ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd21f01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT018048.1| Zea mays clone EL01N0531D04.c mRNA sequence Length = 817 Score = 438 bits (221), Expect = e-120 Identities = 341/381 (89%) Strand = Plus / Minus Query: 112 tcattagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcg 171 |||| |||| ||||||||||||||||| || | |||||| |||||||||||||||||||| Sbjct: 593 tcatcagtccgccgtccagctctgctccacgacctcccgaactttgcggttgtactctcg 534 Query: 172 cttattctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatc 231 ||| ||||| |||||||||||||| ||||| |||||||| |||||||||||||| ||||| Sbjct: 533 cttgttctcgctgaacatgcgggcggcttcagagttagcgggcgaattcgggtttggatc 474 Query: 232 acacagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactg 291 |||| || |||||||| || || ||||| ||||||||||||||||| || |||||||| Sbjct: 473 gcacaacaatgactggattgacgtgagtatcgcagctacatcatatatcggactccactg 414 Query: 292 attctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccg 351 |||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 413 attctgcaggatatctaagcatatgcttccatcagcataaatgttaggatggaacatcct 354 Query: 352 agaaataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcag 411 ||||| ||| || || |||||||| || || |||||||||||||| |||||||||||||| Sbjct: 353 agaaacaaatcgcacagttggtggtttgtttggatattcttcattaaactggagagtcag 294 Query: 412 cttaaacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacag 471 ||||||||||||||| ||||||||| |||||||||| ||||| || |||||||||||||| Sbjct: 293 cttaaacgtacctccatcccacggggtatcatcaggtccaaatatgacagcattccacag 234 Query: 472 cattatgttgttgtcctgcgg 492 |||||||||||| |||||||| Sbjct: 233 cattatgttgttatcctgcgg 213
>gb|AY104593.1| Zea mays PCO096181 mRNA sequence Length = 1003 Score = 438 bits (221), Expect = e-120 Identities = 341/381 (89%) Strand = Plus / Minus Query: 112 tcattagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcg 171 |||| |||| ||||||||||||||||| || | |||||| |||||||||||||||||||| Sbjct: 679 tcatcagtccgccgtccagctctgctccacgacctcccgaactttgcggttgtactctcg 620 Query: 172 cttattctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatc 231 ||| ||||| |||||||||||||| ||||| |||||||| |||||||||||||| ||||| Sbjct: 619 cttgttctcgctgaacatgcgggcggcttcagagttagcgggcgaattcgggtttggatc 560 Query: 232 acacagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactg 291 |||| || |||||||| || || ||||| ||||||||||||||||| || |||||||| Sbjct: 559 gcacaacaatgactggattgacgtgagtatcgcagctacatcatatatcggactccactg 500 Query: 292 attctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccg 351 |||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 499 attctgcaggatatctaagcatatgcttccatcagcataaatgttaggatggaacatcct 440 Query: 352 agaaataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcag 411 ||||| ||| || || |||||||| || || |||||||||||||| |||||||||||||| Sbjct: 439 agaaacaaatcgcacagttggtggtttgtttggatattcttcattaaactggagagtcag 380 Query: 412 cttaaacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacag 471 ||||||||||||||| ||||||||| |||||||||| ||||| || |||||||||||||| Sbjct: 379 cttaaacgtacctccatcccacggggtatcatcaggtccaaatatgacagcattccacag 320 Query: 472 cattatgttgttgtcctgcgg 492 |||||||||||| |||||||| Sbjct: 319 cattatgttgttatcctgcgg 299
>dbj|AK112003.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-F01, full insert sequence Length = 947 Score = 392 bits (198), Expect = e-106 Identities = 330/374 (88%) Strand = Plus / Minus Query: 125 gtccagctctgctcgacaatctcccgcactttgcggttgtactctcgcttattctcactg 184 |||||||||||||| || ||||| || ||||| |||||||| || ||||| ||||||||| Sbjct: 669 gtccagctctgctccactatctcacgaacttttcggttgtattcccgcttgttctcactg 610 Query: 185 aacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacacagcagcgac 244 || | |||||||||||| ||||| ||||| ||||| ||||| ||||| || ||||||||| Sbjct: 609 aataggcgggcagcttcagagttggcaggtgaatttgggtttggatcgcaaagcagcgac 550 Query: 245 tggatggatgtaagtatagcagctacatcatatattgggctccactgattctgtaggata 304 ||||||||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||| Sbjct: 549 tggatggatgtgagtatagcagctacatcatatatggggctccactggttttgtagtata 490 Query: 305 tctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaaataaaccga 364 |||||||||||||| |||||||||||||||||||| |||||||||||||||| ||| || Sbjct: 489 tctaagcatatgctcccatcagcataaatgttaggatgaaacatccgagaaacaaatcgc 430 Query: 365 actgttggtggcttattaggatattcttcattgaactggagagtcagcttaaacgtacct 424 ||||| |||||||| |||||||| |||||| | ||||| || |||||||| ||||||||| Sbjct: 429 actgtaggtggcttgttaggataatcttcagtaaactgaagtgtcagcttgaacgtacct 370 Query: 425 ccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcattatgttgttg 484 || ||||| || ||||||||||||||||||| ||||||||||| |||||||| |||||| Sbjct: 369 ccatcccaaggagtatcatcagggccaaaaattacagcattccaaagcattatattgttg 310 Query: 485 tcctgcggcgcccc 498 ||||| || ||||| Sbjct: 309 tcctgtggggcccc 296
>gb|AY660750.1| Populus tomentosa ubiquitin carrier protein mRNA, complete cds Length = 700 Score = 262 bits (132), Expect = 1e-66 Identities = 312/372 (83%) Strand = Plus / Minus Query: 115 ttagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctt 174 |||||| || |||||||||||||| ||||| || || ||| |||| ||||| || ||||| Sbjct: 653 ttagtcagcagtccagctctgctccacaatttcacgaactctgcgattgtattcccgctt 594 Query: 175 attctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcaca 234 |||||||||||||||||| || ||||| ||||| || || ||||| ||||| |||||||| Sbjct: 593 attctcactgaacatgcgagcggcttcagagtttgctggggaatttgggtttggatcaca 534 Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 ||||| ||||||||||| || ||||||||||| ||||||||||| || ||||||||||| Sbjct: 533 gagcagggactggatggaagttagtatagcagcaacatcatatatgggactccactgatt 474 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 |||| || ||||||||||| |||||||| |||||||| || || |||||||| ||||| Sbjct: 473 ttgtaaaatgtctaagcatatacttccatctgcataaatatttggatgaaacattcgaga 414 Query: 355 aataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagctt 414 | ||| || |||||||| || ||||| ||||| || || |||| || ||||||| ||| Sbjct: 413 gacaaagcggactgttggaggtttatttggataatcctctgtgaattgaagagtcaactt 354 Query: 415 aaacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcat 474 |||||| ||||| ||||| || |||||||||| ||||| || ||||| ||||| ||||| Sbjct: 353 aaacgtccctccatcccaaggagtatcatcaggtccaaatataacagcgttccagagcat 294 Query: 475 tatgttgttgtc 486 ||||||||||| Sbjct: 293 gatgttgttgtc 282
>gb|DQ294271.1| Solanum tuberosum clone 147C03 ubiquitin carrier-like protein mRNA, complete cds Length = 788 Score = 250 bits (126), Expect = 4e-63 Identities = 303/362 (83%) Strand = Plus / Minus Query: 125 gtccagctctgctcgacaatctcccgcactttgcggttgtactctcgcttattctcactg 184 |||||||||||||| ||||| || | |||| |||| |||||||| | |||||||||||| Sbjct: 519 gtccagctctgctccacaatttctctcactctgcgattgtactcccttttattctcactg 460 Query: 185 aacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacacagcagcgac 244 ||||| || || ||||| ||||| ||||| || || ||||| ||||||||||||| ||| Sbjct: 459 aacatccgagctgcttccgagtttgcaggtgagttggggtttggatcacacagcaatgac 400 Query: 245 tggatggatgtaagtatagcagctacatcatatattgggctccactgattctgtaggata 304 || |||||||||||||||||||| |||||||| ||||| ||||| |||||||| || ||| Sbjct: 399 tgaatggatgtaagtatagcagcaacatcataaattggactccattgattctgaagaata 340 Query: 305 tctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaaataaaccga 364 || || ||||| |||||||| |||||||| ||||| |||||||| ||||||| |||||| Sbjct: 339 tccaaacatatacttccatccgcataaatattaggatgaaacattcgagaaacaaaccgc 280 Query: 365 actgttggtggcttattaggatattcttcattgaactggagagtcagcttaaacgtacct 424 || || ||||||||||| || || || ||| ||| || ||||||| ||| |||||||| Sbjct: 279 acggtgggtggcttattggggtaatcctcagagaattgaagagtcaacttgaacgtacca 220 Query: 425 ccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcattatgttgttg 484 || ||||| || | |||||||| ||||| ||||| |||||||| ||||| ||||||||| Sbjct: 219 ccatcccaaggagtgtcatcaggaccaaatatcacggcattccaaagcataatgttgttg 160 Query: 485 tc 486 || Sbjct: 159 tc 158
>gb|AY103578.1| Zea mays PCO136701 mRNA sequence Length = 1179 Score = 246 bits (124), Expect = 6e-62 Identities = 316/380 (83%) Strand = Plus / Minus Query: 116 tagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctta 175 ||||| || |||||||||||||| |||||||| || ||||||||||||||||| ||||| Sbjct: 800 tagtcggctgtccagctctgctccacaatctcgcggactttgcggttgtactcccgcttg 741 Query: 176 ttctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacac 235 ||||| ||||||| | || ||||||||||| ||||| || |||||||| ||||||||| Sbjct: 740 ttctcgctgaacagtcttgcggcttctgagtttgcaggggagttcgggtttggatcacac 681 Query: 236 agcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgattc 295 ||||| |||||||| || || | || ||||| ||||||||||| || |||||||| ||| Sbjct: 680 agcagggactggatagaagtcaagattgcagcaacatcatatataggactccactggttc 621 Query: 296 tgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaa 355 ||||||||||| ||||| ||||||||||||||||| ||||| || |||||||||| ||| Sbjct: 620 tgtaggatatccaagcagatgcttccatcagcatatatgtttggatgaaacatcctagag 561 Query: 356 ataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagctta 415 | |||||||| ||||||||||| || || || ||||| | ||||| | || ||||| Sbjct: 560 acgaaccgaacagttggtggcttgtttgggtaatcttctgtaaactgcaaggtaagcttg 501 Query: 416 aacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcatt 475 ||||| ||||||||||| || ||||||| || || || || || || ||||| ||||| Sbjct: 500 aacgtgcctccgtcccaaggcgtatcatccggcccgaatatgacggcgttccagagcatg 441 Query: 476 atgttgttgtcctgcggcgc 495 ||||||||||| |||||||| Sbjct: 440 atgttgttgtcgtgcggcgc 421
>gb|DQ191625.1| Solanum tuberosum unknown mRNA Length = 791 Score = 242 bits (122), Expect = 9e-61 Identities = 302/362 (83%) Strand = Plus / Minus Query: 125 gtccagctctgctcgacaatctcccgcactttgcggttgtactctcgcttattctcactg 184 |||||||||||||| ||||| || | |||| |||| |||||||| | |||||||||||| Sbjct: 518 gtccagctctgctccacaatttctctcactctgcgattgtactcccttttattctcactg 459 Query: 185 aacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacacagcagcgac 244 ||||| || || ||||| ||||| ||||| || || ||||| ||||||||||||| ||| Sbjct: 458 aacatccgagctgcttccgagtttgcaggtgagttggggtttggatcacacagcaatgac 399 Query: 245 tggatggatgtaagtatagcagctacatcatatattgggctccactgattctgtaggata 304 || |||||||||||||||||||| |||||||| ||||| ||||| |||||||| || ||| Sbjct: 398 tgaatggatgtaagtatagcagcaacatcataaattggactccattgattctgaagaata 339 Query: 305 tctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaaataaaccga 364 || || ||||| |||||||| |||||||| ||||| |||||||| ||||||| |||||| Sbjct: 338 tccaaacatatacttccatccgcataaatattaggatgaaacattcgagaaacaaaccgc 279 Query: 365 actgttggtggcttattaggatattcttcattgaactggagagtcagcttaaacgtacct 424 || || | ||||||||| || || || ||| ||| || ||||||| ||| |||||||| Sbjct: 278 acggtggatggcttattggggtaatcctcagagaattgaagagtcaacttgaacgtacca 219 Query: 425 ccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcattatgttgttg 484 || ||||| || | |||||||| ||||| ||||| |||||||| ||||| ||||||||| Sbjct: 218 ccatcccaaggagtgtcatcaggaccaaatatcacggcattccaaagcataatgttgttg 159 Query: 485 tc 486 || Sbjct: 158 tc 157
>ref|XM_476729.1| Oryza sativa (japonica cultivar-group), mRNA Length = 459 Score = 238 bits (120), Expect = 1e-59 Identities = 315/380 (82%) Strand = Plus / Minus Query: 116 tagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctta 175 ||||| || |||||||||||||| || ||||| || || |||||||||||||||||||| Sbjct: 458 tagtcagctgtccagctctgctccacgatctcacgaaccttgcggttgtactctcgcttg 399 Query: 176 ttctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacac 235 |||||||| |||| | ||||||||||||||| || || || || ||||| ||||||||| Sbjct: 398 ttctcactaaacagtctggcagcttctgagtttgctggagagttggggtttggatcacac 339 Query: 236 agcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgattc 295 |||| ||||| || || || | ||| ||||| ||||||||||| ||||||||||| ||| Sbjct: 338 agcaaagactgaattgaagtcaatatggcagcaacatcatatatagggctccactggttc 279 Query: 296 tgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaa 355 ||||| ||||| ||||| ||||||||||| |||||||| || ||||| ||||||| |||| Sbjct: 278 tgtagaatatccaagcagatgcttccatctgcataaatatttgggtggaacatcctagaa 219 Query: 356 ataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagctta 415 | ||||||||| || || ||||| || ||||| ||||| | ||||| | || ||||| Sbjct: 218 acaaaccgaacagtcggcggcttgttgggataatcttctgtaaactgcaaggtaagcttg 159 Query: 416 aacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcatt 475 ||||| |||||||||||||| ||||||| || || || || || || ||||| ||||| Sbjct: 158 aacgtgcctccgtcccacggcgtatcatccggcccgaagatgacggcgttccagagcatg 99 Query: 476 atgttgttgtcctgcggcgc 495 ||||||||||| |||||||| Sbjct: 98 atgttgttgtcgtgcggcgc 79
>dbj|AK121382.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127H21, full insert sequence Length = 895 Score = 238 bits (120), Expect = 1e-59 Identities = 315/380 (82%) Strand = Plus / Minus Query: 116 tagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctta 175 ||||| || |||||||||||||| || ||||| || || |||||||||||||||||||| Sbjct: 613 tagtcagctgtccagctctgctccacgatctcacgaaccttgcggttgtactctcgcttg 554 Query: 176 ttctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacac 235 |||||||| |||| | ||||||||||||||| || || || || ||||| ||||||||| Sbjct: 553 ttctcactaaacagtctggcagcttctgagtttgctggagagttggggtttggatcacac 494 Query: 236 agcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgattc 295 |||| ||||| || || || | ||| ||||| ||||||||||| ||||||||||| ||| Sbjct: 493 agcaaagactgaattgaagtcaatatggcagcaacatcatatatagggctccactggttc 434 Query: 296 tgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaa 355 ||||| ||||| ||||| ||||||||||| |||||||| || ||||| ||||||| |||| Sbjct: 433 tgtagaatatccaagcagatgcttccatctgcataaatatttgggtggaacatcctagaa 374 Query: 356 ataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagctta 415 | ||||||||| || || ||||| || ||||| ||||| | ||||| | || ||||| Sbjct: 373 acaaaccgaacagtcggcggcttgttgggataatcttctgtaaactgcaaggtaagcttg 314 Query: 416 aacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcatt 475 ||||| |||||||||||||| ||||||| || || || || || || ||||| ||||| Sbjct: 313 aacgtgcctccgtcccacggcgtatcatccggcccgaagatgacggcgttccagagcatg 254 Query: 476 atgttgttgtcctgcggcgc 495 ||||||||||| |||||||| Sbjct: 253 atgttgttgtcgtgcggcgc 234
>dbj|AK070524.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055G02, full insert sequence Length = 4109 Score = 238 bits (120), Expect = 1e-59 Identities = 315/380 (82%) Strand = Plus / Minus Query: 116 tagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctta 175 ||||| || |||||||||||||| || ||||| || || |||||||||||||||||||| Sbjct: 569 tagtcagctgtccagctctgctccacgatctcacgaaccttgcggttgtactctcgcttg 510 Query: 176 ttctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacac 235 |||||||| |||| | ||||||||||||||| || || || || ||||| ||||||||| Sbjct: 509 ttctcactaaacagtctggcagcttctgagtttgctggagagttggggtttggatcacac 450 Query: 236 agcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgattc 295 |||| ||||| || || || | ||| ||||| ||||||||||| ||||||||||| ||| Sbjct: 449 agcaaagactgaattgaagtcaatatggcagcaacatcatatatagggctccactggttc 390 Query: 296 tgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaa 355 ||||| ||||| ||||| ||||||||||| |||||||| || ||||| ||||||| |||| Sbjct: 389 tgtagaatatccaagcagatgcttccatctgcataaatatttgggtggaacatcctagaa 330 Query: 356 ataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagctta 415 | ||||||||| || || ||||| || ||||| ||||| | ||||| | || ||||| Sbjct: 329 acaaaccgaacagtcggcggcttgttgggataatcttctgtaaactgcaaggtaagcttg 270 Query: 416 aacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcatt 475 ||||| |||||||||||||| ||||||| || || || || || || ||||| ||||| Sbjct: 269 aacgtgcctccgtcccacggcgtatcatccggcccgaagatgacggcgttccagagcatg 210 Query: 476 atgttgttgtcctgcggcgc 495 ||||||||||| |||||||| Sbjct: 209 atgttgttgtcgtgcggcgc 190
>gb|M62720.1|WHTUCP1A Wheat ubiquitin carrier protein (UBC1) mRNA, complete cds Length = 773 Score = 238 bits (120), Expect = 1e-59 Identities = 315/380 (82%) Strand = Plus / Minus Query: 116 tagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctta 175 ||||| || |||||||||||||| || | ||| || || |||||||||||||| ||||| Sbjct: 574 tagtccgctgtccagctctgctccacgacctcacgaaccttgcggttgtactcgcgcttg 515 Query: 176 ttctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacac 235 ||||| ||| |||| | ||| ||||| ||||| ||||| ||||||||||| || || ||| Sbjct: 514 ttctcgctgtacattctggctgcttcagagttcgcaggagaattcgggttcgggtcgcac 455 Query: 236 agcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgattc 295 ||||| |||||||| || || | ||| || || ||||||||||| ||||||||||| ||| Sbjct: 454 agcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggttc 395 Query: 296 tgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaa 355 |||||||| || ||||| ||||||||||| ||||||||||| ||||||||||||| || Sbjct: 394 tgtaggatgtccaagcagatgcttccatctgcataaatgtttgggtgaaacatccttgag 335 Query: 356 ataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagctta 415 | ||||||||| ||||||||||| || || || ||||| |||| || || |||||||| Sbjct: 334 acaaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagcttg 275 Query: 416 aacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcatt 475 ||||||||||| |||||||| | |||||||| ||||| || || || ||||| || | Sbjct: 274 aacgtacctccatcccacggcgtgtcatcaggcccaaatatgacggcgttccagagggtg 215 Query: 476 atgttgttgtcctgcggcgc 495 ||||||||||| |||||||| Sbjct: 214 atgttgttgtcgtgcggcgc 195
>dbj|AK111549.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057C14, full insert sequence Length = 2920 Score = 230 bits (116), Expect = 4e-57 Identities = 185/208 (88%) Strand = Plus / Minus Query: 125 gtccagctctgctcgacaatctcccgcactttgcggttgtactctcgcttattctcactg 184 |||||||||||||| || ||||| || ||||| |||||||| || ||||| ||||||||| Sbjct: 2655 gtccagctctgctccactatctcacgaacttttcggttgtattcccgcttgttctcactg 2596 Query: 185 aacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacacagcagcgac 244 || | |||||||||||| ||||| ||||| ||||| ||||| ||||| || ||||||||| Sbjct: 2595 aataggcgggcagcttcagagttggcaggtgaatttgggtttggatcgcaaagcagcgac 2536 Query: 245 tggatggatgtaagtatagcagctacatcatatattgggctccactgattctgtaggata 304 ||||||||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||| Sbjct: 2535 tggatggatgtgagtatagcagctacatcatatatggggctccactggttttgtagtata 2476 Query: 305 tctaagcatatgcttccatcagcataaa 332 |||||||||||||| ||||||||||||| Sbjct: 2475 tctaagcatatgctcccatcagcataaa 2448 Score = 163 bits (82), Expect = 7e-37 Identities = 145/166 (87%) Strand = Plus / Minus Query: 333 tgttagggtgaaacatccgagaaataaaccgaactgttggtggcttattaggatattctt 392 ||||||| |||||||||||||||| ||| || ||||| |||||||| |||||||| |||| Sbjct: 482 tgttaggatgaaacatccgagaaacaaatcgcactgtaggtggcttgttaggataatctt 423 Query: 393 cattgaactggagagtcagcttaaacgtacctccgtcccacgggctatcatcagggccaa 452 || | ||||| || |||||||| ||||||||||| ||||| || ||||||||||||||| Sbjct: 422 cagtaaactgaagtgtcagcttgaacgtacctccatcccaaggagtatcatcagggccaa 363 Query: 453 aaatcacagcattccacagcattatgttgttgtcctgcggcgcccc 498 |||| ||||||||||| |||||||| ||||||||||| || ||||| Sbjct: 362 aaattacagcattccaaagcattatattgttgtcctgtggggcccc 317
>dbj|AB026055.1| Nicotiana tabacum Ntubc1 mRNA for ubiquitin-conjugating enzyme (E2), complete cds Length = 809 Score = 226 bits (114), Expect = 6e-56 Identities = 306/370 (82%) Strand = Plus / Minus Query: 117 agtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgcttat 176 ||||||| ||||||||||| || |||||||| ||||| || | |||||| || ||||| | Sbjct: 543 agtctgctgtccagctctgttcaacaatctcgcgcaccttcctgttgtattcacgcttgt 484 Query: 177 tctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacaca 236 |||||||||||||||| || |||||||| ||||| ||||| || || || |||||||| | Sbjct: 483 tctcactgaacatgcgtgctgcttctgaattagctggcgagttgggatttggatcacaga 424 Query: 237 gcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgattct 296 ||| |||||||| || || ||||||||||||||||||||||| || ||||| ||||| | Sbjct: 423 gcaaagactggattgaagtcagtatagcagctacatcatatatgggactccattgatttt 364 Query: 297 gtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaaa 356 | ||||| || ||||| || ||||||||||| ||||| || ||||| ||||| | |||| Sbjct: 363 gcaggatgtccaagcaaatacttccatcagcgtaaatatttgggtggaacattctggaaa 304 Query: 357 taaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagcttaa 416 |||| || || |||||||| || || ||||| || || ||| || || |||||||||| Sbjct: 303 taaatcgcacagttggtggtttgtttggatagtcctctgagaattgaagtgtcagcttaa 244 Query: 417 acgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcatta 476 | |||||||| ||||| || ||||||||||||| ||||| || |||||||| ||||||| Sbjct: 243 atgtacctccatcccaaggagtatcatcagggccgaaaatgactgcattccatagcatta 184 Query: 477 tgttgttgtc 486 | |||||||| Sbjct: 183 tattgttgtc 174
>ref|XM_469945.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1025 Score = 224 bits (113), Expect = 2e-55 Identities = 314/381 (82%) Strand = Plus / Minus Query: 115 ttagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctt 174 |||||| ||||||||||||||||| |||||||| || ||||||||||||||||| ||||| Sbjct: 640 ttagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgctt 581 Query: 175 attctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcaca 234 ||||| ||||||| | ||| ||||| ||||| ||||| || || ||||| |||||||| Sbjct: 580 gttctcgctgaacagtctggctgcttcggagtttgcaggggagtttgggtttggatcaca 521 Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 ||||| |||||||| || || | ||| ||||| ||||||||||| |||||||| ||||| Sbjct: 520 gagcagggactggatagaggtcaatatcgcagcaacatcatatatagggctccattgatt 461 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||||||||||| ||||| || |||||||| |||||||| || ||||||||||||| || Sbjct: 460 ttgtaggatatccaagcagatacttccatctgcataaatatttgggtgaaacatccttga 401 Query: 355 aataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagctt 414 | ||||||||| |||||| || || ||||| ||||| | || || || |||||||| Sbjct: 400 gacaaaccgaacaactggtggtttgttgggataatcttctgtaaattgtagtgtcagctt 341 Query: 415 aaacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcat 474 ||||| ||||| |||||||| | ||||| || || || || || || ||||| ||||| Sbjct: 340 gaacgtgcctccatcccacggcgtgtcatccggtccgaatatgacggcgttccagagcat 281 Query: 475 tatgttgttgtcctgcggcgc 495 ||||||||||| |||||||| Sbjct: 280 gatgttgttgtcgtgcggcgc 260
>dbj|AB079798.1| Oryza sativa (japonica cultivar-group) OsRad6 mRNA for Rad6, complete cds Length = 764 Score = 224 bits (113), Expect = 2e-55 Identities = 314/381 (82%) Strand = Plus / Minus Query: 115 ttagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctt 174 |||||| ||||||||||||||||| |||||||| || ||||||||||||||||| ||||| Sbjct: 633 ttagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgctt 574 Query: 175 attctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcaca 234 ||||| ||||||| | ||| ||||| ||||| ||||| || || ||||| |||||||| Sbjct: 573 gttctcgctgaacagtctggctgcttcggagtttgcaggggagtttgggtttggatcaca 514 Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 ||||| |||||||| || || | ||| ||||| ||||||||||| |||||||| ||||| Sbjct: 513 gagcagggactggatagaggtcaatatcgcagcaacatcatatatagggctccattgatt 454 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||||||||||| ||||| || |||||||| |||||||| || ||||||||||||| || Sbjct: 453 ttgtaggatatccaagcagatacttccatctgcataaatatttgggtgaaacatccttga 394 Query: 355 aataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagctt 414 | ||||||||| |||||| || || ||||| ||||| | || || || |||||||| Sbjct: 393 gacaaaccgaacaactggtggtttgttgggataatcttctgtaaattgtagtgtcagctt 334 Query: 415 aaacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcat 474 ||||| ||||| |||||||| | ||||| || || || || || || ||||| ||||| Sbjct: 333 gaacgtgcctccatcccacggcgtgtcatccggtccgaatatgacggcgttccagagcat 274 Query: 475 tatgttgttgtcctgcggcgc 495 ||||||||||| |||||||| Sbjct: 273 gatgttgttgtcgtgcggcgc 253
>dbj|AK120251.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045G10, full insert sequence Length = 847 Score = 224 bits (113), Expect = 2e-55 Identities = 314/381 (82%) Strand = Plus / Minus Query: 115 ttagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctt 174 |||||| ||||||||||||||||| |||||||| || ||||||||||||||||| ||||| Sbjct: 640 ttagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgctt 581 Query: 175 attctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcaca 234 ||||| ||||||| | ||| ||||| ||||| ||||| || || ||||| |||||||| Sbjct: 580 gttctcgctgaacagtctggctgcttcggagtttgcaggggagtttgggtttggatcaca 521 Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 ||||| |||||||| || || | ||| ||||| ||||||||||| |||||||| ||||| Sbjct: 520 gagcagggactggatagaggtcaatatcgcagcaacatcatatatagggctccattgatt 461 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||||||||||| ||||| || |||||||| |||||||| || ||||||||||||| || Sbjct: 460 ttgtaggatatccaagcagatacttccatctgcataaatatttgggtgaaacatccttga 401 Query: 355 aataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagctt 414 | ||||||||| |||||| || || ||||| ||||| | || || || |||||||| Sbjct: 400 gacaaaccgaacaactggtggtttgttgggataatcttctgtaaattgtagtgtcagctt 341 Query: 415 aaacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcat 474 ||||| ||||| |||||||| | ||||| || || || || || || ||||| ||||| Sbjct: 340 gaacgtgcctccatcccacggcgtgtcatccggtccgaatatgacggcgttccagagcat 281 Query: 475 tatgttgttgtcctgcggcgc 495 ||||||||||| |||||||| Sbjct: 280 gatgttgttgtcgtgcggcgc 260
>dbj|AK067703.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116J09, full insert sequence Length = 882 Score = 224 bits (113), Expect = 2e-55 Identities = 314/381 (82%) Strand = Plus / Minus Query: 115 ttagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctt 174 |||||| ||||||||||||||||| |||||||| || ||||||||||||||||| ||||| Sbjct: 626 ttagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgctt 567 Query: 175 attctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcaca 234 ||||| ||||||| | ||| ||||| ||||| ||||| || || ||||| |||||||| Sbjct: 566 gttctcgctgaacagtctggctgcttcggagtttgcaggggagtttgggtttggatcaca 507 Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 ||||| |||||||| || || | ||| ||||| ||||||||||| |||||||| ||||| Sbjct: 506 gagcagggactggatagaggtcaatatcgcagcaacatcatatatagggctccattgatt 447 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||||||||||| ||||| || |||||||| |||||||| || ||||||||||||| || Sbjct: 446 ttgtaggatatccaagcagatacttccatctgcataaatatttgggtgaaacatccttga 387 Query: 355 aataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagctt 414 | ||||||||| |||||| || || ||||| ||||| | || || || |||||||| Sbjct: 386 gacaaaccgaacaactggtggtttgttgggataatcttctgtaaattgtagtgtcagctt 327 Query: 415 aaacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcat 474 ||||| ||||| |||||||| | ||||| || || || || || || ||||| ||||| Sbjct: 326 gaacgtgcctccatcccacggcgtgtcatccggtccgaatatgacggcgttccagagcat 267 Query: 475 tatgttgttgtcctgcggcgc 495 ||||||||||| |||||||| Sbjct: 266 gatgttgttgtcgtgcggcgc 246
>emb|AJ843121.1| Plantago major mRNA for Ubiquitin-conjugating enzyme (ubc2 gene) Length = 858 Score = 220 bits (111), Expect = 3e-54 Identities = 294/355 (82%) Strand = Plus / Minus Query: 114 attagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgct 173 ||||||| || ||||| || ||||| |||||||| ||||| || | |||||| || |||| Sbjct: 600 attagtcggctgtccaactttgctccacaatctcacgcaccttcctgttgtaatcacgct 541 Query: 174 tattctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcac 233 | || |||||||||| || |||||||| ||||| ||||| ||||| || || ||||||| Sbjct: 540 tgttttcactgaacaaccgtgcagcttccgagtttgcaggtgaatttggatttggatcac 481 Query: 234 acagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgat 293 | |||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 480 agagcagcgactggatagatgtaagtattgcagctacatcatatattggactccactgat 421 Query: 294 tctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgag 353 | || |||||||| ||||| || |||||||||||||||||||| || || ||||| | | Sbjct: 420 tttgcaggatatccaagcaaatacttccatcagcataaatgttgggatggaacattctgg 361 Query: 354 aaataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagct 413 | ||||| || || ||||||||||| || || || || || ||| || ||||||| || Sbjct: 360 atataaatcgcacagttggtggcttgttcgggtagtcctccgagaattgtagagtcaact 301 Query: 414 taaacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattcca 468 ||||||||||||| ||||| || ||||||| || ||||| || ||||| ||||| Sbjct: 300 taaacgtacctccatcccaaggagtatcatccggaccaaatataacagcgttcca 246
>ref|NM_202096.1| Arabidopsis thaliana UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G14400 (UBC1) transcript variant AT1G14400.2 mRNA, complete cds Length = 819 Score = 218 bits (110), Expect = 1e-53 Identities = 308/374 (82%) Strand = Plus / Minus Query: 116 tagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctta 175 ||||| || |||||||| ||||| |||| || |||||| | | ||||||||| ||||| Sbjct: 550 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 491 Query: 176 ttctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacac 235 | || ||| |||| || |||||||| ||||| ||||| |||||||| ||||| ||||| Sbjct: 490 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 431 Query: 236 agcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgattc 295 |||| ||||||||||| |||||||||||||| |||||||| ||||| |||||||| || Sbjct: 430 agcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggttt 371 Query: 296 tgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaa 355 ||||| || || ||||| || || ||||| |||||||| ||||| ||||||||||| || Sbjct: 370 tgtagaatgtccaagcagatactcccatctgcataaatattaggatgaaacatccgtgac 311 Query: 356 ataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagctta 415 | |||||||||||||||||| ||||| ||||| |||||| |||||| || | || || Sbjct: 310 acaaaccgaactgttggtggtttattgggataatcttcagagaactgcagtgagagtttg 251 Query: 416 aacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcatt 475 || |||||||| ||||| || | |||||||| ||||| || ||||||||||| ||||| Sbjct: 250 aaagtacctccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcata 191 Query: 476 atgttgttgtcctg 489 |||||||||||||| Sbjct: 190 atgttgttgtcctg 177
>ref|NM_101307.2| Arabidopsis thaliana UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G14400 (UBC1) transcript variant AT1G14400.1 mRNA, complete cds Length = 948 Score = 218 bits (110), Expect = 1e-53 Identities = 308/374 (82%) Strand = Plus / Minus Query: 116 tagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctta 175 ||||| || |||||||| ||||| |||| || |||||| | | ||||||||| ||||| Sbjct: 679 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 620 Query: 176 ttctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacac 235 | || ||| |||| || |||||||| ||||| ||||| |||||||| ||||| ||||| Sbjct: 619 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 560 Query: 236 agcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgattc 295 |||| ||||||||||| |||||||||||||| |||||||| ||||| |||||||| || Sbjct: 559 agcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggttt 500 Query: 296 tgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaa 355 ||||| || || ||||| || || ||||| |||||||| ||||| ||||||||||| || Sbjct: 499 tgtagaatgtccaagcagatactcccatctgcataaatattaggatgaaacatccgtgac 440 Query: 356 ataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagctta 415 | |||||||||||||||||| ||||| ||||| |||||| |||||| || | || || Sbjct: 439 acaaaccgaactgttggtggtttattgggataatcttcagagaactgcagtgagagtttg 380 Query: 416 aacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcatt 475 || |||||||| ||||| || | |||||||| ||||| || ||||||||||| ||||| Sbjct: 379 aaagtacctccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcata 320 Query: 476 atgttgttgtcctg 489 |||||||||||||| Sbjct: 319 atgttgttgtcctg 306
>gb|AF332451.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme 1 (At1g14400) mRNA, complete cds Length = 459 Score = 218 bits (110), Expect = 1e-53 Identities = 308/374 (82%) Strand = Plus / Minus Query: 116 tagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctta 175 ||||| || |||||||| ||||| |||| || |||||| | | ||||||||| ||||| Sbjct: 458 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 399 Query: 176 ttctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacac 235 | || ||| |||| || |||||||| ||||| ||||| |||||||| ||||| ||||| Sbjct: 398 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 339 Query: 236 agcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgattc 295 |||| ||||||||||| |||||||||||||| |||||||| ||||| |||||||| || Sbjct: 338 agcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggttt 279 Query: 296 tgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaa 355 ||||| || || ||||| || || ||||| |||||||| ||||| ||||||||||| || Sbjct: 278 tgtagaatgtccaagcagatactcccatctgcataaatattaggatgaaacatccgtgac 219 Query: 356 ataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagctta 415 | |||||||||||||||||| ||||| ||||| |||||| |||||| || | || || Sbjct: 218 acaaaccgaactgttggtggtttattgggataatcttcagagaactgcagtgagagtttg 159 Query: 416 aacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcatt 475 || |||||||| ||||| || | |||||||| ||||| || ||||||||||| ||||| Sbjct: 158 aaagtacctccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcata 99 Query: 476 atgttgttgtcctg 489 |||||||||||||| Sbjct: 98 atgttgttgtcctg 85
>gb|AY091330.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme 1 (UBC1) (At1g14400) mRNA, complete cds Length = 490 Score = 218 bits (110), Expect = 1e-53 Identities = 308/374 (82%) Strand = Plus / Minus Query: 116 tagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctta 175 ||||| || |||||||| ||||| |||| || |||||| | | ||||||||| ||||| Sbjct: 458 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 399 Query: 176 ttctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacac 235 | || ||| |||| || |||||||| ||||| ||||| |||||||| ||||| ||||| Sbjct: 398 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 339 Query: 236 agcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgattc 295 |||| ||||||||||| |||||||||||||| |||||||| ||||| |||||||| || Sbjct: 338 agcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggttt 279 Query: 296 tgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaa 355 ||||| || || ||||| || || ||||| |||||||| ||||| ||||||||||| || Sbjct: 278 tgtagaatgtccaagcagatactcccatctgcataaatattaggatgaaacatccgtgac 219 Query: 356 ataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagctta 415 | |||||||||||||||||| ||||| ||||| |||||| |||||| || | || || Sbjct: 218 acaaaccgaactgttggtggtttattgggataatcttcagagaactgcagtgagagtttg 159 Query: 416 aacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcatt 475 || |||||||| ||||| || | |||||||| ||||| || ||||||||||| ||||| Sbjct: 158 aaagtacctccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcata 99 Query: 476 atgttgttgtcctg 489 |||||||||||||| Sbjct: 98 atgttgttgtcctg 85
>gb|AY070074.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC1 (At1g14400) mRNA, complete cds Length = 839 Score = 218 bits (110), Expect = 1e-53 Identities = 308/374 (82%) Strand = Plus / Minus Query: 116 tagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctta 175 ||||| || |||||||| ||||| |||| || |||||| | | ||||||||| ||||| Sbjct: 631 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 572 Query: 176 ttctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacac 235 | || ||| |||| || |||||||| ||||| ||||| |||||||| ||||| ||||| Sbjct: 571 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 512 Query: 236 agcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgattc 295 |||| ||||||||||| |||||||||||||| |||||||| ||||| |||||||| || Sbjct: 511 agcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggttt 452 Query: 296 tgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaa 355 ||||| || || ||||| || || ||||| |||||||| ||||| ||||||||||| || Sbjct: 451 tgtagaatgtccaagcagatactcccatctgcataaatattaggatgaaacatccgtgac 392 Query: 356 ataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagctta 415 | |||||||||||||||||| ||||| ||||| |||||| |||||| || | || || Sbjct: 391 acaaaccgaactgttggtggtttattgggataatcttcagagaactgcagtgagagtttg 332 Query: 416 aacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcatt 475 || |||||||| ||||| || | |||||||| ||||| || ||||||||||| ||||| Sbjct: 331 aaagtacctccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcata 272 Query: 476 atgttgttgtcctg 489 |||||||||||||| Sbjct: 271 atgttgttgtcctg 258
>emb|BX816760.1|CNS0AD3H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZB10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 847 Score = 218 bits (110), Expect = 1e-53 Identities = 308/374 (82%) Strand = Plus / Minus Query: 116 tagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctta 175 ||||| || |||||||| ||||| |||| || |||||| | | ||||||||| ||||| Sbjct: 604 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 545 Query: 176 ttctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacac 235 | || ||| |||| || |||||||| ||||| ||||| |||||||| ||||| ||||| Sbjct: 544 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 485 Query: 236 agcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgattc 295 |||| ||||||||||| |||||||||||||| |||||||| ||||| |||||||| || Sbjct: 484 agcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggttt 425 Query: 296 tgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaa 355 ||||| || || ||||| || || ||||| |||||||| ||||| ||||||||||| || Sbjct: 424 tgtagaatgtccaagcagatactcccatctgcataaatattaggatgaaacatccgtgac 365 Query: 356 ataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagctta 415 | |||||||||||||||||| ||||| ||||| |||||| |||||| || | || || Sbjct: 364 acaaaccgaactgttggtggtttattgggataatcttcagagaactgcagtgagagtttg 305 Query: 416 aacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcatt 475 || |||||||| ||||| || | |||||||| ||||| || ||||||||||| ||||| Sbjct: 304 aaagtacctccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcata 245 Query: 476 atgttgttgtcctg 489 |||||||||||||| Sbjct: 244 atgttgttgtcctg 231
>gb|AY085783.1| Arabidopsis thaliana clone 18146 mRNA, complete sequence Length = 838 Score = 218 bits (110), Expect = 1e-53 Identities = 308/374 (82%) Strand = Plus / Minus Query: 116 tagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctta 175 ||||| || |||||||| ||||| |||| || |||||| | | ||||||||| ||||| Sbjct: 679 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 620 Query: 176 ttctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacac 235 | || ||| |||| || |||||||| ||||| ||||| |||||||| ||||| ||||| Sbjct: 619 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 560 Query: 236 agcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgattc 295 |||| ||||||||||| |||||||||||||| |||||||| ||||| |||||||| || Sbjct: 559 agcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggttt 500 Query: 296 tgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaa 355 ||||| || || ||||| || || ||||| |||||||| ||||| ||||||||||| || Sbjct: 499 tgtagaatgtccaagcagatactcccatctgcataaatattaggatgaaacatccgtgac 440 Query: 356 ataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagctta 415 | |||||||||||||||||| ||||| ||||| |||||| |||||| || | || || Sbjct: 439 acaaaccgaactgttggtggtttattgggataatcttcagagaactgcagtgagagtttg 380 Query: 416 aacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcatt 475 || |||||||| ||||| || | |||||||| ||||| || ||||||||||| ||||| Sbjct: 379 aaagtacctccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcata 320 Query: 476 atgttgttgtcctg 489 |||||||||||||| Sbjct: 319 atgttgttgtcctg 306
>gb|DQ027016.1| Arabidopsis thaliana ubiquitinating enzyme (At1g14400) mRNA, complete cds Length = 459 Score = 218 bits (110), Expect = 1e-53 Identities = 308/374 (82%) Strand = Plus / Minus Query: 116 tagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctta 175 ||||| || |||||||| ||||| |||| || |||||| | | ||||||||| ||||| Sbjct: 458 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 399 Query: 176 ttctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacac 235 | || ||| |||| || |||||||| ||||| ||||| |||||||| ||||| ||||| Sbjct: 398 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 339 Query: 236 agcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgattc 295 |||| ||||||||||| |||||||||||||| |||||||| ||||| |||||||| || Sbjct: 338 agcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggttt 279 Query: 296 tgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaa 355 ||||| || || ||||| || || ||||| |||||||| ||||| ||||||||||| || Sbjct: 278 tgtagaatgtccaagcagatactcccatctgcataaatattaggatgaaacatccgtgac 219 Query: 356 ataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagctta 415 | |||||||||||||||||| ||||| ||||| |||||| |||||| || | || || Sbjct: 218 acaaaccgaactgttggtggtttattgggataatcttcagagaactgcagtgagagtttg 159 Query: 416 aacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcatt 475 || |||||||| ||||| || | |||||||| ||||| || ||||||||||| ||||| Sbjct: 158 aaagtacctccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcata 99 Query: 476 atgttgttgtcctg 489 |||||||||||||| Sbjct: 98 atgttgttgtcctg 85
>gb|M62721.1|ATHUCP1B Arabidopsis thaliana ubiquitin carrier protein (UBC1) mRNA, complete cds Length = 749 Score = 218 bits (110), Expect = 1e-53 Identities = 308/374 (82%) Strand = Plus / Minus Query: 116 tagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctta 175 ||||| || |||||||| ||||| |||| || |||||| | | ||||||||| ||||| Sbjct: 557 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 498 Query: 176 ttctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacac 235 | || ||| |||| || |||||||| ||||| ||||| |||||||| ||||| ||||| Sbjct: 497 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 438 Query: 236 agcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgattc 295 |||| ||||||||||| |||||||||||||| |||||||| ||||| |||||||| || Sbjct: 437 agcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggttt 378 Query: 296 tgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaa 355 ||||| || || ||||| || || ||||| |||||||| ||||| ||||||||||| || Sbjct: 377 tgtagaatgtccaagcagatactcccatctgcataaatattaggatgaaacatccgtgac 318 Query: 356 ataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagctta 415 | |||||||||||||||||| ||||| ||||| |||||| |||||| || | || || Sbjct: 317 acaaaccgaactgttggtggtttattgggataatcttcagagaactgcagtgagagtttg 258 Query: 416 aacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcatt 475 || |||||||| ||||| || | |||||||| ||||| || ||||||||||| ||||| Sbjct: 257 aaagtacctccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcata 198 Query: 476 atgttgttgtcctg 489 |||||||||||||| Sbjct: 197 atgttgttgtcctg 184
>emb|BX817066.1|CNS0AD3L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH83ZF07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 817 Score = 216 bits (109), Expect = 5e-53 Identities = 301/365 (82%) Strand = Plus / Minus Query: 125 gtccagctctgctcgacaatctcccgcactttgcggttgtactctcgcttattctcactg 184 |||||||| ||||| |||| || |||||| | | ||||||||| ||||| | || ||| Sbjct: 642 gtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttgctttcgctg 583 Query: 185 aacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacacagcagcgac 244 |||| || |||||||| ||||| ||||| |||||||| ||||| ||||| |||| ||| Sbjct: 582 tacatccgagcagcttccgagtttgcaggagaattcggattagggtcacagagcaaggac 523 Query: 245 tggatggatgtaagtatagcagctacatcatatattgggctccactgattctgtaggata 304 |||||||| |||||||||||||| |||||||| ||||| |||||||| || ||||| || Sbjct: 522 tggatggaggtaagtatagcagcaacatcatagattggactccactggttttgtagaatg 463 Query: 305 tctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaaataaaccga 364 || ||||| || || ||||| |||||||| ||||| ||||||||||| || | ||||||| Sbjct: 462 tccaagcagatactcccatctgcataaatattaggatgaaacatccgtgacacaaaccga 403 Query: 365 actgttggtggcttattaggatattcttcattgaactggagagtcagcttaaacgtacct 424 ||||||||||| ||||| ||||| |||||| |||||| || | || || || |||||| Sbjct: 402 actgttggtggtttattgggataatcttcagagaactgcagtgagagtttgaaagtacct 343 Query: 425 ccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcattatgttgttg 484 || ||||| || | |||||||| ||||| || ||||||||||| ||||| ||||||||| Sbjct: 342 ccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcataatgttgttg 283 Query: 485 tcctg 489 ||||| Sbjct: 282 tcctg 278
>gb|BT016345.1| Zea mays clone Contig178 mRNA sequence Length = 965 Score = 214 bits (108), Expect = 2e-52 Identities = 312/380 (82%) Strand = Plus / Plus Query: 116 tagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctta 175 ||||| || |||||||||||||| |||||||| || |||||||||| | |||| ||||| Sbjct: 357 tagtcggctgtccagctctgctccacaatctcgcggactttgcggtggaactcccgcttg 416 Query: 176 ttctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacac 235 ||||| ||||||| | || ||||||||||| ||||| || ||||||| ||||||||| Sbjct: 417 ttctcgctgaacagtcttgcggcttctgagtttgcaggggagttcgggtctggatcacac 476 Query: 236 agcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgattc 295 ||||| ||||| || || || | || ||||| ||||||||||| || |||||||| ||| Sbjct: 477 agcagggactgaatagaagtcaagattgcagcaacatcatatataggactccactggttc 536 Query: 296 tgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaa 355 ||||||||||| ||||| ||||||||||||||||| ||||| || |||||||||| ||| Sbjct: 537 tgtaggatatccaagcagatgcttccatcagcatatatgtttggatgaaacatcctagag 596 Query: 356 ataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagctta 415 | |||||||| ||||||||||| || || || ||||| | ||||| | || ||||| Sbjct: 597 acgaaccgaacagttggtggcttgtttgggtaatcttctgtaaactgcaaggtaagcttg 656 Query: 416 aacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcatt 475 ||||| ||||||||||| || ||||||| || || || || || || ||||| ||||| Sbjct: 657 aacgtgcctccgtcccaaggcgtatcatccggcccgaatatgacggcgttccagagcatg 716 Query: 476 atgttgttgtcctgcggcgc 495 ||||||||||| |||||||| Sbjct: 717 atgttgttgtcgtgcggcgc 736
>gb|BT013884.1| Lycopersicon esculentum clone 132865R, mRNA sequence Length = 794 Score = 210 bits (106), Expect = 3e-51 Identities = 304/370 (82%) Strand = Plus / Minus Query: 117 agtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgcttat 176 |||| ||||||||||||||||| |||||||| ||||| || | ||||||||| ||||| | Sbjct: 517 agtccgccgtccagctctgctcaacaatctcacgcaccttcctgttgtactcacgcttgt 458 Query: 177 tctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacaca 236 |||||||||||||||| || |||||||| ||||||||||| || ||||| |||||||| | Sbjct: 457 tctcactgaacatgcgagctgcttctgaattagcaggcgagtttgggtttggatcacaaa 398 Query: 237 gcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgattct 296 ||| |||||||| || || ||||||||||| || |||||||| || ||||||||||| | Sbjct: 397 gcaaagactggattgaagtgagtatagcagcaacgtcatatataggactccactgatttt 338 Query: 297 gtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaaa 356 | || || |||||||| || || ||||| |||||||| || || || ||||||| || | Sbjct: 337 gcagtatgtctaagcaaatactcccatcggcataaatattcggatggaacatcctggata 278 Query: 357 taaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagcttaa 416 ||| ||||| ||||| ||||| || || || || || || || || |||||||||| Sbjct: 277 caaatcgaaccgttggaggcttgttggggtaatcctccgaaaattgaagtgtcagcttaa 218 Query: 417 acgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcatta 476 |||||||||| ||||| || | |||||||| || || || ||||||||||| ||||||| Sbjct: 217 acgtacctccatcccaaggtgtgtcatcaggaccgaatataacagcattccaaagcatta 158 Query: 477 tgttgttgtc 486 | |||||||| Sbjct: 157 tattgttgtc 148
>dbj|AB026056.1| Nicotiana tabacum Ntubc2 mRNA for ubiquitin-conjugating enzyme (E2), complete cds Length = 784 Score = 210 bits (106), Expect = 3e-51 Identities = 304/370 (82%) Strand = Plus / Minus Query: 117 agtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgcttat 176 ||||||| ||||||||||| || |||||||| ||||| || | |||||| || ||||| | Sbjct: 541 agtctgctgtccagctctgttcaacaatctcgcgcaccttcctgttgtattcgcgcttgt 482 Query: 177 tctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacaca 236 |||||||||||||||| || |||||||| ||||| ||||| || || || |||||||| | Sbjct: 481 tctcactgaacatgcgtgctgcttctgaattagctggcgagttaggatttggatcacaga 422 Query: 237 gcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgattct 296 ||| |||||||| || || ||||||||||||||||||||||| || ||||||||||| | Sbjct: 421 gcaaagactggattgaagtcagtatagcagctacatcatatatgggactccactgatttt 362 Query: 297 gtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaaa 356 | | ||| || ||||| || ||||||||||| ||||| || ||||| ||||| | |||| Sbjct: 361 gcaagatgtccaagcaaatacttccatcagcgtaaatatttgggtggaacattctggaaa 302 Query: 357 taaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagcttaa 416 |||| || || |||||||| || || ||||| || || ||| || || |||||||||| Sbjct: 301 taaatcgcacagttggtggtttgtttggataatcctctgagaattgaagtgtcagcttaa 242 Query: 417 acgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcatta 476 | || ||||| ||||| || |||||||||| || ||||| || |||||||| ||||||| Sbjct: 241 atgtgcctccatcccagggagtatcatcaggaccgaaaatgactgcattccatagcatta 182 Query: 477 tgttgttgtc 486 | |||||||| Sbjct: 181 tattgttgtc 172
>gb|BT017249.1| Zea mays clone EL01N0307D01.c mRNA sequence Length = 863 Score = 196 bits (99), Expect = 5e-47 Identities = 303/371 (81%) Strand = Plus / Minus Query: 125 gtccagctctgctcgacaatctcccgcactttgcggttgtactctcgcttattctcactg 184 |||||||||||||| |||| ||| || ||||||||||||||||| ||||| ||||| ||| Sbjct: 622 gtccagctctgctccacaacctcgcgaactttgcggttgtactcgcgcttgttctcgctg 563 Query: 185 aacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacacagcagcgac 244 ||||| | || ||||| ||||| ||||| ||||| ||||| || ||||||||||| ||| Sbjct: 562 aacattctcgctgcttcagagttggcaggagaatttgggtttgggtcacacagcagggac 503 Query: 245 tggatggatgtaagtatagcagctacatcatatattgggctccactgattctgtaggata 304 || || || || | ||| || || ||||| ||||| || |||||||| || |||||||| Sbjct: 502 tgaatagaggtcaatattgccgcaacatcgtatataggactccactggttttgtaggatg 443 Query: 305 tctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaaataaaccga 364 || || || ||||||||||| ||||||||||| ||||||||||||| |||| ||||||| Sbjct: 442 tccaaacagatgcttccatccgcataaatgtttgggtgaaacatcctcgaaacaaaccga 383 Query: 365 actgttggtggcttattaggatattcttcattgaactggagagtcagcttaaacgtacct 424 || || || || || || || || ||||| | || || ||||||||||| ||||| ||| Sbjct: 382 acagtcggaggtttgttggggtaatcttctgtaaattgcagagtcagcttgaacgtgcct 323 Query: 425 ccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcattatgttgttg 484 ||||||||||| | ||||| || || || || || || ||||| ||||| ||||||||| Sbjct: 322 ccgtcccacggcgtgtcatccggcccgaatatgacggcgttccagagcatgatgttgttg 263 Query: 485 tcctgcggcgc 495 || |||||||| Sbjct: 262 tcgtgcggcgc 252
>gb|AF262934.1|AF262934 Avicennia marina ubiquitin conjugating protein (UBC) mRNA, complete cds Length = 850 Score = 194 bits (98), Expect = 2e-46 Identities = 296/362 (81%) Strand = Plus / Minus Query: 125 gtccagctctgctcgacaatctcccgcactttgcggttgtactctcgcttattctcactg 184 |||||||| ||||| ||||| |||| ||| |||| ||||| || ||||| ||||||||| Sbjct: 508 gtccagctttgctccacaatttcccttactctgcgattgtattcgcgcttgttctcactg 449 Query: 185 aacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacacagcagcgac 244 ||||| || |||||||| || || ||||| ||||| || || || ||||||| ||| ||| Sbjct: 448 aacatccgagcagcttcagaatttgcaggagaatttggattcgggtcacacaacagtgac 389 Query: 245 tggatggatgtaagtatagcagctacatcatatattgggctccactgattctgtaggata 304 ||||| || |||||||| || || | |||||||| || ||||| || || || ||||| Sbjct: 388 tggatagacgtaagtatggctgcaatgtcatatataggactccattggttttgaaggatg 329 Query: 305 tctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaaataaaccga 364 || ||||||||||||||||| |||||||| || ||||||||||| | ||||| ||| ||| Sbjct: 328 tccaagcatatgcttccatccgcataaatatttgggtgaaacattctagaaacaaatcga 269 Query: 365 actgttggtggcttattaggatattcttcattgaactggagagtcagcttaaacgtacct 424 ||||||||||| || || ||||| ||||| ||||||| || ||||| || || |||||| Sbjct: 268 actgttggtggtttgtttggataatcttctgtgaactgaagggtcagtttgaatgtacct 209 Query: 425 ccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcattatgttgttg 484 || ||||| || |||||||||| ||||| || || |||||||| ||||| ||||| ||| Sbjct: 208 ccatcccatggcgtatcatcaggaccaaatataactgcattccagagcataatgttattg 149 Query: 485 tc 486 || Sbjct: 148 tc 147
>emb|BX814055.1|CNS0ADOD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB54ZE09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 804 Score = 192 bits (97), Expect = 8e-46 Identities = 298/365 (81%) Strand = Plus / Minus Query: 125 gtccagctctgctcgacaatctcccgcactttgcggttgtactctcgcttattctcactg 184 |||||||| ||||| |||| || |||||| | | || |||||| ||||| | || ||| Sbjct: 600 gtccagctttgctcaacaacatcacgcactctcctgtggtactcgcgcttgctttcgctg 541 Query: 185 aacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacacagcagcgac 244 |||| || |||||||| ||||| ||||| |||||||| | ||| | ||| |||| ||| Sbjct: 540 tacatccgagcagcttccgagtttgcaggagaattcggataagggtaacagagcaaggac 481 Query: 245 tggatggatgtaagtatagcagctacatcatatattgggctccactgattctgtaggata 304 |||||||| ||||||||||||||||||||||| ||||| |||||||| || ||||| || Sbjct: 480 tggatggaggtaagtatagcagctacatcatagattggactccactggttttgtagaatg 421 Query: 305 tctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaaataaaccga 364 || ||||| || || ||||| |||||||| ||||| ||||||||||| || | ||||||| Sbjct: 420 tccaagcagatactcccatctgcataaatattaggatgaaacatccgtgacacaaaccga 361 Query: 365 actgttggtggcttattaggatattcttcattgaactggagagtcagcttaaacgtacct 424 ||||||||||| ||||| ||||| |||||| |||||| || | || || || |||||| Sbjct: 360 actgttggtggtttattgggataatcttcagagaactgcagtgagagtttgaaagtacct 301 Query: 425 ccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcattatgttgttg 484 || ||||| || | |||||||| ||||| || | ||||||||| ||||| ||||||||| Sbjct: 300 ccatcccatggtgtgtcatcaggcccaaatatgagagcattccagagcataatgttgttg 241 Query: 485 tcctg 489 ||||| Sbjct: 240 tcctg 236
>ref|NM_126331.2| Arabidopsis thaliana ATUBC2; ubiquitin conjugating enzyme AT2G02760 (ATUBC2) mRNA, complete cds Length = 860 Score = 188 bits (95), Expect = 1e-44 Identities = 302/371 (81%) Strand = Plus / Minus Query: 116 tagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctta 175 ||||| || |||||||| || ||||||| ||| || ||| | | ||||||||| ||||| Sbjct: 637 tagtcggcagtccagctttgttcgacaacctcgcggactcttctgttgtactcgcgcttg 578 Query: 176 ttctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacac 235 | ||||||||||| || |||||||| || || ||||| |||||||| ||||||||||| Sbjct: 577 ctttcactgaacattcgtgcagcttccgaatttgcaggagaattcggattaggatcacat 518 Query: 236 agcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgattc 295 |||| ||||| ||||| || ||||||||||| ||||| |||||||| ||||| || || Sbjct: 517 agcaatgactgaatggaggttagtatagcagcgacatcgtatattggactccattggttt 458 Query: 296 tgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaa 355 || || || || |||||||| || ||||||||||||||||| || || |||||||| ||| Sbjct: 457 tggagaatgtccaagcatatactcccatcagcataaatgtttggatggaacatccgtgaa 398 Query: 356 ataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagctta 415 | |||||| ||||||||||| ||||| ||||| ||||| ||||| || | || || Sbjct: 397 acaaaccgcactgttggtggtttatttggataatcttccgaaaactgcagtgacaatttg 338 Query: 416 aacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcatt 475 || |||||||| ||||| ||| |||||||||| || || || ||||||||||||| ||| Sbjct: 337 aaagtacctccatcccaaggggtatcatcaggcccgaatataacagcattccacaacatg 278 Query: 476 atgttgttgtc 486 || |||||||| Sbjct: 277 atattgttgtc 267
>emb|Y13031.1|ATUBC2 A.thaliana mRNA for ubiquitin conjugating enzyme UBC2 Length = 824 Score = 188 bits (95), Expect = 1e-44 Identities = 302/371 (81%) Strand = Plus / Minus Query: 116 tagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctta 175 ||||| || |||||||| || ||||||| ||| || ||| | | ||||||||| ||||| Sbjct: 583 tagtcggcagtccagctttgttcgacaacctcgcggactcttctgttgtactcgcgcttg 524 Query: 176 ttctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacac 235 | ||||||||||| || |||||||| || || ||||| |||||||| ||||||||||| Sbjct: 523 ctttcactgaacattcgtgcagcttccgaatttgcaggagaattcggattaggatcacat 464 Query: 236 agcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgattc 295 |||| ||||| ||||| || ||||||||||| ||||| |||||||| ||||| || || Sbjct: 463 agcaatgactgaatggaggttagtatagcagcgacatcgtatattggactccattggttt 404 Query: 296 tgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaa 355 || || || || |||||||| || ||||||||||||||||| || || |||||||| ||| Sbjct: 403 tggagaatgtccaagcatatactcccatcagcataaatgtttggatggaacatccgtgaa 344 Query: 356 ataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagctta 415 | |||||| ||||||||||| ||||| ||||| ||||| ||||| || | || || Sbjct: 343 acaaaccgcactgttggtggtttatttggataatcttccgaaaactgcagtgacaatttg 284 Query: 416 aacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcatt 475 || |||||||| ||||| ||| |||||||||| || || || ||||||||||||| ||| Sbjct: 283 aaagtacctccatcccaaggggtatcatcaggcccgaatataacagcattccacaacatg 224 Query: 476 atgttgttgtc 486 || |||||||| Sbjct: 223 atattgttgtc 213
>gb|AY072479.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme E2 (At2g02760; T20F6.10) mRNA, complete cds Length = 538 Score = 188 bits (95), Expect = 1e-44 Identities = 302/371 (81%) Strand = Plus / Minus Query: 116 tagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctta 175 ||||| || |||||||| || ||||||| ||| || ||| | | ||||||||| ||||| Sbjct: 458 tagtcggcagtccagctttgttcgacaacctcgcggactcttctgttgtactcgcgcttg 399 Query: 176 ttctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacac 235 | ||||||||||| || |||||||| || || ||||| |||||||| ||||||||||| Sbjct: 398 ctttcactgaacattcgtgcagcttccgaatttgcaggagaattcggattaggatcacat 339 Query: 236 agcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgattc 295 |||| ||||| ||||| || ||||||||||| ||||| |||||||| ||||| || || Sbjct: 338 agcaatgactgaatggaggttagtatagcagcgacatcgtatattggactccattggttt 279 Query: 296 tgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaa 355 || || || || |||||||| || ||||||||||||||||| || || |||||||| ||| Sbjct: 278 tggagaatgtccaagcatatactcccatcagcataaatgtttggatggaacatccgtgaa 219 Query: 356 ataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagctta 415 | |||||| ||||||||||| ||||| ||||| ||||| ||||| || | || || Sbjct: 218 acaaaccgcactgttggtggtttatttggataatcttccgaaaactgcagtgacaatttg 159 Query: 416 aacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcatt 475 || |||||||| ||||| ||| |||||||||| || || || ||||||||||||| ||| Sbjct: 158 aaagtacctccatcccaaggggtatcatcaggcccgaatataacagcattccacaacatg 99 Query: 476 atgttgttgtc 486 || |||||||| Sbjct: 98 atattgttgtc 88
>gb|AF370558.1|AF370558 Arabidopsis thaliana putative ubiquitin-conjugating enzyme E2 (At2g02760; T20F6.10) mRNA, complete cds Length = 830 Score = 188 bits (95), Expect = 1e-44 Identities = 302/371 (81%) Strand = Plus / Minus Query: 116 tagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctta 175 ||||| || |||||||| || ||||||| ||| || ||| | | ||||||||| ||||| Sbjct: 607 tagtcggcagtccagctttgttcgacaacctcgcggactcttctgttgtactcgcgcttg 548 Query: 176 ttctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacac 235 | ||||||||||| || |||||||| || || ||||| |||||||| ||||||||||| Sbjct: 547 ctttcactgaacattcgtgcagcttccgaatttgcaggagaattcggattaggatcacat 488 Query: 236 agcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgattc 295 |||| ||||| ||||| || ||||||||||| ||||| |||||||| ||||| || || Sbjct: 487 agcaatgactgaatggaggttagtatagcagcgacatcgtatattggactccattggttt 428 Query: 296 tgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaa 355 || || || || |||||||| || ||||||||||||||||| || || |||||||| ||| Sbjct: 427 tggagaatgtccaagcatatactcccatcagcataaatgtttggatggaacatccgtgaa 368 Query: 356 ataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagctta 415 | |||||| ||||||||||| ||||| ||||| ||||| ||||| || | || || Sbjct: 367 acaaaccgcactgttggtggtttatttggataatcttccgaaaactgcagtgacaatttg 308 Query: 416 aacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcatt 475 || |||||||| ||||| ||| |||||||||| || || || ||||||||||||| ||| Sbjct: 307 aaagtacctccatcccaaggggtatcatcaggcccgaatataacagcattccacaacatg 248 Query: 476 atgttgttgtc 486 || |||||||| Sbjct: 247 atattgttgtc 237
>gb|DQ027017.1| Arabidopsis thaliana ubiquitinating enzyme (At2g02760) mRNA, complete cds Length = 459 Score = 188 bits (95), Expect = 1e-44 Identities = 302/371 (81%) Strand = Plus / Minus Query: 116 tagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctta 175 ||||| || |||||||| || ||||||| ||| || ||| | | ||||||||| ||||| Sbjct: 458 tagtcggcagtccagctttgttcgacaacctcgcggactcttctgttgtactcgcgcttg 399 Query: 176 ttctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacac 235 | ||||||||||| || |||||||| || || ||||| |||||||| ||||||||||| Sbjct: 398 ctttcactgaacattcgtgcagcttccgaatttgcaggagaattcggattaggatcacat 339 Query: 236 agcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgattc 295 |||| ||||| ||||| || ||||||||||| ||||| |||||||| ||||| || || Sbjct: 338 agcaatgactgaatggaggttagtatagcagcgacatcgtatattggactccattggttt 279 Query: 296 tgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaa 355 || || || || |||||||| || ||||||||||||||||| || || |||||||| ||| Sbjct: 278 tggagaatgtccaagcatatactcccatcagcataaatgtttggatggaacatccgtgaa 219 Query: 356 ataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagctta 415 | |||||| ||||||||||| ||||| ||||| ||||| ||||| || | || || Sbjct: 218 acaaaccgcactgttggtggtttatttggataatcttccgaaaactgcagtgacaatttg 159 Query: 416 aacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcatt 475 || |||||||| ||||| ||| |||||||||| || || || ||||||||||||| ||| Sbjct: 158 aaagtacctccatcccaaggggtatcatcaggcccgaatataacagcattccacaacatg 99 Query: 476 atgttgttgtc 486 || |||||||| Sbjct: 98 atattgttgtc 88
>gb|AY389584.1| Hyacinthus orientalis ubiquitin-conjugating enzyme (UBC) mRNA, partial cds Length = 691 Score = 182 bits (92), Expect = 7e-43 Identities = 311/384 (80%) Strand = Plus / Minus Query: 115 ttagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctt 174 |||||| |||||||||||||| || || ||||| || || | ||||||||||| ||||| Sbjct: 449 ttagtcagccgtccagctctgttccactatctctcggacccttcggttgtactcacgctt 390 Query: 175 attctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcaca 234 ||||| |||||||| || ||||| || ||||| || || || || ||||| || ||||| Sbjct: 389 gttctcgctgaacatccgagcagcctcagagttggccggggagtttgggtttgggtcaca 330 Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 || || ||||| || ||||| |||||||| || |||||||| || || ||||| || || Sbjct: 329 gaggagagactgaatagatgtcagtatagctgcaacatcataaatgggactccattggtt 270 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||||| ||||| | ||||||||| ||||| ||||| ||||| || |||||||| | || Sbjct: 269 ctgtaaaatatccaggcatatgctcccatctgcatatatgtttggatgaaacattcttga 210 Query: 355 aataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagctt 414 | |||||||||||||||||||||||||||||| || || |||| || | |||| || Sbjct: 209 gacaaaccgaactgttggtggcttattaggataatcctcggtgaattgcaatgtcaattt 150 Query: 415 aaacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcat 474 ||| |||||||| ||||| || |||||||||| ||||| ||||| || ||||| ||||| Sbjct: 149 aaaggtacctccatcccatggagtatcatcaggcccaaagatcactgcgttccagagcat 90 Query: 475 tatgttgttgtcctgcggcgcccc 498 |||||||||||||| || ||||| Sbjct: 89 gatgttgttgtcctgaggggcccc 66
>emb|AJ879070.1| Capsicum chinense mRNA for ubiquitin-conjugating enzyme Length = 957 Score = 178 bits (90), Expect = 1e-41 Identities = 294/362 (81%) Strand = Plus / Minus Query: 125 gtccagctctgctcgacaatctcccgcactttgcggttgtactctcgcttattctcactg 184 |||||||||||||| |||||||| ||||| || | ||||||||| ||||| ||||| || Sbjct: 663 gtccagctctgctcaacaatctcacgcaccttcctgttgtactcgcgcttgttctcgcta 604 Query: 185 aacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacacagcagcgac 244 |||||||| || |||||||| ||||| ||||| || ||||| ||||| || |||| ||| Sbjct: 603 aacatgcgcgctgcttctgaattagctggcgagtttgggtttggatcgcagagcaaagac 544 Query: 245 tggatggatgtaagtatagcagctacatcatatattgggctccactgattctgtaggata 304 ||||| || || |||||||| || |||||||| || || ||||||||||| || || || Sbjct: 543 tggattgaagtgagtatagccgcaacatcataaataggactccactgattttgcagtatg 484 Query: 305 tctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaaataaaccga 364 || ||||| || || ||||| |||||||| || || || ||||||| ||||||||||| Sbjct: 483 tccaagcaaatactcccatcggcataaatatttggatggaacatcctggaaataaaccgc 424 Query: 365 actgttggtggcttattaggatattcttcattgaactggagagtcagcttaaacgtacct 424 || ||||| ||||| || || || || || || || || |||||||||||||||||| Sbjct: 423 accgttggaggcttgttggggtaatcctccgaaaattgaagtgtcagcttaaacgtacct 364 Query: 425 ccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcattatgttgttg 484 || ||||| || | |||||||| |||||||| ||||||||||| ||||| || |||||| Sbjct: 363 ccatcccaaggcgtgtcatcaggaccaaaaataacagcattccaaagcataatattgttg 304 Query: 485 tc 486 || Sbjct: 303 tc 302
>gb|L06967.1|ALFUBIQUIT Medicago sativa ubiquitin carrier protein mRNA, complete cds Length = 910 Score = 157 bits (79), Expect = 4e-35 Identities = 301/375 (80%) Strand = Plus / Minus Query: 115 ttagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctt 174 |||||| || ||||| |||||||| |||| ||||||||| | || |||||||| ||||| Sbjct: 583 ttagtcagctgtccaactctgctccacaacttcccgcactctacgattgtactcacgctt 524 Query: 175 attctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcaca 234 |||||||||||||| || || ||||| ||||| ||||| ||||| ||||| |||||||| Sbjct: 523 gttctcactgaacattcgagccgcttcagagtttgcaggagaatttgggttgggatcaca 464 Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 |||| |||||||| || || || || ||||| ||||||||||| || ||||||||||| Sbjct: 463 aagcaatgactggatagaagtgagaatcgcagcaacatcatatataggactccactgatt 404 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 || | ||||| | || || |||||||| ||||||||||| || |||||||| || || Sbjct: 403 ttgcaatatatccagacaaatacttccatctgcataaatgtttggatgaaacattcggga 344 Query: 355 aataaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagctt 414 | ||| || || || |||||||| || ||||| || || || || || ||| ||| Sbjct: 343 gacaaatcgtacagtgggtggcttgttcggataatcctcggaaaattgaaggctcaactt 284 Query: 415 aaacgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcat 474 |||||| ||||| ||||| || |||||||||| ||||| || ||||||||||||||||| Sbjct: 283 aaacgtgcctccatcccatggagtatcatcaggaccaaatataacagcattccacagcat 224 Query: 475 tatgttgttgtcctg 489 || ||||| ||||| Sbjct: 223 gatattgttatcctg 209
>gb|AC135431.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B12, complete sequence Length = 187523 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Minus Query: 244 ctggatggatgtaagtatagcagctacatcatatattgggctccactgattctgtaggat 303 |||||||||||| ||||||||||||||||||||||| ||||||||||| || ||||| || Sbjct: 618 ctggatggatgtgagtatagcagctacatcatatatggggctccactggttttgtagtat 559 Query: 304 atctaagcatatgcttccatcagcataaa 332 ||||||||||||||| ||||||||||||| Sbjct: 558 atctaagcatatgctcccatcagcataaa 530 Score = 111 bits (56), Expect = 2e-21 Identities = 107/124 (86%) Strand = Plus / Minus Query: 125 gtccagctctgctcgacaatctcccgcactttgcggttgtactctcgcttattctcactg 184 |||||||||||||| || ||||| || ||||| |||||||| || ||||| ||||||||| Sbjct: 1535 gtccagctctgctccactatctcacgaacttttcggttgtattcccgcttgttctcactg 1476 Query: 185 aacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacacagcagcgac 244 || | |||||||||||| ||||| ||||| ||||| ||||| ||||| || ||||||||| Sbjct: 1475 aataggcgggcagcttcagagttggcaggtgaatttgggtttggatcgcaaagcagcgac 1416 Query: 245 tgga 248 |||| Sbjct: 1415 tgga 1412
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Minus Query: 244 ctggatggatgtaagtatagcagctacatcatatattgggctccactgattctgtaggat 303 |||||||||||| ||||||||||||||||||||||| ||||||||||| || ||||| || Sbjct: 4906033 ctggatggatgtgagtatagcagctacatcatatatggggctccactggttttgtagtat 4905974 Query: 304 atctaagcatatgcttccatcagcataaa 332 ||||||||||||||| ||||||||||||| Sbjct: 4905973 atctaagcatatgctcccatcagcataaa 4905945 Score = 111 bits (56), Expect = 2e-21 Identities = 107/124 (86%) Strand = Plus / Minus Query: 125 gtccagctctgctcgacaatctcccgcactttgcggttgtactctcgcttattctcactg 184 |||||||||||||| || ||||| || ||||| |||||||| || ||||| ||||||||| Sbjct: 4906950 gtccagctctgctccactatctcacgaacttttcggttgtattcccgcttgttctcactg 4906891 Query: 185 aacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacacagcagcgac 244 || | |||||||||||| ||||| ||||| ||||| ||||| ||||| || ||||||||| Sbjct: 4906890 aataggcgggcagcttcagagttggcaggtgaatttgggtttggatcgcaaagcagcgac 4906831 Query: 245 tgga 248 |||| Sbjct: 4906830 tgga 4906827 Score = 87.7 bits (44), Expect = 3e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 333 tgttagggtgaaacatccgagaaataaaccgaactgttggtggcttattaggatattctt 392 ||||||| |||||||||||||||| ||| || ||||| |||||||| |||||||| |||| Sbjct: 4903979 tgttaggatgaaacatccgagaaacaaatcgcactgtaggtggcttgttaggataatctt 4903920 Query: 393 cattgaactggagagtcagcttaaacgtacct 424 || | ||||| || |||||||| ||||||||| Sbjct: 4903919 cagtaaactgaagtgtcagcttgaacgtacct 4903888 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 449 ccaaaaatcacagcattccacagcattatgttgttgtcctgcggcgcccc 498 |||||||| ||||||||||| |||||||| ||||||||||| || ||||| Sbjct: 4901786 ccaaaaattacagcattccaaagcattatattgttgtcctgtggggcccc 4901737
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Minus Query: 244 ctggatggatgtaagtatagcagctacatcatatattgggctccactgattctgtaggat 303 |||||||||||| ||||||||||||||||||||||| ||||||||||| || ||||| || Sbjct: 178441 ctggatggatgtgagtatagcagctacatcatatatggggctccactggttttgtagtat 178382 Query: 304 atctaagcatatgcttccatcagcataaa 332 ||||||||||||||| ||||||||||||| Sbjct: 178381 atctaagcatatgctcccatcagcataaa 178353 Score = 111 bits (56), Expect = 2e-21 Identities = 107/124 (86%) Strand = Plus / Minus Query: 125 gtccagctctgctcgacaatctcccgcactttgcggttgtactctcgcttattctcactg 184 |||||||||||||| || ||||| || ||||| |||||||| || ||||| ||||||||| Sbjct: 179358 gtccagctctgctccactatctcacgaacttttcggttgtattcccgcttgttctcactg 179299 Query: 185 aacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacacagcagcgac 244 || | |||||||||||| ||||| ||||| ||||| ||||| ||||| || ||||||||| Sbjct: 179298 aataggcgggcagcttcagagttggcaggtgaatttgggtttggatcgcaaagcagcgac 179239 Query: 245 tgga 248 |||| Sbjct: 179238 tgga 179235 Score = 87.7 bits (44), Expect = 3e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 333 tgttagggtgaaacatccgagaaataaaccgaactgttggtggcttattaggatattctt 392 ||||||| |||||||||||||||| ||| || ||||| |||||||| |||||||| |||| Sbjct: 176387 tgttaggatgaaacatccgagaaacaaatcgcactgtaggtggcttgttaggataatctt 176328 Query: 393 cattgaactggagagtcagcttaaacgtacct 424 || | ||||| || |||||||| ||||||||| Sbjct: 176327 cagtaaactgaagtgtcagcttgaacgtacct 176296 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 449 ccaaaaatcacagcattccacagcattatgttgttgtcctgcggcgcccc 498 |||||||| ||||||||||| |||||||| ||||||||||| || ||||| Sbjct: 174194 ccaaaaattacagcattccaaagcattatattgttgtcctgtggggcccc 174145
>gb|DQ200366.1| Solanum tuberosum clone 055E08 ubiquitin-conjugating enzyme-like protein mRNA, complete cds Length = 807 Score = 115 bits (58), Expect = 1e-22 Identities = 292/370 (78%) Strand = Plus / Minus Query: 117 agtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgcttat 176 ||||||| |||||||| ||||| || || || ||||| || | |||||| || ||||| | Sbjct: 532 agtctgctgtccagctttgctcaactatttcacgcaccttcctgttgtagtcgcgcttgt 473 Query: 177 tctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacaca 236 |||| || || | ||| || |||||||| ||||| |||||||| ||||| ||||||| | Sbjct: 472 tctcgctaaataggcgtgctgcttctgaattagctggcgaattggggtttggatcactga 413 Query: 237 gcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgattct 296 | | ||||| || || |||||||||||||||||||||||||| || ||||||||||| | Sbjct: 412 gtaaagactgtattgaagtaagtatagcagctacatcatatataggactccactgatttt 353 Query: 297 gtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaaa 356 | | ||| || || || || ||||||||||||||||| || || || ||||| | || | Sbjct: 352 gcaagatgtccaaacaaatacttccatcagcataaatatttggatggaacattctggaga 293 Query: 357 taaaccgaactgttggtggcttattaggatattcttcattgaactggagagtcagcttaa 416 ||| | ||| |||| ||||| |||||||| || || || || || |||| ||||| Sbjct: 292 caaagtgtacttttggcggcttgttaggataatcctctgaaaattgaagtgtcatcttaa 233 Query: 417 acgtacctccgtcccacgggctatcatcagggccaaaaatcacagcattccacagcatta 476 |||||||||| ||||| | |||||||||| || || || ||||||||||| | ||||| Sbjct: 232 acgtacctccatcccaggcagtatcatcaggaccgaatataacagcattccataacatta 173 Query: 477 tgttgttgtc 486 | ||| |||| Sbjct: 172 tattgctgtc 163
>gb|BT017437.1| Zea mays clone EL01N0404C11.c mRNA sequence Length = 425 Score = 113 bits (57), Expect = 6e-22 Identities = 144/173 (83%) Strand = Plus / Minus Query: 125 gtccagctctgctcgacaatctcccgcactttgcggttgtactctcgcttattctcactg 184 |||||||||||||| || ||||| || ||||||||| ||||||| ||||| ||||| ||| Sbjct: 181 gtccagctctgctccacgatctcacggactttgcgggtgtactcccgcttgttctcgctg 122 Query: 185 aacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacacagcagcgac 244 |||| | || ||||||||||| ||||| || || ||||| |||||||||||||| ||| Sbjct: 121 aacagtcttgctgcttctgagtttgcaggggagtttgggtttggatcacacagcagggac 62 Query: 245 tggatggatgtaagtatagcagctacatcatatattgggctccactgattctg 297 ||||| || || | || ||||| ||||||||||| || |||||||| ||||| Sbjct: 61 tggatagaagttaaaattgcagcaacatcatatataggactccactggttctg 9
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 111 bits (56), Expect = 2e-21 Identities = 113/132 (85%) Strand = Plus / Minus Query: 115 ttagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctt 174 |||||| ||||||||||||||||| |||||||| || ||||||||||||||||| ||||| Sbjct: 117275 ttagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgctt 117216 Query: 175 attctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcaca 234 ||||| ||||||| | ||| ||||| ||||| ||||| || || ||||| |||||||| Sbjct: 117215 gttctcgctgaacagtctggctgcttcggagtttgcaggggagtttgggtttggatcaca 117156 Query: 235 cagcagcgactg 246 ||||| ||||| Sbjct: 117155 gagcagggactg 117144 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 263 gcagctacatcatatattgggctccactgattctgtaggatatctaagcatatgcttcca 322 ||||| ||||||||||| |||||||| ||||| ||||||||||| ||||| || |||||| Sbjct: 116655 gcagcaacatcatatatagggctccattgattttgtaggatatccaagcagatacttcca 116596 Query: 323 tcagcataaa 332 || ||||||| Sbjct: 116595 tctgcataaa 116586 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 464 ttccacagcattatgttgttgtcctgcggcgc 495 ||||| ||||| ||||||||||| |||||||| Sbjct: 112630 ttccagagcatgatgttgttgtcgtgcggcgc 112599
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 111 bits (56), Expect = 2e-21 Identities = 113/132 (85%) Strand = Plus / Plus Query: 115 ttagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctt 174 |||||| ||||||||||||||||| |||||||| || ||||||||||||||||| ||||| Sbjct: 32626632 ttagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgctt 32626691 Query: 175 attctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcaca 234 ||||| ||||||| | ||| ||||| ||||| ||||| || || ||||| |||||||| Sbjct: 32626692 gttctcgctgaacagtctggctgcttcggagtttgcaggggagtttgggtttggatcaca 32626751 Query: 235 cagcagcgactg 246 ||||| ||||| Sbjct: 32626752 gagcagggactg 32626763 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 263 gcagctacatcatatattgggctccactgattctgtaggatatctaagcatatgcttcca 322 ||||| ||||||||||| |||||||| ||||| ||||||||||| ||||| || |||||| Sbjct: 32627252 gcagcaacatcatatatagggctccattgattttgtaggatatccaagcagatacttcca 32627311 Query: 323 tcagcataaa 332 || ||||||| Sbjct: 32627312 tctgcataaa 32627321 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 464 ttccacagcattatgttgttgtcctgcggcgc 495 ||||| ||||| ||||||||||| |||||||| Sbjct: 32631277 ttccagagcatgatgttgttgtcgtgcggcgc 32631308
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 111 bits (56), Expect = 2e-21 Identities = 113/132 (85%) Strand = Plus / Plus Query: 115 ttagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctt 174 |||||| ||||||||||||||||| |||||||| || ||||||||||||||||| ||||| Sbjct: 32717142 ttagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgctt 32717201 Query: 175 attctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcaca 234 ||||| ||||||| | ||| ||||| ||||| ||||| || || ||||| |||||||| Sbjct: 32717202 gttctcgctgaacagtctggctgcttcggagtttgcaggggagtttgggtttggatcaca 32717261 Query: 235 cagcagcgactg 246 ||||| ||||| Sbjct: 32717262 gagcagggactg 32717273 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 263 gcagctacatcatatattgggctccactgattctgtaggatatctaagcatatgcttcca 322 ||||| ||||||||||| |||||||| ||||| ||||||||||| ||||| || |||||| Sbjct: 32717762 gcagcaacatcatatatagggctccattgattttgtaggatatccaagcagatacttcca 32717821 Query: 323 tcagcataaa 332 || ||||||| Sbjct: 32717822 tctgcataaa 32717831 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 464 ttccacagcattatgttgttgtcctgcggcgc 495 ||||| ||||| ||||||||||| |||||||| Sbjct: 32721787 ttccagagcatgatgttgttgtcgtgcggcgc 32721818
>ref|XM_469944.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3633 Score = 107 bits (54), Expect = 4e-20 Identities = 108/126 (85%) Strand = Plus / Plus Query: 115 ttagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctt 174 |||||| ||||||||||||||||| |||||||| || ||||||||||||||||| ||||| Sbjct: 3505 ttagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgctt 3564 Query: 175 attctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcaca 234 ||||| ||||||| | ||| ||||| ||||| ||||| || || ||||| |||||||| Sbjct: 3565 gttctcgctgaacagtctggctgcttcggagtttgcaggggagtttgggtttggatcaca 3624 Query: 235 cagcag 240 ||||| Sbjct: 3625 gagcag 3630
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 103 bits (52), Expect = 6e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 116 tagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctta 175 ||||| || |||||||||||||| || ||||| || || |||||||||||||||||||| Sbjct: 3621799 tagtcagctgtccagctctgctccacgatctcacgaaccttgcggttgtactctcgcttg 3621858 Query: 176 ttctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacac 235 |||||||| |||| | ||||||||||||||| || || || || ||||| ||||||||| Sbjct: 3621859 ttctcactaaacagtctggcagcttctgagtttgctggagagttggggtttggatcacac 3621918 Query: 236 agca 239 |||| Sbjct: 3621919 agca 3621922 Score = 83.8 bits (42), Expect = 5e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 263 gcagctacatcatatattgggctccactgattctgtaggatatctaagcatatgcttcca 322 ||||| ||||||||||| ||||||||||| |||||||| ||||| ||||| ||||||||| Sbjct: 3622591 gcagcaacatcatatatagggctccactggttctgtagaatatccaagcagatgcttcca 3622650 Query: 323 tcagcataaa 332 || ||||||| Sbjct: 3622651 tctgcataaa 3622660 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 464 ttccacagcattatgttgttgtcctgcggcgc 495 ||||| ||||| ||||||||||| |||||||| Sbjct: 3625772 ttccagagcatgatgttgttgtcgtgcggcgc 3625803
>dbj|AP003842.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1641_C04 Length = 134367 Score = 103 bits (52), Expect = 6e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 116 tagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctta 175 ||||| || |||||||||||||| || ||||| || || |||||||||||||||||||| Sbjct: 91116 tagtcagctgtccagctctgctccacgatctcacgaaccttgcggttgtactctcgcttg 91175 Query: 176 ttctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacac 235 |||||||| |||| | ||||||||||||||| || || || || ||||| ||||||||| Sbjct: 91176 ttctcactaaacagtctggcagcttctgagtttgctggagagttggggtttggatcacac 91235 Query: 236 agca 239 |||| Sbjct: 91236 agca 91239 Score = 83.8 bits (42), Expect = 5e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 263 gcagctacatcatatattgggctccactgattctgtaggatatctaagcatatgcttcca 322 ||||| ||||||||||| ||||||||||| |||||||| ||||| ||||| ||||||||| Sbjct: 91908 gcagcaacatcatatatagggctccactggttctgtagaatatccaagcagatgcttcca 91967 Query: 323 tcagcataaa 332 || ||||||| Sbjct: 91968 tctgcataaa 91977 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 464 ttccacagcattatgttgttgtcctgcggcgc 495 ||||| ||||| ||||||||||| |||||||| Sbjct: 95089 ttccagagcatgatgttgttgtcgtgcggcgc 95120
>dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0039H02 Length = 169162 Score = 103 bits (52), Expect = 6e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 116 tagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctta 175 ||||| || |||||||||||||| || ||||| || || |||||||||||||||||||| Sbjct: 159749 tagtcagctgtccagctctgctccacgatctcacgaaccttgcggttgtactctcgcttg 159808 Query: 176 ttctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacac 235 |||||||| |||| | ||||||||||||||| || || || || ||||| ||||||||| Sbjct: 159809 ttctcactaaacagtctggcagcttctgagtttgctggagagttggggtttggatcacac 159868 Query: 236 agca 239 |||| Sbjct: 159869 agca 159872 Score = 83.8 bits (42), Expect = 5e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 263 gcagctacatcatatattgggctccactgattctgtaggatatctaagcatatgcttcca 322 ||||| ||||||||||| ||||||||||| |||||||| ||||| ||||| ||||||||| Sbjct: 160541 gcagcaacatcatatatagggctccactggttctgtagaatatccaagcagatgcttcca 160600 Query: 323 tcagcataaa 332 || ||||||| Sbjct: 160601 tctgcataaa 160610 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 464 ttccacagcattatgttgttgtcctgcggcgc 495 ||||| ||||| ||||||||||| |||||||| Sbjct: 163722 ttccagagcatgatgttgttgtcgtgcggcgc 163753
>dbj|AP004950.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT42E10, TM0123, complete sequence Length = 79601 Score = 97.6 bits (49), Expect = 3e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 115 ttagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctt 174 ||||||||| ||||| |||||||| ||||| |||| |||| ||||||||||||| ||||| Sbjct: 11166 ttagtctgctgtccaactctgctccacaatttccctcactctgcggttgtactcacgctt 11225 Query: 175 attctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcaca 234 |||||||| ||||| || || ||||| ||||| ||||| || || ||||| |||||||| Sbjct: 11226 gttctcactaaacattcgagctgcttcggagtttgcaggagagtttgggttgggatcaca 11285 Query: 235 cagca 239 |||| Sbjct: 11286 aagca 11290 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 244 ctggatggatgtaagtatagcagctacatcatatattgggctccactgattctgtaggat 303 |||||| ||||| ||||||||||||||||||||||| || ||||||||||| |||| || Sbjct: 15376 ctggatagatgtgagtatagcagctacatcatatataggactccactgattttgtaatat 15435 Query: 304 atctaagcatatgcttccatc 324 ||| || || || |||||||| Sbjct: 15436 atccaaacaaatacttccatc 15456 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 449 ccaaaaatcacagcattccacagcattatgttgttgtcctg 489 ||||| || ||||||||||||| ||| |||||||| ||||| Sbjct: 16684 ccaaatatgacagcattccacaacatgatgttgttatcctg 16724
>ref|NM_125648.3| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT5G62540 mRNA, complete cds Length = 877 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 281 gggctccactgattctgtaggatatctaagcatatgcttccatcagcataaatgttaggg 340 ||||||||||| || || | |||||| ||||| ||||||||||||||||||||||| || Sbjct: 563 gggctccactggttttgcaagatatccaagcaaatgcttccatcagcataaatgtttgga 504 Query: 341 tgaaacatccgagaaataaaccgaac 366 ||||||||||| |||| ||||||||| Sbjct: 503 tgaaacatccgtgaaacaaaccgaac 478
>gb|AY143805.1| Arabidopsis thaliana At5g62540/K19B1_15 mRNA, complete cds Length = 441 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 281 gggctccactgattctgtaggatatctaagcatatgcttccatcagcataaatgttaggg 340 ||||||||||| || || | |||||| ||||| ||||||||||||||||||||||| || Sbjct: 293 gggctccactggttttgcaagatatccaagcaaatgcttccatcagcataaatgtttgga 234 Query: 341 tgaaacatccgagaaataaaccgaac 366 ||||||||||| |||| ||||||||| Sbjct: 233 tgaaacatccgtgaaacaaaccgaac 208
>gb|AY048267.1| Arabidopsis thaliana AT5g62540/K19B1_15 mRNA, complete cds Length = 819 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 281 gggctccactgattctgtaggatatctaagcatatgcttccatcagcataaatgttaggg 340 ||||||||||| || || | |||||| ||||| ||||||||||||||||||||||| || Sbjct: 563 gggctccactggttttgcaagatatccaagcaaatgcttccatcagcataaatgtttgga 504 Query: 341 tgaaacatccgagaaataaaccgaac 366 ||||||||||| |||| ||||||||| Sbjct: 503 tgaaacatccgtgaaacaaaccgaac 478
>gb|AY039851.1| Arabidopsis thaliana AT5g62540/K19B1_15 mRNA, complete cds Length = 716 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 281 gggctccactgattctgtaggatatctaagcatatgcttccatcagcataaatgttaggg 340 ||||||||||| || || | |||||| ||||| ||||||||||||||||||||||| || Sbjct: 407 gggctccactggttttgcaagatatccaagcaaatgcttccatcagcataaatgtttgga 348 Query: 341 tgaaacatccgagaaataaaccgaac 366 ||||||||||| |||| ||||||||| Sbjct: 347 tgaaacatccgtgaaacaaaccgaac 322
>emb|BX833570.1|CNS09ZB5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL62ZG05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 781 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 281 gggctccactgattctgtaggatatctaagcatatgcttccatcagcataaatgttaggg 340 ||||||||||| || || | |||||| ||||| ||||||||||||||||||||||| || Sbjct: 480 gggctccactggttttgcaagatatccaagcaaatgcttccatcagcataaatgtttgga 421 Query: 341 tgaaacatccgagaaataaaccgaac 366 ||||||||||| |||| ||||||||| Sbjct: 420 tgaaacatccgtgaaacaaaccgaac 395
>emb|BX832888.1|CNS09YZQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL1ZD01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 693 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 281 gggctccactgattctgtaggatatctaagcatatgcttccatcagcataaatgttaggg 340 ||||||||||| || || | |||||| ||||| ||||||||||||||||||||||| || Sbjct: 379 gggctccactggttttgcaagatatccaagcaaatgcttccatcagcataaatgtttgga 320 Query: 341 tgaaacatccgagaaataaaccgaac 366 ||||||||||| |||| ||||||||| Sbjct: 319 tgaaacatccgtgaaacaaaccgaac 294
>emb|BX833841.1|CNS09YNI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL7ZA01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 695 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 281 gggctccactgattctgtaggatatctaagcatatgcttccatcagcataaatgttaggg 340 ||||||||||| || || | |||||| ||||| ||||||||||||||||||||||| || Sbjct: 381 gggctccactggttttgcaagatatccaagcaaatgcttccatcagcataaatgtttgga 322 Query: 341 tgaaacatccgagaaataaaccgaac 366 ||||||||||| |||| ||||||||| Sbjct: 321 tgaaacatccgtgaaacaaaccgaac 296
>gb|AY085367.1| Arabidopsis thaliana clone 148141 mRNA, complete sequence Length = 682 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 281 gggctccactgattctgtaggatatctaagcatatgcttccatcagcataaatgttaggg 340 ||||||||||| || || | |||||| ||||| ||||||||||||||||||||||| || Sbjct: 405 gggctccactggttttgcaagatatccaagcaaatgcttccatcagcataaatgtttgga 346 Query: 341 tgaaacatccgagaaataaaccgaac 366 ||||||||||| |||| ||||||||| Sbjct: 345 tgaaacatccgtgaaacaaaccgaac 320
>gb|DQ027018.1| Arabidopsis thaliana ubiquitinating enzyme (At5g62540) mRNA, complete cds Length = 453 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 281 gggctccactgattctgtaggatatctaagcatatgcttccatcagcataaatgttaggg 340 ||||||||||| || || | |||||| ||||| ||||||||||||||||||||||| || Sbjct: 293 gggctccactggttttgcaagatatccaagcaaatgcttccatcagcataaatgtttgga 234 Query: 341 tgaaacatccgagaaataaaccgaac 366 ||||||||||| |||| ||||||||| Sbjct: 233 tgaaacatccgtgaaacaaaccgaac 208
>gb|AC122726.21| Medicago truncatula clone mth2-23o24, complete sequence Length = 130999 Score = 89.7 bits (45), Expect = 8e-15 Identities = 105/125 (84%) Strand = Plus / Minus Query: 115 ttagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctt 174 |||||| || ||||| |||||||| |||| ||||||||| | || |||||||| ||||| Sbjct: 100858 ttagtcagctgtccaactctgctccacaacttcccgcactcttcgattgtactcacgctt 100799 Query: 175 attctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcaca 234 |||||||||||||| || || ||||| ||||| ||||| ||||| ||||| |||||||| Sbjct: 100798 gttctcactgaacattcgagccgcttcagagtttgcaggagaatttgggttgggatcaca 100739 Query: 235 cagca 239 |||| Sbjct: 100738 aagca 100734 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 449 ccaaaaatcacagcattccacagcattatgttgttgtcctg 489 ||||| || ||||||||||||| ||| |||||||| ||||| Sbjct: 97193 ccaaatataacagcattccacaacatgatgttgttatcctg 97153
>gb|BC071066.1| Xenopus laevis MGC78891 protein, mRNA (cDNA clone MGC:78891 IMAGE:4174331), complete cds Length = 935 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 268 tacatcatatattgggctccactgattctgtaggatatctaagcatatgcttccatcagc 327 |||||||||| |||| ||||| ||||||| ||||||||||| |||||||| |||||||| Sbjct: 377 tacatcatatgttggactccagcgattctgaaggatatctaaacatatgctgccatcagc 318 Query: 328 ataaatgttagggtgaaacat 348 ||||| || ||||||||||| Sbjct: 317 ataaacatttgggtgaaacat 297
>ref|XM_517935.1| PREDICTED: Pan troglodytes similar to ubiquitin conjugating enzyme (LOC462065), mRNA Length = 765 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 |||||| ||||| || ||||| | |||| || |||||||||| |||| ||||| |||| Sbjct: 645 cagcagagactgaattgatgttaagatagaagatacatcatatgttggactccatcgatt 586 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||| ||||||||||| |||||||| ||||||||||| | || || |||||||| || Sbjct: 585 ctgaaggatatctaaacatatgctaccatcagcatacacatttggatgaaacattttgga 526 Query: 355 aataaaccgaactgttggtggcttattaggatattcttca 394 | ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 525 taaaaacctaacagttggtggtttatttggatattcttca 486
>ref|NM_003337.2| Homo sapiens ubiquitin-conjugating enzyme E2B (RAD6 homolog) (UBE2B), mRNA Length = 2631 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 |||||| ||||| || ||||| | |||| || |||||||||| |||| ||||| |||| Sbjct: 756 cagcagagactgaattgatgttaagatagaagatacatcatatgttggactccatcgatt 697 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||| ||||||||||| |||||||| ||||||||||| | || || |||||||| || Sbjct: 696 ctgaaggatatctaaacatatgctaccatcagcatacacatttggatgaaacattttgga 637 Query: 355 aataaaccgaactgttggtggcttattaggatattcttca 394 | ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 636 taaaaacctaacagttggtggtttatttggatattcttca 597
>gb|BC005979.1| Homo sapiens ubiquitin-conjugating enzyme E2B (RAD6 homolog), mRNA (cDNA clone MGC:14670 IMAGE:4105643), complete cds Length = 1355 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 |||||| ||||| || ||||| | |||| || |||||||||| |||| ||||| |||| Sbjct: 366 cagcagagactgaattgatgttaagatagaagatacatcatatgttggactccatcgatt 307 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||| ||||||||||| |||||||| ||||||||||| | || || |||||||| || Sbjct: 306 ctgaaggatatctaaacatatgctaccatcagcatacacatttggatgaaacattttgga 247 Query: 355 aataaaccgaactgttggtggcttattaggatattcttca 394 | ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 246 taaaaacctaacagttggtggtttatttggatattcttca 207
>gb|BT008091.1| Synthetic construct Homo sapiens ubiquitin-conjugating enzyme E2B (RAD6 homolog) mRNA, partial cds Length = 459 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 |||||| ||||| || ||||| | |||| || |||||||||| |||| ||||| |||| Sbjct: 339 cagcagagactgaattgatgttaagatagaagatacatcatatgttggactccatcgatt 280 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||| ||||||||||| |||||||| ||||||||||| | || || |||||||| || Sbjct: 279 ctgaaggatatctaaacatatgctaccatcagcatacacatttggatgaaacattttgga 220 Query: 355 aataaaccgaactgttggtggcttattaggatattcttca 394 | ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 219 taaaaacctaacagttggtggtttatttggatattcttca 180
>gb|BT007071.1| Homo sapiens ubiquitin-conjugating enzyme E2B (RAD6 homolog) mRNA, complete cds Length = 459 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 |||||| ||||| || ||||| | |||| || |||||||||| |||| ||||| |||| Sbjct: 339 cagcagagactgaattgatgttaagatagaagatacatcatatgttggactccatcgatt 280 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||| ||||||||||| |||||||| ||||||||||| | || || |||||||| || Sbjct: 279 ctgaaggatatctaaacatatgctaccatcagcatacacatttggatgaaacattttgga 220 Query: 355 aataaaccgaactgttggtggcttattaggatattcttca 394 | ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 219 taaaaacctaacagttggtggtttatttggatattcttca 180
>emb|CR625304.1| full-length cDNA clone CS0DF017YN04 of Fetal brain of Homo sapiens (human) Length = 781 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 |||||| ||||| || ||||| | |||| || |||||||||| |||| ||||| |||| Sbjct: 361 cagcagagactgaattgatgttaagatagaagatacatcatatgttggactccatcgatt 302 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||| ||||||||||| |||||||| ||||||||||| | || || |||||||| || Sbjct: 301 ctgaaggatatctaaacatatgctaccatcagcatacacatttggatgaaacattttgga 242 Query: 355 aataaaccgaactgttggtggcttattaggatattcttca 394 | ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 241 taaaaacctaacagttggtggtttatttggatattcttca 202
>emb|CR616089.1| full-length cDNA clone CS0DI023YO01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 938 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 |||||| ||||| || ||||| | |||| || |||||||||| |||| ||||| |||| Sbjct: 392 cagcagagactgaattgatgttaagatagaagatacatcatatgttggactccatcgatt 333 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||| ||||||||||| |||||||| ||||||||||| | || || |||||||| || Sbjct: 332 ctgaaggatatctaaacatatgctaccatcagcatacacatttggatgaaacattttgga 273 Query: 355 aataaaccgaactgttggtggcttattaggatattcttca 394 | ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 272 taaaaacctaacagttggtggtttatttggatattcttca 233
>emb|CR604876.1| full-length cDNA clone CS0DJ011YM22 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 999 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 |||||| ||||| || ||||| | |||| || |||||||||| |||| ||||| |||| Sbjct: 453 cagcagagactgaattgatgttaagatagaagatacatcatatgttggactccatcgatt 394 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||| ||||||||||| |||||||| ||||||||||| | || || |||||||| || Sbjct: 393 ctgaaggatatctaaacatatgctaccatcagcatacacatttggatgaaacattttgga 334 Query: 355 aataaaccgaactgttggtggcttattaggatattcttca 394 | ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 333 taaaaacctaacagttggtggtttatttggatattcttca 294
>gb|AY892633.1| Synthetic construct Homo sapiens clone FLH025725.01L ubiquitin-conjugating enzyme E2B (UBE2B) mRNA, partial cds Length = 459 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 |||||| ||||| || ||||| | |||| || |||||||||| |||| ||||| |||| Sbjct: 339 cagcagagactgaattgatgttaagatagaagatacatcatatgttggactccatcgatt 280 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||| ||||||||||| |||||||| ||||||||||| | || || |||||||| || Sbjct: 279 ctgaaggatatctaaacatatgctaccatcagcatacacatttggatgaaacattttgga 220 Query: 355 aataaaccgaactgttggtggcttattaggatattcttca 394 | ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 219 taaaaacctaacagttggtggtttatttggatattcttca 180
>gb|AY892632.1| Synthetic construct Homo sapiens clone FLH025724.01L ubiquitin-conjugating enzyme E2B (UBE2B) mRNA, partial cds Length = 459 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 |||||| ||||| || ||||| | |||| || |||||||||| |||| ||||| |||| Sbjct: 339 cagcagagactgaattgatgttaagatagaagatacatcatatgttggactccatcgatt 280 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||| ||||||||||| |||||||| ||||||||||| | || || |||||||| || Sbjct: 279 ctgaaggatatctaaacatatgctaccatcagcatacacatttggatgaaacattttgga 220 Query: 355 aataaaccgaactgttggtggcttattaggatattcttca 394 | ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 219 taaaaacctaacagttggtggtttatttggatattcttca 180
>gb|AY890150.1| Synthetic construct Homo sapiens clone FLH025728.01X ubiquitin-conjugating enzyme E2B (UBE2B) mRNA, complete cds Length = 459 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 |||||| ||||| || ||||| | |||| || |||||||||| |||| ||||| |||| Sbjct: 339 cagcagagactgaattgatgttaagatagaagatacatcatatgttggactccatcgatt 280 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||| ||||||||||| |||||||| ||||||||||| | || || |||||||| || Sbjct: 279 ctgaaggatatctaaacatatgctaccatcagcatacacatttggatgaaacattttgga 220 Query: 355 aataaaccgaactgttggtggcttattaggatattcttca 394 | ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 219 taaaaacctaacagttggtggtttatttggatattcttca 180
>gb|AY888571.1| Synthetic construct Homo sapiens clone FLH031098.01X ubiquitin-conjugating enzyme E2B (UBE2B) mRNA, complete cds Length = 459 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 |||||| ||||| || ||||| | |||| || |||||||||| |||| ||||| |||| Sbjct: 339 cagcagagactgaattgatgttaagatagaagatacatcatatgttggactccatcgatt 280 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||| ||||||||||| |||||||| ||||||||||| | || || |||||||| || Sbjct: 279 ctgaaggatatctaaacatatgctaccatcagcatacacatttggatgaaacattttgga 220 Query: 355 aataaaccgaactgttggtggcttattaggatattcttca 394 | ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 219 taaaaacctaacagttggtggtttatttggatattcttca 180
>gb|AY891220.1| Synthetic construct Homo sapiens clone FLH031094.01L ubiquitin-conjugating enzyme E2B (UBE2B) mRNA, partial cds Length = 459 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 |||||| ||||| || ||||| | |||| || |||||||||| |||| ||||| |||| Sbjct: 339 cagcagagactgaattgatgttaagatagaagatacatcatatgttggactccatcgatt 280 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||| ||||||||||| |||||||| ||||||||||| | || || |||||||| || Sbjct: 279 ctgaaggatatctaaacatatgctaccatcagcatacacatttggatgaaacattttgga 220 Query: 355 aataaaccgaactgttggtggcttattaggatattcttca 394 | ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 219 taaaaacctaacagttggtggtttatttggatattcttca 180
>gb|AY893885.1| Synthetic construct Homo sapiens clone FLH127878.01L ubiquitin-conjugating enzyme E2B (UBE2B) mRNA, partial cds Length = 459 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 |||||| ||||| || ||||| | |||| || |||||||||| |||| ||||| |||| Sbjct: 339 cagcagagactgaattgatgttaagatagaagatacatcatatgttggactccatcgatt 280 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||| ||||||||||| |||||||| ||||||||||| | || || |||||||| || Sbjct: 279 ctgaaggatatctaaacatatgctaccatcagcatacacatttggatgaaacattttgga 220 Query: 355 aataaaccgaactgttggtggcttattaggatattcttca 394 | ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 219 taaaaacctaacagttggtggtttatttggatattcttca 180
>gb|AY893756.1| Synthetic construct Homo sapiens clone FLH056675.01L ubiquitin-conjugating enzyme E2B (UBE2B) mRNA, partial cds Length = 459 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 |||||| ||||| || ||||| | |||| || |||||||||| |||| ||||| |||| Sbjct: 339 cagcagagactgaattgatgttaagatagaagatacatcatatgttggactccatcgatt 280 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||| ||||||||||| |||||||| ||||||||||| | || || |||||||| || Sbjct: 279 ctgaaggatatctaaacatatgctaccatcagcatacacatttggatgaaacattttgga 220 Query: 355 aataaaccgaactgttggtggcttattaggatattcttca 394 | ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 219 taaaaacctaacagttggtggtttatttggatattcttca 180
>gb|AY893437.1| Synthetic construct Homo sapiens clone FLH127792.01X ubiquitin-conjugating enzyme E2B (UBE2B) mRNA, complete cds Length = 459 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 |||||| ||||| || ||||| | |||| || |||||||||| |||| ||||| |||| Sbjct: 339 cagcagagactgaattgatgttaagatagaagatacatcatatgttggactccatcgatt 280 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||| ||||||||||| |||||||| ||||||||||| | || || |||||||| || Sbjct: 279 ctgaaggatatctaaacatatgctaccatcagcatacacatttggatgaaacattttgga 220 Query: 355 aataaaccgaactgttggtggcttattaggatattcttca 394 | ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 219 taaaaacctaacagttggtggtttatttggatattcttca 180
>gb|AY893305.1| Synthetic construct Homo sapiens clone FLH056679.01X ubiquitin-conjugating enzyme E2B (UBE2B) mRNA, complete cds Length = 459 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 |||||| ||||| || ||||| | |||| || |||||||||| |||| ||||| |||| Sbjct: 339 cagcagagactgaattgatgttaagatagaagatacatcatatgttggactccatcgatt 280 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||| ||||||||||| |||||||| ||||||||||| | || || |||||||| || Sbjct: 279 ctgaaggatatctaaacatatgctaccatcagcatacacatttggatgaaacattttgga 220 Query: 355 aataaaccgaactgttggtggcttattaggatattcttca 394 | ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 219 taaaaacctaacagttggtggtttatttggatattcttca 180
>gb|AY892850.1| Synthetic construct Homo sapiens clone FLH018605.01L ubiquitin-conjugating enzyme E2B (UBE2B) mRNA, partial cds Length = 459 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 |||||| ||||| || ||||| | |||| || |||||||||| |||| ||||| |||| Sbjct: 339 cagcagagactgaattgatgttaagatagaagatacatcatatgttggactccatcgatt 280 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||| ||||||||||| |||||||| ||||||||||| | || || |||||||| || Sbjct: 279 ctgaaggatatctaaacatatgctaccatcagcatacacatttggatgaaacattttgga 220 Query: 355 aataaaccgaactgttggtggcttattaggatattcttca 394 | ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 219 taaaaacctaacagttggtggtttatttggatattcttca 180
>gb|BC008470.1| Homo sapiens ubiquitin-conjugating enzyme E2B (RAD6 homolog), mRNA (cDNA clone MGC:14743 IMAGE:4281004), complete cds Length = 1001 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 |||||| ||||| || ||||| | |||| || |||||||||| |||| ||||| |||| Sbjct: 426 cagcagagactgaattgatgttaagatagaagatacatcatatgttggactccatcgatt 367 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||| ||||||||||| |||||||| ||||||||||| | || || |||||||| || Sbjct: 366 ctgaaggatatctaaacatatgctaccatcagcatacacatttggatgaaacattttgga 307 Query: 355 aataaaccgaactgttggtggcttattaggatattcttca 394 | ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 306 taaaaacctaacagttggtggtttatttggatattcttca 267
>gb|BC008404.1| Homo sapiens ubiquitin-conjugating enzyme E2B (RAD6 homolog), mRNA (cDNA clone MGC:14524 IMAGE:4278820), complete cds Length = 1006 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 |||||| ||||| || ||||| | |||| || |||||||||| |||| ||||| |||| Sbjct: 426 cagcagagactgaattgatgttaagatagaagatacatcatatgttggactccatcgatt 367 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||| ||||||||||| |||||||| ||||||||||| | || || |||||||| || Sbjct: 366 ctgaaggatatctaaacatatgctaccatcagcatacacatttggatgaaacattttgga 307 Query: 355 aataaaccgaactgttggtggcttattaggatattcttca 394 | ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 306 taaaaacctaacagttggtggtttatttggatattcttca 267
>emb|X53251.1|HSE2P1 H.sapiens mRNA for E2 protein Length = 921 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 |||||| ||||| || ||||| | |||| || |||||||||| |||| ||||| |||| Sbjct: 377 cagcagagactgaattgatgttaagatagaagatacatcatatgttggactccatcgatt 318 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||| ||||||||||| |||||||| ||||||||||| | || || |||||||| || Sbjct: 317 ctgaaggatatctaaacatatgctaccatcagcatacacatttggatgaaacattttgga 258 Query: 355 aataaaccgaactgttggtggcttattaggatattcttca 394 | ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 257 taaaaacctaacagttggtggtttatttggatattcttca 218
>gb|M74525.1|HUMHHR6B Human HHR6B (yeast RAD 6 homologue) mRNA, complete cds Length = 2591 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 |||||| ||||| || ||||| | |||| || |||||||||| |||| ||||| |||| Sbjct: 760 cagcagagactgaattgatgttaagatagaagatacatcatatgttggactccatcgatt 701 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||| ||||||||||| |||||||| ||||||||||| | || || |||||||| || Sbjct: 700 ctgaaggatatctaaacatatgctaccatcagcatacacatttggatgaaacattttgga 641 Query: 355 aataaaccgaactgttggtggcttattaggatattcttca 394 | ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 640 taaaaacctaacagttggtggtttatttggatattcttca 601
>gb|BC077659.1| Xenopus tropicalis MGC89687 protein, mRNA (cDNA clone MGC:89687 IMAGE:7026370), complete cds Length = 1024 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 268 tacatcatatattgggctccactgattctgtaggatatctaagcatatgcttccatcagc 327 |||||||||| |||| ||||| |||| || ||||||||||| |||||||| |||||||| Sbjct: 410 tacatcatatgttggactccagcgattttgaaggatatctaaacatatgctgccatcagc 351 Query: 328 ataaatgttagggtgaaacat 348 ||||| || ||||||||||| Sbjct: 350 ataaacatttgggtgaaacat 330
>ref|NM_001005124.1| Xenopus tropicalis MGC89687 protein (MGC89687), mRNA Length = 1024 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 268 tacatcatatattgggctccactgattctgtaggatatctaagcatatgcttccatcagc 327 |||||||||| |||| ||||| |||| || ||||||||||| |||||||| |||||||| Sbjct: 410 tacatcatatgttggactccagcgattttgaaggatatctaaacatatgctgccatcagc 351 Query: 328 ataaatgttagggtgaaacat 348 ||||| || ||||||||||| Sbjct: 350 ataaacatttgggtgaaacat 330
>gb|AC012188.2|F14L17 Sequence of BAC F14L17 from Arabidopsis thaliana chromosome 1, complete sequence Length = 111686 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 244 ctggatggatgtaagtatagcagctacatcatatattgggctccactgattctgtaggat 303 ||||||||| |||||||||||||| |||||||| ||||| |||||||| || ||||| || Sbjct: 58597 ctggatggaggtaagtatagcagcaacatcatagattggactccactggttttgtagaat 58656 Query: 304 atctaagcatatgcttccatcagcataaa 332 || ||||| || || ||||| ||||||| Sbjct: 58657 gtccaagcagatactcccatctgcataaa 58685 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 335 ttagggtgaaacatccgagaaataaaccgaactgttggtggcttattaggatattcttca 394 ||||| ||||||||||| || | |||||||||||||||||| ||||| ||||| |||||| Sbjct: 58785 ttaggatgaaacatccgtgacacaaaccgaactgttggtggtttattgggataatcttca 58844 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 449 ccaaaaatcacagcattccacagcattatgttgttgtcctg 489 ||||| || ||||||||||| ||||| |||||||||||||| Sbjct: 59091 ccaaatatgacagcattccagagcataatgttgttgtcctg 59131
>emb|CR761899.2| Xenopus tropicalis finished cDNA, clone TNeu104p10 Length = 964 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 268 tacatcatatattgggctccactgattctgtaggatatctaagcatatgcttccatcagc 327 |||||||||| |||| ||||| |||| || ||||||||||| |||||||| |||||||| Sbjct: 344 tacatcatatgttggactccagcgattttgaaggatatctaaacatatgctgccatcagc 285 Query: 328 ataaatgttagggtgaaacat 348 ||||| || ||||||||||| Sbjct: 284 ataaacatttgggtgaaacat 264
>gb|L19351.1|ATHUBIQUA Arabidopsis thaliana 16kDa ubiquitin conjugating enzyme (UBC1) gene, complete cds Length = 1887 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 244 ctggatggatgtaagtatagcagctacatcatatattgggctccactgattctgtaggat 303 ||||||||| |||||||||||||| |||||||| ||||| |||||||| || ||||| || Sbjct: 1485 ctggatggaggtaagtatagcagcaacatcatagattggactccactggttttgtagaat 1426 Query: 304 atctaagcatatgcttccatcagcataaa 332 || ||||| || || ||||| ||||||| Sbjct: 1425 gtccaagcagatactcccatctgcataaa 1397 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 335 ttagggtgaaacatccgagaaataaaccgaactgttggtggcttattaggatattcttca 394 ||||| ||||||||||| || | |||||||||||||||||| ||||| ||||| |||||| Sbjct: 1297 ttaggatgaaacatccgtgacacaaaccgaactgttggtggtttattgggataatcttca 1238 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 449 ccaaaaatcacagcattccacagcattatgttgttgtcctg 489 ||||| || ||||||||||| ||||| |||||||||||||| Sbjct: 991 ccaaatatgacagcattccagagcataatgttgttgtcctg 951
>ref|XM_845564.1| PREDICTED: Canis familiaris similar to ubiquitin conjugating enzyme, transcript variant 2 (LOC474683), mRNA Length = 1819 Score = 71.9 bits (36), Expect = 2e-09 Identities = 81/96 (84%) Strand = Plus / Minus Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 |||||| ||||| || ||||| | |||| || |||||||||| |||| ||||| |||| Sbjct: 443 cagcagagactgaattgatgttaagatagaagatacatcatatgttggactccatcgatt 384 Query: 295 ctgtaggatatctaagcatatgcttccatcagcata 330 ||| ||||||||||| |||||||| ||||||||||| Sbjct: 383 ctgaaggatatctaaacatatgctaccatcagcata 348
>ref|XM_856849.1| PREDICTED: Canis familiaris similar to ubiquitin conjugating enzyme, transcript variant 4 (LOC474683), mRNA Length = 1625 Score = 71.9 bits (36), Expect = 2e-09 Identities = 81/96 (84%) Strand = Plus / Minus Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 |||||| ||||| || ||||| | |||| || |||||||||| |||| ||||| |||| Sbjct: 249 cagcagagactgaattgatgttaagatagaagatacatcatatgttggactccatcgatt 190 Query: 295 ctgtaggatatctaagcatatgcttccatcagcata 330 ||| ||||||||||| |||||||| ||||||||||| Sbjct: 189 ctgaaggatatctaaacatatgctaccatcagcata 154
>gb|AC002521.3| Arabidopsis thaliana chromosome 2 clone T20F6 map CIC11A04, complete sequence Length = 81004 Score = 71.9 bits (36), Expect = 2e-09 Identities = 102/124 (82%) Strand = Plus / Plus Query: 116 tagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctta 175 ||||| || |||||||| || ||||||| ||| || ||| | | ||||||||| ||||| Sbjct: 52358 tagtcggcagtccagctttgttcgacaacctcgcggactcttctgttgtactcgcgcttg 52417 Query: 176 ttctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacac 235 | ||||||||||| || |||||||| || || ||||| |||||||| ||||||||||| Sbjct: 52418 ctttcactgaacattcgtgcagcttccgaatttgcaggagaattcggattaggatcacat 52477 Query: 236 agca 239 |||| Sbjct: 52478 agca 52481 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 248 atggatgtaagtatagcagctacatcatatattgggctccactgattctgtaggatatct 307 ||||| || ||||||||||| ||||| |||||||| ||||| || || || || || || Sbjct: 52644 atggaggttagtatagcagcgacatcgtatattggactccattggttttggagaatgtcc 52703 Query: 308 aagcatatgcttccatcagcataaa 332 |||||||| || ||||||||||||| Sbjct: 52704 aagcatatactcccatcagcataaa 52728 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 344 aacatccgagaaataaaccgaactgttggtggcttattaggatattcttc 393 |||||||| |||| |||||| ||||||||||| ||||| ||||| ||||| Sbjct: 52824 aacatccgtgaaacaaaccgcactgttggtggtttatttggataatcttc 52873
>emb|CR407634.1| Homo sapiens full open reading frame cDNA clone RZPDo834E032D for gene UBE2B, ubiquitin-conjugating enzyme E2B (RAD6 homolog) complete cds, without stopcodon Length = 456 Score = 71.9 bits (36), Expect = 2e-09 Identities = 129/160 (80%) Strand = Plus / Minus Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 |||||| ||||| || ||||| | |||| || ||| |||||| |||| ||||| |||| Sbjct: 339 cagcagagactgaattgatgttaagatagaagatacgtcatatgttggactccatcgatt 280 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||| ||||||||||| |||||||| ||||||||||| | || || |||||||| || Sbjct: 279 ctgaaggatatctaaacatatgctaccatcagcatacacatttggatgaaacattttgga 220 Query: 355 aataaaccgaactgttggtggcttattaggatattcttca 394 | ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 219 taaaaacctaacagttggtggtttatttggatattcttca 180
>gb|L19353.1|ATHUBIQUC Arabidopsis thaliana 16kDa ubiquitin conjugating enzyme (UBC2) gene, complete cds Length = 2282 Score = 71.9 bits (36), Expect = 2e-09 Identities = 102/124 (82%) Strand = Plus / Minus Query: 116 tagtctgccgtccagctctgctcgacaatctcccgcactttgcggttgtactctcgctta 175 ||||| || |||||||| || ||||||| ||| || ||| | | ||||||||| ||||| Sbjct: 1606 tagtcggcagtccagctttgttcgacaacctcgcggactcttctgttgtactcgcgcttg 1547 Query: 176 ttctcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacac 235 | ||||||||||| || |||||||| || || ||||| |||||||| ||||||||||| Sbjct: 1546 ctttcactgaacattcgtgcagcttccgaatttgcaggagaattcggattaggatcacat 1487 Query: 236 agca 239 |||| Sbjct: 1486 agca 1483 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 248 atggatgtaagtatagcagctacatcatatattgggctccactgattctgtaggatatct 307 ||||| || ||||||||||| ||||| |||||||| ||||| || || || || || || Sbjct: 1320 atggaggttagtatagcagcgacatcgtatattggactccattggttttggagaatgtcc 1261 Query: 308 aagcatatgcttccatcagcataaa 332 |||||||| || ||||||||||||| Sbjct: 1260 aagcatatactcccatcagcataaa 1236 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 344 aacatccgagaaataaaccgaactgttggtggcttattaggatattcttc 393 |||||||| |||| |||||| ||||||||||| ||||| ||||| ||||| Sbjct: 1140 aacatccgtgaaacaaaccgcactgttggtggtttatttggataatcttc 1091
>gb|AC109454.3| Homo sapiens chromosome 5 clone RP11-215P8, complete sequence Length = 142276 Score = 69.9 bits (35), Expect = 8e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 268 tacatcatatattgggctccactgattctgtaggatatctaagcatatgcttccatcagc 327 |||||||||| |||| ||||| ||||||| ||||||||||| |||||||| |||||||| Sbjct: 83931 tacatcatatgttggactccatcgattctgaaggatatctaaacatatgctaccatcagc 83872 Query: 328 ata 330 ||| Sbjct: 83871 ata 83869 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 358 aaaccgaactgttggtggcttattaggatattcttca 394 ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 76325 aaacctaacagttggtggtttatttggatattcttca 76289
>gb|DQ090910.1| Homo sapiens ubiquitin-conjugating enzyme E2B (RAD6 homolog) (UBE2B) gene, complete cds Length = 24929 Score = 69.9 bits (35), Expect = 8e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 268 tacatcatatattgggctccactgattctgtaggatatctaagcatatgcttccatcagc 327 |||||||||| |||| ||||| ||||||| ||||||||||| |||||||| |||||||| Sbjct: 19214 tacatcatatgttggactccatcgattctgaaggatatctaaacatatgctaccatcagc 19155 Query: 328 ata 330 ||| Sbjct: 19154 ata 19152 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 358 aaaccgaactgttggtggcttattaggatattcttca 394 ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 11606 aaacctaacagttggtggtttatttggatattcttca 11570
>ref|NM_009458.2| Mus musculus ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae) (Ube2b), mRNA Length = 1631 Score = 67.9 bits (34), Expect = 3e-08 Identities = 103/126 (81%) Strand = Plus / Minus Query: 269 acatcatatattgggctccactgattctgtaggatatctaagcatatgcttccatcagca 328 ||||||||| | || ||||| ||||||| ||||||||||| |||||||| ||||||||| Sbjct: 356 acatcatatgtgggactccatcgattctgcaggatatctaaacatatgctaccatcagca 297 Query: 329 taaatgttagggtgaaacatccgagaaataaaccgaactgttggtggcttattaggatat 388 || | || || |||||||| || | ||||| ||| |||||||| ||||| |||||| Sbjct: 296 tacacatttggatgaaacattttggataaaaacctaacggttggtggtttatttggatat 237 Query: 389 tcttca 394 |||||| Sbjct: 236 tcttca 231
>dbj|AK147785.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library, clone:G270037A10 product:ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae), full insert sequence Length = 2124 Score = 67.9 bits (34), Expect = 3e-08 Identities = 103/126 (81%) Strand = Plus / Minus Query: 269 acatcatatattgggctccactgattctgtaggatatctaagcatatgcttccatcagca 328 ||||||||| | || ||||| ||||||| ||||||||||| |||||||| ||||||||| Sbjct: 436 acatcatatgtgggactccatcgattctgcaggatatctaaacatatgctaccatcagca 377 Query: 329 taaatgttagggtgaaacatccgagaaataaaccgaactgttggtggcttattaggatat 388 || | || || |||||||| || | ||||| ||| |||||||| ||||| |||||| Sbjct: 376 tacacatttggatgaaacattttggataaaaacctaacggttggtggtttatttggatat 317 Query: 389 tcttca 394 |||||| Sbjct: 316 tcttca 311
>dbj|AK152645.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830081L10 product:ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae), full insert sequence Length = 1695 Score = 67.9 bits (34), Expect = 3e-08 Identities = 103/126 (81%) Strand = Plus / Minus Query: 269 acatcatatattgggctccactgattctgtaggatatctaagcatatgcttccatcagca 328 ||||||||| | || ||||| ||||||| ||||||||||| |||||||| ||||||||| Sbjct: 418 acatcatatgtgggactccatcgattctgcaggatatctaaacatatgctaccatcagca 359 Query: 329 taaatgttagggtgaaacatccgagaaataaaccgaactgttggtggcttattaggatat 388 || | || || |||||||| || | ||||| ||| |||||||| ||||| |||||| Sbjct: 358 tacacatttggatgaaacattttggataaaaacctaacggttggtggtttatttggatat 299 Query: 389 tcttca 394 |||||| Sbjct: 298 tcttca 293
>dbj|AK152316.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830061H19 product:ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae), full insert sequence Length = 1695 Score = 67.9 bits (34), Expect = 3e-08 Identities = 103/126 (81%) Strand = Plus / Minus Query: 269 acatcatatattgggctccactgattctgtaggatatctaagcatatgcttccatcagca 328 ||||||||| | || ||||| ||||||| ||||||||||| |||||||| ||||||||| Sbjct: 418 acatcatatgtgggactccatcgattctgcaggatatctaaacatatgctaccatcagca 359 Query: 329 taaatgttagggtgaaacatccgagaaataaaccgaactgttggtggcttattaggatat 388 || | || || |||||||| || | ||||| ||| |||||||| ||||| |||||| Sbjct: 358 tacacatttggatgaaacattttggataaaaacctaacggttggtggtttatttggatat 299 Query: 389 tcttca 394 |||||| Sbjct: 298 tcttca 293
>dbj|AK153174.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830126D18 product:ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae), full insert sequence Length = 1695 Score = 67.9 bits (34), Expect = 3e-08 Identities = 103/126 (81%) Strand = Plus / Minus Query: 269 acatcatatattgggctccactgattctgtaggatatctaagcatatgcttccatcagca 328 ||||||||| | || ||||| ||||||| ||||||||||| |||||||| ||||||||| Sbjct: 418 acatcatatgtgggactccatcgattctgcaggatatctaaacatatgctaccatcagca 359 Query: 329 taaatgttagggtgaaacatccgagaaataaaccgaactgttggtggcttattaggatat 388 || | || || |||||||| || | ||||| ||| |||||||| ||||| |||||| Sbjct: 358 tacacatttggatgaaacattttggataaaaacctaacggttggtggtttatttggatat 299 Query: 389 tcttca 394 |||||| Sbjct: 298 tcttca 293
>dbj|AK169229.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920095C14 product:ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae), full insert sequence Length = 1696 Score = 67.9 bits (34), Expect = 3e-08 Identities = 103/126 (81%) Strand = Plus / Minus Query: 269 acatcatatattgggctccactgattctgtaggatatctaagcatatgcttccatcagca 328 ||||||||| | || ||||| ||||||| ||||||||||| |||||||| ||||||||| Sbjct: 418 acatcatatgtgggactccatcgattctgcaggatatctaaacatatgctaccatcagca 359 Query: 329 taaatgttagggtgaaacatccgagaaataaaccgaactgttggtggcttattaggatat 388 || | || || |||||||| || | ||||| ||| |||||||| ||||| |||||| Sbjct: 358 tacacatttggatgaaacattttggataaaaacctaacggttggtggtttatttggatat 299 Query: 389 tcttca 394 |||||| Sbjct: 298 tcttca 293
>dbj|AK010432.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410006O05 product:UBIQUITIN-CONJUGATING ENZYME E2 B (EC 6.3.2.19) (UBIQUITIN-PROTEIN LIGASE B) (UBIQUITIN CARRIER PROTEIN B) (HR6B) (E2-17 KDA) homolog [Mus musculus], full insert sequence Length = 782 Score = 67.9 bits (34), Expect = 3e-08 Identities = 103/126 (81%) Strand = Plus / Minus Query: 269 acatcatatattgggctccactgattctgtaggatatctaagcatatgcttccatcagca 328 ||||||||| | || ||||| ||||||| ||||||||||| |||||||| ||||||||| Sbjct: 333 acatcatatgtgggactccatcgattctgcaggatatctaaacatatgctaccatcagca 274 Query: 329 taaatgttagggtgaaacatccgagaaataaaccgaactgttggtggcttattaggatat 388 || | || || |||||||| || | ||||| ||| |||||||| ||||| |||||| Sbjct: 273 tacacatttggatgaaacattttggataaaaacctaacggttggtggtttatttggatat 214 Query: 389 tcttca 394 |||||| Sbjct: 213 tcttca 208
>dbj|AK011363.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610009I04 product:ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae), full insert sequence Length = 1631 Score = 67.9 bits (34), Expect = 3e-08 Identities = 103/126 (81%) Strand = Plus / Minus Query: 269 acatcatatattgggctccactgattctgtaggatatctaagcatatgcttccatcagca 328 ||||||||| | || ||||| ||||||| ||||||||||| |||||||| ||||||||| Sbjct: 356 acatcatatgtgggactccatcgattctgcaggatatctaaacatatgctaccatcagca 297 Query: 329 taaatgttagggtgaaacatccgagaaataaaccgaactgttggtggcttattaggatat 388 || | || || |||||||| || | ||||| ||| |||||||| ||||| |||||| Sbjct: 296 tacacatttggatgaaacattttggataaaaacctaacggttggtggtttatttggatat 237 Query: 389 tcttca 394 |||||| Sbjct: 236 tcttca 231
>gb|U57690.1|MMU57690 Mus musculus ubiquitin-conjugating enzyme E214K mRNA, complete cds Length = 923 Score = 67.9 bits (34), Expect = 3e-08 Identities = 103/126 (81%) Strand = Plus / Minus Query: 269 acatcatatattgggctccactgattctgtaggatatctaagcatatgcttccatcagca 328 ||||||||| | || ||||| ||||||| ||||||||||| |||||||| ||||||||| Sbjct: 348 acatcatatgtgggactccatcgattctgcaggatatctaaacatatgctaccatcagca 289 Query: 329 taaatgttagggtgaaacatccgagaaataaaccgaactgttggtggcttattaggatat 388 || | || || |||||||| || | ||||| ||| |||||||| ||||| |||||| Sbjct: 288 tacacatttggatgaaacattttggataaaaacctaacggttggtggtttatttggatat 229 Query: 389 tcttca 394 |||||| Sbjct: 228 tcttca 223
>emb|X96859.1|MMHR6BGEN M.musculus mRNA for ubiquitin-conjugating enzyme Length = 966 Score = 67.9 bits (34), Expect = 3e-08 Identities = 103/126 (81%) Strand = Plus / Minus Query: 269 acatcatatattgggctccactgattctgtaggatatctaagcatatgcttccatcagca 328 ||||||||| | || ||||| ||||||| ||||||||||| |||||||| ||||||||| Sbjct: 332 acatcatatgtgggactccatcgattctgcaggatatctaaacatatgctaccatcagca 273 Query: 329 taaatgttagggtgaaacatccgagaaataaaccgaactgttggtggcttattaggatat 388 || | || || |||||||| || | ||||| ||| |||||||| ||||| |||||| Sbjct: 272 tacacatttggatgaaacattttggataaaaacctaacggttggtggtttatttggatat 213 Query: 389 tcttca 394 |||||| Sbjct: 212 tcttca 207
>ref|NM_001037459.1| Bos taurus ubiquitin-conjugating enzyme E2B (RAD6 homolog) (UBE2B), mRNA Length = 690 Score = 63.9 bits (32), Expect = 5e-07 Identities = 128/160 (80%) Strand = Plus / Minus Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 |||||| ||||| || ||||| | |||| || |||||| ||| |||| ||||| ||| Sbjct: 423 cagcagagactgaattgatgttaagatagaagatacatcgtatgttggactccatctatt 364 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||| ||||||||||| |||||||| ||||||||||| | || || |||||||| || Sbjct: 363 ctgaaggatatctaaacatatgctaccatcagcatacacatttggatgaaacattttgga 304 Query: 355 aataaaccgaactgttggtggcttattaggatattcttca 394 | ||||| ||| ||||| |||||||| |||||||||||| Sbjct: 303 taaaaacctaacagttggcggcttatttggatattcttca 264
>gb|BC108202.1| Bos taurus ubiquitin-conjugating enzyme E2B (RAD6 homolog), mRNA (cDNA clone MGC:133582 IMAGE:8061814), complete cds Length = 690 Score = 63.9 bits (32), Expect = 5e-07 Identities = 128/160 (80%) Strand = Plus / Minus Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 |||||| ||||| || ||||| | |||| || |||||| ||| |||| ||||| ||| Sbjct: 423 cagcagagactgaattgatgttaagatagaagatacatcgtatgttggactccatctatt 364 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||| ||||||||||| |||||||| ||||||||||| | || || |||||||| || Sbjct: 363 ctgaaggatatctaaacatatgctaccatcagcatacacatttggatgaaacattttgga 304 Query: 355 aataaaccgaactgttggtggcttattaggatattcttca 394 | ||||| ||| ||||| |||||||| |||||||||||| Sbjct: 303 taaaaacctaacagttggcggcttatttggatattcttca 264
>gb|M62387.1|RABUCE Oryctolagus cuniculus ubiquitin conjugating enzyme mRNA, complete cds Length = 885 Score = 63.9 bits (32), Expect = 5e-07 Identities = 128/160 (80%) Strand = Plus / Minus Query: 235 cagcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgatt 294 |||||| ||||| || ||||| | |||| || |||||| ||| |||| ||||| ||| Sbjct: 342 cagcagagactgaattgatgttaagatagaagatacatcgtatgttggactccatctatt 283 Query: 295 ctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgaga 354 ||| ||||||||||| |||||||| ||||||||||| | || || |||||||| || Sbjct: 282 ctgaaggatatctaaacatatgctaccatcagcatacacattgggatgaaacattttgga 223 Query: 355 aataaaccgaactgttggtggcttattaggatattcttca 394 | ||||| ||| ||||| |||||||| |||||||||||| Sbjct: 222 taaaaacctaacagttggcggcttatttggatattcttca 183
>gb|AF463760.1| Mus musculus strain C57BL/6J cytokine gene cluster, partial sequence Length = 12819 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 269 acatcatatattgggctccactgattctgtaggatatctaagcatatgcttccatcagca 328 ||||||||| | || ||||| ||||||| ||||||||||| |||||||| ||||||||| Sbjct: 7447 acatcatatgtgggactccatcgattctgcaggatatctaaacatatgctaccatcagca 7388 Query: 329 ta 330 || Sbjct: 7387 ta 7386 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 358 aaaccgaactgttggtggcttattaggatattcttca 394 ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 4665 aaacctaacggttggtggtttatttggatattcttca 4629
>emb|AL669920.15| Mouse DNA sequence from clone RP23-263C23 on chromosome 11, complete sequence Length = 216776 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 269 acatcatatattgggctccactgattctgtaggatatctaagcatatgcttccatcagca 328 ||||||||| | || ||||| ||||||| ||||||||||| |||||||| ||||||||| Sbjct: 154349 acatcatatgtgggactccatcgattctgcaggatatctaaacatatgctaccatcagca 154408 Query: 329 ta 330 || Sbjct: 154409 ta 154410 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 358 aaaccgaactgttggtggcttattaggatattcttca 394 ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 157131 aaacctaacggttggtggtttatttggatattcttca 157167
>ref|XM_790883.1| PREDICTED: Strongylocentrotus purpuratus similar to Ubiquitin-conjugating enzyme E2 A (Ubiquitin-protein ligase A) (Ubiquitin carrier protein A) (HR6A) (mHR6A) (LOC591316), mRNA Length = 426 Score = 56.0 bits (28), Expect = 1e-04 Identities = 88/108 (81%) Strand = Plus / Minus Query: 242 gactggatggatgtaagtatagcagctacatcatatattgggctccactgattctgtagg 301 ||||| || |||||||| || || | |||||||||| | || ||||| ||||||||| Sbjct: 293 gactgtattgatgtaaggattgctgatacatcatatgtaggactccatctattctgtaga 234 Query: 302 atatctaagcatatgcttccatcagcataaatgttagggtgaaacatc 349 ||||| ||||| || | |||||||||||| | ||||||||||||||| Sbjct: 233 atatccaagcagattcctccatcagcatatacattagggtgaaacatc 186
>dbj|AB015469.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19B1 Length = 69927 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 281 gggctccactgattctgtaggatatctaagcatatgcttccatcagcataaa 332 ||||||||||| || || | |||||| ||||| ||||||||||||||||||| Sbjct: 44936 gggctccactggttttgcaagatatccaagcaaatgcttccatcagcataaa 44885
>gb|L19352.1|ATHUBIQUB Arabidopsis thaliana 16kDa ubiquitin conjugating enzyme (UBC3) gene, complete cds and flanking regions Length = 2342 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 281 gggctccactgattctgtaggatatctaagcatatgcttccatcagcataaa 332 ||||||||||| || || | |||||| ||||| ||||||||||||||||||| Sbjct: 1669 gggctccactggttttgcaagatatccaagcaaatgcttccatcagcataaa 1618
>gb|AY190722.1| Pagrus major ubiquitin-conjugating enzyme E2A mRNA, complete cds Length = 592 Score = 54.0 bits (27), Expect = 5e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 236 agcagcgactggatggatgtaagtatagcagctacatcatatattgggctccactgattc 295 ||||| |||||||| |||||||| |||| | ||||||||| | || ||||| ||||| Sbjct: 457 agcagggactggatagatgtaagaatagaggacacatcatatgtgggactccaacgattc 398 Query: 296 tgtaggatatctaagcatatgcttccatcagcata 330 |||||||| || || ||||| |||||||| ||||| Sbjct: 397 tgtaggatgtccaaacatatacttccatctgcata 363 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 443 tcagggccaaaaatcacagcattccacagcattatgttgtt 483 ||||||||||| || || |||||||||| ||| |||||||| Sbjct: 250 tcagggccaaatatgactgcattccacaccatgatgttgtt 210
>gb|BC070946.1| Rattus norvegicus ubiquitin-conjugating enzyme E2B, RAD6 homolog (S. cerevisiae), mRNA (cDNA clone MGC:91645 IMAGE:7103580), complete cds Length = 1705 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Minus Query: 293 ttctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccga 352 ||||| ||||| |||||||||||||| || |||||||| | || || |||||||| Sbjct: 375 ttctgcaggatgtctaagcatatgctgccgtcagcatacacatttggatgaaacattttg 316 Query: 353 gaaataaaccgaactgttggtggcttattaggatattcttca 394 || | ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 315 gataaaaacctaacggttggtggtttatttggatattcttca 274
>ref|NM_031138.1| Rattus norvegicus ubiquitin-conjugating enzyme E2B, RAD6 homolog (S. cerevisiae) (Ube2b), mRNA Length = 1737 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Minus Query: 293 ttctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccga 352 ||||| ||||| |||||||||||||| || |||||||| | || || |||||||| Sbjct: 297 ttctgcaggatgtctaagcatatgctgccgtcagcatacacatttggatgaaacattttg 238 Query: 353 gaaataaaccgaactgttggtggcttattaggatattcttca 394 || | ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 237 gataaaaacctaacggttggtggtttatttggatattcttca 196
>gb|AF144083.1|AF144083 Rattus norvegicus ubiquitin-conjugating enzyme mRNA, complete cds Length = 1737 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Minus Query: 293 ttctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccga 352 ||||| ||||| |||||||||||||| || |||||||| | || || |||||||| Sbjct: 297 ttctgcaggatgtctaagcatatgctgccgtcagcatacacatttggatgaaacattttg 238 Query: 353 gaaataaaccgaactgttggtggcttattaggatattcttca 394 || | ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 237 gataaaaacctaacggttggtggtttatttggatattcttca 196
>gb|M62388.1|RATUCE Rattus norvegicus ubiquitin conjugating enzyme mRNA, complete cds Length = 923 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Minus Query: 293 ttctgtaggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccga 352 ||||| ||||| |||||||||||||| || |||||||| | || || |||||||| Sbjct: 324 ttctgcaggatgtctaagcatatgctgccgtcagcatacacatttggatgaaacattttg 265 Query: 353 gaaataaaccgaactgttggtggcttattaggatattcttca 394 || | ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 264 gataaaaacctaacggttggtggtttatttggatattcttca 223
>ref|XM_968596.1| PREDICTED: Tribolium castaneum similar to CG4443-PA (LOC662505), mRNA Length = 822 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 320 ccatcagcataaatgttagggtgaaacat 348 |||||||||||||| |||||||||||||| Sbjct: 348 ccatcagcataaatattagggtgaaacat 320
>gb|AF508551.1| Fundulus heteroclitus ubiquitin conjugating enzyme E2A mRNA, complete cds Length = 784 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 443 tcagggccaaaaatcacagcattccacagcattatgttgtt 483 |||||||||||||| || |||||||||| ||| |||||||| Sbjct: 167 tcagggccaaaaatgactgcattccacaccatgatgttgtt 127
>emb|BX821042.1|CNS0AA78 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH94ZD08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 825 Score = 50.1 bits (25), Expect = 0.007 Identities = 82/101 (81%) Strand = Plus / Minus Query: 179 tcactgaacatgcgggcagcttctgagttagcaggcgaattcgggttaggatcacacagc 238 ||||||||||| || ||||| || || | ||||| |||| ||| ||||||||||| ||| Sbjct: 587 tcactgaacattcgtgcagcgtccgaatgtgcaggagaatgcggattaggatcacatagc 528 Query: 239 agcgactggatggatgtaagtatagcagctacatcatatat 279 | ||||| |||| || ||||||||||| ||||| ||||| Sbjct: 527 aatgactgagtggaggtgagtatagcagcaacatcgtatat 487
>emb|CR673295.1|CNS0FIHH Tetraodon nigroviridis full-length cDNA Length = 1214 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Minus Query: 291 gattctgtaggatatctaagcatatgcttccatcagcata 330 ||||||| || |||||||||||||||||||| || ||||| Sbjct: 392 gattctgaagtatatctaagcatatgcttccgtccgcata 353
>emb|CR731935.2|CNS0GRPG Tetraodon nigroviridis full-length cDNA Length = 1184 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Minus Query: 291 gattctgtaggatatctaagcatatgcttccatcagcata 330 ||||||| || |||||||||||||||||||| || ||||| Sbjct: 340 gattctgaagtatatctaagcatatgcttccgtccgcata 301
>emb|CR727282.1|CNS0GO48 Tetraodon nigroviridis full-length cDNA Length = 1184 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Minus Query: 291 gattctgtaggatatctaagcatatgcttccatcagcata 330 ||||||| || |||||||||||||||||||| || ||||| Sbjct: 351 gattctgaagtatatctaagcatatgcttccgtccgcata 312
>emb|CR704189.2|CNS0G6AX Tetraodon nigroviridis full-length cDNA Length = 1163 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Minus Query: 291 gattctgtaggatatctaagcatatgcttccatcagcata 330 ||||||| || |||||||||||||||||||| || ||||| Sbjct: 328 gattctgaagtatatctaagcatatgcttccgtccgcata 289
>emb|CR694674.2|CNS0FYYM Tetraodon nigroviridis full-length cDNA Length = 1200 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Minus Query: 291 gattctgtaggatatctaagcatatgcttccatcagcata 330 ||||||| || |||||||||||||||||||| || ||||| Sbjct: 358 gattctgaagtatatctaagcatatgcttccgtccgcata 319
>emb|CR687154.2|CNS0FT5Q Tetraodon nigroviridis full-length cDNA Length = 620 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Minus Query: 291 gattctgtaggatatctaagcatatgcttccatcagcata 330 ||||||| || |||||||||||||||||||| || ||||| Sbjct: 355 gattctgaagtatatctaagcatatgcttccgtccgcata 316
>emb|CR685494.2|CNS0FRVM Tetraodon nigroviridis full-length cDNA Length = 1191 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Minus Query: 291 gattctgtaggatatctaagcatatgcttccatcagcata 330 ||||||| || |||||||||||||||||||| || ||||| Sbjct: 344 gattctgaagtatatctaagcatatgcttccgtccgcata 305
>emb|CR683455.2|CNS0FQAZ Tetraodon nigroviridis full-length cDNA Length = 1196 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Minus Query: 291 gattctgtaggatatctaagcatatgcttccatcagcata 330 ||||||| || |||||||||||||||||||| || ||||| Sbjct: 354 gattctgaagtatatctaagcatatgcttccgtccgcata 315
>emb|CR683544.2|CNS0FQDG Tetraodon nigroviridis full-length cDNA Length = 1155 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Minus Query: 291 gattctgtaggatatctaagcatatgcttccatcagcata 330 ||||||| || |||||||||||||||||||| || ||||| Sbjct: 350 gattctgaagtatatctaagcatatgcttccgtccgcata 311
>emb|CR680891.2|CNS0FOBR Tetraodon nigroviridis full-length cDNA Length = 1196 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Minus Query: 291 gattctgtaggatatctaagcatatgcttccatcagcata 330 ||||||| || |||||||||||||||||||| || ||||| Sbjct: 354 gattctgaagtatatctaagcatatgcttccgtccgcata 315
>emb|CR676804.2|CNS0FL6O Tetraodon nigroviridis full-length cDNA Length = 1207 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Minus Query: 291 gattctgtaggatatctaagcatatgcttccatcagcata 330 ||||||| || |||||||||||||||||||| || ||||| Sbjct: 355 gattctgaagtatatctaagcatatgcttccgtccgcata 316
>emb|CR675782.2|CNS0FKEK Tetraodon nigroviridis full-length cDNA Length = 1207 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Minus Query: 291 gattctgtaggatatctaagcatatgcttccatcagcata 330 ||||||| || |||||||||||||||||||| || ||||| Sbjct: 402 gattctgaagtatatctaagcatatgcttccgtccgcata 363
>emb|CR673734.2|CNS0FITO Tetraodon nigroviridis full-length cDNA Length = 960 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Minus Query: 291 gattctgtaggatatctaagcatatgcttccatcagcata 330 ||||||| || |||||||||||||||||||| || ||||| Sbjct: 117 gattctgaagtatatctaagcatatgcttccgtccgcata 78
>emb|CR666397.2|CNS0FD5V Tetraodon nigroviridis full-length cDNA Length = 917 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Minus Query: 291 gattctgtaggatatctaagcatatgcttccatcagcata 330 ||||||| || |||||||||||||||||||| || ||||| Sbjct: 95 gattctgaagtatatctaagcatatgcttccgtccgcata 56
>emb|CR659988.2|CNS0F87U Tetraodon nigroviridis full-length cDNA Length = 1192 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Minus Query: 291 gattctgtaggatatctaagcatatgcttccatcagcata 330 ||||||| || |||||||||||||||||||| || ||||| Sbjct: 351 gattctgaagtatatctaagcatatgcttccgtccgcata 312
>emb|CR648155.2|CNS0EZ35 Tetraodon nigroviridis full-length cDNA Length = 1157 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Minus Query: 291 gattctgtaggatatctaagcatatgcttccatcagcata 330 ||||||| || |||||||||||||||||||| || ||||| Sbjct: 340 gattctgaagtatatctaagcatatgcttccgtccgcata 301
>emb|AL606805.21| Mouse DNA sequence from clone RP23-449F16 on chromosome 11 Contains the 5' end of the Lpo gene for lactoperoxidase, a novel gene, the Epx gene for eosinophil peroxidase, the Olfr462, Olfr463 and Olfr464 genes for olfactory receptors 462, 463 and 464, a novel gene, a cytochrome c oxidase subunit VIc (Cox6c) pseudogene, a ubiquitin-conjugating enzyme E2B (S. cerevisiae RAD6 homology) (Ube2b) pseudogene and the 3' end of the gene for dynein light chain 2 (6720463E02Rik), complete sequence Length = 184069 Score = 48.1 bits (24), Expect = 0.028 Identities = 78/96 (81%) Strand = Plus / Minus Query: 299 aggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaaata 358 ||||||||||| |||||||| ||| ||||||| | || || |||||||| | || | | Sbjct: 134134 aggatatctaaacatatgctaccaccagcatacacatttggatgaaacattctggataaa 134075 Query: 359 aaccgaactgttggtggcttattaggatattcttca 394 |||| || ||||||| |||||| |||||||||||| Sbjct: 134074 aacctaatggttggtgacttatttggatattcttca 134039
>gb|AF299059.1|AF299059 Mus musculus ubiquitin-conjugating enzyme MHR6BN (Hr6bn) gene, complete cds Length = 550 Score = 48.1 bits (24), Expect = 0.028 Identities = 78/96 (81%) Strand = Plus / Minus Query: 299 aggatatctaagcatatgcttccatcagcataaatgttagggtgaaacatccgagaaata 358 ||||||||||| |||||||| ||| ||||||| | || || |||||||| | || | | Sbjct: 419 aggatatctaaacatatgctaccaccagcatacacatttggatgaaacattctggataaa 360 Query: 359 aaccgaactgttggtggcttattaggatattcttca 394 |||| || ||||||| |||||| |||||||||||| Sbjct: 359 aacctaatggttggtgacttatttggatattcttca 324
>ref|NM_001002747.1| Danio rerio zgc:100921 (zgc:100921), mRNA Length = 2065 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Minus Query: 444 cagggccaaaaatcacagcattccacagcattatgttgtt 483 |||| |||||||| ||||| ||||||||||| |||||||| Sbjct: 236 caggcccaaaaatgacagcgttccacagcatgatgttgtt 197
>gb|BC076409.1| Danio rerio zgc:100921, mRNA (cDNA clone MGC:100921 IMAGE:7145326), complete cds Length = 2065 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Minus Query: 444 cagggccaaaaatcacagcattccacagcattatgttgtt 483 |||| |||||||| ||||| ||||||||||| |||||||| Sbjct: 236 caggcccaaaaatgacagcgttccacagcatgatgttgtt 197
>gb|U04307.1|AH005393S5 Rattus norvegicus 14 kDa ubiquitin conjugating enzyme gene, exon 5, partial cds Length = 168 Score = 44.1 bits (22), Expect = 0.44 Identities = 34/38 (89%) Strand = Plus / Minus Query: 293 ttctgtaggatatctaagcatatgcttccatcagcata 330 ||||| ||||| |||||||||||||| || |||||||| Sbjct: 77 ttctgcaggatgtctaagcatatgctgccgtcagcata 40
>emb|AJ718893.1| Nicotiana tabacum cDNA-AFLP-fragment BSTC22-4-130, cultivar Bright Yellow 2 Length = 76 Score = 44.1 bits (22), Expect = 0.44 Identities = 44/50 (88%), Gaps = 1/50 (2%) Strand = Plus / Minus Query: 438 tatcatcagggccaaaaatcac-agcattccacagcattatgttgttgtc 486 ||||||||||||| ||||| || |||||||| |||||||| |||||||| Sbjct: 52 tatcatcagggccgaaaatgacgtgcattccatagcattatattgttgtc 3
>gb|BC074715.1| Xenopus tropicalis MGC69378 protein, mRNA (cDNA clone MGC:69378 IMAGE:5335213), complete cds Length = 1996 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 443 tcagggccaaaaatcacagcattccacagcattatgttgtt 483 ||||| ||||| || || |||||||||| |||||||||||| Sbjct: 327 tcaggtccaaatattactgcattccacaccattatgttgtt 287
>gb|BC026053.1| Mus musculus ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae), mRNA (cDNA clone MGC:13793 IMAGE:4012075), complete cds Length = 1744 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 371 ggtggcttattaggatattcttcattgaa 399 ||||||||||||||||| |||||| |||| Sbjct: 321 ggtggcttattaggatactcttcagtgaa 293
>ref|NM_001013933.1| Rattus norvegicus ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae) (Ube2a), mRNA Length = 1737 Score = 42.1 bits (21), Expect = 1.7 Identities = 72/89 (80%) Strand = Plus / Minus Query: 311 catatgcttccatcagcataaatgttagggtgaaacatccgagaaataaaccgaactgtt 370 ||||| || ||||| ||||| | ||||||||| |||||| ||| | ||| | ||| || Sbjct: 431 catatactaccatctgcatagacgttagggtggaacatcttagacacaaatctaacagta 372 Query: 371 ggtggcttattaggatattcttcattgaa 399 ||||| ||||| |||||||||||| |||| Sbjct: 371 ggtggtttatttggatattcttcagtgaa 343
>gb|AF089812.1| Mus musculus ubiquitin-conjugating enzyme HR6A mRNA, complete cds Length = 1647 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 371 ggtggcttattaggatattcttcattgaa 399 ||||||||||||||||| |||||| |||| Sbjct: 331 ggtggcttattaggatactcttcagtgaa 303
>ref|NM_019668.2| Mus musculus ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae) (Ube2a), mRNA Length = 1744 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 371 ggtggcttattaggatattcttcattgaa 399 ||||||||||||||||| |||||| |||| Sbjct: 321 ggtggcttattaggatactcttcagtgaa 293
>gb|BC059970.1| Xenopus laevis hypothetical protein MGC68540, mRNA (cDNA clone MGC:68540 IMAGE:4031136), complete cds Length = 1906 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 443 tcagggccaaaaatcacagcattccacagcattatgttgtt 483 ||||| ||||| || || |||||||||| |||||||||||| Sbjct: 294 tcaggtccaaatattactgcattccacaccattatgttgtt 254
>gb|BC079353.1| Rattus norvegicus ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae), mRNA (cDNA clone MGC:94810 IMAGE:7108236), complete cds Length = 1737 Score = 42.1 bits (21), Expect = 1.7 Identities = 72/89 (80%) Strand = Plus / Minus Query: 311 catatgcttccatcagcataaatgttagggtgaaacatccgagaaataaaccgaactgtt 370 ||||| || ||||| ||||| | ||||||||| |||||| ||| | ||| | ||| || Sbjct: 431 catatactaccatctgcatagacgttagggtggaacatcttagacacaaatctaacagta 372 Query: 371 ggtggcttattaggatattcttcattgaa 399 ||||| ||||| |||||||||||| |||| Sbjct: 371 ggtggtttatttggatattcttcagtgaa 343
>gb|U04306.1|AH005393S4 Rattus norvegicus 14 kDa ubiquitin conjugating enzyme gene, exon 4, partial cds Length = 176 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 358 aaaccgaactgttggtggcttattaggatattcttca 394 ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 108 aaacctaacggttggtggtttatttggatattcttca 72
>dbj|AK133723.1| Mus musculus 6 days neonate head cDNA, RIKEN full-length enriched library, clone:5430434L20 product:ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae), full insert sequence Length = 1665 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 371 ggtggcttattaggatattcttcattgaa 399 ||||||||||||||||| |||||| |||| Sbjct: 332 ggtggcttattaggatactcttcagtgaa 304
>dbj|AK150417.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830007D01 product:ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae), full insert sequence Length = 1637 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 371 ggtggcttattaggatattcttcattgaa 399 ||||||||||||||||| |||||| |||| Sbjct: 306 ggtggcttattaggatactcttcagtgaa 278
>dbj|AK153327.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830138O09 product:ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae), full insert sequence Length = 1637 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 371 ggtggcttattaggatattcttcattgaa 399 ||||||||||||||||| |||||| |||| Sbjct: 306 ggtggcttattaggatactcttcagtgaa 278
>gb|AF383148.1|AF383148 Mus musculus ubiquitin-conjugating enzyme HR6A mRNA, complete cds Length = 1647 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 371 ggtggcttattaggatattcttcattgaa 399 ||||||||||||||||| |||||| |||| Sbjct: 331 ggtggcttattaggatactcttcagtgaa 303
>dbj|AK164074.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430050D09 product:ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae), full insert sequence Length = 1664 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 371 ggtggcttattaggatattcttcattgaa 399 ||||||||||||||||| |||||| |||| Sbjct: 332 ggtggcttattaggatactcttcagtgaa 304
>dbj|AK163966.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330016D11 product:ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae), full insert sequence Length = 698 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 371 ggtggcttattaggatattcttcattgaa 399 ||||||||||||||||| |||||| |||| Sbjct: 358 ggtggcttattaggatactcttcagtgaa 330
>dbj|AK160545.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410024M07 product:ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae), full insert sequence Length = 697 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 371 ggtggcttattaggatattcttcattgaa 399 ||||||||||||||||| |||||| |||| Sbjct: 330 ggtggcttattaggatactcttcagtgaa 302
>dbj|AK160538.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410013I09 product:ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae), full insert sequence Length = 688 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 371 ggtggcttattaggatattcttcattgaa 399 ||||||||||||||||| |||||| |||| Sbjct: 332 ggtggcttattaggatactcttcagtgaa 304
>dbj|AK160527.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2400007G23 product:ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae), full insert sequence Length = 1652 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 371 ggtggcttattaggatattcttcattgaa 399 ||||||||||||||||| |||||| |||| Sbjct: 318 ggtggcttattaggatactcttcagtgaa 290
>gb|AC154816.2| Mus musculus BAC clone RP24-534N1 from chromosome 13, complete sequence Length = 155476 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 292 attctgtaggatatctaagca 312 ||||||||||||||||||||| Sbjct: 22839 attctgtaggatatctaagca 22819
>ref|NM_001004868.1| Xenopus tropicalis MGC69378 protein (MGC69378), mRNA Length = 1957 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 443 tcagggccaaaaatcacagcattccacagcattatgttgtt 483 ||||| ||||| || || |||||||||| |||||||||||| Sbjct: 288 tcaggtccaaatattactgcattccacaccattatgttgtt 248
>dbj|AB189024.1| Plutella xylostella gene for Cu/Zn superoxide dismutase, complete cds Length = 1138 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 atcagcataaatgttagggtg 342 ||||||||||||||||||||| Sbjct: 620 atcagcataaatgttagggtg 640
>emb|Z72580.1|SCYGL058W S.cerevisiae chromosome VII reading frame ORF YGL058w Length = 1405 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 371 ggtggcttattaggatattcttcat 395 ||||||||||| ||||||||||||| Sbjct: 628 ggtggcttattgggatattcttcat 604
>emb|CR761288.2| Xenopus tropicalis finished cDNA, clone TEgg106m12 Length = 1799 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 443 tcagggccaaaaatcacagcattccacagcattatgttgtt 483 ||||| ||||| || || |||||||||| |||||||||||| Sbjct: 190 tcaggtccaaatattactgcattccacaccattatgttgtt 150
>emb|AJ872272.1| Thermotoga sp. KOL6 16S rRNA gene, 23S rRNA gene, 5S rRNA gene, ahcY gene (partial), topG gene, hppa gene, acp gene, ORF5, ORF6, priA gene, ORF8, ORF9, ORF10, ORF11, ORF12, mrsA gene, ORF14, rrp2 gene; fsr gene, ORF17, ORF18, ORF21, ORF22, ORF23, ORF24, gppA gene ORF26, ORF27, clpA gene, tRNA-Ala gene, tRNA-Arg gene, tRNA-His gene, tRNA-Arg gene, tRNA-Gly gene, IGS, ITS1 and ITS2, strain KOL6 Length = 37534 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 gctgtttcaggtggtaaagac 42 ||||||||||||||||||||| Sbjct: 32871 gctgtttcaggtggtaaagac 32851
>emb|AL450399.16| Mouse DNA sequence from clone RP23-286I5 on chromosome X, complete sequence Length = 207922 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 371 ggtggcttattaggatattcttcattgaa 399 ||||||||||||||||| |||||| |||| Sbjct: 92084 ggtggcttattaggatactcttcagtgaa 92056
>gb|K02962.1|YSCRAD6 Yeast (S.cerevisiae) RAD6 gene, complete cds Length = 1432 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 371 ggtggcttattaggatattcttcat 395 ||||||||||| ||||||||||||| Sbjct: 646 ggtggcttattgggatattcttcat 622
>gb|BC042021.1| Homo sapiens cDNA clone IMAGE:5312200 Length = 2679 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 aactgttggtggcttattaggatattcttcattgaa 399 |||||| ||||| ||||| |||||||||||| |||| Sbjct: 1232 aactgtaggtggtttatttggatattcttcagtgaa 1197
>gb|BC053256.1| Danio rerio ubiquitin-conjugating enzyme E2A (RAD6 homolog), mRNA (cDNA clone MGC:64109 IMAGE:6795152), complete cds Length = 1626 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 358 aaaccgaactgttggtggcttattaggatattcttc 393 |||||||||||| || || || |||||||||||||| Sbjct: 340 aaaccgaactgtaggaggtttgttaggatattcttc 305
>gb|U80028.1| Caenorhabditis elegans cosmid C44C3, complete sequence Length = 27471 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 54 atttcagttacaagcattttgata 77 ||||||||| |||||||||||||| Sbjct: 19318 atttcagtttcaagcattttgata 19295
>gb|AC007589.8| Drosophila melanogaster clone BACR20D10, complete sequence Length = 164712 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 ccaaaaatcacagcattcca 468 |||||||||||||||||||| Sbjct: 13684 ccaaaaatcacagcattcca 13703
>gb|AC009537.6| Drosophila melanogaster clone BACR11M01, complete sequence Length = 160712 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 ccaaaaatcacagcattcca 468 |||||||||||||||||||| Sbjct: 141174 ccaaaaatcacagcattcca 141193
>ref|XM_864331.1| PREDICTED: Bos taurus ubiquitin-conjugating enzyme E2A (RAD6 homolog), transcript variant 1 (UBE2A), mRNA Length = 459 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 368 gttggtggcttattaggatattcttcattgaa 399 |||||||||||||| |||||||| ||| |||| Sbjct: 206 gttggtggcttatttggatattcctcagtgaa 175
>gb|BC010175.2| Homo sapiens ubiquitin-conjugating enzyme E2A (RAD6 homolog), transcript variant 1, mRNA (cDNA clone MGC:20175 IMAGE:3051041), complete cds Length = 728 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 aactgttggtggcttattaggatattcttcattgaa 399 |||||| ||||| ||||| |||||||||||| |||| Sbjct: 348 aactgtaggtggtttatttggatattcttcagtgaa 313
>ref|XM_539512.2| PREDICTED: Canis familiaris similar to dpy-19-like 1, like (LOC482395), mRNA Length = 1962 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 ttcagttacaagcattttgataca 79 |||||||||||| ||||||||||| Sbjct: 1069 ttcagttacaaggattttgataca 1092
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 ctggagagtcagcttaaacg 419 |||||||||||||||||||| Sbjct: 2771043 ctggagagtcagcttaaacg 2771062
>ref|NM_181777.1| Homo sapiens ubiquitin-conjugating enzyme E2A (RAD6 homolog) (UBE2A), transcript variant 3, mRNA Length = 2678 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 aactgttggtggcttattaggatattcttcattgaa 399 |||||| ||||| ||||| |||||||||||| |||| Sbjct: 1231 aactgtaggtggtttatttggatattcttcagtgaa 1196
>ref|NM_003336.2| Homo sapiens ubiquitin-conjugating enzyme E2A (RAD6 homolog) (UBE2A), transcript variant 1, mRNA Length = 1799 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 aactgttggtggcttattaggatattcttcattgaa 399 |||||| ||||| ||||| |||||||||||| |||| Sbjct: 386 aactgtaggtggtttatttggatattcttcagtgaa 351
>gb|AC105515.5| Rattus norvegicus 14 BAC CH230-13H11 (Children's Hospital Oakland Research Institute) complete sequence Length = 221805 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 ctggagagtcagcttaaacg 419 |||||||||||||||||||| Sbjct: 156577 ctggagagtcagcttaaacg 156558
>emb|AL157878.11| Human DNA sequence from clone RP11-51B13 on chromosome 13q31.1-32.1 Contains 2 novel genes, complete sequence Length = 118873 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 atgcaacaaagcaagttgctgttt 28 |||||||||| ||||||||||||| Sbjct: 96317 atgcaacaaaacaagttgctgttt 96340
>gb|AY307124.1| Escherichia coli strain BEN 2332 EngA (engA) gene, partial cds; YfgJ (yfgJ), Aec1 precursor (aec1), Aec2 precursor (aec2), Aec3 (aec3), and Aec4 precursor (aec4) genes, complete cds; and XseA (xseA) gene, partial cds Length = 13997 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 ctggagagtcagcttaaacg 419 |||||||||||||||||||| Sbjct: 13462 ctggagagtcagcttaaacg 13443
>ref|XM_964597.1| PREDICTED: Tribolium castaneum similar to RNA binding motif protein 25 (LOC658188), mRNA Length = 2640 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 gcgcccccgcttatgcccgc 511 |||||||||||||||||||| Sbjct: 70 gcgcccccgcttatgcccgc 89
>emb|AJ843120.1| Plantago major mRNA for Ubiquitin-conjugating enzyme (ubc1 gene) Length = 751 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 284 ctccactgattctgtaggatatctaagcatat 315 |||||||||| || ||||||||||||||||| Sbjct: 382 ctccactgatccttaaggatatctaagcatat 351
>emb|CR622728.1| full-length cDNA clone CS0DI011YC18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1724 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 aactgttggtggcttattaggatattcttcattgaa 399 |||||| ||||| ||||| |||||||||||| |||| Sbjct: 343 aactgtaggtggtttatttggatattcttcagtgaa 308
>emb|CR621348.1| full-length cDNA clone CS0DI059YK09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1671 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 aactgttggtggcttattaggatattcttcattgaa 399 |||||| ||||| ||||| |||||||||||| |||| Sbjct: 264 aactgtaggtggtttatttggatattcttcagtgaa 229
>emb|CR616784.1| full-length cDNA clone CS0DI032YI24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1739 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 aactgttggtggcttattaggatattcttcattgaa 399 |||||| ||||| ||||| |||||||||||| |||| Sbjct: 336 aactgtaggtggtttatttggatattcttcagtgaa 301
>emb|CR614696.1| full-length cDNA clone CS0DE004YD11 of Placenta of Homo sapiens (human) Length = 1524 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 aactgttggtggcttattaggatattcttcattgaa 399 |||||| ||||| ||||| |||||||||||| |||| Sbjct: 161 aactgtaggtggtttatttggatattcttcagtgaa 126
>emb|CR614387.1| full-length cDNA clone CS0DI023YH23 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1565 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 aactgttggtggcttattaggatattcttcattgaa 399 |||||| ||||| ||||| |||||||||||| |||| Sbjct: 174 aactgtaggtggtttatttggatattcttcagtgaa 139
>emb|CR608682.1| full-length cDNA clone CS0DK005YH04 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1752 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 aactgttggtggcttattaggatattcttcattgaa 399 |||||| ||||| ||||| |||||||||||| |||| Sbjct: 343 aactgtaggtggtttatttggatattcttcagtgaa 308
>emb|CR603049.1| full-length cDNA clone CS0DI041YJ10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1724 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 aactgttggtggcttattaggatattcttcattgaa 399 |||||| ||||| ||||| |||||||||||| |||| Sbjct: 343 aactgtaggtggtttatttggatattcttcagtgaa 308
>emb|CR600075.1| full-length cDNA clone CS0DI082YO05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1741 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 aactgttggtggcttattaggatattcttcattgaa 399 |||||| ||||| ||||| |||||||||||| |||| Sbjct: 349 aactgtaggtggtttatttggatattcttcagtgaa 314
>emb|CR598456.1| full-length cDNA clone CS0DI015YM05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1734 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 aactgttggtggcttattaggatattcttcattgaa 399 |||||| ||||| ||||| |||||||||||| |||| Sbjct: 343 aactgtaggtggtttatttggatattcttcagtgaa 308
>emb|CR598158.1| full-length cDNA clone CS0DC026YH11 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1761 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 aactgttggtggcttattaggatattcttcattgaa 399 |||||| ||||| ||||| |||||||||||| |||| Sbjct: 349 aactgtaggtggtttatttggatattcttcagtgaa 314
>emb|CR592668.1| full-length cDNA clone CS0DJ003YC14 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1773 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 aactgttggtggcttattaggatattcttcattgaa 399 |||||| ||||| ||||| |||||||||||| |||| Sbjct: 408 aactgtaggtggtttatttggatattcttcagtgaa 373
>ref|NM_079506.2| Drosophila melanogaster Ubiquitin conjugating enzyme CG2013-RA (UbcD6), mRNA Length = 769 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 ccaaaaatcacagcattcca 468 |||||||||||||||||||| Sbjct: 313 ccaaaaatcacagcattcca 294
>gb|AY064695.1| Mus musculus ubiquitin-conjugating enzyme (Mhr6a) gene, exons 4, 5, and 6 and partial cds Length = 1419 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 371 ggtggcttattaggatattcttca 394 ||||||||||||||||| |||||| Sbjct: 26 ggtggcttattaggatactcttca 3
>emb|BX247946.6| Zebrafish DNA sequence from clone CH211-231B5 in linkage group 14, complete sequence Length = 156559 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 358 aaaccgaactgttggtggcttattaggatattcttc 393 |||||||||||| || || || |||||||||||||| Sbjct: 142390 aaaccgaactgtaggaggtttgttaggatattcttc 142355
>gb|AF419316.1|AF419316 Bos taurus RAD6-like protein HR6A (BHR6A) mRNA, partial cds Length = 372 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 368 gttggtggcttattaggatattcttcattgaa 399 |||||||||||||| |||||||| ||| |||| Sbjct: 176 gttggtggcttatttggatattcctcagtgaa 145
>gb|BC102100.1| Bos taurus cDNA clone MGC:127256 IMAGE:7946441, complete cds Length = 1441 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 368 gttggtggcttattaggatattcttcattgaa 399 |||||||||||||| |||||||| ||| |||| Sbjct: 347 gttggtggcttatttggatattcctcagtgaa 316
>ref|NM_071410.1| Caenorhabditis elegans Serpentine Receptor, class W family member (srw-118) (srw-118) mRNA, complete cds Length = 1137 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 atttcagttacaagcattttgata 77 ||||||||| |||||||||||||| Sbjct: 133 atttcagtttcaagcattttgata 156
>gb|DQ068065.1| Homo sapiens ubiquitin-conjugating enzyme E2A (RAD6 homolog) (UBE2A) gene, complete cds Length = 12442 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 aactgttggtggcttattaggatattcttcattgaa 399 |||||| ||||| ||||| |||||||||||| |||| Sbjct: 8300 aactgtaggtggtttatttggatattcttcagtgaa 8265
>gb|AC017087.5|AC017087 Homo sapiens BAC clone RP11-495H13 from 4, complete sequence Length = 171745 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 gcaacaaagcaagttgctgtttca 30 ||||||||||||| |||||||||| Sbjct: 21781 gcaacaaagcaagatgctgtttca 21758
>ref|XM_624237.1| PREDICTED: Apis mellifera similar to ENSANGP00000017916 (LOC551852), mRNA Length = 791 Score = 40.1 bits (20), Expect = 6.9 Identities = 86/108 (79%) Strand = Plus / Minus Query: 242 gactggatggatgtaagtatagcagctacatcatatattgggctccactgattctgtagg 301 ||||| |||||||| | ||||||| |||||||| | |||||||| ||||||||| Sbjct: 637 gactgtatggatgttaaaatagcagacacatcataagtagggctccaacgattctgtaat 578 Query: 302 atatctaagcatatgcttccatcagcataaatgttagggtgaaacatc 349 || || || || |||| |||||||||||| | |||||||| |||||| Sbjct: 577 atgtccaaacagatgcctccatcagcatatacattagggtggaacatc 530
>dbj|AK223064.1| Homo sapiens mRNA for ubiquitin-conjugating enzyme E2A isoform 1 variant, clone: KAT01535 Length = 1787 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 aactgttggtggcttattaggatattcttcattgaa 399 |||||| ||||| ||||| |||||||||||| |||| Sbjct: 354 aactgtaggtggtttatttggatattcttcagtgaa 319
>gb|AC007363.3| Homo sapiens BAC clone RP11-294L11 from 2, complete sequence Length = 198628 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 caagcattttgatacagaga 83 |||||||||||||||||||| Sbjct: 113211 caagcattttgatacagaga 113192
>gb|BT003481.1| Drosophila melanogaster RE56673 full insert cDNA Length = 2186 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 ccaaaaatcacagcattcca 468 |||||||||||||||||||| Sbjct: 313 ccaaaaatcacagcattcca 294
>emb|AJ234842.1|HVU234842 Hordeum vulgare genomic DNA fragment; clone MWG2217 Length = 402 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 464 ttccacagcattatgttgttgtcctgcggcgc 495 ||||| ||||| ||||||||||| |||||||| Sbjct: 59 ttccagagcatgatgttgttgtcgtgcggcgc 28
>gb|AF132075.1|AF132075 Bos taurus RAD6 homolog (BHR6A) gene, partial cds Length = 372 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 368 gttggtggcttattaggatattcttcattgaa 399 |||||||||||||| |||||||| ||| |||| Sbjct: 176 gttggtggcttatttggatattcctcagtgaa 145
>gb|AF132074.1|AF132074 Equus caballus RAD6 homolog (EHR6A) gene, partial cds Length = 378 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 368 gttggtggcttattaggatattcttcattgaa 399 |||||||||||||| |||||||| ||| |||| Sbjct: 179 gttggtggcttatttggatattcctcagtgaa 148
>gb|AC174827.3| Cavia porcellus clone CH234-477P24, complete sequence Length = 156330 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 attcttcattgaactggaga 406 |||||||||||||||||||| Sbjct: 21910 attcttcattgaactggaga 21929
>gb|AC004913.2|AC004913 Homo sapiens clone DJ0876A24, complete sequence Length = 98870 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 aactgttggtggcttattaggatattcttcattgaa 399 |||||| ||||| ||||| |||||||||||| |||| Sbjct: 20319 aactgtaggtggtttatttggatattcttcagtgaa 20284
>ref|NM_201273.1| Danio rerio ubiquitin-conjugating enzyme E2A (RAD6 homolog) (ube2a), mRNA Length = 1626 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 358 aaaccgaactgttggtggcttattaggatattcttc 393 |||||||||||| || || || |||||||||||||| Sbjct: 340 aaaccgaactgtaggaggtttgttaggatattcttc 305
>gb|AE003604.4| Drosophila melanogaster chromosome 3R, section 4 of 118 of the complete sequence Length = 303434 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 ccaaaaatcacagcattcca 468 |||||||||||||||||||| Sbjct: 108665 ccaaaaatcacagcattcca 108684
>emb|AL590151.8| Zebrafish DNA sequence from clone RP71-46J2 in linkage group 14, complete sequence Length = 137129 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 358 aaaccgaactgttggtggcttattaggatattcttc 393 |||||||||||| || || || |||||||||||||| Sbjct: 48524 aaaccgaactgtaggaggtttgttaggatattcttc 48489
>gb|M74524.1|HUMHHR6A Human HHR6A (yeast RAD 6 homologue) mRNA, complete cds Length = 1743 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 aactgttggtggcttattaggatattcttcattgaa 399 |||||| ||||| ||||| |||||||||||| |||| Sbjct: 330 aactgtaggtggtttatttggatattcttcagtgaa 295
>gb|M64435.1|DRO6DHR2 D.melanogaster homolog of RAD6 (DHR6) gene, exons 2 and 3 Length = 2378 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 ccaaaaatcacagcattcca 468 |||||||||||||||||||| Sbjct: 336 ccaaaaatcacagcattcca 317
>gb|M63792.1|DRO6DHR D.melanogaster homolog of RAD6 (DHR6) mRNA, complete cds Length = 2090 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 ccaaaaatcacagcattcca 468 |||||||||||||||||||| Sbjct: 213 ccaaaaatcacagcattcca 194 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,797,128 Number of Sequences: 3902068 Number of extensions: 3797128 Number of successful extensions: 62624 Number of sequences better than 10.0: 223 Number of HSP's better than 10.0 without gapping: 222 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 62059 Number of HSP's gapped (non-prelim): 533 length of query: 511 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 488 effective length of database: 17,143,297,704 effective search space: 8365929279552 effective search space used: 8365929279552 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
