ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd21f17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT018985.1| Zea mays clone Contig433.F mRNA sequence 52 0.002
2dbj|AB229091.1| Aspergillus oryzae cDNA, contig sequence: AoEST5969 48 0.036
3dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 48 0.036
4gb|BC027975.1| Homo sapiens receptor (calcitonin) activity modif... 44 0.57
5emb|AL357559.16| Human DNA sequence from clone RP11-393M18 on ch... 44 0.57
6emb|CR621805.1| full-length cDNA clone CS0DN004YF21 of Adult bra... 44 0.57
7emb|CR590147.1| full-length cDNA clone CS0DI042YM05 of Placenta ... 44 0.57
8gb|AY265458.1| Homo sapiens receptor calcitonin activity modifyi... 44 0.57
9gb|AC100793.8| Homo sapiens chromosome 17, clone CTD-3193K9, com... 44 0.57
10gb|AC154262.1| Mus musculus chromosome 14 clone RP24-304G19, com... 42 2.2
11gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence 42 2.2
12gb|AC159436.1| Trypanosoma brucei chromosome 5 clone RPCI93-29K2... 42 2.2
13gb|AC091274.11| Mus musculus chromosome 5, clone RP23-149A1, com... 42 2.2
14gb|AC125291.3| Drosophila melanogaster X BAC CH221-17A11 (CHORI ... 42 2.2
15ref|XM_819370.1| Trypanosoma brucei TREU927 clone RPCI93-29K2 hy... 42 2.2
16gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate h... 42 2.2
17emb|BX571865.1| Photorhabdus luminescens subsp. laumondii TTO1 c... 42 2.2
18gb|AC023723.4| Drosophila melanogaster X BAC RP98-48E6 (Roswell ... 42 2.2
19gb|AC023709.4| Drosophila melanogaster X BAC RP98-10I17 (Roswell... 42 2.2
20ref|NM_132413.1| Drosophila melanogaster CG15295-RA (CG15295), mRNA 42 2.2
21gb|AC159306.2| Mus musculus BAC clone RP23-206B2 from chromosome... 42 2.2
22dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
23ref|NM_214082.1| Sus scrofa receptor activity-modifying protein ... 42 2.2
24gb|AC016889.28| Homo sapiens chromosome 17, clone RP11-506G7, co... 42 2.2
25gb|AC010183.6| Homo sapiens 12 BAC RP11-100F15 (Roswell Park Can... 42 2.2
26dbj|AP005967.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
27gb|AE003451.5| Drosophila melanogaster chromosome X, section 35 ... 42 2.2
28emb|CT571274.6| Mouse DNA sequence from clone RP24-142M17 on chr... 42 2.2
29dbj|AB090164.1| Sus scrofa mRNA for receptor activity-modifying ... 42 2.2
30gb|AY609864.1| Sus scrofa clone Clu_36690.scr.msk.p1.Contig2, mR... 42 2.2
31emb|AL611984.15| Mouse DNA sequence from clone RP23-416J8 on chr... 42 2.2
32gb|DQ470474.1| Homo sapiens scaffold attachment factor A2 mRNA, ... 40 8.9
33ref|XM_988398.1| PREDICTED: Mus musculus hypothetical protein LO... 40 8.9
34ref|XM_977766.1| PREDICTED: Mus musculus hypothetical protein LO... 40 8.9
35ref|XM_286373.5| PREDICTED: Mus musculus RIKEN cDNA 1810010H24 g... 40 8.9
36gb|AF477624.1| Lilium longiflorum desiccation-associated protein... 40 8.9
37ref|XM_814751.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.9
38emb|Z98755.1|HS76C18 Human DNA sequence from clone RP1-76C18 on ... 40 8.9
39emb|AL662924.24| Human DNA sequence from clone RP11-108J9 on chr... 40 8.9
40gb|BC029105.1| Homo sapiens heterogeneous nuclear ribonucleoprot... 40 8.9
41gb|BT010301.1| Drosophila melanogaster LD09626 full insert cDNA 40 8.9
42emb|AL133382.8| Human DNA sequence from clone RP5-1156J9 on chro... 40 8.9
43gb|AC095904.7| Rattus norvegicus 9 BAC CH230-10L20 (Children's H... 40 8.9
44gb|CP000088.1| Thermobifida fusca YX, complete genome 40 8.9
45gb|AC084116.7| Homo sapiens chromosome 8, clone RP11-103H7, comp... 40 8.9
46gb|AC163014.5| Mus musculus chromosome 8, clone RP23-216D14, com... 40 8.9
47emb|AJ585522.1| Cucumber mosaic virus 3a gene for movement prote... 40 8.9
48emb|AJ585518.1| Cucumber mosaic virus 3a gene for movement prote... 40 8.9
49emb|CR749576.1| Homo sapiens mRNA; cDNA DKFZp686N1631 (from clon... 40 8.9
50gb|AC093958.2| Drosophila melanogaster 3L BAC RP98-48M7 (Roswell... 40 8.9
51dbj|AK124287.1| Homo sapiens cDNA FLJ42293 fis, clone TLIVE20079... 40 8.9
52dbj|AK122942.1| Homo sapiens cDNA FLJ16651 fis, clone TESTI40364... 40 8.9
53ref|NM_168064.2| Drosophila melanogaster CG14998-RA, transcript ... 40 8.9
54ref|NM_168063.2| Drosophila melanogaster CG14998-RD, transcript ... 40 8.9
55ref|NM_168062.2| Drosophila melanogaster CG14998-RE, transcript ... 40 8.9
56ref|NM_168061.2| Drosophila melanogaster CG14998-RB, transcript ... 40 8.9
57ref|NM_139604.2| Drosophila melanogaster CG14998-RC, transcript ... 40 8.9
58gb|AC093840.4| Homo sapiens BAC clone RP11-433O3 from 4, complet... 40 8.9
59ref|NM_198459.2| Homo sapiens DENN/MADD domain containing 2C (DE... 40 8.9
60ref|XM_938301.1| PREDICTED: Homo sapiens heterogeneous nuclear r... 40 8.9
61ref|XM_495877.2| PREDICTED: Homo sapiens heterogeneous nuclear r... 40 8.9
62gb|AY817054.1| Haliaeetus albicilla clone Hal 15 microsatellite ... 40 8.9
63gb|AY974337.1| Cucumber mosaic virus coat protein mRNA, complete... 40 8.9
64gb|AC087217.1|AC087217 Mus musculus chromosome 17 clone GS-384N1... 40 8.9
65gb|AF523342.1| Cucumber mosaic virus isolate C18 coat protein ge... 40 8.9
66gb|AC092576.3| Homo sapiens BAC clone RP11-7N16 from 2, complete... 40 8.9
67dbj|AP003543.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
68emb|BX647950.1|HSM808096 Homo sapiens mRNA; cDNA DKFZp686G0351 (... 40 8.9
69dbj|AK121569.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.9
70dbj|AK109927.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.9
71dbj|AK107048.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.9
72gb|AC107835.8| Mus musculus chromosome 8, clone RP23-267M21, com... 40 8.9
73gb|AE003480.4| Drosophila melanogaster chromosome 3L, section 14... 40 8.9
74dbj|AP001458.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.9
75dbj|AP003174.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.9
76gb|AC164567.5| Mus musculus BAC clone RP23-64B8 from chromosome ... 40 8.9
77emb|CR974466.14| Mouse DNA sequence from clone RP23-331E12 on ch... 40 8.9
78emb|AL596116.14| Mouse DNA sequence from clone RP23-317F9 on chr... 40 8.9
79dbj|AP001160.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 8.9 
>gb|BT018985.1| Zea mays clone Contig433.F mRNA sequence
          Length = 1273

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 594 tctgggacgggcgcgtttattccagggaactccaccgtcatc 635
           ||||||| ||| ||||||||||||||||| ||||| ||||||
Sbjct: 616 tctgggatgggggcgtttattccagggaattccactgtcatc 575
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>dbj|AB229091.1| Aspergillus oryzae cDNA, contig sequence: AoEST5969
          Length = 391

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 539 ggaggactgaagaggaggaggcggagcg 566
           |||||| |||||||||||||||||||||
Sbjct: 45  ggaggattgaagaggaggaggcggagcg 72
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>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011
          Length = 2505489

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                           
Query: 539     ggaggactgaagaggaggaggcggagcg 566
               |||||| |||||||||||||||||||||
Sbjct: 2118292 ggaggattgaagaggaggaggcggagcg 2118265
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>gb|BC027975.1| Homo sapiens receptor (calcitonin) activity modifying protein 2,
           mRNA (cDNA clone MGC:34448 IMAGE:5229167), complete cds
          Length = 757

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 550 gaggaggaggcggagcgctgcc 571
           ||||||||||||||||||||||
Sbjct: 104 gaggaggaggcggagcgctgcc 83
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>emb|AL357559.16| Human DNA sequence from clone RP11-393M18 on chromosome 1 Contains a
              novel pseudogene, a farnesyl diphosphate synthase (farnesyl
              pyrophosphate synthetase, dimethylallyltranstransferase,
              geranyltranstransferase) (FDPS) pseudogene, a novel gene
              (LOC339476) and the 5' end of a solute carrier family 4
              (anion exchanger) member 1 adaptor protein (SLC4A1AP)
              pseudogene, complete sequence
          Length = 190912

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 91     gtgtttcaaaataacatctact 112
              ||||||||||||||||||||||
Sbjct: 167486 gtgtttcaaaataacatctact 167507
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>emb|CR621805.1| full-length cDNA clone CS0DN004YF21 of Adult brain of Homo sapiens
           (human)
          Length = 636

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 550 gaggaggaggcggagcgctgcc 571
           ||||||||||||||||||||||
Sbjct: 126 gaggaggaggcggagcgctgcc 105
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>emb|CR590147.1| full-length cDNA clone CS0DI042YM05 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 792

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 550 gaggaggaggcggagcgctgcc 571
           ||||||||||||||||||||||
Sbjct: 162 gaggaggaggcggagcgctgcc 141
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>gb|AY265458.1| Homo sapiens receptor calcitonin activity modifying protein 2
           (RAMP2) mRNA, complete cds
          Length = 528

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 550 gaggaggaggcggagcgctgcc 571
           ||||||||||||||||||||||
Sbjct: 87  gaggaggaggcggagcgctgcc 66
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>gb|AC100793.8| Homo sapiens chromosome 17, clone CTD-3193K9, complete sequence
          Length = 134465

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 550   gaggaggaggcggagcgctgcc 571
             ||||||||||||||||||||||
Sbjct: 99121 gaggaggaggcggagcgctgcc 99100
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>gb|AC154262.1| Mus musculus chromosome 14 clone RP24-304G19, complete sequence
          Length = 162962

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 534    gaggaggaggactgaagaggaggag 558
              ||||||||||| |||||||||||||
Sbjct: 103126 gaggaggaggaatgaagaggaggag 103150
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>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence
          Length = 1608198

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 227    cattcacctcctgttgctgctgtag 251
              |||||||||||||||||| ||||||
Sbjct: 179155 cattcacctcctgttgcttctgtag 179179
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>gb|AC159436.1| Trypanosoma brucei chromosome 5 clone RPCI93-29K2, complete sequence
          Length = 135147

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 227    cattcacctcctgttgctgctgtag 251
              |||||||||||||||||| ||||||
Sbjct: 117029 cattcacctcctgttgcttctgtag 117053
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>gb|AC091274.11| Mus musculus chromosome 5, clone RP23-149A1, complete sequence
          Length = 212532

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 540   gaggactgaagaggaggaggcggag 564
             |||||||||||||||||||| ||||
Sbjct: 83709 gaggactgaagaggaggaggaggag 83685
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>gb|AC125291.3| Drosophila melanogaster X BAC CH221-17A11 (CHORI Sheared BAC Drosophila
              melanogaster library) complete sequence
          Length = 166613

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                               
Query: 533    cgaggaggaggactgaagaggaggaggcggagc 565
              ||||||||||||| ||||||||||||| |||||
Sbjct: 150190 cgaggaggaggac-gaagaggaggaggaggagc 150221
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>ref|XM_819370.1| Trypanosoma brucei TREU927 clone RPCI93-29K2 hypothetical protein
            (Tb927.5.570) partial mRNA
          Length = 6384

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 227  cattcacctcctgttgctgctgtag 251
            |||||||||||||||||| ||||||
Sbjct: 2884 cattcacctcctgttgcttctgtag 2860
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>gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exons 6
              through 10 and partial cds
          Length = 688489

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 241    tgctgctgtagtagtgcctgt 261
              |||||||||||||||||||||
Sbjct: 538993 tgctgctgtagtagtgcctgt 538973
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>emb|BX571865.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
              7/17
          Length = 348813

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 156    tatgatattctgagcaaattt 176
              |||||||||||||||||||||
Sbjct: 249065 tatgatattctgagcaaattt 249085
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>gb|AC023723.4| Drosophila melanogaster X BAC RP98-48E6 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 179363

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                              
Query: 533   cgaggaggaggactgaagaggaggaggcggagc 565
             ||||||||||||| ||||||||||||| |||||
Sbjct: 13447 cgaggaggaggac-gaagaggaggaggaggagc 13478
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>gb|AC023709.4| Drosophila melanogaster X BAC RP98-10I17 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 163710

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                               
Query: 533    cgaggaggaggactgaagaggaggaggcggagc 565
              ||||||||||||| ||||||||||||| |||||
Sbjct: 111494 cgaggaggaggac-gaagaggaggaggaggagc 111525
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>ref|NM_132413.1| Drosophila melanogaster CG15295-RA (CG15295), mRNA
          Length = 2288

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                            
Query: 533 cgaggaggaggactgaagaggaggaggcggagc 565
           ||||||||||||| ||||||||||||| |||||
Sbjct: 690 cgaggaggaggac-gaagaggaggaggaggagc 721
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>gb|AC159306.2| Mus musculus BAC clone RP23-206B2 from chromosome 14, complete sequence
          Length = 194660

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 241   tgctgctgtagtagtgcctgt 261
             |||||||||||||||||||||
Sbjct: 41797 tgctgctgtagtagtgcctgt 41777
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                            
Query: 556      gaggcggagcgctgccccatagccaagggtcgccgttctctgggacgggcgcgtttattc 615
                ||||||||| |||| |||| |||||  |||| || || ||||| | |||  | |||||||
Sbjct: 17061418 gaggcggagtgctgtcccagagccagcggtcaccattttctggaatggggccatttattc 17061359

                                 
Query: 616      cagggaactccaccgtc 632
                ||||||| |||||||||
Sbjct: 17061358 cagggaattccaccgtc 17061342



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                                
Query: 533      cgaggaggaggactgaagaggaggaggcggag 564
                ||||||||||||| ||||||||||||| ||||
Sbjct: 12269362 cgaggaggaggac-gaagaggaggaggaggag 12269332
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>ref|NM_214082.1| Sus scrofa receptor activity-modifying protein 2 (RAMP2), mRNA
          Length = 750

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 551 aggaggaggcggagcgctgcc 571
           |||||||||||||||||||||
Sbjct: 109 aggaggaggcggagcgctgcc 89
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>gb|AC016889.28| Homo sapiens chromosome 17, clone RP11-506G7, complete sequence
          Length = 187723

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 551   aggaggaggcggagcgctgcc 571
             |||||||||||||||||||||
Sbjct: 26974 aggaggaggcggagcgctgcc 26954
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>gb|AC010183.6| Homo sapiens 12 BAC RP11-100F15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 175504

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 228    attcacctcctgttgctgctg 248
              |||||||||||||||||||||
Sbjct: 149322 attcacctcctgttgctgctg 149302
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>dbj|AP005967.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1089G05
          Length = 161420

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                         
Query: 556   gaggcggagcgctgccccatagccaagggtcgccgttctctgggacgggcgcgtttattc 615
             ||||||||| |||| |||| |||||  |||| || || ||||| | |||  | |||||||
Sbjct: 62270 gaggcggagtgctgtcccagagccagcggtcaccattttctggaatggggccatttattc 62211

                              
Query: 616   cagggaactccaccgtc 632
             ||||||| |||||||||
Sbjct: 62210 cagggaattccaccgtc 62194
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>gb|AE003451.5| Drosophila melanogaster chromosome X, section 35 of 74 of the complete
              sequence
          Length = 285729

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Minus

                                               
Query: 533    cgaggaggaggactgaagaggaggaggcggagc 565
              ||||||||||||| ||||||||||||| |||||
Sbjct: 131252 cgaggaggaggac-gaagaggaggaggaggagc 131221
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>emb|CT571274.6| Mouse DNA sequence from clone RP24-142M17 on chromosome 14, complete
             sequence
          Length = 178159

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 534   gaggaggaggactgaagaggaggag 558
             ||||||||||| |||||||||||||
Sbjct: 99002 gaggaggaggaatgaagaggaggag 99026
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>dbj|AB090164.1| Sus scrofa mRNA for receptor activity-modifying protein 2, complete
           cds
          Length = 750

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 551 aggaggaggcggagcgctgcc 571
           |||||||||||||||||||||
Sbjct: 109 aggaggaggcggagcgctgcc 89
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>gb|AY609864.1| Sus scrofa clone Clu_36690.scr.msk.p1.Contig2, mRNA sequence
          Length = 677

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 551 aggaggaggcggagcgctgcc 571
           |||||||||||||||||||||
Sbjct: 31  aggaggaggcggagcgctgcc 11
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>emb|AL611984.15| Mouse DNA sequence from clone RP23-416J8 on chromosome 4, complete
              sequence
          Length = 209904

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 534    gaggaggaggactgaagaggaggag 558
              |||||||||||||| ||||||||||
Sbjct: 132345 gaggaggaggactggagaggaggag 132369
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>gb|DQ470474.1| Homo sapiens scaffold attachment factor A2 mRNA, complete cds
          Length = 3015

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                           
Query: 533 cgaggaggaggactgaagaggaggaggcggag 564
           ||||||||||||| ||||||||||||| ||||
Sbjct: 415 cgaggaggaggac-gaagaggaggaggaggag 445
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>ref|XM_988398.1| PREDICTED: Mus musculus hypothetical protein LOC671668 (LOC671668),
           mRNA
          Length = 1614

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 401 tcttccggcgccgggggtcg 420
           ||||||||||||||||||||
Sbjct: 232 tcttccggcgccgggggtcg 213
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>ref|XM_977766.1| PREDICTED: Mus musculus hypothetical protein LOC674875 (LOC674875),
           mRNA
          Length = 1614

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 401 tcttccggcgccgggggtcg 420
           ||||||||||||||||||||
Sbjct: 232 tcttccggcgccgggggtcg 213
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>ref|XM_286373.5| PREDICTED: Mus musculus RIKEN cDNA 1810010H24 gene (1810010H24Rik),
           mRNA
          Length = 1593

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 401 tcttccggcgccgggggtcg 420
           ||||||||||||||||||||
Sbjct: 211 tcttccggcgccgggggtcg 192
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>gb|AF477624.1| Lilium longiflorum desiccation-associated protein mRNA, complete
           cds
          Length = 1191

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 472 ccggagggggaggagggcct 491
           ||||||||||||||||||||
Sbjct: 765 ccggagggggaggagggcct 784
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>ref|XM_814751.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053504147.240) partial mRNA
          Length = 3552

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                            
Query: 533  cgaggaggaggactgaagaggaggaggcggag 564
            ||||||||||||| ||||||||||||| ||||
Sbjct: 3378 cgaggaggaggac-gaagaggaggaggaggag 3408
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>emb|Z98755.1|HS76C18 Human DNA sequence from clone RP1-76C18 on chromosome 6q16.1-21
             Contains a ClpX caseinolytic protease X homolog (E. coli)
             (CLPX) pseudogene, complete sequence
          Length = 149698

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 136   atattgcaagtgctgacttatatg 159
             |||||||| |||||||||||||||
Sbjct: 96687 atattgcatgtgctgacttatatg 96664
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>emb|AL662924.24| Human DNA sequence from clone RP11-108J9 on chromosome 1 Contains the
             3' end of the CLIC4 gene for chloride intracellular
             channel 4 and three CpG islands, complete sequence
          Length = 82931

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/31 (93%), Gaps = 2/31 (6%)
 Strand = Plus / Minus

                                            
Query: 534   gaggaggaggactgaagaggaggaggcggag 564
             |||||||||||  ||||||||||||||||||
Sbjct: 65530 gaggaggagga--gaagaggaggaggcggag 65502
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>gb|BC029105.1| Homo sapiens heterogeneous nuclear ribonucleoprotein U-like 2, mRNA
           (cDNA clone IMAGE:4384978), containing frame-shift
           errors
          Length = 1750

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                           
Query: 533 cgaggaggaggactgaagaggaggaggcggag 564
           ||||||||||||| ||||||||||||| ||||
Sbjct: 538 cgaggaggaggac-gaagaggaggaggaggag 568
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>gb|BT010301.1| Drosophila melanogaster LD09626 full insert cDNA
          Length = 3973

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 548  aagaggaggaggcggagcgc 567
            ||||||||||||||||||||
Sbjct: 1793 aagaggaggaggcggagcgc 1812
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>emb|AL133382.8| Human DNA sequence from clone RP5-1156J9 on chromosome 1p12-13.2
            Contains part of the gene for a novel protein (FLJ37099)
            and a novel gene, complete sequence
          Length = 81419

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 234  ctcctgttgctgctgtagta 253
            ||||||||||||||||||||
Sbjct: 1872 ctcctgttgctgctgtagta 1853
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>gb|AC095904.7| Rattus norvegicus 9 BAC CH230-10L20 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 212732

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 540   gaggactgaagaggaggagg 559
             ||||||||||||||||||||
Sbjct: 20053 gaggactgaagaggaggagg 20072
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 552     ggaggaggcggagcgctgcc 571
               ||||||||||||||||||||
Sbjct: 1158419 ggaggaggcggagcgctgcc 1158400
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>gb|AC084116.7| Homo sapiens chromosome 8, clone RP11-103H7, complete sequence
          Length = 185339

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   cttacacaagtttcaacagc 130
             ||||||||||||||||||||
Sbjct: 81258 cttacacaagtttcaacagc 81277
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>gb|AC163014.5| Mus musculus chromosome 8, clone RP23-216D14, complete sequence
          Length = 208407

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    agtgtttcaaaataacatct 109
             ||||||||||||||||||||
Sbjct: 57682 agtgtttcaaaataacatct 57663
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>emb|AJ585522.1| Cucumber mosaic virus 3a gene for movement protein and cp gene for
            coat protein, genomic RNA, strain Twa
          Length = 2184

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 547  gaagaggaggaggcggagcg 566
            ||||||||||||||||||||
Sbjct: 1309 gaagaggaggaggcggagcg 1290
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>emb|AJ585518.1| Cucumber mosaic virus 3a gene for movement protein and cp gene for
            coat protein, genomic RNA, strain 237
          Length = 2193

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 547  gaagaggaggaggcggagcg 566
            ||||||||||||||||||||
Sbjct: 1318 gaagaggaggaggcggagcg 1299
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>emb|CR749576.1| Homo sapiens mRNA; cDNA DKFZp686N1631 (from clone DKFZp686N1631)
          Length = 5163

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 234  ctcctgttgctgctgtagta 253
            ||||||||||||||||||||
Sbjct: 3559 ctcctgttgctgctgtagta 3578
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>gb|AC093958.2| Drosophila melanogaster 3L BAC RP98-48M7 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 174373

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 548   aagaggaggaggcggagcgc 567
             ||||||||||||||||||||
Sbjct: 32308 aagaggaggaggcggagcgc 32289
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>dbj|AK124287.1| Homo sapiens cDNA FLJ42293 fis, clone TLIVE2007919, moderately
           similar to Human p70 (ST5) mRNA, alternatively spliced
          Length = 2214

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 234 ctcctgttgctgctgtagta 253
           ||||||||||||||||||||
Sbjct: 540 ctcctgttgctgctgtagta 559
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>dbj|AK122942.1| Homo sapiens cDNA FLJ16651 fis, clone TESTI4036449, highly  similar
           to Mus musculus G protein gamma 3 linked gene
          Length = 4001

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                           
Query: 533 cgaggaggaggactgaagaggaggaggcggag 564
           ||||||||||||| ||||||||||||| ||||
Sbjct: 450 cgaggaggaggac-gaagaggaggaggaggag 480
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>ref|NM_168064.2| Drosophila melanogaster CG14998-RA, transcript variant A (CG14998),
            mRNA
          Length = 3995

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 548  aagaggaggaggcggagcgc 567
            ||||||||||||||||||||
Sbjct: 1835 aagaggaggaggcggagcgc 1854
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>ref|NM_168063.2| Drosophila melanogaster CG14998-RD, transcript variant D (CG14998),
            mRNA
          Length = 4283

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 548  aagaggaggaggcggagcgc 567
            ||||||||||||||||||||
Sbjct: 2123 aagaggaggaggcggagcgc 2142
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>ref|NM_168062.2| Drosophila melanogaster CG14998-RE, transcript variant E (CG14998),
            mRNA
          Length = 4028

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 548  aagaggaggaggcggagcgc 567
            ||||||||||||||||||||
Sbjct: 1868 aagaggaggaggcggagcgc 1887
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>ref|NM_168061.2| Drosophila melanogaster CG14998-RB, transcript variant B (CG14998),
            mRNA
          Length = 3887

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 548  aagaggaggaggcggagcgc 567
            ||||||||||||||||||||
Sbjct: 1727 aagaggaggaggcggagcgc 1746
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>ref|NM_139604.2| Drosophila melanogaster CG14998-RC, transcript variant C (CG14998),
            mRNA
          Length = 3833

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 548  aagaggaggaggcggagcgc 567
            ||||||||||||||||||||
Sbjct: 1673 aagaggaggaggcggagcgc 1692
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>gb|AC093840.4| Homo sapiens BAC clone RP11-433O3 from 4, complete sequence
          Length = 173814

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 158    tgatattctgagcaaatttg 177
              ||||||||||||||||||||
Sbjct: 115005 tgatattctgagcaaatttg 115024
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>ref|NM_198459.2| Homo sapiens DENN/MADD domain containing 2C (DENND2C), mRNA
          Length = 4745

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 234  ctcctgttgctgctgtagta 253
            ||||||||||||||||||||
Sbjct: 3096 ctcctgttgctgctgtagta 3115
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>ref|XM_938301.1| PREDICTED: Homo sapiens heterogeneous nuclear ribonucleoprotein
           U-like 2 (HNRPUL2), mRNA
          Length = 5383

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                           
Query: 533 cgaggaggaggactgaagaggaggaggcggag 564
           ||||||||||||| ||||||||||||| ||||
Sbjct: 693 cgaggaggaggac-gaagaggaggaggaggag 723
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>ref|XM_495877.2| PREDICTED: Homo sapiens heterogeneous nuclear ribonucleoprotein
           U-like 2 (HNRPUL2), mRNA
          Length = 5237

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                           
Query: 533 cgaggaggaggactgaagaggaggaggcggag 564
           ||||||||||||| ||||||||||||| ||||
Sbjct: 547 cgaggaggaggac-gaagaggaggaggaggag 577
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>gb|AY817054.1| Haliaeetus albicilla clone Hal 15 microsatellite sequences
          Length = 639

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 534 gaggaggaggactgaagaggagga 557
           ||||||||||||||| ||||||||
Sbjct: 329 gaggaggaggactgaggaggagga 352
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>gb|AY974337.1| Cucumber mosaic virus coat protein mRNA, complete cds
          Length = 657

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 547 gaagaggaggaggcggagcg 566
           ||||||||||||||||||||
Sbjct: 83  gaagaggaggaggcggagcg 64
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>gb|AC087217.1|AC087217 Mus musculus chromosome 17 clone GS-384N12, complete sequence
          Length = 77366

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 540   gaggactgaagaggaggagg 559
             ||||||||||||||||||||
Sbjct: 53221 gaggactgaagaggaggagg 53202



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 540   gaggactgaagaggaggagg 559
             ||||||||||||||||||||
Sbjct: 27292 gaggactgaagaggaggagg 27273
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>gb|AF523342.1| Cucumber mosaic virus isolate C18 coat protein gene, complete cds
          Length = 657

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 547 gaagaggaggaggcggagcg 566
           ||||||||||||||||||||
Sbjct: 83  gaagaggaggaggcggagcg 64
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>gb|AC092576.3| Homo sapiens BAC clone RP11-7N16 from 2, complete sequence
          Length = 152747

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 536    ggaggaggactgaagaggaggagg 559
              |||||||||| |||||||||||||
Sbjct: 117891 ggaggaggacagaagaggaggagg 117868



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 536    ggaggaggactgaagaggaggagg 559
              |||||||||| |||||||||||||
Sbjct: 117687 ggaggaggacagaagaggaggagg 117664
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>dbj|AP003543.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0592B08
          Length = 131096

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                              
Query: 533    cgaggaggaggactgaagaggaggaggcggag 564
              ||||||||||||| ||||||||||||| ||||
Sbjct: 106384 cgaggaggaggac-gaagaggaggaggaggag 106354
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>emb|BX647950.1|HSM808096 Homo sapiens mRNA; cDNA DKFZp686G0351 (from clone DKFZp686G0351)
          Length = 4745

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 234  ctcctgttgctgctgtagta 253
            ||||||||||||||||||||
Sbjct: 3096 ctcctgttgctgctgtagta 3115
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>dbj|AK121569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035E02, full
           insert sequence
          Length = 1413

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 539 ggaggactgaagaggaggaggcgg 562
           |||||||||| |||||||||||||
Sbjct: 80  ggaggactgaggaggaggaggcgg 103
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>dbj|AK109927.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-G11, full
           insert sequence
          Length = 2372

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 236 cctgttgctgctgtagtagtgcct 259
           |||| |||||||||||||||||||
Sbjct: 392 cctgctgctgctgtagtagtgcct 369
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>dbj|AK107048.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-C11, full
            insert sequence
          Length = 2009

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                            
Query: 533  cgaggaggaggactgaagaggaggaggcggag 564
            ||||||||||||| ||||||||||||| ||||
Sbjct: 1397 cgaggaggaggac-gaagaggaggaggaggag 1427
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>gb|AC107835.8| Mus musculus chromosome 8, clone RP23-267M21, complete sequence
          Length = 179297

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    agtgtttcaaaataacatct 109
             ||||||||||||||||||||
Sbjct: 21497 agtgtttcaaaataacatct 21516
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>gb|AE003480.4| Drosophila melanogaster chromosome 3L, section 14 of 83 of the complete
              sequence
          Length = 311933

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 548    aagaggaggaggcggagcgc 567
              ||||||||||||||||||||
Sbjct: 130106 aagaggaggaggcggagcgc 130087
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>dbj|AP001458.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-831H9, complete
              sequence
          Length = 177433

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                              
Query: 533    cgaggaggaggactgaagaggaggaggcggag 564
              ||||||||||||| ||||||||||||| ||||
Sbjct: 134202 cgaggaggaggac-gaagaggaggaggaggag 134172
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>dbj|AP003174.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-136I14, complete
             sequence
          Length = 170156

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 474   ggagggggaggagggcctct 493
             ||||||||||||||||||||
Sbjct: 40588 ggagggggaggagggcctct 40569
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>gb|AC164567.5| Mus musculus BAC clone RP23-64B8 from chromosome 10, complete sequence
          Length = 262262

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 540    gaggactgaagaggaggagg 559
              ||||||||||||||||||||
Sbjct: 153787 gaggactgaagaggaggagg 153768
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>emb|CR974466.14| Mouse DNA sequence from clone RP23-331E12 on chromosome 17, complete
             sequence
          Length = 210806

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 540   gaggactgaagaggaggagg 559
             ||||||||||||||||||||
Sbjct: 58182 gaggactgaagaggaggagg 58163



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 540   gaggactgaagaggaggagg 559
             ||||||||||||||||||||
Sbjct: 32185 gaggactgaagaggaggagg 32166
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>emb|AL596116.14| Mouse DNA sequence from clone RP23-317F9 on chromosome 11, complete
            sequence
          Length = 217735

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 401  tcttccggcgccgggggtcg 420
            ||||||||||||||||||||
Sbjct: 7094 tcttccggcgccgggggtcg 7075
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>dbj|AP001160.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-727F15, complete
            sequences
          Length = 184802

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                            
Query: 533  cgaggaggaggactgaagaggaggaggcggag 564
            ||||||||||||| ||||||||||||| ||||
Sbjct: 4236 cgaggaggaggac-gaagaggaggaggaggag 4206


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,778,311
Number of Sequences: 3902068
Number of extensions: 5778311
Number of successful extensions: 132035
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 131796
Number of HSP's gapped (non-prelim): 299
length of query: 649
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 626
effective length of database: 17,143,297,704
effective search space: 10731704362704
effective search space used: 10731704362704
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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