 250 |||||||||||||||||||| Sbjct: 571 cggtgacggcggtgatgatg 552
>ref|XM_754421.1| Ustilago maydis 521 hypothetical protein (UM03367.1) partial mRNA Length = 5193 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 caggtcttgtcgccggcgcc 303 |||||||||||||||||||| Sbjct: 1697 caggtcttgtcgccggcgcc 1716
>gb|DQ096563.1| Toxoplasma gondii rhoptry neck protein 2 (RON2) mRNA, complete cds Length = 4146 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 tgatggcgaagagcagcggc 472 |||||||||||||||||||| Sbjct: 1586 tgatggcgaagagcagcggc 1605
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 355 cgcgacgcgcacgttgagcgcgta 378 |||| ||||||||||||||||||| Sbjct: 552039 cgcgccgcgcacgttgagcgcgta 552062
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 gtcgccggcgccgtcgagcg 311 |||||||||||||||||||| Sbjct: 2101369 gtcgccggcgccgtcgagcg 2101388
>emb|Y14332.1|SEY14332 Saccharopolyspora erythraea partial eryG and eryA genes and eryBII, eryCIII and eryCII genes Length = 3439 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 cgatgaccaccgacgccgcg 514 |||||||||||||||||||| Sbjct: 1048 cgatgaccaccgacgccgcg 1029
>emb|AL627275.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 11/20 Length = 145050 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 cgccgcgtagagcgactgcg 527 |||||||||||||||||||| Sbjct: 43606 cgccgcgtagagcgactgcg 43625
>gb|L39096.1|AVIALGEB Azotobacter vinelandii mannuronan C-5-epimerase (algE4), mannuronan C-5-epimerase (algE1), mannuronan C-5-epimerase (algE2), and mannuronan C-5-epimerase (algE3) genes, complete cds Length = 15759 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cgccggcgccgtcgagcgtg 313 |||||||||||||||||||| Sbjct: 14200 cgccggcgccgtcgagcgtg 14181
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 cgcgccggcgacggtgacgg 239 |||||||||||||||||||| Sbjct: 5645762 cgcgccggcgacggtgacgg 5645743 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cgacggtgacggcggtgatg 247 |||||||||||||||||||| Sbjct: 1691329 cgacggtgacggcggtgatg 1691310
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 gtcgccggcgccgtcgagcg 311 |||||||||||||||||||| Sbjct: 33521723 gtcgccggcgccgtcgagcg 33521742
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 cgccgcgtagagcgactgcg 527 |||||||||||||||||||| Sbjct: 410093 cgccgcgtagagcgactgcg 410074
>dbj|AP004182.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1199_H01 Length = 107252 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 cgccggcgacggtgacggcg 241 |||||||||||||||||||| Sbjct: 58159 cgccggcgacggtgacggcg 58178
>dbj|AP000559.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0493C11 Length = 143113 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cgacggtgacggcggtgatg 247 |||||||||||||||||||| Sbjct: 94500 cgacggtgacggcggtgatg 94481
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 gccgtcgagcgtgccgccgt 320 |||||||||||||||||||| Sbjct: 5985028 gccgtcgagcgtgccgccgt 5985009
>dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0679C08 Length = 156266 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cgacggtgacggcggtgatg 247 |||||||||||||||||||| Sbjct: 16478 cgacggtgacggcggtgatg 16459
>dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021C04 Length = 162115 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 cgcgccggcgacggtgacgg 239 |||||||||||||||||||| Sbjct: 37909 cgcgccggcgacggtgacgg 37890
>dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0054K20 Length = 153584 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 gtcgccggcgccgtcgagcg 311 |||||||||||||||||||| Sbjct: 96598 gtcgccggcgccgtcgagcg 96617
>dbj|AK110453.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-E10, full insert sequence Length = 2368 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 cgcgccggcgacggtgacgg 239 |||||||||||||||||||| Sbjct: 777 cgcgccggcgacggtgacgg 796
>dbj|AK109675.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-B07, full insert sequence Length = 1667 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cgacggtgacggcggtgatg 247 |||||||||||||||||||| Sbjct: 453 cgacggtgacggcggtgatg 434
>dbj|AK105303.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-A07, full insert sequence Length = 1627 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cgacggtgacggcggtgatg 247 |||||||||||||||||||| Sbjct: 453 cgacggtgacggcggtgatg 434
>dbj|AP005160.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0031C24 Length = 194111 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 cggcgacggtgacggcggtg 244 |||||||||||||||||||| Sbjct: 105171 cggcgacggtgacggcggtg 105190
>gb|AY106229.1| Zea mays PCO149655 mRNA sequence Length = 1170 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 tgaacttggcgtagatgtcg 172 |||||||||||||||||||| Sbjct: 703 tgaacttggcgtagatgtcg 684
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 cgccgcgtagagcgactgcg 527 |||||||||||||||||||| Sbjct: 404243 cgccgcgtagagcgactgcg 404224
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 cttgtcgccggcgccgtcga 308 |||||||||||||||||||| Sbjct: 3515767 cttgtcgccggcgccgtcga 3515748
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gccggcgacggtgacggcggtgat 246 ||||||||| |||||||||||||| Sbjct: 2577956 gccggcgaccgtgacggcggtgat 2577979
>gb|U77454.1|SEU77454 Saccharopolyspora erythraea DEBSIII (eryAIII) and erythromycin O-methyltransferase (eryG) genes, partial cds, and ERYCII (eryCII), desosaminyltransferase (eryCII) and EryBII (eryBII) genes, complete cds Length = 3480 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 cgatgaccaccgacgccgcg 514 |||||||||||||||||||| Sbjct: 2407 cgatgaccaccgacgccgcg 2426
>emb|CT485773.1| Xenopus tropicalis finished cDNA, clone TNeu052a15 Length = 1015 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 ccgcagctccttcccccggt 75 |||||||||||||||||||| Sbjct: 276 ccgcagctccttcccccggt 257
>emb|AL928680.5| Mouse DNA sequence from clone RP23-396N6 on chromosome 2, complete sequence Length = 217726 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 tgaagctcctgcagtaattaaccc 57 ||||||||| |||||||||||||| Sbjct: 101486 tgaagctccagcagtaattaaccc 101463 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,462,901 Number of Sequences: 3902068 Number of extensions: 3462901 Number of successful extensions: 66775 Number of sequences better than 10.0: 84 Number of HSP's better than 10.0 without gapping: 93 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 62793 Number of HSP's gapped (non-prelim): 3945 length of query: 564 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 541 effective length of database: 17,143,297,704 effective search space: 9274524057864 effective search space used: 9274524057864 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
