ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd21e23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY105049.1| Zea mays PCO112338 mRNA sequence 363 4e-97
2gb|BT017352.1| Zea mays clone EL01N0323H03.c mRNA sequence 339 6e-90
3ref|XM_479475.1| Oryza sativa (japonica cultivar-group), mRNA 317 2e-83
4ref|XM_507411.1| PREDICTED Oryza sativa (japonica cultivar-group... 317 2e-83
5ref|XM_506559.2| PREDICTED Oryza sativa (japonica cultivar-group... 317 2e-83
6dbj|AK104794.1| Oryza sativa (japonica cultivar-group) cDNA clon... 317 2e-83
7dbj|AK103678.1| Oryza sativa (japonica cultivar-group) cDNA clon... 317 2e-83
8gb|BT024045.1| Zea mays clone EL01N0430D01 mRNA sequence 317 2e-83
9dbj|AK060100.1| Oryza sativa (japonica cultivar-group) cDNA clon... 317 2e-83
10dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
11dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
12emb|BX831560.1|CNS09ZPB Arabidopsis thaliana Full-length cDNA Co... 133 7e-28
13ref|NM_120719.2| Arabidopsis thaliana structural constituent of ... 127 4e-26
14gb|AY114052.1| Arabidopsis thaliana unknown protein (At5g06360) ... 127 4e-26
15gb|AY059725.1| Arabidopsis thaliana unknown protein (At5g06360) ... 127 4e-26
16emb|BX831075.1|CNS09ZF5 Arabidopsis thaliana Full-length cDNA Co... 127 4e-26
17gb|AY085454.1| Arabidopsis thaliana clone 15229 mRNA, complete s... 127 4e-26
18dbj|AP006541.1| Lotus japonicus genomic DNA, chromosome 2, clone... 105 1e-19
19dbj|AP006538.1| Lotus japonicus genomic DNA, chromosome 2, clone... 105 1e-19
20emb|BX831803.1|CNS09ZT9 Arabidopsis thaliana Full-length cDNA Co... 90 9e-15
21ref|XM_950402.1| Theileria annulata strain Ankara tgf beta-induc... 72 2e-09
22ref|XM_778150.1| PREDICTED: Strongylocentrotus purpuratus simila... 72 2e-09
23dbj|AB006700.2| Arabidopsis thaliana genomic DNA, chromosome 5, ... 72 2e-09
24emb|BX832734.1|CNS09ZR3 Arabidopsis thaliana Full-length cDNA Co... 70 8e-09
25gb|AY706155.1| Aplysia californica TGF beta-inducible nuclear pr... 68 3e-08
26gb|DQ424947.1| Bombyx mori TGF beta-inducible nuclear protein 1 ... 68 3e-08
27gb|DQ311226.1| Bombyx mori hairy cell leukemia protein 1 mRNA, c... 68 3e-08
28ref|XM_381311.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 62 2e-06
29gb|BC073255.1| Xenopus laevis cDNA clone MGC:80606 IMAGE:5506003... 58 3e-05
30gb|AY281348.1| Xenopus laevis HMG-box protein HMG2L1 (HMG2L1) mR... 58 3e-05
31gb|BC046083.1| Danio rerio zgc:56334, mRNA (cDNA clone MGC:56334... 58 3e-05
32ref|NM_199568.1| Danio rerio zgc:56334 (zgc:56334), mRNA 58 3e-05
33ref|XM_779898.1| PREDICTED: Strongylocentrotus purpuratus simila... 56 1e-04
34emb|X69119.1|DMUQ80FP D.melanogaster gene for ubiquitin-80 fusio... 56 1e-04
35gb|AY118472.1| Drosophila melanogaster GM13959 full insert cDNA 56 1e-04
36ref|NM_058031.4| Drosophila melanogaster Intronic Protein 259 CG... 56 1e-04
37emb|BX832733.1|CNS09ZQF Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
38gb|AC007451.1|AC007451 Drosophila melanogaster, chromosome 2L, r... 56 1e-04
39gb|AE003628.2| Drosophila melanogaster chromosome 2L, section 37... 56 1e-04
40gb|U56257.1|DMU56257 Drosophila melanogaster intronic protein 25... 56 1e-04
41ref|XM_623623.1| PREDICTED: Apis mellifera similar to CG5277-PA ... 52 0.002
42emb|AM260497.1| Platanus acerifolia partial mRNA for TGF-beta in... 52 0.002
43gb|AY438655.1| Quercus robur TGF-beta inducible protein gene, pa... 50 0.008
44ref|XM_711546.1| Candida albicans SC5314 putative ribosome matur... 44 0.47
45ref|XM_710995.1| Candida albicans SC5314 putative ribosome matur... 44 0.47
46ref|XM_813522.1| Trypanosoma cruzi strain CL Brener 40S ribosoma... 44 0.47
47ref|XM_801572.1| Trypanosoma cruzi strain CL Brener 40S ribosoma... 44 0.47
48dbj|AK115831.1| Ciona intestinalis cDNA, clone:cilv028h09, full ... 44 0.47
49gb|U20260.1|GMU20260 Glycine max glutamate 1-semialdehyde aminot... 44 0.47
50dbj|AP004484.1| Lotus japonicus genomic DNA, chromosome 1, clone... 44 0.47
51gb|L12453.1|SOYGSA Soybean glutamate 1-semialdehyde aminotransfe... 44 0.47
52emb|AL117183.1|SPCP1E11 S.pombe chromosome III p1 clone p1E11 42 1.8
53emb|AJ719405.1| Gallus gallus mRNA for hypothetical protein, clo... 42 1.8
54ref|NM_001006579.1| Gallus gallus similar to TGF beta-inducible ... 42 1.8
55emb|CR523694.1| Gallus gallus finished cDNA, clone ChEST23p6 42 1.8
56emb|CR388679.1| Gallus gallus finished cDNA, clone ChEST387a6 42 1.8
57ref|NM_001023548.1| Schizosaccharomyces pombe 972h- hypothetical... 42 1.8
58gb|AC005699.9|AC005699 Homo sapiens chromosome 4 clone C0473M13 ... 42 1.8
59emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 42 1.8
60gb|AC164111.4| Mus musculus BAC clone RP23-267E11 from chromosom... 40 7.3
61ref|NM_001031517.1| Gallus gallus ankyrin repeat and SOCS box-co... 40 7.3
62gb|AC138741.7| Mus musculus chromosome 1, clone RP24-260D21, com... 40 7.3
63gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.3
64gb|U80846.1| Caenorhabditis elegans cosmid K06A9, complete sequence 40 7.3
65gb|AC124563.4| Mus musculus BAC clone RP23-206B15 from chromosom... 40 7.3
66ref|XM_646180.1| Entamoeba histolytica HM-1:IMSS conserved hypot... 40 7.3
67emb|AL450345.6| Human DNA sequence from clone RP11-300M24 on chr... 40 7.3
68emb|AL096701.14|HSA247I13 Human DNA sequence from clone RP11-247... 40 7.3
69emb|AJ720837.1| Gallus gallus mRNA for hypothetical protein, clo... 40 7.3
70gb|AC161624.4| Pan troglodytes BAC clone CH251-149E7 from chromo... 40 7.3
71gb|AC079857.5| Homo sapiens BAC clone RP11-589E1 from 4, complet... 40 7.3
72gb|AC156796.2| Mus musculus BAC clone RP24-90N20 from chromosome... 40 7.3
73dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
74emb|AL136419.3|CNS01DW7 Human chromosome 14 DNA sequence BAC R-7... 40 7.3

>gb|AY105049.1| Zea mays PCO112338 mRNA sequence
          Length = 1250

 Score =  363 bits (183), Expect = 4e-97
 Identities = 279/310 (90%), Gaps = 1/310 (0%)
 Strand = Plus / Minus

                                                                        
Query: 228  acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 287
            |||| ||||| |||||||||||||| ||||||||||||||||| |||||||| ||||| |
Sbjct: 1027 acactagcaaaacagcattgatacacccatcattctccgggttgtttgtaacttgagcat 968

                                                                        
Query: 288  atttgccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 347
            |||| |||||||||||||||||||| || ||||| |||||||| ||||| ||||| ||||
Sbjct: 967  atttcccccaaacaacttttccagcgggagttaccagaccaagctcactgacatttacct 908

                                                                        
Query: 348  cgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttt 407
            | || ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 907  caatgattgttccccttgtcataacaccaagagaagtgtacattggaccatttgggtttt 848

                                                                        
Query: 408  tcttcacagaaattatgtcgaggttgaacgtacattttcagttcanggtgagtcacatga 467
            ||||||||||||||||||| |||||||| || ||  ||||| ||  ||||||||||||||
Sbjct: 847  tcttcacagaaattatgtcaaggttgaaagtgca-cttcagctctgggtgagtcacatga 789

                                                                        
Query: 468  gccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttcctt 527
            || |||||||||||||||||||| || || ||||||| ||||||||||||||| ||||||
Sbjct: 788  gctttggtgaaacgcagaccagttggccgaatgaaccgctcatactttggtggtttcctt 729

                      
Query: 528  gtaaatccag 537
            ||||||||||
Sbjct: 728  gtaaatccag 719



to top

>gb|BT017352.1| Zea mays clone EL01N0323H03.c mRNA sequence
          Length = 1151

 Score =  339 bits (171), Expect = 6e-90
 Identities = 276/310 (89%), Gaps = 1/310 (0%)
 Strand = Plus / Minus

                                                                       
Query: 228 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 287
           |||| ||||| || ||||||||||||||||| ||||||||||| |||||||| ||||| |
Sbjct: 936 acactagcaaaactgcattgatacagccatcgttctccgggttgtttgtaacttgagcat 877

                                                                       
Query: 288 atttgccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 347
           |||| |||||||||||||||||||| || ||||| |||||||| ||||| ||||| ||||
Sbjct: 876 atttcccccaaacaacttttccagcgggagttaccagaccaagctcactgacatttacct 817

                                                                       
Query: 348 cgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttt 407
           | || || |||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 816 caatgatcgttccccttgtcataacaccaagagaagtgtacattggaccatttgggtttt 757

                                                                       
Query: 408 tcttcacagaaattatgtcgaggttgaacgtacattttcagttcanggtgagtcacatga 467
           ||||||||||||||||||| |||||||| || ||  ||||| ||  ||||||||||||||
Sbjct: 756 tcttcacagaaattatgtcaaggttgaaagtgca-cttcagctctgggtgagtcacatga 698

                                                                       
Query: 468 gccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttcctt 527
           || |||||||||||||||||||| || || |||||||  |||||||||||||| ||||||
Sbjct: 697 gctttggtgaaacgcagaccagttggccgaatgaaccgttcatactttggtggtttcctt 638

                     
Query: 528 gtaaatccag 537
           ||||||||||
Sbjct: 637 gtaaatccag 628



to top

>ref|XM_479475.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1039

 Score =  317 bits (160), Expect = 2e-83
 Identities = 274/311 (88%), Gaps = 1/311 (0%)
 Strand = Plus / Minus

                                                                       
Query: 228 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 287
           ||||||| ||||||||||||||||||||||||||||| ||||| |||||||| || || |
Sbjct: 832 acacgagtaagacagcattgatacagccatcattctctgggttgtttgtaacttgtgcat 773

                                                                       
Query: 288 atttgccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 347
           |||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 772 atttaccccaaacaacttttccagcaggggttaccagaccaagttcactaacgttcacct 713

                                                                       
Query: 348 cgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttt 407
           | || || |||||||| |||| ||||||||||| || ||||||| |||| ||||||||||
Sbjct: 712 caatgatagttccccttgtcaaaacaccaagagtagagtacatttgaccatttgggtttt 653

                                                                       
Query: 408 tcttcacagaaattatgtcgaggttgaacgtacattttcagttcanggtgagtcacatga 467
           ||||||||||||||||||| |||||||| ||||| |||||| ||| ||||||| ||||| 
Sbjct: 652 tcttcacagaaattatgtcaaggttgaaagtaca-tttcagctcagggtgagtaacatgg 594

                                                                       
Query: 468 gccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttcctt 527
           ||||| |||||||| || ||||| || |  || ||||  |||||||||||||| ||||||
Sbjct: 593 gcctttgtgaaacgaaggccagttggcctaataaaccgttcatactttggtggtttcctt 534

                      
Query: 528 gtaaatccagg 538
           ||||| |||||
Sbjct: 533 gtaaacccagg 523



to top

>ref|XM_507411.1| PREDICTED Oryza sativa (japonica cultivar-group), P0470D12.138 mRNA
          Length = 1041

 Score =  317 bits (160), Expect = 2e-83
 Identities = 274/311 (88%), Gaps = 1/311 (0%)
 Strand = Plus / Minus

                                                                       
Query: 228 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 287
           ||||||| ||||||||||||||||||||||||||||| ||||| |||||||| || || |
Sbjct: 832 acacgagtaagacagcattgatacagccatcattctctgggttgtttgtaacttgtgcat 773

                                                                       
Query: 288 atttgccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 347
           |||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 772 atttaccccaaacaacttttccagcaggggttaccagaccaagttcactaacgttcacct 713

                                                                       
Query: 348 cgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttt 407
           | || || |||||||| |||| ||||||||||| || ||||||| |||| ||||||||||
Sbjct: 712 caatgatagttccccttgtcaaaacaccaagagtagagtacatttgaccatttgggtttt 653

                                                                       
Query: 408 tcttcacagaaattatgtcgaggttgaacgtacattttcagttcanggtgagtcacatga 467
           ||||||||||||||||||| |||||||| ||||| |||||| ||| ||||||| ||||| 
Sbjct: 652 tcttcacagaaattatgtcaaggttgaaagtaca-tttcagctcagggtgagtaacatgg 594

                                                                       
Query: 468 gccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttcctt 527
           ||||| |||||||| || ||||| || |  || ||||  |||||||||||||| ||||||
Sbjct: 593 gcctttgtgaaacgaaggccagttggcctaataaaccgttcatactttggtggtttcctt 534

                      
Query: 528 gtaaatccagg 538
           ||||| |||||
Sbjct: 533 gtaaacccagg 523



to top

>ref|XM_506559.2| PREDICTED Oryza sativa (japonica cultivar-group), P0470D12.138 mRNA
          Length = 1227

 Score =  317 bits (160), Expect = 2e-83
 Identities = 274/311 (88%), Gaps = 1/311 (0%)
 Strand = Plus / Minus

                                                                       
Query: 228 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 287
           ||||||| ||||||||||||||||||||||||||||| ||||| |||||||| || || |
Sbjct: 835 acacgagtaagacagcattgatacagccatcattctctgggttgtttgtaacttgtgcat 776

                                                                       
Query: 288 atttgccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 347
           |||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 775 atttaccccaaacaacttttccagcaggggttaccagaccaagttcactaacgttcacct 716

                                                                       
Query: 348 cgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttt 407
           | || || |||||||| |||| ||||||||||| || ||||||| |||| ||||||||||
Sbjct: 715 caatgatagttccccttgtcaaaacaccaagagtagagtacatttgaccatttgggtttt 656

                                                                       
Query: 408 tcttcacagaaattatgtcgaggttgaacgtacattttcagttcanggtgagtcacatga 467
           ||||||||||||||||||| |||||||| ||||| |||||| ||| ||||||| ||||| 
Sbjct: 655 tcttcacagaaattatgtcaaggttgaaagtaca-tttcagctcagggtgagtaacatgg 597

                                                                       
Query: 468 gccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttcctt 527
           ||||| |||||||| || ||||| || |  || ||||  |||||||||||||| ||||||
Sbjct: 596 gcctttgtgaaacgaaggccagttggcctaataaaccgttcatactttggtggtttcctt 537

                      
Query: 528 gtaaatccagg 538
           ||||| |||||
Sbjct: 536 gtaaacccagg 526



to top

>dbj|AK104794.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G01, full
           insert sequence
          Length = 1039

 Score =  317 bits (160), Expect = 2e-83
 Identities = 274/311 (88%), Gaps = 1/311 (0%)
 Strand = Plus / Minus

                                                                       
Query: 228 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 287
           ||||||| ||||||||||||||||||||||||||||| ||||| |||||||| || || |
Sbjct: 832 acacgagtaagacagcattgatacagccatcattctctgggttgtttgtaacttgtgcat 773

                                                                       
Query: 288 atttgccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 347
           |||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 772 atttaccccaaacaacttttccagcaggggttaccagaccaagttcactaacgttcacct 713

                                                                       
Query: 348 cgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttt 407
           | || || |||||||| |||| ||||||||||| || ||||||| |||| ||||||||||
Sbjct: 712 caatgatagttccccttgtcaaaacaccaagagtagagtacatttgaccatttgggtttt 653

                                                                       
Query: 408 tcttcacagaaattatgtcgaggttgaacgtacattttcagttcanggtgagtcacatga 467
           ||||||||||||||||||| |||||||| ||||| |||||| ||| ||||||| ||||| 
Sbjct: 652 tcttcacagaaattatgtcaaggttgaaagtaca-tttcagctcagggtgagtaacatgg 594

                                                                       
Query: 468 gccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttcctt 527
           ||||| |||||||| || ||||| || |  || ||||  |||||||||||||| ||||||
Sbjct: 593 gcctttgtgaaacgaaggccagttggcctaataaaccgttcatactttggtggtttcctt 534

                      
Query: 528 gtaaatccagg 538
           ||||| |||||
Sbjct: 533 gtaaacccagg 523



to top

>dbj|AK103678.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136C23, full
           insert sequence
          Length = 1225

 Score =  317 bits (160), Expect = 2e-83
 Identities = 274/311 (88%), Gaps = 1/311 (0%)
 Strand = Plus / Minus

                                                                       
Query: 228 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 287
           ||||||| ||||||||||||||||||||||||||||| ||||| |||||||| || || |
Sbjct: 833 acacgagtaagacagcattgatacagccatcattctctgggttgtttgtaacttgtgcat 774

                                                                       
Query: 288 atttgccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 347
           |||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 773 atttaccccaaacaacttttccagcaggggttaccagaccaagttcactaacgttcacct 714

                                                                       
Query: 348 cgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttt 407
           | || || |||||||| |||| ||||||||||| || ||||||| |||| ||||||||||
Sbjct: 713 caatgatagttccccttgtcaaaacaccaagagtagagtacatttgaccatttgggtttt 654

                                                                       
Query: 408 tcttcacagaaattatgtcgaggttgaacgtacattttcagttcanggtgagtcacatga 467
           ||||||||||||||||||| |||||||| ||||| |||||| ||| ||||||| ||||| 
Sbjct: 653 tcttcacagaaattatgtcaaggttgaaagtaca-tttcagctcagggtgagtaacatgg 595

                                                                       
Query: 468 gccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttcctt 527
           ||||| |||||||| || ||||| || |  || ||||  |||||||||||||| ||||||
Sbjct: 594 gcctttgtgaaacgaaggccagttggcctaataaaccgttcatactttggtggtttcctt 535

                      
Query: 528 gtaaatccagg 538
           ||||| |||||
Sbjct: 534 gtaaacccagg 524



to top

>gb|BT024045.1| Zea mays clone EL01N0430D01 mRNA sequence
          Length = 1191

 Score =  317 bits (160), Expect = 2e-83
 Identities = 276/311 (88%), Gaps = 3/311 (0%)
 Strand = Plus / Minus

                                                                       
Query: 228 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 287
           |||| ||||| |||||||||||||| ||||||||||||||||| |||||||| ||||| |
Sbjct: 940 acactagcaaaacagcattgatacacccatcattctccgggttgtttgtaacttgagcat 881

                                                                       
Query: 288 atttgccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 347
           |||| |||||||||||||||||||| || ||||| |||||||| ||||| ||||| ||||
Sbjct: 880 atttcccccaaacaacttttccagcgggagttaccagaccaagctcactgacatttacct 821

                                                                       
Query: 348 cgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttt 407
           | || |||| |||||| |||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 820 caatgattggtccccttgtcataacaccaagagaagtgtacatcggaccatttgggtttt 761

                                                                       
Query: 408 tcttcacagaaattatgtcgaggttgaacgtacattttcagttcanggtgagtcacatga 467
           ||||||||||||||||||| ||| |||| || ||  ||||||||  || |||||||||||
Sbjct: 760 tcttcacagaaattatgtcaagggtgaaagtgca-cttcagttctgggggagtcacatga 702

                                                                       
Query: 468 gcc-ttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttcct 526
           ||| |||||| |||||| |||||| ||||| ||||||| ||||||||||||||| |||||
Sbjct: 701 gcctttggtg-aacgcataccagttggtcgaatgaaccgctcatactttggtggtttcct 643

                      
Query: 527 tgtaaatccag 537
           |||||||||||
Sbjct: 642 tgtaaatccag 632



to top

>dbj|AK060100.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-H11, full
           insert sequence
          Length = 1041

 Score =  317 bits (160), Expect = 2e-83
 Identities = 274/311 (88%), Gaps = 1/311 (0%)
 Strand = Plus / Minus

                                                                       
Query: 228 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 287
           ||||||| ||||||||||||||||||||||||||||| ||||| |||||||| || || |
Sbjct: 832 acacgagtaagacagcattgatacagccatcattctctgggttgtttgtaacttgtgcat 773

                                                                       
Query: 288 atttgccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 347
           |||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 772 atttaccccaaacaacttttccagcaggggttaccagaccaagttcactaacgttcacct 713

                                                                       
Query: 348 cgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttt 407
           | || || |||||||| |||| ||||||||||| || ||||||| |||| ||||||||||
Sbjct: 712 caatgatagttccccttgtcaaaacaccaagagtagagtacatttgaccatttgggtttt 653

                                                                       
Query: 408 tcttcacagaaattatgtcgaggttgaacgtacattttcagttcanggtgagtcacatga 467
           ||||||||||||||||||| |||||||| ||||| |||||| ||| ||||||| ||||| 
Sbjct: 652 tcttcacagaaattatgtcaaggttgaaagtaca-tttcagctcagggtgagtaacatgg 594

                                                                       
Query: 468 gccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttcctt 527
           ||||| |||||||| || ||||| || |  || ||||  |||||||||||||| ||||||
Sbjct: 593 gcctttgtgaaacgaaggccagttggcctaataaaccgttcatactttggtggtttcctt 534

                      
Query: 528 gtaaatccagg 538
           ||||| |||||
Sbjct: 533 gtaaacccagg 523



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  159 bits (80), Expect = 1e-35
 Identities = 158/183 (86%), Gaps = 1/183 (0%)
 Strand = Plus / Plus

                                                                            
Query: 356      gttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttttcttcaca 415
                |||||||| |||| ||||||||||| || ||||||| |||| ||||||||||||||||||
Sbjct: 28395867 gttccccttgtcaaaacaccaagagtagagtacatttgaccatttgggtttttcttcaca 28395926

                                                                            
Query: 416      gaaattatgtcgaggttgaacgtacattttcagttcanggtgagtcacatgagccttggt 475
                ||||||||||| |||||||| ||||| |||||| ||| ||||||| ||||| ||||| ||
Sbjct: 28395927 gaaattatgtcaaggttgaaagtaca-tttcagctcagggtgagtaacatgggcctttgt 28395985

                                                                            
Query: 476      gaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttccttgtaaatcc 535
                |||||| || ||||| || |  || ||||  |||||||||||||| ||||||||||| ||
Sbjct: 28395986 gaaacgaaggccagttggcctaataaaccgttcatactttggtggtttccttgtaaaccc 28396045

                   
Query: 536      agg 538
                |||
Sbjct: 28396046 agg 28396048



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 53/55 (96%)
 Strand = Plus / Plus

                                                                       
Query: 293      ccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 347
                ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 28395523 ccccaaacaacttttccagcaggggttaccagaccaagttcactaacgttcacct 28395577



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 49/52 (94%)
 Strand = Plus / Plus

                                                                    
Query: 228      acacgagcaagacagcattgatacagccatcattctccgggttatttgtaac 279
                ||||||| ||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 28395371 acacgagtaagacagcattgatacagccatcattctctgggttgtttgtaac 28395422



to top

>dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0470D12
          Length = 157248

 Score =  159 bits (80), Expect = 1e-35
 Identities = 158/183 (86%), Gaps = 1/183 (0%)
 Strand = Plus / Plus

                                                                          
Query: 356    gttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttttcttcaca 415
              |||||||| |||| ||||||||||| || ||||||| |||| ||||||||||||||||||
Sbjct: 121430 gttccccttgtcaaaacaccaagagtagagtacatttgaccatttgggtttttcttcaca 121489

                                                                          
Query: 416    gaaattatgtcgaggttgaacgtacattttcagttcanggtgagtcacatgagccttggt 475
              ||||||||||| |||||||| ||||| |||||| ||| ||||||| ||||| ||||| ||
Sbjct: 121490 gaaattatgtcaaggttgaaagtaca-tttcagctcagggtgagtaacatgggcctttgt 121548

                                                                          
Query: 476    gaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttccttgtaaatcc 535
              |||||| || ||||| || |  || ||||  |||||||||||||| ||||||||||| ||
Sbjct: 121549 gaaacgaaggccagttggcctaataaaccgttcatactttggtggtttccttgtaaaccc 121608

                 
Query: 536    agg 538
              |||
Sbjct: 121609 agg 121611



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 53/55 (96%)
 Strand = Plus / Plus

                                                                     
Query: 293    ccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 347
              ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 121086 ccccaaacaacttttccagcaggggttaccagaccaagttcactaacgttcacct 121140



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 49/52 (94%)
 Strand = Plus / Plus

                                                                  
Query: 228    acacgagcaagacagcattgatacagccatcattctccgggttatttgtaac 279
              ||||||| ||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 120934 acacgagtaagacagcattgatacagccatcattctctgggttgtttgtaac 120985



to top

>emb|BX831560.1|CNS09ZPB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH15ZE08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1012

 Score =  133 bits (67), Expect = 7e-28
 Identities = 238/294 (80%), Gaps = 1/294 (0%)
 Strand = Plus / Minus

                                                                       
Query: 239 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 298
           |||||||| ||||| || || ||||| || || ||||| || ||||||||||| ||||| 
Sbjct: 822 acagcatttatacatccgtcgttctctggattgtttgtcacttgagcgtattttccccag 763

                                                                       
Query: 299 acaacttttccagcaggggttacgagaccaagttcactaacattcacctcgataattgtt 358
           ||||| |||||||| || || || |||||||| ||||| ||||| |||||||| ||||||
Sbjct: 762 acaacctttccagctggtgtaacaagaccaagctcactcacattgacctcgatgattgtt 703

                                                                       
Query: 359 cccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttttcttcacagaa 418
           ||||| ||||| ||||| || || || ||||| |||||||| || || ||||| |     
Sbjct: 702 cccctggtcatcacaccgagtgatgtatacatgggaccgttaggattcttcttaatcccg 643

                                                                       
Query: 419 attatgtcgaggttgaacgtacattttcagttcanggtgagtcacatgagccttggtgaa 478
           || || |||||   ||| || |||||| |||||| ||||||| || || |||||||||||
Sbjct: 642 atgatctcgagacagaaagtgcatttt-agttcagggtgagtaacgtgggccttggtgaa 584

                                                                 
Query: 479 acgcagaccagtaggtcggatgaacctctcatactttggtggcttccttgtaaa 532
           ||| |||||||  || |||||||| | ||| |||||||| ||||||||||||||
Sbjct: 583 acgaagaccagatggacggatgaaacgctcgtactttggaggcttccttgtaaa 530



to top

>ref|NM_120719.2| Arabidopsis thaliana structural constituent of ribosome AT5G06360
           mRNA, complete cds
          Length = 1059

 Score =  127 bits (64), Expect = 4e-26
 Identities = 235/291 (80%), Gaps = 1/291 (0%)
 Strand = Plus / Minus

                                                                       
Query: 239 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 298
           |||||||| ||||| || || ||||| || || ||||| || ||||||||||| ||||| 
Sbjct: 834 acagcatttatacatccgtcgttctctggattgtttgtcacttgagcgtattttccccag 775

                                                                       
Query: 299 acaacttttccagcaggggttacgagaccaagttcactaacattcacctcgataattgtt 358
           ||||| |||||||| || || || |||||||| ||||| ||||| |||||||| ||||||
Sbjct: 774 acaacctttccagctggtgtaacaagaccaagctcactcacattgacctcgatgattgtt 715

                                                                       
Query: 359 cccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttttcttcacagaa 418
           ||||| ||||| ||||| || || || ||||| |||||||| || || ||||| |     
Sbjct: 714 cccctggtcatcacaccgagtgatgtatacatgggaccgttaggattcttcttaatcccg 655

                                                                       
Query: 419 attatgtcgaggttgaacgtacattttcagttcanggtgagtcacatgagccttggtgaa 478
           || || |||||   ||| || |||||| |||||| ||||||| || || |||||||||||
Sbjct: 654 atgatctcgagacagaaagtgcatttt-agttcagggtgagtgacgtgggccttggtgaa 596

                                                              
Query: 479 acgcagaccagtaggtcggatgaacctctcatactttggtggcttccttgt 529
           ||| |||||||  || |||||||| | ||| |||||||| |||||||||||
Sbjct: 595 acgaagaccagatggacggatgaaacgctcgtactttggaggcttccttgt 545



to top

>gb|AY114052.1| Arabidopsis thaliana unknown protein (At5g06360) mRNA, complete cds
          Length = 814

 Score =  127 bits (64), Expect = 4e-26
 Identities = 235/291 (80%), Gaps = 1/291 (0%)
 Strand = Plus / Minus

                                                                       
Query: 239 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 298
           |||||||| ||||| || || ||||| || || ||||| || ||||||||||| ||||| 
Sbjct: 770 acagcatttatacatccgtcgttctctggattgtttgtcacttgagcgtattttccccag 711

                                                                       
Query: 299 acaacttttccagcaggggttacgagaccaagttcactaacattcacctcgataattgtt 358
           ||||| |||||||| || || || |||||||| ||||| ||||| |||||||| ||||||
Sbjct: 710 acaacctttccagctggtgtaacaagaccaagctcactcacattgacctcgatgattgtt 651

                                                                       
Query: 359 cccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttttcttcacagaa 418
           ||||| ||||| ||||| || || || ||||| |||||||| || || ||||| |     
Sbjct: 650 cccctggtcatcacaccgagtgatgtatacatgggaccgttaggattcttcttaatcccg 591

                                                                       
Query: 419 attatgtcgaggttgaacgtacattttcagttcanggtgagtcacatgagccttggtgaa 478
           || || |||||   ||| || |||||| |||||| ||||||| || || |||||||||||
Sbjct: 590 atgatctcgagacagaaagtgcatttt-agttcagggtgagtgacgtgggccttggtgaa 532

                                                              
Query: 479 acgcagaccagtaggtcggatgaacctctcatactttggtggcttccttgt 529
           ||| |||||||  || |||||||| | ||| |||||||| |||||||||||
Sbjct: 531 acgaagaccagatggacggatgaaacgctcgtactttggaggcttccttgt 481



to top

>gb|AY059725.1| Arabidopsis thaliana unknown protein (At5g06360) mRNA, complete cds
          Length = 999

 Score =  127 bits (64), Expect = 4e-26
 Identities = 235/291 (80%), Gaps = 1/291 (0%)
 Strand = Plus / Minus

                                                                       
Query: 239 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 298
           |||||||| ||||| || || ||||| || || ||||| || ||||||||||| ||||| 
Sbjct: 825 acagcatttatacatccgtcgttctctggattgtttgtcacttgagcgtattttccccag 766

                                                                       
Query: 299 acaacttttccagcaggggttacgagaccaagttcactaacattcacctcgataattgtt 358
           ||||| |||||||| || || || |||||||| ||||| ||||| |||||||| ||||||
Sbjct: 765 acaacctttccagctggtgtaacaagaccaagctcactcacattgacctcgatgattgtt 706

                                                                       
Query: 359 cccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttttcttcacagaa 418
           ||||| ||||| ||||| || || || ||||| |||||||| || || ||||| |     
Sbjct: 705 cccctggtcatcacaccgagtgatgtatacatgggaccgttaggattcttcttaatcccg 646

                                                                       
Query: 419 attatgtcgaggttgaacgtacattttcagttcanggtgagtcacatgagccttggtgaa 478
           || || |||||   ||| || |||||| |||||| ||||||| || || |||||||||||
Sbjct: 645 atgatctcgagacagaaagtgcatttt-agttcagggtgagtgacgtgggccttggtgaa 587

                                                              
Query: 479 acgcagaccagtaggtcggatgaacctctcatactttggtggcttccttgt 529
           ||| |||||||  || |||||||| | ||| |||||||| |||||||||||
Sbjct: 586 acgaagaccagatggacggatgaaacgctcgtactttggaggcttccttgt 536



to top

>emb|BX831075.1|CNS09ZF5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS55ZF06 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 983

 Score =  127 bits (64), Expect = 4e-26
 Identities = 235/291 (80%), Gaps = 1/291 (0%)
 Strand = Plus / Minus

                                                                       
Query: 239 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 298
           |||||||| ||||| || || ||||| || || ||||| || ||||||||||| ||||| 
Sbjct: 825 acagcatttatacatccgtcgttctctggattgtttgtcacttgagcgtattttccccag 766

                                                                       
Query: 299 acaacttttccagcaggggttacgagaccaagttcactaacattcacctcgataattgtt 358
           ||||| |||||||| || || || |||||||| ||||| ||||| |||||||| ||||||
Sbjct: 765 acaacctttccagctggtgtaacaagaccaagctcactcacattgacctcgatgattgtt 706

                                                                       
Query: 359 cccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttttcttcacagaa 418
           ||||| ||||| ||||| || || || ||||| |||||||| || || ||||| |     
Sbjct: 705 cccctggtcatcacaccgagtgatgtatacatgggaccgttaggattcttcttaatcccg 646

                                                                       
Query: 419 attatgtcgaggttgaacgtacattttcagttcanggtgagtcacatgagccttggtgaa 478
           || || |||||   ||| || |||||| |||||| ||||||| || || |||||||||||
Sbjct: 645 atgatctcgagacagaaagtgcatttt-agttcagggtgagtgacgtgggccttggtgaa 587

                                                              
Query: 479 acgcagaccagtaggtcggatgaacctctcatactttggtggcttccttgt 529
           ||| |||||||  || |||||||| | ||| |||||||| |||||||||||
Sbjct: 586 acgaagaccagatggacggatgaaacgctcgtactttggaggcttccttgt 536



to top

>gb|AY085454.1| Arabidopsis thaliana clone 15229 mRNA, complete sequence
          Length = 1056

 Score =  127 bits (64), Expect = 4e-26
 Identities = 235/291 (80%), Gaps = 1/291 (0%)
 Strand = Plus / Minus

                                                                       
Query: 239 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 298
           |||||||| ||||| || || ||||| || || ||||| || ||||||||||| ||||| 
Sbjct: 831 acagcatttatacatccgtcgttctctggattgtttgtcacttgagcgtattttccccag 772

                                                                       
Query: 299 acaacttttccagcaggggttacgagaccaagttcactaacattcacctcgataattgtt 358
           ||||| |||||||| || || || |||||||| ||||| ||||| |||||||| ||||||
Sbjct: 771 acaacctttccagctggtgtaacaagaccaagctcactcacattgacctcgatgattgtt 712

                                                                       
Query: 359 cccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttttcttcacagaa 418
           ||||| ||||| ||||| || || || ||||| |||||||| || || ||||| |     
Sbjct: 711 cccctggtcatcacaccgagtgatgtatacatgggaccgttaggattcttcttaatcccg 652

                                                                       
Query: 419 attatgtcgaggttgaacgtacattttcagttcanggtgagtcacatgagccttggtgaa 478
           || || |||||   ||| || |||||| |||||| ||||||| || || |||||||||||
Sbjct: 651 atgatctcgagacagaaagtgcatttt-agttcagggtgagtgacgtgggccttggtgaa 593

                                                              
Query: 479 acgcagaccagtaggtcggatgaacctctcatactttggtggcttccttgt 529
           ||| |||||||  || |||||||| | ||| |||||||| |||||||||||
Sbjct: 592 acgaagaccagatgggcggatgaaacgctcgtactttggaggcttccttgt 542



to top

>dbj|AP006541.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjB06D23, BM0787,
             complete sequence
          Length = 102734

 Score =  105 bits (53), Expect = 1e-19
 Identities = 161/196 (82%), Gaps = 1/196 (0%)
 Strand = Plus / Plus

                                                                         
Query: 343   cacctcgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgg 402
             |||||| ||||| |||||| | ||||| ||||||||||| |||||||| || || || ||
Sbjct: 55302 cacctcaataatagttcccttggtcatgacaccaagagaggtgtacatagggccattagg 55361

                                                                         
Query: 403   gtttttcttcacagaaattatgtcgaggttgaacgtacattttcagttcanggtgagtca 462
             ||||||||||||   |||||| || || ||||| || |||||  |||||  | ||||| |
Sbjct: 55362 gtttttcttcactccaattatttctagattgaatgtgcattta-agttctggatgagtga 55420

                                                                         
Query: 463   catgagccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggct 522
             ||||||| |||||||| ||||| |||||||| || ||||||| |||||||||||| || |
Sbjct: 55421 catgagctttggtgaatcgcagtccagtaggacgaatgaaccgctcatactttggaggtt 55480

                             
Query: 523   tccttgtaaatccagg 538
             | || ||||| |||||
Sbjct: 55481 ttctagtaaaaccagg 55496



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                  
Query: 233   agcaagacagcattgatacagccatcattctccgggttatttgtaacctgagc 285
             |||||||||||||| ||||| |||||||| || |||||||| |||||||||||
Sbjct: 55008 agcaagacagcatttatacaaccatcattttctgggttattggtaacctgagc 55060



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 293   ccccaaacaacttttccagcaggggttacgagaccaagttcact 336
             ||||| ||||||||||| ||||| || || ||||||||||||||
Sbjct: 55159 ccccacacaacttttcctgcaggagtgaccagaccaagttcact 55202



to top

>dbj|AP006538.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT18J10, TM0323a,
             complete sequence
          Length = 95559

 Score =  105 bits (53), Expect = 1e-19
 Identities = 161/196 (82%), Gaps = 1/196 (0%)
 Strand = Plus / Plus

                                                                         
Query: 343   cacctcgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgg 402
             |||||| ||||| |||||| | ||||| ||||||||||| |||||||| || || || ||
Sbjct: 20417 cacctcaataatagttcccttggtcatgacaccaagagaggtgtacatagggccattagg 20476

                                                                         
Query: 403   gtttttcttcacagaaattatgtcgaggttgaacgtacattttcagttcanggtgagtca 462
             ||||||||||||   |||||| || || ||||| || |||||  |||||  | ||||| |
Sbjct: 20477 gtttttcttcactccaattatttctagattgaatgtgcattta-agttctggatgagtga 20535

                                                                         
Query: 463   catgagccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggct 522
             ||||||| |||||||| ||||| |||||||| || ||||||| |||||||||||| || |
Sbjct: 20536 catgagctttggtgaatcgcagtccagtaggacgaatgaaccgctcatactttggaggtt 20595

                             
Query: 523   tccttgtaaatccagg 538
             | || ||||| |||||
Sbjct: 20596 ttctagtaaaaccagg 20611



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                  
Query: 233   agcaagacagcattgatacagccatcattctccgggttatttgtaacctgagc 285
             |||||||||||||| ||||| |||||||| || |||||||| |||||||||||
Sbjct: 20123 agcaagacagcatttatacaaccatcattttctgggttattggtaacctgagc 20175



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 293   ccccaaacaacttttccagcaggggttacgagaccaagttcact 336
             ||||| ||||||||||| ||||| || || ||||||||||||||
Sbjct: 20274 ccccacacaacttttcctgcaggagtgaccagaccaagttcact 20317



to top

>emb|BX831803.1|CNS09ZT9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH30ZE06 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1007

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 232/292 (79%), Gaps = 2/292 (0%)
 Strand = Plus / Minus

                                                                       
Query: 239 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 298
           |||||||| ||||| || || ||||| || || ||||| || ||||||||||| ||||| 
Sbjct: 828 acagcatttatacatccgtcgttctctggattgtttgtcacttgagcgtattttccccag 769

                                                                       
Query: 299 acaacttt-tccagcaggggttacgagaccaagttcactaacattcacctcgataattgt 357
           ||||| || |||||| || || || |||||||| ||||| ||||| |||||||| |||||
Sbjct: 768 acaaccttatccagctggtgtaacaagaccaagctcactcacattgacctcgatgattgt 709

                                                                       
Query: 358 tcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttttcttcacaga 417
           |||||| || || ||||| ||  | || ||||| |||||||| || || ||||| |    
Sbjct: 708 tcccctggtaatcacaccgagttatgtatacatgggaccgttaggattcttcttaatccc 649

                                                                       
Query: 418 aattatgtcgaggttgaacgtacattttcagttcanggtgagtcacatgagccttggtga 477
            || || |||||   ||| || |||||| |||||| ||||||| || || ||||||||||
Sbjct: 648 gatgatctcgagacagaaagtgcatttt-agttcagggtgagttacgtgggccttggtga 590

                                                               
Query: 478 aacgcagaccagtaggtcggatgaacctctcatactttggtggcttccttgt 529
           |||| |||| ||  || |||||||| | ||| |||||||| |||||||||||
Sbjct: 589 aacgaagactagatggacggatgaaacgctcgtactttggaggcttccttgt 538



to top

>ref|XM_950402.1| Theileria annulata strain Ankara tgf beta-inducible nuclear protein
           1 (TA18362) partial mRNA
          Length = 780

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 99/120 (82%)
 Strand = Plus / Minus

                                                                       
Query: 241 agcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaac 300
           |||||||||||| |||||||| || || ||||||||||| ||||| |||||| |||||| 
Sbjct: 765 agcattgatacacccatcattttcgggattatttgtaacttgagcatatttggcccaaat 706

                                                                       
Query: 301 aacttttccagcaggggttacgagaccaagttcactaacattcacctcgataattgttcc 360
            |||||||| |   | ||||| | ||| |||||||| |||||||| || || ||||||||
Sbjct: 705 gacttttcctgtctgtgttaccaaacccagttcactcacattcacttcaattattgttcc 646



to top

>ref|XM_778150.1| PREDICTED: Strongylocentrotus purpuratus similar to TGF
           beta-inducible nuclear protein 1 (Hairy cell leukemia
           protein 1) (HUSSY-29) (LOC577954), mRNA
          Length = 859

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                       
Query: 238 gacagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgcccca 297
           |||||||||||| ||||||||||| || ||||||||||| || || || ||||| |||||
Sbjct: 847 gacagcattgatgcagccatcattttcagggttatttgtgacttgcgcatatttacccca 788

                       
Query: 298 aacaacttttcc 309
            |||||||||||
Sbjct: 787 gacaacttttcc 776



to top

>dbj|AB006700.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHF15
          Length = 83865

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                         
Query: 447   agttcanggtgagtcacatgagccttggtgaaacgcagaccagtaggtcggatgaacctc 506
             |||||| ||||||| || || |||||||||||||| |||||||  || |||||||| | |
Sbjct: 54597 agttcagggtgagtgacgtgggccttggtgaaacgaagaccagatggacggatgaaacgc 54538

                                    
Query: 507   tcatactttggtggcttccttgt 529
             || |||||||| |||||||||||
Sbjct: 54537 tcgtactttggaggcttccttgt 54515



to top

>emb|BX832734.1|CNS09ZR3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH93ZC02 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 916

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 128/159 (80%)
 Strand = Plus / Minus

                                                                       
Query: 241 agcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaac 300
           |||||| ||||| || || ||||| || || ||||| || ||| | ||||| ||||| ||
Sbjct: 767 agcatttatacatccgtcgttctctggattgtttgtcacttgaacatattttccccagac 708

                                                                       
Query: 301 aacttttccagcaggggttacgagaccaagttcactaacattcacctcgataattgttcc 360
           ||| |||||||| || || ||  |||||||  |||| ||||| |||||||| ||||||||
Sbjct: 707 aacctttccagctggtgtcacacgaccaagcgcactcacattgacctcgatgattgttcc 648

                                                  
Query: 361 cctcgtcataacaccaagagaagtgtacattggaccgtt 399
           ||| ||||| ||||| || || || ||||| ||||||||
Sbjct: 647 cctggtcatcacaccgagtgatgtatacatgggaccgtt 609



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 447 agttcanggtgagtcacatgagccttggtgaaacgcagaccag 489
           |||||| ||||||| || || |||||||||||||| |||||||
Sbjct: 562 agttcagggtgagtgacgtgggccttggtgaaacgaagaccag 520



to top

>gb|AY706155.1| Aplysia californica TGF beta-inducible nuclear protein mRNA,
           complete cds
          Length = 878

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                       
Query: 226 tcacacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagc 285
           |||||| | ||| ||||| ||||| ||||||||||| ||||| || || || || |||||
Sbjct: 812 tcacactaacaacacagcgttgatgcagccatcattttccggattgttggtcacttgagc 753

                                     
Query: 286 gtatttgccccaaacaacttttccag 311
           |||||| ||||| |||||||||||||
Sbjct: 752 gtatttaccccacacaacttttccag 727



to top

>gb|DQ424947.1| Bombyx mori TGF beta-inducible nuclear protein 1 (TINP1) mRNA,
            complete cds
          Length = 1383

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 239  acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 298
            |||||||| || |||||||||||||| || ||||| || || ||||||||||| ||||| 
Sbjct: 1159 acagcattaatgcagccatcattctctggattattcgtgacttgagcgtatttaccccac 1100

                          
Query: 299  acaacttttccagc 312
            |||||||| |||||
Sbjct: 1099 acaactttaccagc 1086



to top

>gb|DQ311226.1| Bombyx mori hairy cell leukemia protein 1 mRNA, complete cds
          Length = 1380

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 239  acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 298
            |||||||| || |||||||||||||| || ||||| || || ||||||||||| ||||| 
Sbjct: 1161 acagcattaatgcagccatcattctctggattattcgtgacttgagcgtatttaccccac 1102

                          
Query: 299  acaacttttccagc 312
            |||||||| |||||
Sbjct: 1101 acaactttaccagc 1088



to top

>ref|XM_381311.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01135.1)
           partial mRNA
          Length = 783

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 88/107 (82%)
 Strand = Plus / Minus

                                                                       
Query: 245 ttgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaacaact 304
           ||||| ||||| || ||||| |||||||| || |||||||||||    ||||||||||| 
Sbjct: 764 ttgatgcagccctcgttctctgggttattggtgacctgagcgtagcgaccccaaacaacc 705

                                                          
Query: 305 tttccagcaggggttacgagaccaagttcactaacattcacctcgat 351
           |||||| ||| ||| || ||||||||||| || || || ||||||||
Sbjct: 704 tttccaccagcggtgaccagaccaagttcgctgacgttgacctcgat 658



to top

>gb|BC073255.1| Xenopus laevis cDNA clone MGC:80606 IMAGE:5506003, complete cds
          Length = 1003

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                       
Query: 242 gcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaaca 301
           ||||| |||||||||||||| || || |||||||| || || || ||||| |||||||||
Sbjct: 927 gcatttatacagccatcattttctggattatttgtgacttgtgcatatttaccccaaaca 868

                
Query: 302 acttt 306
           |||||
Sbjct: 867 acttt 863



to top

>gb|AY281348.1| Xenopus laevis HMG-box protein HMG2L1 (HMG2L1) mRNA, complete cds
          Length = 2626

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                       
Query: 242 gcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaaca 301
           ||||| |||||||||||||| || || |||||||| || || || ||||| |||||||||
Sbjct: 548 gcatttatacagccatcattttctggattatttgtgacttgtgcatatttaccccaaaca 489

                
Query: 302 acttt 306
           |||||
Sbjct: 488 acttt 484



to top

>gb|BC046083.1| Danio rerio zgc:56334, mRNA (cDNA clone MGC:56334 IMAGE:5603772),
           complete cds
          Length = 1194

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                       
Query: 233 agcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttg 292
           ||||| || ||||| |||||||||||||| || |||||||| || ||||| |||||||| 
Sbjct: 916 agcaacacggcattaatacagccatcattttctgggttattcgtcacctgggcgtattta 857

                
Query: 293 cccca 297
           |||||
Sbjct: 856 cccca 852



to top

>ref|NM_199568.1| Danio rerio zgc:56334 (zgc:56334), mRNA
          Length = 1194

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                       
Query: 233 agcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttg 292
           ||||| || ||||| |||||||||||||| || |||||||| || ||||| |||||||| 
Sbjct: 916 agcaacacggcattaatacagccatcattttctgggttattcgtcacctgggcgtattta 857

                
Query: 293 cccca 297
           |||||
Sbjct: 856 cccca 852



to top

>ref|XM_779898.1| PREDICTED: Strongylocentrotus purpuratus similar to TGF
           beta-inducible nuclear protein 1 (CDK105 protein)
           (LOC579803), mRNA
          Length = 318

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                       
Query: 238 gacagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgcccca 297
           |||||| ||||| |||||||| || || ||||||||||| || || || ||||| |||||
Sbjct: 306 gacagcgttgatgcagccatcgttttcagggttatttgtgacttgcgcatatttacccca 247

                       
Query: 298 aacaacttttcc 309
            |||||||||||
Sbjct: 246 gacaacttttcc 235



to top

>emb|X69119.1|DMUQ80FP D.melanogaster gene for ubiquitin-80 fusion protein
          Length = 5329

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 278  acctgagcgtatttgccccaaacaacttttcc 309
            |||||||||||||||||||| |||||||||||
Sbjct: 4047 acctgagcgtatttgccccagacaacttttcc 4016



to top

>gb|AY118472.1| Drosophila melanogaster GM13959 full insert cDNA
          Length = 907

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 278 acctgagcgtatttgccccaaacaacttttcc 309
           |||||||||||||||||||| |||||||||||
Sbjct: 763 acctgagcgtatttgccccagacaacttttcc 732



to top

>ref|NM_058031.4| Drosophila melanogaster Intronic Protein 259 CG5277-RA (Ip259),
           mRNA
          Length = 900

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 278 acctgagcgtatttgccccaaacaacttttcc 309
           |||||||||||||||||||| |||||||||||
Sbjct: 790 acctgagcgtatttgccccagacaacttttcc 759



to top

>emb|BX832733.1|CNS09ZQF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH93ZB03 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1028

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                       
Query: 447 agttcanggtgagtcacatgagccttggtgaaacgcagaccagtaggtcggatgaacctc 506
           |||||| ||||||| || || |||||||||||||| |||||||  || |||||||  | |
Sbjct: 606 agttcagggtgagtgacgtgggccttggtgaaacgaagaccagatggacggatgacacgc 547

                                  
Query: 507 tcatactttggtggcttccttgt 529
           || | |||||| |||||||||||
Sbjct: 546 tcgtgctttggaggcttccttgt 524



to top

>gb|AC007451.1|AC007451 Drosophila melanogaster, chromosome 2L, region 31D1-31F4, BAC clones
             DS00953 and BACR48K04, complete sequence
          Length = 161754

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                             
Query: 278   acctgagcgtatttgccccaaacaacttttcc 309
             |||||||||||||||||||| |||||||||||
Sbjct: 69341 acctgagcgtatttgccccagacaacttttcc 69310



to top

>gb|AE003628.2| Drosophila melanogaster chromosome 2L, section 37 of 83 of the complete
              sequence
          Length = 269102

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                              
Query: 278    acctgagcgtatttgccccaaacaacttttcc 309
              |||||||||||||||||||| |||||||||||
Sbjct: 171609 acctgagcgtatttgccccagacaacttttcc 171578



to top

>gb|U56257.1|DMU56257 Drosophila melanogaster intronic protein 259 (IP259) gene, complete
            cds
          Length = 1367

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 278  acctgagcgtatttgccccaaacaacttttcc 309
            |||||||||||||||||||| |||||||||||
Sbjct: 1130 acctgagcgtatttgccccagacaacttttcc 1099



to top

>ref|XM_623623.1| PREDICTED: Apis mellifera similar to CG5277-PA (LOC551230), mRNA
          Length = 780

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                       
Query: 241 agcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaac 300
           |||||| || || |||||||| || || ||||||||||| ||||| ||||| ||||||||
Sbjct: 765 agcatttatgcaaccatcattttcaggattatttgtaacttgagcatattttccccaaac 706

                 
Query: 301 aacttt 306
            |||||
Sbjct: 705 cacttt 700



to top

>emb|AM260497.1| Platanus acerifolia partial mRNA for TGF-beta inducible protein
           (tgf gene)
          Length = 660

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 76/93 (81%)
 Strand = Plus / Minus

                                                                       
Query: 443 tttcagttcanggtgagtcacatgagccttggtgaaacgcagaccagtaggtcggatgaa 502
           ||||| |||| |||| ||||| || || |||||||||||||  || |  || || |||||
Sbjct: 605 tttcaattcagggtgtgtcacgtgggctttggtgaaacgcaagcctgatggacgaatgaa 546

                                            
Query: 503 cctctcatactttggtggcttccttgtaaatcc 535
            | |||||||||||| ||||| |||||||||||
Sbjct: 545 acgctcatactttggaggctttcttgtaaatcc 513



to top

>gb|AY438655.1| Quercus robur TGF-beta inducible protein gene, partial cds and 3'
           UTR
          Length = 634

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 239 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtattt 291
           ||||| || ||||| ||||||||||| ||||||||||| || ||||| |||||
Sbjct: 430 acagcgtttatacaaccatcattctcagggttatttgtcacttgagcatattt 378



to top

>ref|XM_711546.1| Candida albicans SC5314 putative ribosome maturation factor
           (CaO19_7398), mRNA
          Length = 390

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 281 tgagcgtatttgccccaaacaacttt 306
           ||||||||||| ||||||||||||||
Sbjct: 335 tgagcgtatttaccccaaacaacttt 310



to top

>ref|XM_710995.1| Candida albicans SC5314 putative ribosome maturation factor
           (CaO19_7424), mRNA
          Length = 786

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 281 tgagcgtatttgccccaaacaacttt 306
           ||||||||||| ||||||||||||||
Sbjct: 731 tgagcgtatttaccccaaacaacttt 706



to top

>ref|XM_813522.1| Trypanosoma cruzi strain CL Brener 40S ribosomal protein S8
           (Tc00.1047053508231.200) partial mRNA
          Length = 783

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 58/70 (82%)
 Strand = Plus / Minus

                                                                       
Query: 228 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 287
           |||| ||||| || |||||||| ||||| || ||||||||||| || || ||||| ||||
Sbjct: 781 acaccagcaacacggcattgatgcagccgtcgttctccgggttgttagttacctgcgcgt 722

                     
Query: 288 atttgcccca 297
           | || |||||
Sbjct: 721 actttcccca 712



to top

>ref|XM_801572.1| Trypanosoma cruzi strain CL Brener 40S ribosomal protein S8
           (Tc00.1047053506249.60) partial mRNA
          Length = 783

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 58/70 (82%)
 Strand = Plus / Minus

                                                                       
Query: 228 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 287
           |||| ||||| || |||||||| ||||| || ||||||||||| || || ||||| ||||
Sbjct: 781 acaccagcaacacggcattgatgcagccgtcgttctccgggttgttagttacctgcgcgt 722

                     
Query: 288 atttgcccca 297
           | || |||||
Sbjct: 721 actttcccca 712



to top

>dbj|AK115831.1| Ciona intestinalis cDNA, clone:cilv028h09, full insert sequence
          Length = 1063

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                       
Query: 233 agcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttg 292
           ||||| |||||||| |||||||||||||| || || || || || || || || ||||| 
Sbjct: 708 agcaacacagcattaatacagccatcattttcaggattgttcgtgacttgtgcatatttt 649

                         
Query: 293 ccccaaacaacttt 306
           ||||||| ||||||
Sbjct: 648 ccccaaataacttt 635



to top

>gb|U20260.1|GMU20260 Glycine max glutamate 1-semialdehyde aminotransferase (Gsa1) gene,
            complete cds
          Length = 1974

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 397  gtttgggtttttcttcacagaa 418
            ||||||||||||||||||||||
Sbjct: 1576 gtttgggtttttcttcacagaa 1597



to top

>dbj|AP004484.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT06I17, TM0017,
             complete sequence
          Length = 121127

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 397   gtttgggtttttcttcacagaa 418
             ||||||||||||||||||||||
Sbjct: 79904 gtttgggtttttcttcacagaa 79925



to top

>gb|L12453.1|SOYGSA Soybean glutamate 1-semialdehyde aminotransferase mRNA, complete cds
          Length = 1822

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 397  gtttgggtttttcttcacagaa 418
            ||||||||||||||||||||||
Sbjct: 1250 gtttgggtttttcttcacagaa 1271



to top

>emb|AL117183.1|SPCP1E11 S.pombe chromosome III p1 clone p1E11
          Length = 25057

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 60/73 (82%)
 Strand = Plus / Minus

                                                                         
Query: 281   tgagcgtatttgccccaaacaacttttccagcaggggttacgagaccaagttcactaaca 340
             ||||| ||||| |||||||||||||| ||| |||  || || ||||| | |||||| |||
Sbjct: 20068 tgagcatatttaccccaaacaactttaccaccagatgtgacaagacctaattcactgaca 20009

                          
Query: 341   ttcacctcgataa 353
             || ||||| ||||
Sbjct: 20008 ttaacctcaataa 19996



to top

>emb|AJ719405.1| Gallus gallus mRNA for hypothetical protein, clone 2a2
          Length = 1020

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 242 gcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaaca 301
           ||||| |||||||||||||| || || || ||||| || || || ||||| ||||||| |
Sbjct: 795 gcattaatacagccatcattttctggattgtttgttacttgtgcatattttccccaaata 736

                
Query: 302 acttt 306
           |||||
Sbjct: 735 acttt 731



to top

>ref|NM_001006579.1| Gallus gallus similar to TGF beta-inducible nuclear protein 1
           (L-name related LNR42) (LOC427206), mRNA
          Length = 1020

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 242 gcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaaca 301
           ||||| |||||||||||||| || || || ||||| || || || ||||| ||||||| |
Sbjct: 795 gcattaatacagccatcattttctggattgtttgttacttgtgcatattttccccaaata 736

                
Query: 302 acttt 306
           |||||
Sbjct: 735 acttt 731



to top

>emb|CR523694.1| Gallus gallus finished cDNA, clone ChEST23p6
          Length = 840

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 242 gcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaaca 301
           ||||| |||||||||||||| || || || ||||| || || || ||||| ||||||| |
Sbjct: 708 gcattaatacagccatcattttctggattgtttgttacttgtgcatattttccccaaata 649

                
Query: 302 acttt 306
           |||||
Sbjct: 648 acttt 644



to top

>emb|CR388679.1| Gallus gallus finished cDNA, clone ChEST387a6
          Length = 785

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 242 gcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaaca 301
           ||||| |||||||||||||| || || || ||||| || || || ||||| ||||||| |
Sbjct: 576 gcattaatacagccatcattttctggattgtttgttacttgtgcatattttccccaaata 517

                
Query: 302 acttt 306
           |||||
Sbjct: 516 acttt 512



to top

>ref|NM_001023548.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCP1E11.08),
           partial mRNA
          Length = 783

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 60/73 (82%)
 Strand = Plus / Minus

                                                                       
Query: 281 tgagcgtatttgccccaaacaacttttccagcaggggttacgagaccaagttcactaaca 340
           ||||| ||||| |||||||||||||| ||| |||  || || ||||| | |||||| |||
Sbjct: 728 tgagcatatttaccccaaacaactttaccaccagatgtgacaagacctaattcactgaca 669

                        
Query: 341 ttcacctcgataa 353
           || ||||| ||||
Sbjct: 668 ttaacctcaataa 656



to top

>gb|AC005699.9|AC005699 Homo sapiens chromosome 4 clone C0473M13 map 4p16, complete sequence
          Length = 191904

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 404    tttttcttcacagaaattatg 424
              |||||||||||||||||||||
Sbjct: 127068 tttttcttcacagaaattatg 127048



to top

>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 287     tatttgccccaaacaacttttccag 311
               ||||| |||||||||||||||||||
Sbjct: 2872770 tatttaccccaaacaacttttccag 2872746



to top

>gb|AC164111.4| Mus musculus BAC clone RP23-267E11 from chromosome 6, complete sequence
          Length = 179265

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 365    gtcataacaccaagagaagt 384
              ||||||||||||||||||||
Sbjct: 134625 gtcataacaccaagagaagt 134606



to top

>ref|NM_001031517.1| Gallus gallus ankyrin repeat and SOCS box-containing 3 (ASB3), mRNA
          Length = 2770

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 cagtgcactcatcccttcaa 206
           ||||||||||||||||||||
Sbjct: 460 cagtgcactcatcccttcaa 441



to top

>gb|AC138741.7| Mus musculus chromosome 1, clone RP24-260D21, complete sequence
          Length = 161846

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   gtctattccaaagacaagca 140
             ||||||||||||||||||||
Sbjct: 99757 gtctattccaaagacaagca 99738



to top

>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08,
             complete sequence
          Length = 119500

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   cccaaacaacttttccagca 313
             ||||||||||||||||||||
Sbjct: 77654 cccaaacaacttttccagca 77673



to top

>gb|U80846.1| Caenorhabditis elegans cosmid K06A9, complete sequence
          Length = 39573

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 431   ttgaacgtacattttcagtt 450
             ||||||||||||||||||||
Sbjct: 16930 ttgaacgtacattttcagtt 16911



to top

>gb|AC124563.4| Mus musculus BAC clone RP23-206B15 from chromosome 6, complete sequence
          Length = 210092

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 365   gtcataacaccaagagaagt 384
             ||||||||||||||||||||
Sbjct: 52579 gtcataacaccaagagaagt 52560



to top

>ref|XM_646180.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein
           (173.t00011) partial mRNA
          Length = 783

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                       
Query: 239 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 298
           |||||||| || || |||||||| || || |||||||| || || || ||||||||||| 
Sbjct: 770 acagcattaatgcacccatcattttctggattatttgttacttgtgcatatttgccccat 711

               
Query: 299 acaa 302
           ||||
Sbjct: 710 acaa 707



to top

>emb|AL450345.6| Human DNA sequence from clone RP11-300M24 on chromosome 6 Contains a
              novel gene, complete sequence
          Length = 183342

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 156    acaaaattgcccttgttaga 175
              ||||||||||||||||||||
Sbjct: 111619 acaaaattgcccttgttaga 111638



to top

>emb|AL096701.14|HSA247I13 Human DNA sequence from clone RP11-247I13 on chromosome 22 Contains the
              5' end of the DRG1 gene for developmentally regulated GTP
              binding protein 1, the EIF4ENIF1 gene foreukaryotic
              translation initiation factor 4E nuclear import factor 1,
              the 5' end of the gene for homolog of yeast Sfi1 (SFI1), a
              H2A histone family member Z (H2AFZ) pseudogene, a ribosomal
              protein S26 (RPS260) pseudogene, two novel genes and two
              CpG islands, complete sequence
          Length = 168110

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 299    acaacttttccagcaggggt 318
              ||||||||||||||||||||
Sbjct: 155785 acaacttttccagcaggggt 155804



to top

>emb|AJ720837.1| Gallus gallus mRNA for hypothetical protein, clone 27g5
          Length = 2794

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 cagtgcactcatcccttcaa 206
           ||||||||||||||||||||
Sbjct: 484 cagtgcactcatcccttcaa 465



to top

>gb|AC161624.4| Pan troglodytes BAC clone CH251-149E7 from chromosome unknown, complete
             sequence
          Length = 180132

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   acaacttttccagcaggggt 318
             ||||||||||||||||||||
Sbjct: 74788 acaacttttccagcaggggt 74807



to top

>gb|AC079857.5| Homo sapiens BAC clone RP11-589E1 from 4, complete sequence
          Length = 186219

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 156    acaaaattgcccttgttaga 175
              ||||||||||||||||||||
Sbjct: 130509 acaaaattgcccttgttaga 130490



to top

>gb|AC156796.2| Mus musculus BAC clone RP24-90N20 from chromosome 9, complete sequence
          Length = 204185

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 397   gtttgggtttttcttcacagaaat 420
             ||||||||||||||||| ||||||
Sbjct: 82301 gtttgggtttttcttcaaagaaat 82324



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 294      cccaaacaacttttccagca 313
                ||||||||||||||||||||
Sbjct: 28442730 cccaaacaacttttccagca 28442749



to top

>emb|AL136419.3|CNS01DW7 Human chromosome 14 DNA sequence BAC R-76P17 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 169476

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 297    aaacaacttttccagcaggg 316
              ||||||||||||||||||||
Sbjct: 148732 aaacaacttttccagcaggg 148751


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,884,202
Number of Sequences: 3902068
Number of extensions: 3884202
Number of successful extensions: 65765
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65599
Number of HSP's gapped (non-prelim): 150
length of query: 538
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 515
effective length of database: 17,143,297,704
effective search space: 8828798317560
effective search space used: 8828798317560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top