ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd21f20 |
|---|---|
| Clone Library Name | barley_pub |
>FBRL1_ARATH (Q9FEF8) Fibrillarin-1 (SKP1-interacting partner 7)| Length = 308 Score = 171 bits (434), Expect(2) = 3e-46 Identities = 85/96 (88%), Positives = 90/96 (93%) Frame = -1 Query: 534 MLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEVE 355 MLVGMVDVIFSDVAQPDQARILALNAS+FLK GGHFVISIKANCIDS A EAVF +EV+ Sbjct: 209 MLVGMVDVIFSDVAQPDQARILALNASFFLKTGGHFVISIKANCIDSTVAAEAVFQSEVK 268 Query: 354 KLKLEQFKPSEQVTLEPFERDHACVVGGYRMPKKQK 247 KL+ EQFKP+EQVTLEPFERDHACVVGGYRMPKKQK Sbjct: 269 KLQQEQFKPAEQVTLEPFERDHACVVGGYRMPKKQK 304 Score = 33.5 bits (75), Expect(2) = 3e-46 Identities = 14/14 (100%), Positives = 14/14 (100%) Frame = -3 Query: 577 IPIIEDARHPAKYR 536 IPIIEDARHPAKYR Sbjct: 195 IPIIEDARHPAKYR 208
>FBRL2_ARATH (Q94AH9) Fibrillarin-2 (Fibrillarin-like protein)| Length = 320 Score = 170 bits (431), Expect(2) = 6e-46 Identities = 85/97 (87%), Positives = 89/97 (91%) Frame = -1 Query: 534 MLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEVE 355 MLVGMVDVIFSDVAQPDQARILALNASYFLK+GGHFVISIKANCIDS EAVF EV+ Sbjct: 220 MLVGMVDVIFSDVAQPDQARILALNASYFLKSGGHFVISIKANCIDSTVPAEAVFQTEVK 279 Query: 354 KLKLEQFKPSEQVTLEPFERDHACVVGGYRMPKKQKA 244 KL+ EQFKP+EQVTLEPFERDHACVVGGYRMPKK KA Sbjct: 280 KLQQEQFKPAEQVTLEPFERDHACVVGGYRMPKKPKA 316 Score = 33.5 bits (75), Expect(2) = 6e-46 Identities = 14/14 (100%), Positives = 14/14 (100%) Frame = -3 Query: 577 IPIIEDARHPAKYR 536 IPIIEDARHPAKYR Sbjct: 206 IPIIEDARHPAKYR 219
>FBRL_XENLA (P22232) Fibrillarin| Length = 323 Score = 150 bits (379), Expect(2) = 4e-39 Identities = 74/96 (77%), Positives = 83/96 (86%) Frame = -1 Query: 534 MLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEVE 355 +LVGMVDV+F+DVAQPDQ RI+ALNA FLKNGGHFVISIKANCIDS APEAVFAAEV+ Sbjct: 227 ILVGMVDVVFADVAQPDQTRIVALNAHNFLKNGGHFVISIKANCIDSTAAPEAVFAAEVK 286 Query: 354 KLKLEQFKPSEQVTLEPFERDHACVVGGYRMPKKQK 247 K++ E KP EQ+TLEP+ERDHA VVG YR P KQK Sbjct: 287 KMQQENMKPQEQLTLEPYERDHAVVVGIYRPPPKQK 322 Score = 30.8 bits (68), Expect(2) = 4e-39 Identities = 12/14 (85%), Positives = 13/14 (92%) Frame = -3 Query: 577 IPIIEDARHPAKYR 536 IP+IEDARHP KYR Sbjct: 213 IPVIEDARHPHKYR 226
>FBRL_DROME (Q9W1V3) Fibrillarin| Length = 344 Score = 147 bits (370), Expect(2) = 3e-38 Identities = 71/95 (74%), Positives = 82/95 (86%) Frame = -1 Query: 534 MLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEVE 355 MLVGMVD IF+DVAQPDQ RI+ALNA +FLKNGGHFVISIKA+CIDS PEAVFAAEV+ Sbjct: 250 MLVGMVDTIFADVAQPDQGRIVALNAQHFLKNGGHFVISIKASCIDSTAQPEAVFAAEVK 309 Query: 354 KLKLEQFKPSEQVTLEPFERDHACVVGGYRMPKKQ 250 K++ ++ KP EQ+TLEP+ERDHA VVG YR P KQ Sbjct: 310 KMQADKLKPQEQLTLEPYERDHAVVVGVYRPPPKQ 344 Score = 31.2 bits (69), Expect(2) = 3e-38 Identities = 13/14 (92%), Positives = 13/14 (92%) Frame = -3 Query: 577 IPIIEDARHPAKYR 536 IPIIEDARHP KYR Sbjct: 236 IPIIEDARHPHKYR 249
>FBRL_DROER (Q8I1F4) Fibrillarin| Length = 345 Score = 145 bits (367), Expect(2) = 7e-38 Identities = 70/95 (73%), Positives = 82/95 (86%) Frame = -1 Query: 534 MLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEVE 355 MLVGMVD IF+DVAQPDQ RI+ALNA +FLKNGGHFVISIKA+CIDS PEAVFA+EV+ Sbjct: 251 MLVGMVDTIFADVAQPDQGRIVALNAQHFLKNGGHFVISIKASCIDSTAQPEAVFASEVK 310 Query: 354 KLKLEQFKPSEQVTLEPFERDHACVVGGYRMPKKQ 250 K++ ++ KP EQ+TLEP+ERDHA VVG YR P KQ Sbjct: 311 KMQADKLKPQEQLTLEPYERDHAVVVGVYRPPPKQ 345 Score = 31.2 bits (69), Expect(2) = 7e-38 Identities = 13/14 (92%), Positives = 13/14 (92%) Frame = -3 Query: 577 IPIIEDARHPAKYR 536 IPIIEDARHP KYR Sbjct: 237 IPIIEDARHPHKYR 250
>FBRL_CAEEL (Q22053) Fibrillarin| Length = 352 Score = 145 bits (365), Expect(2) = 2e-37 Identities = 75/96 (78%), Positives = 80/96 (83%) Frame = -1 Query: 534 MLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEVE 355 MLVGMVDVIFSDVAQPDQARI+ALNA FL+NGGH VISIKANCIDS PEAVFA EV Sbjct: 256 MLVGMVDVIFSDVAQPDQARIVALNAQNFLRNGGHAVISIKANCIDSTAEPEAVFAGEVN 315 Query: 354 KLKLEQFKPSEQVTLEPFERDHACVVGGYRMPKKQK 247 KLK E+FKP EQVTLEP+ERDHA VV YR K +K Sbjct: 316 KLKEEKFKPLEQVTLEPYERDHAVVVAVYRPVKGKK 351 Score = 30.4 bits (67), Expect(2) = 2e-37 Identities = 11/14 (78%), Positives = 13/14 (92%) Frame = -3 Query: 577 IPIIEDARHPAKYR 536 +PI+EDARHP KYR Sbjct: 242 VPIVEDARHPHKYR 255
>FBRL_RAT (P22509) Fibrillarin (Nucleolar protein 1)| Length = 327 Score = 141 bits (355), Expect(2) = 2e-36 Identities = 69/96 (71%), Positives = 80/96 (83%) Frame = -1 Query: 534 MLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEVE 355 ML+ MVDVIF+DVAQPDQ RI+ALNA FL+NGGHFVISIKANCIDS + EAVFA+EV+ Sbjct: 231 MLIAMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVK 290 Query: 354 KLKLEQFKPSEQVTLEPFERDHACVVGGYRMPKKQK 247 K++ E KP EQ+TLEP+ERDHA VVG YR P K K Sbjct: 291 KMQQENMKPQEQLTLEPYERDHAVVVGVYRPPPKAK 326 Score = 30.8 bits (68), Expect(2) = 2e-36 Identities = 12/14 (85%), Positives = 13/14 (92%) Frame = -3 Query: 577 IPIIEDARHPAKYR 536 IP+IEDARHP KYR Sbjct: 217 IPVIEDARHPHKYR 230
>FBRL_MOUSE (P35550) Fibrillarin (Nucleolar protein 1)| Length = 327 Score = 140 bits (354), Expect(2) = 3e-36 Identities = 69/96 (71%), Positives = 80/96 (83%) Frame = -1 Query: 534 MLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEVE 355 ML+ MVDVIF+DVAQPDQ RI+ALNA FL+NGGHFVISIKANCIDS + EAVFA+EV+ Sbjct: 231 MLIAMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVK 290 Query: 354 KLKLEQFKPSEQVTLEPFERDHACVVGGYRMPKKQK 247 K++ E KP EQ+TLEP+ERDHA VVG YR P K K Sbjct: 291 KMQQENMKPQEQLTLEPYERDHAVVVGVYRPPPKVK 326 Score = 30.8 bits (68), Expect(2) = 3e-36 Identities = 12/14 (85%), Positives = 13/14 (92%) Frame = -3 Query: 577 IPIIEDARHPAKYR 536 IP+IEDARHP KYR Sbjct: 217 IPVIEDARHPHKYR 230
>FBRL_HUMAN (P22087) Fibrillarin (34 kDa nucleolar scleroderma antigen)| Length = 321 Score = 140 bits (354), Expect(2) = 3e-36 Identities = 69/96 (71%), Positives = 80/96 (83%) Frame = -1 Query: 534 MLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEVE 355 ML+ MVDVIF+DVAQPDQ RI+ALNA FL+NGGHFVISIKANCIDS + EAVFA+EV+ Sbjct: 225 MLIAMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVK 284 Query: 354 KLKLEQFKPSEQVTLEPFERDHACVVGGYRMPKKQK 247 K++ E KP EQ+TLEP+ERDHA VVG YR P K K Sbjct: 285 KMQQENMKPQEQLTLEPYERDHAVVVGVYRPPPKVK 320 Score = 30.8 bits (68), Expect(2) = 3e-36 Identities = 12/14 (85%), Positives = 13/14 (92%) Frame = -3 Query: 577 IPIIEDARHPAKYR 536 IP+IEDARHP KYR Sbjct: 211 IPVIEDARHPHKYR 224
>FBRL3_ARATH (Q9FHB3) Putative fibrillarin-3| Length = 292 Score = 127 bits (318), Expect(2) = 6e-33 Identities = 61/94 (64%), Positives = 76/94 (80%) Frame = -1 Query: 534 MLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEVE 355 MLVGMVD+IFSDV P+QA IL+LNASYFLK+GGHF+ISIKAN IDS A E V+ EVE Sbjct: 199 MLVGMVDIIFSDVNHPEQANILSLNASYFLKSGGHFMISIKANSIDSTIAAETVYQMEVE 258 Query: 354 KLKLEQFKPSEQVTLEPFERDHACVVGGYRMPKK 253 KL++E+ +P+E + L+ E HACV GGYR+P+K Sbjct: 259 KLQMEELRPTEILHLDSCEEKHACVFGGYRLPRK 292 Score = 33.5 bits (75), Expect(2) = 6e-33 Identities = 14/14 (100%), Positives = 14/14 (100%) Frame = -3 Query: 577 IPIIEDARHPAKYR 536 IPIIEDARHPAKYR Sbjct: 185 IPIIEDARHPAKYR 198
>FBRL_LEIMA (P35549) Fibrillarin| Length = 297 Score = 131 bits (330), Expect(2) = 7e-33 Identities = 68/96 (70%), Positives = 75/96 (78%) Frame = -1 Query: 534 MLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEVE 355 MLV MVD IF DVAQPDQARILALNA FL+NGGH+VISIKANCIDS V A+E+ Sbjct: 201 MLVPMVDCIFMDVAQPDQARILALNAQAFLQNGGHYVISIKANCIDSTLEAPVVIASELN 260 Query: 354 KLKLEQFKPSEQVTLEPFERDHACVVGGYRMPKKQK 247 KLK ++ KP EQV+LEPFERDHA VVG YR KK K Sbjct: 261 KLKKDKLKPLEQVSLEPFERDHAVVVGVYRPVKKSK 296 Score = 28.5 bits (62), Expect(2) = 7e-33 Identities = 10/14 (71%), Positives = 13/14 (92%) Frame = -3 Query: 577 IPIIEDARHPAKYR 536 +PI+EDAR+P KYR Sbjct: 187 VPIVEDARYPMKYR 200
>FBRL_TETTH (Q27200) Fibrillarin| Length = 294 Score = 136 bits (342), Expect(2) = 1e-32 Identities = 65/94 (69%), Positives = 75/94 (79%) Frame = -1 Query: 546 QSTAMLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFA 367 Q LVGMVDV+F+DVAQPDQARI+ +N YFLKNGGHF+ISIKA CIDS P VFA Sbjct: 200 QEYRFLVGMVDVVFADVAQPDQARIMGMNCQYFLKNGGHFLISIKACCIDSTNEPAVVFA 259 Query: 366 AEVEKLKLEQFKPSEQVTLEPFERDHACVVGGYR 265 AEV+KLK E KP +Q+TLEP+ERDHA V+G YR Sbjct: 260 AEVQKLKEEGLKPEQQLTLEPYERDHAMVLGSYR 293 Score = 23.5 bits (49), Expect(2) = 1e-32 Identities = 9/14 (64%), Positives = 11/14 (78%) Frame = -3 Query: 577 IPIIEDARHPAKYR 536 +PII DAR P +YR Sbjct: 190 VPIIGDARKPQEYR 203
>FBRL_CANGA (Q6FN88) Fibrillarin| Length = 323 Score = 122 bits (305), Expect(2) = 7e-31 Identities = 61/93 (65%), Positives = 72/93 (77%) Frame = -1 Query: 546 QSTAMLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFA 367 Q MLVGMVD +F+DVAQPDQARI+ALN+ FLK+ G VISIKANCIDS E VFA Sbjct: 224 QKYRMLVGMVDAVFADVAQPDQARIIALNSHMFLKDQGGVVISIKANCIDSTVDAETVFA 283 Query: 366 AEVEKLKLEQFKPSEQVTLEPFERDHACVVGGY 268 EV+KL+ E+ KP EQ+TLEP+ERDH V+G Y Sbjct: 284 REVQKLREEKIKPLEQLTLEPYERDHCIVIGRY 316 Score = 31.6 bits (70), Expect(2) = 7e-31 Identities = 13/14 (92%), Positives = 13/14 (92%) Frame = -3 Query: 577 IPIIEDARHPAKYR 536 IPIIEDARHP KYR Sbjct: 214 IPIIEDARHPQKYR 227
>FBRL_YEAST (P15646) Fibrillarin (Nucleolar protein 1)| Length = 327 Score = 121 bits (304), Expect(2) = 9e-31 Identities = 61/93 (65%), Positives = 72/93 (77%) Frame = -1 Query: 546 QSTAMLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFA 367 Q ML+GMVD +F+DVAQPDQARI+ALN+ FLK+ G VISIKANCIDS E VFA Sbjct: 228 QKYRMLIGMVDCVFADVAQPDQARIIALNSHMFLKDQGGVVISIKANCIDSTVDAETVFA 287 Query: 366 AEVEKLKLEQFKPSEQVTLEPFERDHACVVGGY 268 EV+KL+ E+ KP EQ+TLEP+ERDH VVG Y Sbjct: 288 REVQKLREERIKPLEQLTLEPYERDHCIVVGRY 320 Score = 31.6 bits (70), Expect(2) = 9e-31 Identities = 13/14 (92%), Positives = 13/14 (92%) Frame = -3 Query: 577 IPIIEDARHPAKYR 536 IPIIEDARHP KYR Sbjct: 218 IPIIEDARHPQKYR 231
>FBRL_ASHGO (Q756P0) Fibrillarin| Length = 326 Score = 121 bits (304), Expect(2) = 9e-31 Identities = 60/93 (64%), Positives = 72/93 (77%) Frame = -1 Query: 546 QSTAMLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFA 367 Q ML+GMVD +F+DVAQPDQARI+ALN+ FLK+ G VISIKANCIDS E VFA Sbjct: 229 QKYRMLIGMVDAVFADVAQPDQARIIALNSHMFLKDQGGVVISIKANCIDSTVDAETVFA 288 Query: 366 AEVEKLKLEQFKPSEQVTLEPFERDHACVVGGY 268 EV+KL+ E+ KP EQ+TLEP+ERDH V+G Y Sbjct: 289 REVQKLREEKIKPLEQLTLEPYERDHCIVIGRY 321 Score = 31.6 bits (70), Expect(2) = 9e-31 Identities = 13/14 (92%), Positives = 13/14 (92%) Frame = -3 Query: 577 IPIIEDARHPAKYR 536 IPIIEDARHP KYR Sbjct: 219 IPIIEDARHPQKYR 232
>FBRL_DEBHA (Q6BQ34) Fibrillarin| Length = 329 Score = 122 bits (305), Expect(2) = 1e-30 Identities = 61/93 (65%), Positives = 72/93 (77%) Frame = -1 Query: 546 QSTAMLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFA 367 Q ML+GMVD +F+DVAQPDQARI+ALN+ FLK+ G VISIKANCIDS E VFA Sbjct: 230 QKYRMLIGMVDAVFADVAQPDQARIIALNSHLFLKDQGTVVISIKANCIDSTVDAETVFA 289 Query: 366 AEVEKLKLEQFKPSEQVTLEPFERDHACVVGGY 268 EV+KL+ E+ KP EQ+TLEP+ERDH VVG Y Sbjct: 290 REVQKLREERIKPLEQLTLEPYERDHCIVVGRY 322 Score = 30.4 bits (67), Expect(2) = 1e-30 Identities = 12/14 (85%), Positives = 13/14 (92%) Frame = -3 Query: 577 IPIIEDARHPAKYR 536 IPII+DARHP KYR Sbjct: 220 IPIIDDARHPQKYR 233
>FBRL_SCHPO (P35551) Fibrillarin| Length = 305 Score = 122 bits (305), Expect(2) = 9e-30 Identities = 60/94 (63%), Positives = 74/94 (78%) Frame = -1 Query: 549 LQSTAMLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVF 370 +Q MLVGMVDV+F+DVAQPDQARI+ALNA+ FLKN G VIS+KA+CIDS VF Sbjct: 208 VQKYRMLVGMVDVVFADVAQPDQARIVALNAAAFLKNEGGVVISVKASCIDSTADAAVVF 267 Query: 369 AAEVEKLKLEQFKPSEQVTLEPFERDHACVVGGY 268 A EV+K++ E+ KP EQ+TLEP+ERDH +VG Y Sbjct: 268 AREVKKMQEEKIKPQEQLTLEPYERDHCIIVGKY 301 Score = 27.7 bits (60), Expect(2) = 9e-30 Identities = 11/14 (78%), Positives = 12/14 (85%) Frame = -3 Query: 577 IPIIEDARHPAKYR 536 IPI+EDARH KYR Sbjct: 199 IPIVEDARHVQKYR 212
>FBRL_NEUCR (Q9HE26) Fibrillarin| Length = 323 Score = 117 bits (292), Expect(2) = 1e-27 Identities = 57/85 (67%), Positives = 70/85 (82%) Frame = -1 Query: 534 MLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEVE 355 ML+ MVDVIF+DVAQPDQARI+ +NA FLK GG +ISIKA+CIDS PE VFA+EV+ Sbjct: 227 MLLPMVDVIFADVAQPDQARIVGINAKLFLKQGGGLLISIKASCIDSTAPPEQVFASEVQ 286 Query: 354 KLKLEQFKPSEQVTLEPFERDHACV 280 KL+ ++F P EQ+TLEP+ERDHA V Sbjct: 287 KLREDKFFPKEQLTLEPYERDHAMV 311 Score = 25.4 bits (54), Expect(2) = 1e-27 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = -3 Query: 577 IPIIEDARHPAKYR 536 IPI+EDAR P YR Sbjct: 213 IPIVEDARKPMAYR 226
>FBRL_ENCCU (Q8SR42) Fibrillarin| Length = 291 Score = 113 bits (282), Expect(2) = 2e-27 Identities = 54/96 (56%), Positives = 70/96 (72%) Frame = -1 Query: 534 MLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEVE 355 MLV +VD IFSDV+QPDQ RI+ALNA YFLK GG +SIKANC++S E VFA EV Sbjct: 187 MLVPIVDCIFSDVSQPDQTRIVALNAQYFLKEGGGVDVSIKANCVNSAVPAETVFADEVN 246 Query: 354 KLKLEQFKPSEQVTLEPFERDHACVVGGYRMPKKQK 247 L+ +P EQVTLEPFE+DHA ++G +++ ++ Sbjct: 247 ILRKNSIRPKEQVTLEPFEKDHAMIIGRFKLSASEE 282 Score = 28.5 bits (62), Expect(2) = 2e-27 Identities = 10/14 (71%), Positives = 14/14 (100%) Frame = -3 Query: 577 IPIIEDARHPAKYR 536 +PIIEDAR+P++YR Sbjct: 173 VPIIEDARYPSRYR 186
>FBRL_GIALA (Q24957) Fibrillarin| Length = 327 Score = 100 bits (248), Expect(2) = 3e-23 Identities = 52/91 (57%), Positives = 65/91 (71%) Frame = -1 Query: 534 MLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEVE 355 M+V VD IFSDVAQPDQARI+A NA Y+LK G +ISIKA+ +DS PEAVFA E+E Sbjct: 234 MIVPEVDCIFSDVAQPDQARIVAENARYYLKANGGMLISIKASSVDSTLKPEAVFAREIE 293 Query: 354 KLKLEQFKPSEQVTLEPFERDHACVVGGYRM 262 L+ FK EQ+ + F R+HA VVG +R+ Sbjct: 294 TLREHDFKCKEQLDIGEFHRNHAIVVGRFRV 324 Score = 27.7 bits (60), Expect(2) = 3e-23 Identities = 11/15 (73%), Positives = 12/15 (80%) Frame = -3 Query: 574 PIIEDARHPAKYRNV 530 PII DARHP KYR + Sbjct: 221 PIIADARHPYKYRMI 235
>FLPA_METJA (Q58108) Fibrillarin-like pre-rRNA-processing protein| Length = 230 Score = 85.5 bits (210), Expect(2) = 3e-17 Identities = 44/91 (48%), Positives = 60/91 (65%) Frame = -1 Query: 546 QSTAMLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFA 367 Q A +V VDVI+ DVAQP+QA IL NA +FLK GG+ +I+IKA ID + P+ +F Sbjct: 135 QEYANIVEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFK 194 Query: 366 AEVEKLKLEQFKPSEQVTLEPFERDHACVVG 274 + E L+ FK ++V +EPFE+DH VG Sbjct: 195 EQKEILEAGGFKIVDEVDIEPFEKDHVMFVG 225 Score = 22.3 bits (46), Expect(2) = 3e-17 Identities = 8/16 (50%), Positives = 11/16 (68%) Frame = -3 Query: 577 IPIIEDARHPAKYRNV 530 IPI+ DA P +Y N+ Sbjct: 125 IPILGDANKPQEYANI 140
>FLPA_METVO (P35553) Fibrillarin-like pre-rRNA-processing protein| Length = 228 Score = 86.7 bits (213), Expect(2) = 4e-17 Identities = 43/88 (48%), Positives = 58/88 (65%) Frame = -1 Query: 537 AMLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEV 358 A +V VDVIF DVAQP+QA IL NA +FLK GG+ +ISIKA +D + P +F A+ Sbjct: 136 ANIVEKVDVIFEDVAQPNQAEILIKNAKWFLKKGGYGMISIKARSVDVTENPRVIFEAQK 195 Query: 357 EKLKLEQFKPSEQVTLEPFERDHACVVG 274 E ++ FK + + +EPFE+DH VG Sbjct: 196 EIMEQNGFKIVDAINIEPFEKDHMLFVG 223 Score = 20.8 bits (42), Expect(2) = 4e-17 Identities = 7/15 (46%), Positives = 10/15 (66%) Frame = -3 Query: 574 PIIEDARHPAKYRNV 530 PI+ DA P +Y N+ Sbjct: 124 PILGDANKPEEYANI 138
>FLPA_METKA (Q8TXU9) Fibrillarin-like pre-rRNA-processing protein| Length = 232 Score = 85.1 bits (209), Expect = 1e-16 Identities = 43/90 (47%), Positives = 58/90 (64%) Frame = -1 Query: 537 AMLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEV 358 A LV VDVI+ D+AQP QA ++A NA FL+ GG+ +++IKA ID + PE VF E Sbjct: 141 APLVEQVDVIYQDIAQPKQAEVVADNAEAFLRPGGYVIVAIKARSIDVTKEPEEVFEDEE 200 Query: 357 EKLKLEQFKPSEQVTLEPFERDHACVVGGY 268 KL+ F+ E + LEP+ERDH +V Y Sbjct: 201 RKLEERGFEVLEVIDLEPYERDHVGIVAEY 230
>FLPA_SULTO (Q971W2) Fibrillarin-like pre-rRNA-processing protein| Length = 233 Score = 82.8 bits (203), Expect(2) = 4e-16 Identities = 38/89 (42%), Positives = 58/89 (65%) Frame = -1 Query: 531 LVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEVEK 352 LV VDV++ D+AQPD+ I NA +FLKNGG+ +++IKA ID + P ++ EV K Sbjct: 143 LVEDVDVLYVDIAQPDETDIAIYNAKFFLKNGGYMMMAIKARSIDVTKEPTEIYEMEVNK 202 Query: 351 LKLEQFKPSEQVTLEPFERDHACVVGGYR 265 LK F + + L+P+++DHA V+ Y+ Sbjct: 203 LKENNFDVIQVIQLDPYDKDHAMVLAKYK 231 Score = 21.2 bits (43), Expect(2) = 4e-16 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = -3 Query: 574 PIIEDARHPAKYRNV 530 PI+ DAR P YR + Sbjct: 129 PILADARFPQYYRTL 143
>FLPA_METMP (Q6LZM7) Fibrillarin-like pre-rRNA-processing protein| Length = 230 Score = 81.6 bits (200), Expect(2) = 6e-16 Identities = 42/91 (46%), Positives = 59/91 (64%) Frame = -1 Query: 546 QSTAMLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFA 367 Q + +V VDVIF DVAQP+QA IL NA +FLK G+ +ISIKA +D + P +FA Sbjct: 135 QDYSNIVEKVDVIFEDVAQPNQAEILVKNAKWFLKENGYAMISIKARSVDVTKNPREIFA 194 Query: 366 AEVEKLKLEQFKPSEQVTLEPFERDHACVVG 274 + + L F+ ++V +EPFE+DH +VG Sbjct: 195 EQKKILIEGGFEIVDEVNIEPFEKDHMMMVG 225 Score = 21.6 bits (44), Expect(2) = 6e-16 Identities = 7/16 (43%), Positives = 10/16 (62%) Frame = -3 Query: 577 IPIIEDARHPAKYRNV 530 IP++ DA P Y N+ Sbjct: 125 IPVLGDANRPQDYSNI 140
>FLPA_PYRAB (Q9V2L5) Fibrillarin-like pre-rRNA-processing protein| Length = 227 Score = 82.0 bits (201), Expect = 1e-15 Identities = 45/85 (52%), Positives = 58/85 (68%) Frame = -1 Query: 531 LVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEVEK 352 LV VDVIF DVAQP QA+IL NA +LK GG+ +I++K+ ID + PE VF EVEK Sbjct: 140 LVPKVDVIFEDVAQPTQAKILIDNAEVYLKKGGYGMIAVKSRSIDVTKEPEQVF-REVEK 198 Query: 351 LKLEQFKPSEQVTLEPFERDHACVV 277 E F+ E++ LEP+E+DHA V Sbjct: 199 ELSEYFEVIERLNLEPYEKDHALFV 223
>FLPA_PYRKO (Q5JFN1) Fibrillarin-like pre-rRNA-processing protein| Length = 226 Score = 81.6 bits (200), Expect = 1e-15 Identities = 45/85 (52%), Positives = 59/85 (69%) Frame = -1 Query: 531 LVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEVEK 352 LV VDVIF DVAQP QA+IL NA +LK+GG+ +IS+K+ ID + PE VF EVEK Sbjct: 139 LVPKVDVIFEDVAQPTQAKILIDNAKVYLKSGGYGMISVKSRSIDVTKEPEQVF-KEVEK 197 Query: 351 LKLEQFKPSEQVTLEPFERDHACVV 277 F+ E+++LEP+E+DHA V Sbjct: 198 ELSTYFEVVERLSLEPYEKDHALFV 222
>FLPA_PYRFU (Q8U4M2) Fibrillarin-like pre-rRNA-processing protein| Length = 227 Score = 80.5 bits (197), Expect(2) = 2e-15 Identities = 44/85 (51%), Positives = 58/85 (68%) Frame = -1 Query: 531 LVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEVEK 352 LV VDVIF DVAQP QA+IL NA +LK GG+ +I++K+ ID + PE VF EVE+ Sbjct: 140 LVTKVDVIFEDVAQPTQAKILIDNAKAYLKRGGYGMIAVKSRSIDVTKEPEQVF-KEVER 198 Query: 351 LKLEQFKPSEQVTLEPFERDHACVV 277 E F+ E++ LEP+E+DHA V Sbjct: 199 ELSEYFEVIERLNLEPYEKDHALFV 223 Score = 20.8 bits (42), Expect(2) = 2e-15 Identities = 8/14 (57%), Positives = 10/14 (71%) Frame = -3 Query: 577 IPIIEDARHPAKYR 536 IPI+ DA P +YR Sbjct: 125 IPILGDATKPEEYR 138
>FLPA_PYRHO (O57811) Fibrillarin-like pre-rRNA-processing protein| Length = 227 Score = 80.9 bits (198), Expect = 2e-15 Identities = 44/85 (51%), Positives = 58/85 (68%) Frame = -1 Query: 531 LVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEVEK 352 LV VDVIF DVAQP QA+IL NA +LK GG+ +I++K+ ID + PE VF EVE+ Sbjct: 140 LVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVF-REVER 198 Query: 351 LKLEQFKPSEQVTLEPFERDHACVV 277 E F+ E++ LEP+E+DHA V Sbjct: 199 ELSEYFEVIERLNLEPYEKDHALFV 223
>FLPA_METVA (P35552) Fibrillarin-like pre-rRNA-processing protein| Length = 230 Score = 78.6 bits (192), Expect(2) = 3e-15 Identities = 40/86 (46%), Positives = 55/86 (63%) Frame = -1 Query: 531 LVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEVEK 352 +VG VDVIF DVAQP+QA IL NA +FL G+ +ISIKA ID + P+ +F + + Sbjct: 140 IVGKVDVIFEDVAQPNQAEILVKNAKWFLNKDGYAMISIKARSIDVTKNPKEIFLEQKKI 199 Query: 351 LKLEQFKPSEQVTLEPFERDHACVVG 274 L F +++ +EPFE+DH VG Sbjct: 200 LIEGGFDIVDEINIEPFEKDHIMFVG 225 Score = 22.3 bits (46), Expect(2) = 3e-15 Identities = 8/16 (50%), Positives = 11/16 (68%) Frame = -3 Query: 577 IPIIEDARHPAKYRNV 530 IPI+ DA P +Y N+ Sbjct: 125 IPILGDANRPFEYSNI 140
>FLPA_SULSO (P58032) Fibrillarin-like pre-rRNA-processing protein| Length = 232 Score = 79.7 bits (195), Expect = 5e-15 Identities = 38/94 (40%), Positives = 59/94 (62%) Frame = -1 Query: 546 QSTAMLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFA 367 QS +V VDV++ D+AQPDQ I NA +FLK G ++ IKA ID + P+ ++ Sbjct: 138 QSYKSVVENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYK 197 Query: 366 AEVEKLKLEQFKPSEQVTLEPFERDHACVVGGYR 265 EVEKL+ F+ + + L+P+++DHA V+ Y+ Sbjct: 198 TEVEKLENSNFETIQIINLDPYDKDHAIVLSKYK 231
>FLPA_METMA (O53133) Fibrillarin-like pre-rRNA-processing protein| Length = 227 Score = 75.9 bits (185), Expect = 8e-14 Identities = 46/103 (44%), Positives = 62/103 (60%), Gaps = 4/103 (3%) Frame = -1 Query: 573 PSLRMLGTLQSTAMLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDS 394 P L G S A +V VDVIF DVAQP+QA I A NA FLK G+ ++SIKA ID+ Sbjct: 121 PILADAGKPDSYAHIVEPVDVIFQDVAQPNQAEIAARNAVRFLKKDGYLLLSIKARSIDT 180 Query: 393 IQAPEAVFAAEVEKLKLEQFKPSEQV----TLEPFERDHACVV 277 +P+ +F EV+KL+ + F+P +V L P+ DH V+ Sbjct: 181 AASPKEIFKEEVKKLE-QAFEPGFEVLTARELMPYHEDHLGVM 222
>FLPA_AERPE (Q9Y9U3) Fibrillarin-like pre-rRNA-processing protein| Length = 233 Score = 71.6 bits (174), Expect(2) = 1e-13 Identities = 35/84 (41%), Positives = 55/84 (65%) Frame = -1 Query: 531 LVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEVEK 352 LV VD +++DVAQP+QA I+ NA +FL++GG+ +++IKA ID P V+ E++ Sbjct: 144 LVEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKT 203 Query: 351 LKLEQFKPSEQVTLEPFERDHACV 280 L + + V L+PF+RDHA + Sbjct: 204 LMDGGLEIKDVVHLDPFDRDHAMI 227 Score = 23.9 bits (50), Expect(2) = 1e-13 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = -3 Query: 574 PIIEDARHPAKYRNV 530 PI+ DAR P KYR++ Sbjct: 130 PILGDARFPEKYRHL 144
>FLPA_SULAC (Q9P9M0) Fibrillarin-like pre-rRNA-processing protein| Length = 231 Score = 74.3 bits (181), Expect = 2e-13 Identities = 34/89 (38%), Positives = 57/89 (64%) Frame = -1 Query: 531 LVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEVEK 352 LV VD+++ D+AQP++ I NA +FLK G+ +I+IK+ ID + P ++ AE +K Sbjct: 143 LVENVDIVYVDIAQPNETEIAMYNARFFLKKNGYMMIAIKSRSIDVTKDPREIYNAEAKK 202 Query: 351 LKLEQFKPSEQVTLEPFERDHACVVGGYR 265 L+ F E + L+P+++DHA +V Y+ Sbjct: 203 LEDAGFDIREVLELDPYDKDHAMIVVKYK 231
>FLPA_PYRAE (Q8ZTI9) Fibrillarin-like pre-rRNA-processing protein| Length = 235 Score = 74.3 bits (181), Expect = 2e-13 Identities = 41/85 (48%), Positives = 50/85 (58%) Frame = -1 Query: 519 VDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEVEKLKLE 340 VDV++ DVAQP QA+ILA NA YFLK GGH ++ IKA ID F E+ LK Sbjct: 151 VDVVYIDVAQPAQAKILADNADYFLKPGGHVMLVIKAMSIDVTAPATETFKQEINTLKER 210 Query: 339 QFKPSEQVTLEPFERDHACVVGGYR 265 F E V LEP++ HA V+ R Sbjct: 211 GFDILETVHLEPYDTAHAMVIAKKR 235
>FLPA_METAC (Q8TTT4) Fibrillarin-like pre-rRNA-processing protein| Length = 227 Score = 73.9 bits (180), Expect = 3e-13 Identities = 43/103 (41%), Positives = 62/103 (60%), Gaps = 4/103 (3%) Frame = -1 Query: 573 PSLRMLGTLQSTAMLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDS 394 P L G S A +V VD+IF DVAQP+QA I A NA+ FL G+ ++SIKA ID+ Sbjct: 121 PILADAGKPDSYAHIVEPVDLIFQDVAQPNQAEIAARNAARFLNKNGYLLLSIKARSIDT 180 Query: 393 IQAPEAVFAAEVEKLKLEQFKPSEQV----TLEPFERDHACVV 277 +P+ +F EV+KL+ + F+P ++ L P+ DH V+ Sbjct: 181 AASPKEIFKEEVKKLE-QAFEPGFEILTARDLMPYHEDHLGVL 222
>FLPA_METTH (O27283) Fibrillarin-like pre-rRNA-processing protein| Length = 224 Score = 73.6 bits (179), Expect = 4e-13 Identities = 36/85 (42%), Positives = 52/85 (61%) Frame = -1 Query: 531 LVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEVEK 352 +V D+++ DVAQPDQ R+ N FLK G+ +I IKA ID ++P +F EV K Sbjct: 135 MVEAADLVYCDVAQPDQTRLFIENMDCFLKRDGYGLIMIKARSIDVTRSPRKIFREEVGK 194 Query: 351 LKLEQFKPSEQVTLEPFERDHACVV 277 L+ F+ +QV L P+E+DH V+ Sbjct: 195 LESSGFRIIDQVGLNPYEKDHMAVL 219
>FLPA_METWO (Q9HH35) Fibrillarin-like pre-rRNA-processing protein| Length = 222 Score = 68.9 bits (167), Expect = 1e-11 Identities = 32/85 (37%), Positives = 52/85 (61%) Frame = -1 Query: 531 LVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEVEK 352 +V D+++ DVAQPDQ + N FLK+ G+ +I +KA ID ++P +F E K Sbjct: 133 MVENADLVYCDVAQPDQTGLFIRNMDCFLKDDGYGLIMVKARSIDVTRSPRKIFREEAGK 192 Query: 351 LKLEQFKPSEQVTLEPFERDHACVV 277 L+ F+ +QV L+P+E+DH ++ Sbjct: 193 LRDSGFRIIDQVGLKPYEKDHMAIL 217
>FLPA_ARCFU (O28192) Fibrillarin-like pre-rRNA-processing protein| Length = 210 Score = 64.7 bits (156), Expect = 2e-10 Identities = 34/81 (41%), Positives = 50/81 (61%) Frame = -1 Query: 531 LVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEVEK 352 +V VD+I+ D+AQ +Q IL NA +FLK G VI +KA IDS PE VF + +++ Sbjct: 123 IVEKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKE 182 Query: 351 LKLEQFKPSEQVTLEPFERDH 289 ++ FK + +L P+ RDH Sbjct: 183 ME-GDFKIVKHGSLMPYHRDH 202
>FLPA_NANEQ (Q74N89) Fibrillarin-like pre-rRNA-processing protein| Length = 232 Score = 55.8 bits (133), Expect = 8e-08 Identities = 30/92 (32%), Positives = 48/92 (52%) Frame = -1 Query: 531 LVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEVEK 352 +V DVI+ DVAQP Q I N +F K +++KA ID + P+ +F K Sbjct: 141 IVVQSDVIYQDVAQPHQVEIFLKNLRFFAKPNAIGFLAVKARSIDVTKDPKVIFREVERK 200 Query: 351 LKLEQFKPSEQVTLEPFERDHACVVGGYRMPK 256 L+ + + E + L+P+ +DH V ++PK Sbjct: 201 LREAKLQLLESIRLDPYHKDHMMFV--VKVPK 230
>FLPA_HALMA (Q5V3Q6) Fibrillarin-like pre-rRNA-processing protein| Length = 210 Score = 50.8 bits (120), Expect = 3e-06 Identities = 35/99 (35%), Positives = 51/99 (51%) Frame = -1 Query: 573 PSLRMLGTLQSTAMLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDS 394 P L+ +S A +V VDV+ DVA QAR+ LN FL + G + +IKA D Sbjct: 108 PLLKDARKPESYAHVVEPVDVVVQDVATRGQARVATLN-KQFLTDDGRLLAAIKARSEDV 166 Query: 393 IQAPEAVFAAEVEKLKLEQFKPSEQVTLEPFERDHACVV 277 P+AVF + +L E ++ E L+P+ DH +V Sbjct: 167 TADPDAVFDSVRAELSAE-YELLETARLDPYHEDHLGIV 204
>FLPA_HALSA (Q9HQG3) Fibrillarin-like pre-rRNA-processing protein| Length = 210 Score = 43.1 bits (100), Expect = 6e-04 Identities = 29/81 (35%), Positives = 41/81 (50%) Frame = -1 Query: 519 VDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSIQAPEAVFAAEVEKLKLE 340 VD I DVA QA + AL+ FL + G V ++KA D P AVF + +L+ + Sbjct: 128 VDAIVQDVATRGQADV-ALSNRQFLADDGRLVAALKARSEDVTADPAAVFEDLLGRLR-D 185 Query: 339 QFKPSEQVTLEPFERDHACVV 277 ++ +EPF DH VV Sbjct: 186 GYEVRATARMEPFHEDHLAVV 206
>FLPA_PICTO (Q6KZQ5) Fibrillarin-like pre-rRNA-processing protein| Length = 212 Score = 33.1 bits (74), Expect = 0.59 Identities = 22/92 (23%), Positives = 40/92 (43%) Frame = -1 Query: 573 PSLRMLGTLQSTAMLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDS 394 P L ++ V D I+ D+AQ +Q +I NA F +I IKA I S Sbjct: 115 PILEDANLVERYKFFVEKCDFIYQDIAQRNQVQIFNQNADIFKPRSAILIIKIKA--ISS 172 Query: 393 IQAPEAVFAAEVEKLKLEQFKPSEQVTLEPFE 298 + + + + ++ ++ E + L P++ Sbjct: 173 KEPEKKILKETISSIR--KYNIKEIIDLRPYD 202
>GLGB_ASPOR (Q96VA4) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen| branching enzyme) Length = 689 Score = 30.0 bits (66), Expect = 5.0 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 7/55 (12%) Frame = +2 Query: 104 SATYQHHINHLGYRTNIVGSYHQHLGPNTNKR-------*NIIAHNIYNYCLQVA 247 S Y HH G T G YH++ G + ++ N + HN+Y C+ VA Sbjct: 349 SMLYTHH----GIGTGFSGGYHEYFGSSVDEEGVMYLTLANEMLHNLYPNCITVA 399
>SYN_BUCAI (P57441) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 466 Score = 29.6 bits (65), Expect = 6.5 Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Frame = +2 Query: 26 VQMRQVMV-SWITLPTSQQLLTRMQNHSATYQHHINHLGYRTNIVGS 163 +Q++++ V W+ P + + ++ HS Y + HL RTN++G+ Sbjct: 92 IQLKKIKVLGWVENPETYPISSK--KHSTEYLREVAHLRSRTNLIGA 136 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,505,733 Number of Sequences: 219361 Number of extensions: 1438404 Number of successful extensions: 3430 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 3306 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3422 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4929664480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
