ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd21f18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SAPKA_ORYSA (Q75H77) Serine/threonine-protein kinase SAPK10 (EC ... 76 7e-14
2SAPK9_ORYSA (Q75V57) Serine/threonine-protein kinase SAPK9 (EC 2... 71 2e-12
3SAPK8_ORYSA (Q7Y0B9) Serine/threonine-protein kinase SAPK8 (EC 2... 69 1e-11
4CTR1_OCTVU (Q7YW31) Cephalotocin receptor 1 (OT/VP superfamily p... 29 7.4
5TMM28_HUMAN (O75949) Transmembrane protein 28 (TED protein) 29 9.6

>SAPKA_ORYSA (Q75H77) Serine/threonine-protein kinase SAPK10 (EC 2.7.11.1)|
           (Osmotic stress/abscisic acid-activated protein kinase
           10)
          Length = 362

 Score = 75.9 bits (185), Expect = 7e-14
 Identities = 46/69 (66%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
 Frame = -2

Query: 539 SSQYEXPEQPMQSMDEIMQILAEATIPAAGS-RINQFXXXXXXXXXXXXXXXXXXXXDVE 363
           SSQYE PEQPMQSMDEIMQILAEATIPAAGS  INQF                    DVE
Sbjct: 294 SSQYEEPEQPMQSMDEIMQILAEATIPAAGSGGINQFLNDGLDLDDDMEDLDSDPDLDVE 353

Query: 362 SSGEIVYAM 336
           SSGEIVYAM
Sbjct: 354 SSGEIVYAM 362



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>SAPK9_ORYSA (Q75V57) Serine/threonine-protein kinase SAPK9 (EC 2.7.11.1)|
           (Osmotic stress/abscisic acid-activated protein kinase
           9)
          Length = 361

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 41/69 (59%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
 Frame = -2

Query: 539 SSQYEXPEQPMQSMDEIMQILAEATIPAAG-SRINQFXXXXXXXXXXXXXXXXXXXXDVE 363
           S+QYE P+QPMQ+M+EIMQILAEATIPAAG S INQF                    D+E
Sbjct: 293 SNQYEEPDQPMQNMNEIMQILAEATIPAAGTSGINQFLTDSLDLDDDMEDMDSDLDLDIE 352

Query: 362 SSGEIVYAM 336
           SSGEIVYAM
Sbjct: 353 SSGEIVYAM 361



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>SAPK8_ORYSA (Q7Y0B9) Serine/threonine-protein kinase SAPK8 (EC 2.7.11.1)|
           (Osmotic stress/abscisic acid-activated protein kinase
           8)
          Length = 371

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 38/68 (55%), Positives = 42/68 (61%)
 Frame = -2

Query: 539 SSQYEXPEQPMQSMDEIMQILAEATIPAAGSRINQFXXXXXXXXXXXXXXXXXXXXDVES 360
           SSQYE P+QPMQ+MD+IMQIL EATIP A SRIN                      DV+S
Sbjct: 304 SSQYEEPDQPMQTMDQIMQILTEATIPPACSRINHILTDGLDLDDDMDDLDSDSDIDVDS 363

Query: 359 SGEIVYAM 336
           SGEIVYAM
Sbjct: 364 SGEIVYAM 371



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>CTR1_OCTVU (Q7YW31) Cephalotocin receptor 1 (OT/VP superfamily peptide|
           receptor-1) (OC/CE-R 1)
          Length = 397

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = -1

Query: 318 SHIS*PKDGQDTRGRD-RYLEATAEVRLLMLDSPQMLLCCCFCCWSLYFRC 169
           SH++     +D  G+   Y    +  ++  +     ++ CCF CWS +F C
Sbjct: 264 SHLARGFSEEDMEGQSVNYNRGISRAKVRSVALTLSVVACCFICWSPFFVC 314



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>TMM28_HUMAN (O75949) Transmembrane protein 28 (TED protein)|
          Length = 473

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 228 DSPQMLLCCCFCCWS 184
           D+  + +CCC CCW+
Sbjct: 12  DAAALTICCCCCCWA 26


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,569,107
Number of Sequences: 219361
Number of extensions: 990530
Number of successful extensions: 2317
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2310
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4258037034
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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