Clone Name | rbasd21f13 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_479660.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1046 Score = 143 bits (72), Expect = 6e-31 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Minus Query: 174 tcagacgtcgacaacgcacggcgcggcgcgctggaagttgaagtagccgttcccgccgcc 233 |||||||||||| ||||| | ||||| |||||||| ||||||||||||| |||||| Sbjct: 787 tcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgtt---gccgcc 731 Query: 234 gccggcgatggagccgtagctgccctgccctccgttgacggtgagcagagcggggcacct 293 ||||| | ||||||||||||| ||| | || |||||||| ||||||| ||||||||||| Sbjct: 730 gccggagttggagccgtagcttccccggccgtcgttgacgatgagcagggcggggcacct 671 Query: 294 gacccggaggtggtagtgccccgtgatgaacgccccggccttccacctgatccagccgtc 353 ||| |||||||||||||| || |||||||| || |||||||| | | |||||||||||| Sbjct: 670 gacgcggaggtggtagtgtccggtgatgaaggcgccggccttgtagcggatccagccgtc 611 Query: 354 cacccgcaccgtgagcagcacgtagccggccgtctcgtcctg 395 || || | |||| |||| ||||||||| ||||||||||| Sbjct: 610 gacgcggatggtgacgagcaggtagccggcggtctcgtcctg 569
>ref|XM_507421.1| PREDICTED Oryza sativa (japonica cultivar-group), P0015C07.18 mRNA Length = 1218 Score = 143 bits (72), Expect = 6e-31 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Minus Query: 174 tcagacgtcgacaacgcacggcgcggcgcgctggaagttgaagtagccgttcccgccgcc 233 |||||||||||| ||||| | ||||| |||||||| ||||||||||||| |||||| Sbjct: 783 tcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgtt---gccgcc 727 Query: 234 gccggcgatggagccgtagctgccctgccctccgttgacggtgagcagagcggggcacct 293 ||||| | ||||||||||||| ||| | || |||||||| ||||||| ||||||||||| Sbjct: 726 gccggagttggagccgtagcttccccggccgtcgttgacgatgagcagggcggggcacct 667 Query: 294 gacccggaggtggtagtgccccgtgatgaacgccccggccttccacctgatccagccgtc 353 ||| |||||||||||||| || |||||||| || |||||||| | | |||||||||||| Sbjct: 666 gacgcggaggtggtagtgtccggtgatgaaggcgccggccttgtagcggatccagccgtc 607 Query: 354 cacccgcaccgtgagcagcacgtagccggccgtctcgtcctg 395 || || | |||| |||| ||||||||| ||||||||||| Sbjct: 606 gacgcggatggtgacgagcaggtagccggcggtctcgtcctg 565
>ref|XM_507420.1| PREDICTED Oryza sativa (japonica cultivar-group), P0015C07.18 mRNA Length = 1386 Score = 143 bits (72), Expect = 6e-31 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Minus Query: 174 tcagacgtcgacaacgcacggcgcggcgcgctggaagttgaagtagccgttcccgccgcc 233 |||||||||||| ||||| | ||||| |||||||| ||||||||||||| |||||| Sbjct: 951 tcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgtt---gccgcc 895 Query: 234 gccggcgatggagccgtagctgccctgccctccgttgacggtgagcagagcggggcacct 293 ||||| | ||||||||||||| ||| | || |||||||| ||||||| ||||||||||| Sbjct: 894 gccggagttggagccgtagcttccccggccgtcgttgacgatgagcagggcggggcacct 835 Query: 294 gacccggaggtggtagtgccccgtgatgaacgccccggccttccacctgatccagccgtc 353 ||| |||||||||||||| || |||||||| || |||||||| | | |||||||||||| Sbjct: 834 gacgcggaggtggtagtgtccggtgatgaaggcgccggccttgtagcggatccagccgtc 775 Query: 354 cacccgcaccgtgagcagcacgtagccggccgtctcgtcctg 395 || || | |||| |||| ||||||||| ||||||||||| Sbjct: 774 gacgcggatggtgacgagcaggtagccggcggtctcgtcctg 733
>ref|XM_507419.1| PREDICTED Oryza sativa (japonica cultivar-group), P0015C07.18 mRNA Length = 1520 Score = 143 bits (72), Expect = 6e-31 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Minus Query: 174 tcagacgtcgacaacgcacggcgcggcgcgctggaagttgaagtagccgttcccgccgcc 233 |||||||||||| ||||| | ||||| |||||||| ||||||||||||| |||||| Sbjct: 1029 tcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgtt---gccgcc 973 Query: 234 gccggcgatggagccgtagctgccctgccctccgttgacggtgagcagagcggggcacct 293 ||||| | ||||||||||||| ||| | || |||||||| ||||||| ||||||||||| Sbjct: 972 gccggagttggagccgtagcttccccggccgtcgttgacgatgagcagggcggggcacct 913 Query: 294 gacccggaggtggtagtgccccgtgatgaacgccccggccttccacctgatccagccgtc 353 ||| |||||||||||||| || |||||||| || |||||||| | | |||||||||||| Sbjct: 912 gacgcggaggtggtagtgtccggtgatgaaggcgccggccttgtagcggatccagccgtc 853 Query: 354 cacccgcaccgtgagcagcacgtagccggccgtctcgtcctg 395 || || | |||| |||| ||||||||| ||||||||||| Sbjct: 852 gacgcggatggtgacgagcaggtagccggcggtctcgtcctg 811
>ref|XM_507418.1| PREDICTED Oryza sativa (japonica cultivar-group), P0015C07.18 mRNA Length = 1211 Score = 143 bits (72), Expect = 6e-31 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Minus Query: 174 tcagacgtcgacaacgcacggcgcggcgcgctggaagttgaagtagccgttcccgccgcc 233 |||||||||||| ||||| | ||||| |||||||| ||||||||||||| |||||| Sbjct: 694 tcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgtt---gccgcc 638 Query: 234 gccggcgatggagccgtagctgccctgccctccgttgacggtgagcagagcggggcacct 293 ||||| | ||||||||||||| ||| | || |||||||| ||||||| ||||||||||| Sbjct: 637 gccggagttggagccgtagcttccccggccgtcgttgacgatgagcagggcggggcacct 578 Query: 294 gacccggaggtggtagtgccccgtgatgaacgccccggccttccacctgatccagccgtc 353 ||| |||||||||||||| || |||||||| || |||||||| | | |||||||||||| Sbjct: 577 gacgcggaggtggtagtgtccggtgatgaaggcgccggccttgtagcggatccagccgtc 518 Query: 354 cacccgcaccgtgagcagcacgtagccggccgtctcgtcctg 395 || || | |||| |||| ||||||||| ||||||||||| Sbjct: 517 gacgcggatggtgacgagcaggtagccggcggtctcgtcctg 476
>ref|XM_507417.1| PREDICTED Oryza sativa (japonica cultivar-group), P0015C07.18 mRNA Length = 1323 Score = 143 bits (72), Expect = 6e-31 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Minus Query: 174 tcagacgtcgacaacgcacggcgcggcgcgctggaagttgaagtagccgttcccgccgcc 233 |||||||||||| ||||| | ||||| |||||||| ||||||||||||| |||||| Sbjct: 806 tcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgtt---gccgcc 750 Query: 234 gccggcgatggagccgtagctgccctgccctccgttgacggtgagcagagcggggcacct 293 ||||| | ||||||||||||| ||| | || |||||||| ||||||| ||||||||||| Sbjct: 749 gccggagttggagccgtagcttccccggccgtcgttgacgatgagcagggcggggcacct 690 Query: 294 gacccggaggtggtagtgccccgtgatgaacgccccggccttccacctgatccagccgtc 353 ||| |||||||||||||| || |||||||| || |||||||| | | |||||||||||| Sbjct: 689 gacgcggaggtggtagtgtccggtgatgaaggcgccggccttgtagcggatccagccgtc 630 Query: 354 cacccgcaccgtgagcagcacgtagccggccgtctcgtcctg 395 || || | |||| |||| ||||||||| ||||||||||| Sbjct: 629 gacgcggatggtgacgagcaggtagccggcggtctcgtcctg 588
>ref|XM_506616.2| PREDICTED Oryza sativa (japonica cultivar-group), P0015C07.18 mRNA Length = 1445 Score = 143 bits (72), Expect = 6e-31 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Minus Query: 174 tcagacgtcgacaacgcacggcgcggcgcgctggaagttgaagtagccgttcccgccgcc 233 |||||||||||| ||||| | ||||| |||||||| ||||||||||||| |||||| Sbjct: 928 tcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgtt---gccgcc 872 Query: 234 gccggcgatggagccgtagctgccctgccctccgttgacggtgagcagagcggggcacct 293 ||||| | ||||||||||||| ||| | || |||||||| ||||||| ||||||||||| Sbjct: 871 gccggagttggagccgtagcttccccggccgtcgttgacgatgagcagggcggggcacct 812 Query: 294 gacccggaggtggtagtgccccgtgatgaacgccccggccttccacctgatccagccgtc 353 ||| |||||||||||||| || |||||||| || |||||||| | | |||||||||||| Sbjct: 811 gacgcggaggtggtagtgtccggtgatgaaggcgccggccttgtagcggatccagccgtc 752 Query: 354 cacccgcaccgtgagcagcacgtagccggccgtctcgtcctg 395 || || | |||| |||| ||||||||| ||||||||||| Sbjct: 751 gacgcggatggtgacgagcaggtagccggcggtctcgtcctg 710
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 143 bits (72), Expect = 6e-31 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 174 tcagacgtcgacaacgcacggcgcggcgcgctggaagttgaagtagccgttcccgccgcc 233 |||||||||||| ||||| | ||||| |||||||| ||||||||||||| |||||| Sbjct: 146078 tcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgtt---gccgcc 146134 Query: 234 gccggcgatggagccgtagctgccctgccctccgttgacggtgagcagagcggggcacct 293 ||||| | ||||||||||||| ||| | || |||||||| ||||||| ||||||||||| Sbjct: 146135 gccggagttggagccgtagcttccccggccgtcgttgacgatgagcagggcggggcacct 146194 Query: 294 gacccggaggtggtagtgccccgtgatgaacgccccggccttccacctgatccagccgtc 353 ||| |||||||||||||| || |||||||| || |||||||| | | |||||||||||| Sbjct: 146195 gacgcggaggtggtagtgtccggtgatgaaggcgccggccttgtagcggatccagccgtc 146254 Query: 354 cacccgcaccgtgagcagcacgtagccggccgtctcgtcctg 395 || || | |||| |||| ||||||||| ||||||||||| Sbjct: 146255 gacgcggatggtgacgagcaggtagccggcggtctcgtcctg 146296
>dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0015C07 Length = 149079 Score = 143 bits (72), Expect = 6e-31 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 174 tcagacgtcgacaacgcacggcgcggcgcgctggaagttgaagtagccgttcccgccgcc 233 |||||||||||| ||||| | ||||| |||||||| ||||||||||||| |||||| Sbjct: 61413 tcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgtt---gccgcc 61469 Query: 234 gccggcgatggagccgtagctgccctgccctccgttgacggtgagcagagcggggcacct 293 ||||| | ||||||||||||| ||| | || |||||||| ||||||| ||||||||||| Sbjct: 61470 gccggagttggagccgtagcttccccggccgtcgttgacgatgagcagggcggggcacct 61529 Query: 294 gacccggaggtggtagtgccccgtgatgaacgccccggccttccacctgatccagccgtc 353 ||| |||||||||||||| || |||||||| || |||||||| | | |||||||||||| Sbjct: 61530 gacgcggaggtggtagtgtccggtgatgaaggcgccggccttgtagcggatccagccgtc 61589 Query: 354 cacccgcaccgtgagcagcacgtagccggccgtctcgtcctg 395 || || | |||| |||| ||||||||| ||||||||||| Sbjct: 61590 gacgcggatggtgacgagcaggtagccggcggtctcgtcctg 61631
>dbj|AK104488.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-B05, full insert sequence Length = 1219 Score = 143 bits (72), Expect = 6e-31 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Minus Query: 174 tcagacgtcgacaacgcacggcgcggcgcgctggaagttgaagtagccgttcccgccgcc 233 |||||||||||| ||||| | ||||| |||||||| ||||||||||||| |||||| Sbjct: 783 tcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgtt---gccgcc 727 Query: 234 gccggcgatggagccgtagctgccctgccctccgttgacggtgagcagagcggggcacct 293 ||||| | ||||||||||||| ||| | || |||||||| ||||||| ||||||||||| Sbjct: 726 gccggagttggagccgtagcttccccggccgtcgttgacgatgagcagggcggggcacct 667 Query: 294 gacccggaggtggtagtgccccgtgatgaacgccccggccttccacctgatccagccgtc 353 ||| |||||||||||||| || |||||||| || |||||||| | | |||||||||||| Sbjct: 666 gacgcggaggtggtagtgtccggtgatgaaggcgccggccttgtagcggatccagccgtc 607 Query: 354 cacccgcaccgtgagcagcacgtagccggccgtctcgtcctg 395 || || | |||| |||| ||||||||| ||||||||||| Sbjct: 606 gacgcggatggtgacgagcaggtagccggcggtctcgtcctg 565
>dbj|AK099239.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116B02, full insert sequence Length = 1386 Score = 143 bits (72), Expect = 6e-31 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Minus Query: 174 tcagacgtcgacaacgcacggcgcggcgcgctggaagttgaagtagccgttcccgccgcc 233 |||||||||||| ||||| | ||||| |||||||| ||||||||||||| |||||| Sbjct: 951 tcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgtt---gccgcc 895 Query: 234 gccggcgatggagccgtagctgccctgccctccgttgacggtgagcagagcggggcacct 293 ||||| | ||||||||||||| ||| | || |||||||| ||||||| ||||||||||| Sbjct: 894 gccggagttggagccgtagcttccccggccgtcgttgacgatgagcagggcggggcacct 835 Query: 294 gacccggaggtggtagtgccccgtgatgaacgccccggccttccacctgatccagccgtc 353 ||| |||||||||||||| || |||||||| || |||||||| | | |||||||||||| Sbjct: 834 gacgcggaggtggtagtgtccggtgatgaaggcgccggccttgtagcggatccagccgtc 775 Query: 354 cacccgcaccgtgagcagcacgtagccggccgtctcgtcctg 395 || || | |||| |||| ||||||||| ||||||||||| Sbjct: 774 gacgcggatggtgacgagcaggtagccggcggtctcgtcctg 733
>dbj|AK072003.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097H23, full insert sequence Length = 1445 Score = 143 bits (72), Expect = 6e-31 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Minus Query: 174 tcagacgtcgacaacgcacggcgcggcgcgctggaagttgaagtagccgttcccgccgcc 233 |||||||||||| ||||| | ||||| |||||||| ||||||||||||| |||||| Sbjct: 928 tcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgtt---gccgcc 872 Query: 234 gccggcgatggagccgtagctgccctgccctccgttgacggtgagcagagcggggcacct 293 ||||| | ||||||||||||| ||| | || |||||||| ||||||| ||||||||||| Sbjct: 871 gccggagttggagccgtagcttccccggccgtcgttgacgatgagcagggcggggcacct 812 Query: 294 gacccggaggtggtagtgccccgtgatgaacgccccggccttccacctgatccagccgtc 353 ||| |||||||||||||| || |||||||| || |||||||| | | |||||||||||| Sbjct: 811 gacgcggaggtggtagtgtccggtgatgaaggcgccggccttgtagcggatccagccgtc 752 Query: 354 cacccgcaccgtgagcagcacgtagccggccgtctcgtcctg 395 || || | |||| |||| ||||||||| ||||||||||| Sbjct: 751 gacgcggatggtgacgagcaggtagccggcggtctcgtcctg 710
>dbj|AK067526.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109O20, full insert sequence Length = 1520 Score = 143 bits (72), Expect = 6e-31 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Minus Query: 174 tcagacgtcgacaacgcacggcgcggcgcgctggaagttgaagtagccgttcccgccgcc 233 |||||||||||| ||||| | ||||| |||||||| ||||||||||||| |||||| Sbjct: 1029 tcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgtt---gccgcc 973 Query: 234 gccggcgatggagccgtagctgccctgccctccgttgacggtgagcagagcggggcacct 293 ||||| | ||||||||||||| ||| | || |||||||| ||||||| ||||||||||| Sbjct: 972 gccggagttggagccgtagcttccccggccgtcgttgacgatgagcagggcggggcacct 913 Query: 294 gacccggaggtggtagtgccccgtgatgaacgccccggccttccacctgatccagccgtc 353 ||| |||||||||||||| || |||||||| || |||||||| | | |||||||||||| Sbjct: 912 gacgcggaggtggtagtgtccggtgatgaaggcgccggccttgtagcggatccagccgtc 853 Query: 354 cacccgcaccgtgagcagcacgtagccggccgtctcgtcctg 395 || || | |||| |||| ||||||||| ||||||||||| Sbjct: 852 gacgcggatggtgacgagcaggtagccggcggtctcgtcctg 811
>dbj|AK061780.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-D12, full insert sequence Length = 1323 Score = 143 bits (72), Expect = 6e-31 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Minus Query: 174 tcagacgtcgacaacgcacggcgcggcgcgctggaagttgaagtagccgttcccgccgcc 233 |||||||||||| ||||| | ||||| |||||||| ||||||||||||| |||||| Sbjct: 806 tcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgtt---gccgcc 750 Query: 234 gccggcgatggagccgtagctgccctgccctccgttgacggtgagcagagcggggcacct 293 ||||| | ||||||||||||| ||| | || |||||||| ||||||| ||||||||||| Sbjct: 749 gccggagttggagccgtagcttccccggccgtcgttgacgatgagcagggcggggcacct 690 Query: 294 gacccggaggtggtagtgccccgtgatgaacgccccggccttccacctgatccagccgtc 353 ||| |||||||||||||| || |||||||| || |||||||| | | |||||||||||| Sbjct: 689 gacgcggaggtggtagtgtccggtgatgaaggcgccggccttgtagcggatccagccgtc 630 Query: 354 cacccgcaccgtgagcagcacgtagccggccgtctcgtcctg 395 || || | |||| |||| ||||||||| ||||||||||| Sbjct: 629 gacgcggatggtgacgagcaggtagccggcggtctcgtcctg 588
>dbj|AK061546.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-A05, full insert sequence Length = 1211 Score = 143 bits (72), Expect = 6e-31 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Minus Query: 174 tcagacgtcgacaacgcacggcgcggcgcgctggaagttgaagtagccgttcccgccgcc 233 |||||||||||| ||||| | ||||| |||||||| ||||||||||||| |||||| Sbjct: 694 tcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgtt---gccgcc 638 Query: 234 gccggcgatggagccgtagctgccctgccctccgttgacggtgagcagagcggggcacct 293 ||||| | ||||||||||||| ||| | || |||||||| ||||||| ||||||||||| Sbjct: 637 gccggagttggagccgtagcttccccggccgtcgttgacgatgagcagggcggggcacct 578 Query: 294 gacccggaggtggtagtgccccgtgatgaacgccccggccttccacctgatccagccgtc 353 ||| |||||||||||||| || |||||||| || |||||||| | | |||||||||||| Sbjct: 577 gacgcggaggtggtagtgtccggtgatgaaggcgccggccttgtagcggatccagccgtc 518 Query: 354 cacccgcaccgtgagcagcacgtagccggccgtctcgtcctg 395 || || | |||| |||| ||||||||| ||||||||||| Sbjct: 517 gacgcggatggtgacgagcaggtagccggcggtctcgtcctg 476
>dbj|AK061430.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-H04, full insert sequence Length = 1046 Score = 143 bits (72), Expect = 6e-31 Identities = 185/222 (83%), Gaps = 3/222 (1%) Strand = Plus / Minus Query: 174 tcagacgtcgacaacgcacggcgcggcgcgctggaagttgaagtagccgttcccgccgcc 233 |||||||||||| ||||| | ||||| |||||||| ||||||||||||| |||||| Sbjct: 787 tcagacgtcgacgacgcaggcggcggctcgctggaacctgaagtagccgtt---gccgcc 731 Query: 234 gccggcgatggagccgtagctgccctgccctccgttgacggtgagcagagcggggcacct 293 ||||| | ||||||||||||| ||| | || |||||||| ||||||| ||||||||||| Sbjct: 730 gccggagttggagccgtagcttccccggccgtcgttgacgatgagcagggcggggcacct 671 Query: 294 gacccggaggtggtagtgccccgtgatgaacgccccggccttccacctgatccagccgtc 353 ||| |||||||||||||| || |||||||| || |||||||| | | |||||||||||| Sbjct: 670 gacgcggaggtggtagtgtccggtgatgaaggcgccggccttgtagcggatccagccgtc 611 Query: 354 cacccgcaccgtgagcagcacgtagccggccgtctcgtcctg 395 || || | |||| |||| ||||||||| ||||||||||| Sbjct: 610 gacgcggatggtgacgagcaggtagccggcggtctcgtcctg 569
>ref|XM_474420.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 663 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 246 gccgtagctgccctgccctccgttgacggtgagcagagcggggcacctgacccggaggtg 305 |||||||||||||| || ||||||||||||| || |||||||| |||| |||||||| Sbjct: 594 gccgtagctgcccttgccgtcgttgacggtgaggagggcggggcagttgacgcggaggtg 535 Query: 306 gtagtg 311 |||||| Sbjct: 534 gtagtg 529
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 246 gccgtagctgccctgccctccgttgacggtgagcagagcggggcacctgacccggaggtg 305 |||||||||||||| || ||||||||||||| || |||||||| |||| |||||||| Sbjct: 35046557 gccgtagctgcccttgccgtcgttgacggtgaggagggcggggcagttgacgcggaggtg 35046616 Query: 306 gtagtg 311 |||||| Sbjct: 35046617 gtagtg 35046622
>dbj|AK103610.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133J15, full insert sequence Length = 1420 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 246 gccgtagctgccctgccctccgttgacggtgagcagagcggggcacctgacccggaggtg 305 |||||||||||||| || ||||||||||||| || |||||||| |||| |||||||| Sbjct: 1007 gccgtagctgcccttgccgtcgttgacggtgaggagggcggggcagttgacgcggaggtg 948 Query: 306 gtagtg 311 |||||| Sbjct: 947 gtagtg 942
>dbj|AK069353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014D16, full insert sequence Length = 1024 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 246 gccgtagctgccctgccctccgttgacggtgagcagagcggggcacctgacccggaggtg 305 |||||||||||||| || ||||||||||||| || |||||||| |||| |||||||| Sbjct: 630 gccgtagctgcccttgccgtcgttgacggtgaggagggcggggcagttgacgcggaggtg 571 Query: 306 gtagtg 311 |||||| Sbjct: 570 gtagtg 565
>dbj|AK061257.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-B04, full insert sequence Length = 1027 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 246 gccgtagctgccctgccctccgttgacggtgagcagagcggggcacctgacccggaggtg 305 |||||||||||||| || ||||||||||||| || |||||||| |||| |||||||| Sbjct: 633 gccgtagctgcccttgccgtcgttgacggtgaggagggcggggcagttgacgcggaggtg 574 Query: 306 gtagtg 311 |||||| Sbjct: 573 gtagtg 568
>emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0723C07, complete sequence Length = 112897 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 246 gccgtagctgccctgccctccgttgacggtgagcagagcggggcacctgacccggaggtg 305 |||||||||||||| || ||||||||||||| || |||||||| |||| |||||||| Sbjct: 1225 gccgtagctgcccttgccgtcgttgacggtgaggagggcggggcagttgacgcggaggtg 1284 Query: 306 gtagtg 311 |||||| Sbjct: 1285 gtagtg 1290
>emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0913C04, complete sequence Length = 94152 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 246 gccgtagctgccctgccctccgttgacggtgagcagagcggggcacctgacccggaggtg 305 |||||||||||||| || ||||||||||||| || |||||||| |||| |||||||| Sbjct: 78225 gccgtagctgcccttgccgtcgttgacggtgaggagggcggggcagttgacgcggaggtg 78284 Query: 306 gtagtg 311 |||||| Sbjct: 78285 gtagtg 78290
>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09, complete sequence Length = 145391 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 246 gccgtagctgccctgccctccgttgacggtgagcagagcggggcacctgacccggaggtg 305 |||||||||||||| || ||||||||||||| || |||||||| |||| |||||||| Sbjct: 105604 gccgtagctgcccttgccgtcgttgacggtgaggagggcggggcagttgacgcggaggtg 105663 Query: 306 gtagtg 311 |||||| Sbjct: 105664 gtagtg 105669
>emb|AL356421.10| Human DNA sequence from clone RP11-550C4 on chromosome 6 Contains the 3' end of the CD2AP gene for CD2-associated protein, the GPR111 gene for G protein-coupled receptor 111, the GPR115 gene for G protein-coupled receptor 115, the 5' end of a gene for novel protein similar to seven transmembrane receptor (Rhodopsin family), a novel gene and a ribosomal protein 27A (RPL27A) pseudogene, complete sequence Length = 170532 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 139 cagaaccagaagggctctggatt 161 ||||||||||||||||||||||| Sbjct: 9239 cagaaccagaagggctctggatt 9261
>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16 Length = 348642 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 394 tgcgccagcgccaccgccaggt 415 |||||||||||||||||||||| Sbjct: 128706 tgcgccagcgccaccgccaggt 128727
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14 Length = 346301 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 394 tgcgccagcgccaccgccaggt 415 |||||||||||||||||||||| Sbjct: 201713 tgcgccagcgccaccgccaggt 201734
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 394 tgcgccagcgccaccgccaggt 415 |||||||||||||||||||||| Sbjct: 16309 tgcgccagcgccaccgccaggt 16330
>gb|AY118441.1| Drosophila melanogaster SD06668 full insert cDNA Length = 3162 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 228 gccgccgccggcgatggagccg 249 |||||||||||||||||||||| Sbjct: 231 gccgccgccggcgatggagccg 252
>ref|NM_206565.1| Drosophila melanogaster CG6695-RB, transcript variant B (CG6695), mRNA Length = 3127 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 228 gccgccgccggcgatggagccg 249 |||||||||||||||||||||| Sbjct: 291 gccgccgccggcgatggagccg 312
>ref|NM_143019.2| Drosophila melanogaster CG6695-RA, transcript variant A (CG6695), mRNA Length = 3168 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 228 gccgccgccggcgatggagccg 249 |||||||||||||||||||||| Sbjct: 291 gccgccgccggcgatggagccg 312
>gb|AC008237.4|AC008237 Drosophila melanogaster, chromosome 3R, region 96A-96A, BAC clone BACR47D16, complete sequence Length = 200216 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 228 gccgccgccggcgatggagccg 249 |||||||||||||||||||||| Sbjct: 187788 gccgccgccggcgatggagccg 187809
>gb|AC009916.5|AC009916 Drosophila melanogaster, chromosome 3R, region 96A-96A, BAC clone BACR35N03, complete sequence Length = 169271 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 228 gccgccgccggcgatggagccg 249 |||||||||||||||||||||| Sbjct: 87595 gccgccgccggcgatggagccg 87574
>gb|AE003748.3| Drosophila melanogaster chromosome 3R, section 86 of 118 of the complete sequence Length = 253272 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 228 gccgccgccggcgatggagccg 249 |||||||||||||||||||||| Sbjct: 198483 gccgccgccggcgatggagccg 198504
>gb|AC117721.8| Mus musculus chromosome 1, clone RP24-196D2, complete sequence Length = 170426 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 326 ccccggccttccacctgatccagcc 350 ||||||||||||| ||||||||||| Sbjct: 111921 ccccggccttccaactgatccagcc 111897
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 tctcgtcctgcgccagcgcca 406 ||||||||||||||||||||| Sbjct: 4243557 tctcgtcctgcgccagcgcca 4243577
>emb|AL138710.16| Human DNA sequence from clone RP11-469A21 on chromosome 13, complete sequence Length = 66281 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 aaatatatttcttggattatt 26 ||||||||||||||||||||| Sbjct: 58819 aaatatatttcttggattatt 58799
>gb|AC158960.4| Mus musculus chromosome 1, clone RP23-315O2, complete sequence Length = 176947 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 326 ccccggccttccacctgatccagcc 350 ||||||||||||| ||||||||||| Sbjct: 119663 ccccggccttccaactgatccagcc 119687
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 tctcgtcctgcgccagcgcca 406 ||||||||||||||||||||| Sbjct: 826067 tctcgtcctgcgccagcgcca 826047
>gb|AC139053.15| Mus musculus chromosome 1, clone RP23-2I19, complete sequence Length = 232850 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 326 ccccggccttccacctgatccagcc 350 ||||||||||||| ||||||||||| Sbjct: 5567 ccccggccttccaactgatccagcc 5591
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 ccgccgccggcgatggagccg 249 ||||||||||||||||||||| Sbjct: 2356956 ccgccgccggcgatggagccg 2356976
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 ccgccgccgccggcgatggag 246 ||||||||||||||||||||| Sbjct: 14350005 ccgccgccgccggcgatggag 14350025 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ccgttcccgccgccgccggc 239 |||||||||||||||||||| Sbjct: 16302687 ccgttcccgccgccgccggc 16302668
>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0465E03 Length = 151206 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 ccgccgccgccggcgatggag 246 ||||||||||||||||||||| Sbjct: 41808 ccgccgccgccggcgatggag 41828
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 tctcgtcctgcgccagcgcca 406 ||||||||||||||||||||| Sbjct: 857763 tctcgtcctgcgccagcgcca 857743
>emb|AL731871.12| Mouse DNA sequence from clone RP23-111J19 on chromosome 2, complete sequence Length = 195003 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 16 cttggattatttcatcaaagaagga 40 |||||||||||| |||||||||||| Sbjct: 19470 cttggattattttatcaaagaagga 19494
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 ccgttcccgccgccgccggc 239 |||||||||||||||||||| Sbjct: 2248707 ccgttcccgccgccgccggc 2248726 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 tgcgccagcgccaccgccag 413 |||||||||||||||||||| Sbjct: 632639 tgcgccagcgccaccgccag 632620
>ref|XM_468469.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4017 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 cgccgccggcgatggagccg 249 |||||||||||||||||||| Sbjct: 68 cgccgccggcgatggagccg 87
>ref|NM_195255.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0009C07.5), mRNA Length = 801 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 ccgccgccgccggcgatggagccg 249 ||||| |||||||||||||||||| Sbjct: 10 ccgccaccgccggcgatggagccg 33
>gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0426G01, complete sequence Length = 173074 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cgccgccgccggcgatggag 246 |||||||||||||||||||| Sbjct: 67047 cgccgccgccggcgatggag 67028
>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete sequence Length = 1194300 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 304 tggtagtgccccgtgatgaacgcc 327 |||||||||||||| ||||||||| Sbjct: 582834 tggtagtgccccgtaatgaacgcc 582857
>gb|AC105744.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0009C07, complete sequence Length = 124266 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 226 ccgccgccgccggcgatggagccg 249 ||||| |||||||||||||||||| Sbjct: 19459 ccgccaccgccggcgatggagccg 19436
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 gcagcacgtagccggccgtc 387 |||||||||||||||||||| Sbjct: 3335686 gcagcacgtagccggccgtc 3335705
>ref|XM_366298.1| Magnaporthe grisea 70-15 predicted protein (MG10517.4) partial mRNA Length = 1098 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 ccgccgccgccggcgatgga 245 |||||||||||||||||||| Sbjct: 347 ccgccgccgccggcgatgga 328
>ref|XM_590865.2| PREDICTED: Bos taurus similar to PAX interacting (with transcription-activation domain) protein 1 (LOC513213), mRNA Length = 2715 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 ccgttcccgccgccgccggc 239 |||||||||||||||||||| Sbjct: 1195 ccgttcccgccgccgccggc 1214
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 gcagcacgtagccggccgtc 387 |||||||||||||||||||| Sbjct: 651249 gcagcacgtagccggccgtc 651230
>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence Length = 574126 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 gcgccagcgccaccgccagg 414 |||||||||||||||||||| Sbjct: 401408 gcgccagcgccaccgccagg 401389
>gb|AY813344.1| Schistosoma japonicum SJCHGC02200 protein mRNA, complete cds Length = 954 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 tcttggattatttcatcaaa 34 |||||||||||||||||||| Sbjct: 319 tcttggattatttcatcaaa 338
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 agccgttcccgccgccgccg 237 |||||||||||||||||||| Sbjct: 1997116 agccgttcccgccgccgccg 1997097
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 ccgccgccgccggcgatgga 245 |||||||||||||||||||| Sbjct: 1940149 ccgccgccgccggcgatgga 1940130
>ref|XM_742669.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g03140) partial mRNA Length = 2364 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cgccggcgatggagccgtag 252 |||||||||||||||||||| Sbjct: 1696 cgccggcgatggagccgtag 1677
>gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1006F06, complete sequence Length = 122218 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 ccgccgccgccggcgatgga 245 |||||||||||||||||||| Sbjct: 35262 ccgccgccgccggcgatgga 35281
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 gcagcacgtagccggccgtc 387 |||||||||||||||||||| Sbjct: 459855 gcagcacgtagccggccgtc 459836
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 tcctgcgccagcgccaccgc 410 |||||||||||||||||||| Sbjct: 333459 tcctgcgccagcgccaccgc 333440
>emb|BX004883.18| Zebrafish DNA sequence from clone CH211-152O9, complete sequence Length = 154146 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 aatgacacaaaaaccccatt 85 |||||||||||||||||||| Sbjct: 4207 aatgacacaaaaaccccatt 4188
>gb|AE005797.1| Caulobacter crescentus CB15 section 123 of 359 of the complete genome Length = 13360 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 tgatgaacgccccggccttccacc 340 |||||||||||| ||||||||||| Sbjct: 3214 tgatgaacgccctggccttccacc 3191
>dbj|AK157303.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830210F09 product:weakly similar to Putative L-lactate dehydrogenase (EC 1.1.2.3) [Bordetella parapertussis], full insert sequence Length = 7735 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cgccggcgatggagccgtag 252 |||||||||||||||||||| Sbjct: 5303 cgccggcgatggagccgtag 5284
>emb|AL808027.14| Mouse DNA sequence from clone RP23-161B9 on chromosome 2, complete sequence Length = 241914 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 240 gatggagccgtagctgccctgccc 263 ||||||||| |||||||||||||| Sbjct: 97848 gatggagccctagctgccctgccc 97825
>gb|AC024561.5| Homo sapiens chromosome 5 clone CTB-94B10, complete sequence Length = 155125 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 tcttggattatttcatcaaa 34 |||||||||||||||||||| Sbjct: 25313 tcttggattatttcatcaaa 25294
>dbj|AK018024.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830461H18 product:hypothetical Ras small GTPase, Rab type/Ras small GTPase, Ras type/Ras small GTPase, Rho type containing protein, full insert sequence Length = 1269 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 cggtgagcagagcggggcac 291 |||||||||||||||||||| Sbjct: 568 cggtgagcagagcggggcac 587
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 ccgccgccgccggcgatggagccg 249 ||||| |||||||||||||||||| Sbjct: 5761940 ccgccaccgccggcgatggagccg 5761963
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 435 cgaccccaccaggaacggcgacca 458 ||||| |||||||||||||||||| Sbjct: 7031783 cgaccgcaccaggaacggcgacca 7031806
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cgccgccgccggcgatggag 246 |||||||||||||||||||| Sbjct: 20395302 cgccgccgccggcgatggag 20395283
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 ccgccgccgccggcgatgga 245 |||||||||||||||||||| Sbjct: 1940147 ccgccgccgccggcgatgga 1940128
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 cgccgccggcgatggagccg 249 |||||||||||||||||||| Sbjct: 35397937 cgccgccggcgatggagccg 35397956
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 ccgccgccgccggcgatgga 245 |||||||||||||||||||| Sbjct: 9463958 ccgccgccgccggcgatgga 9463977
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 gccgtctcgtcctgcgccagcgcc 405 ||||||||||||||| |||||||| Sbjct: 3563050 gccgtctcgtcctgctccagcgcc 3563073
>gb|AE004491.1| Pseudomonas aeruginosa PAO1, section 52 of 529 of the complete genome Length = 10297 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cgccgccgccggcgatggag 246 |||||||||||||||||||| Sbjct: 10091 cgccgccgccggcgatggag 10072
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 400 agcgccaccgccaggtacggggcc 423 ||||||||||||||| |||||||| Sbjct: 1491318 agcgccaccgccaggaacggggcc 1491295 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 cccgccgccgccggcgatgg 244 |||||||||||||||||||| Sbjct: 1114133 cccgccgccgccggcgatgg 1114152
>dbj|AP001081.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0693B08 Length = 140812 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 ccgccgccgccggcgatgga 245 |||||||||||||||||||| Sbjct: 134285 ccgccgccgccggcgatgga 134304
>emb|AJ494965.1|OSA494965 Oryza sativa Z252 snoRNA Length = 71 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cgccgccgccggcgatggag 246 |||||||||||||||||||| Sbjct: 56 cgccgccgccggcgatggag 37
>dbj|AP005170.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0080E19 Length = 152755 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 435 cgaccccaccaggaacggcgacca 458 ||||| |||||||||||||||||| Sbjct: 52570 cgaccgcaccaggaacggcgacca 52593
>dbj|AP004785.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0061B07 Length = 124766 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 435 cgaccccaccaggaacggcgacca 458 ||||| |||||||||||||||||| Sbjct: 91210 cgaccgcaccaggaacggcgacca 91233
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1344_B01 Length = 170912 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ccgttcccgccgccgccggc 239 |||||||||||||||||||| Sbjct: 119203 ccgttcccgccgccgccggc 119184
>dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1063_D06 Length = 102439 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 cgccgccggcgatggagccg 249 |||||||||||||||||||| Sbjct: 9458 cgccgccggcgatggagccg 9477
>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C04 Length = 103194 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 cgccgccggcgatggagccg 249 |||||||||||||||||||| Sbjct: 58485 cgccgccggcgatggagccg 58504
>dbj|AK122170.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148D12, full insert sequence Length = 3408 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 ccgccgccgccggcgatggagccg 249 ||||| |||||||||||||||||| Sbjct: 151 ccgccaccgccggcgatggagccg 174
>dbj|AK120318.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056G01, full insert sequence Length = 4017 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 cgccgccggcgatggagccg 249 |||||||||||||||||||| Sbjct: 68 cgccgccggcgatggagccg 87
>dbj|AK106239.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-C09, full insert sequence Length = 1998 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 219 gccgttcccgccgccgccggcgatggag 246 ||||||| ||||||||||||| |||||| Sbjct: 199 gccgttcgcgccgccgccggccatggag 226
>dbj|AK100737.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118C14, full insert sequence Length = 2292 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 ccgccgccgccggcgatgga 245 |||||||||||||||||||| Sbjct: 67 ccgccgccgccggcgatgga 86
>dbj|AK070785.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065D10, full insert sequence Length = 1739 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 435 cgaccccaccaggaacggcgacca 458 ||||| |||||||||||||||||| Sbjct: 728 cgaccgcaccaggaacggcgacca 705
>dbj|AK067277.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099K07, full insert sequence Length = 1626 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cgccgccgccggcgatggag 246 |||||||||||||||||||| Sbjct: 254 cgccgccgccggcgatggag 273
>emb|CT009559.20| Mouse DNA sequence from clone RP23-66A24 on chromosome 14, complete sequence Length = 78271 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 cggtgagcagagcggggcac 291 |||||||||||||||||||| Sbjct: 71463 cggtgagcagagcggggcac 71482
>emb|AL355834.4|CNS05TCN Human chromosome 14 DNA sequence BAC R-932A10 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 222275 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 tcttggattatttcatcaaa 34 |||||||||||||||||||| Sbjct: 97412 tcttggattatttcatcaaa 97431
>emb|AL935300.10| Zebrafish DNA sequence from clone CH211-241E1, complete sequence Length = 157088 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 attatttcatcaaagaagga 40 |||||||||||||||||||| Sbjct: 119181 attatttcatcaaagaagga 119162
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 ccgccgccgccggcgatggagccg 249 ||||| |||||||||||||||||| Sbjct: 5763127 ccgccaccgccggcgatggagccg 5763150
>emb|BX088535.6| Zebrafish DNA sequence from clone DKEY-18F5 in linkage group 14, complete sequence Length = 197465 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 tactaaatatatttcttggattatttca 29 ||||||||||| || ||||||||||||| Sbjct: 91479 tactaaatataattattggattatttca 91506
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 cgccagcgccaccgccaggt 415 |||||||||||||||||||| Sbjct: 2429336 cgccagcgccaccgccaggt 2429317
>gb|AF037440.1|AF037440 Edwardsiella ictaluri D-3-phosphoglycerate dehydrogenase (serA) gene, partial cds; ribose-5-phosphate isomerase (rpiA), inhibitor of chromosome initiation (iciA), putative 26 kDa protein (yggE), putative 30.6 kDa protein (yggB), and fructose 1,6-bisphosphate aldolase (fda) genes, complete cds; and phosphoglycerate kinase (pgk) gene, partial cds Length = 6362 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cgccgccgccggcgatggag 246 |||||||||||||||||||| Sbjct: 6309 cgccgccgccggcgatggag 6328
>emb|CR626891.17| Zebrafish DNA sequence from clone DKEY-33P20 in linkage group 14, complete sequence Length = 187607 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 tactaaatatatttcttggattatttca 29 ||||||||||| || ||||||||||||| Sbjct: 52732 tactaaatataattattggattatttca 52759
>dbj|AP004627.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT01J10b, TM0090b, complete sequence Length = 39905 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 cagagttaggttcagggcca 132 |||||||||||||||||||| Sbjct: 33904 cagagttaggttcagggcca 33885
>gb|U19566.1|HSSCCA1S10 Human squamous cell carcinoma antigen (SCCA1) gene, intron 6, partial sequence Length = 61 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 13 tttcttggattatttcatcaaagaagga 40 |||||||||||||||| | ||||||||| Sbjct: 1 tttcttggattatttcttaaaagaagga 28
>dbj|AB070940.1| Streptomyces avermitilis oligomycin biosynthetic gene cluster Length = 104326 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 gccgtctcgtcctgcgccagcgcc 405 ||||||||||||||| |||||||| Sbjct: 74755 gccgtctcgtcctgctccagcgcc 74732 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,947,305 Number of Sequences: 3902068 Number of extensions: 3947305 Number of successful extensions: 100724 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 103 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97639 Number of HSP's gapped (non-prelim): 3053 length of query: 465 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 443 effective length of database: 17,147,199,772 effective search space: 7596209498996 effective search space used: 7596209498996 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)