Clone Name | rbasd21e23 |
---|---|
Clone Library Name | barley_pub |
>gb|AY105049.1| Zea mays PCO112338 mRNA sequence Length = 1250 Score = 363 bits (183), Expect = 4e-97 Identities = 279/310 (90%), Gaps = 1/310 (0%) Strand = Plus / Minus Query: 228 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 287 |||| ||||| |||||||||||||| ||||||||||||||||| |||||||| ||||| | Sbjct: 1027 acactagcaaaacagcattgatacacccatcattctccgggttgtttgtaacttgagcat 968 Query: 288 atttgccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 347 |||| |||||||||||||||||||| || ||||| |||||||| ||||| ||||| |||| Sbjct: 967 atttcccccaaacaacttttccagcgggagttaccagaccaagctcactgacatttacct 908 Query: 348 cgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttt 407 | || ||||||||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 907 caatgattgttccccttgtcataacaccaagagaagtgtacattggaccatttgggtttt 848 Query: 408 tcttcacagaaattatgtcgaggttgaacgtacattttcagttcanggtgagtcacatga 467 ||||||||||||||||||| |||||||| || || ||||| || |||||||||||||| Sbjct: 847 tcttcacagaaattatgtcaaggttgaaagtgca-cttcagctctgggtgagtcacatga 789 Query: 468 gccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttcctt 527 || |||||||||||||||||||| || || ||||||| ||||||||||||||| |||||| Sbjct: 788 gctttggtgaaacgcagaccagttggccgaatgaaccgctcatactttggtggtttcctt 729 Query: 528 gtaaatccag 537 |||||||||| Sbjct: 728 gtaaatccag 719
>gb|BT017352.1| Zea mays clone EL01N0323H03.c mRNA sequence Length = 1151 Score = 339 bits (171), Expect = 6e-90 Identities = 276/310 (89%), Gaps = 1/310 (0%) Strand = Plus / Minus Query: 228 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 287 |||| ||||| || ||||||||||||||||| ||||||||||| |||||||| ||||| | Sbjct: 936 acactagcaaaactgcattgatacagccatcgttctccgggttgtttgtaacttgagcat 877 Query: 288 atttgccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 347 |||| |||||||||||||||||||| || ||||| |||||||| ||||| ||||| |||| Sbjct: 876 atttcccccaaacaacttttccagcgggagttaccagaccaagctcactgacatttacct 817 Query: 348 cgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttt 407 | || || |||||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 816 caatgatcgttccccttgtcataacaccaagagaagtgtacattggaccatttgggtttt 757 Query: 408 tcttcacagaaattatgtcgaggttgaacgtacattttcagttcanggtgagtcacatga 467 ||||||||||||||||||| |||||||| || || ||||| || |||||||||||||| Sbjct: 756 tcttcacagaaattatgtcaaggttgaaagtgca-cttcagctctgggtgagtcacatga 698 Query: 468 gccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttcctt 527 || |||||||||||||||||||| || || ||||||| |||||||||||||| |||||| Sbjct: 697 gctttggtgaaacgcagaccagttggccgaatgaaccgttcatactttggtggtttcctt 638 Query: 528 gtaaatccag 537 |||||||||| Sbjct: 637 gtaaatccag 628
>ref|XM_479475.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1039 Score = 317 bits (160), Expect = 2e-83 Identities = 274/311 (88%), Gaps = 1/311 (0%) Strand = Plus / Minus Query: 228 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 287 ||||||| ||||||||||||||||||||||||||||| ||||| |||||||| || || | Sbjct: 832 acacgagtaagacagcattgatacagccatcattctctgggttgtttgtaacttgtgcat 773 Query: 288 atttgccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 347 |||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 772 atttaccccaaacaacttttccagcaggggttaccagaccaagttcactaacgttcacct 713 Query: 348 cgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttt 407 | || || |||||||| |||| ||||||||||| || ||||||| |||| |||||||||| Sbjct: 712 caatgatagttccccttgtcaaaacaccaagagtagagtacatttgaccatttgggtttt 653 Query: 408 tcttcacagaaattatgtcgaggttgaacgtacattttcagttcanggtgagtcacatga 467 ||||||||||||||||||| |||||||| ||||| |||||| ||| ||||||| ||||| Sbjct: 652 tcttcacagaaattatgtcaaggttgaaagtaca-tttcagctcagggtgagtaacatgg 594 Query: 468 gccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttcctt 527 ||||| |||||||| || ||||| || | || |||| |||||||||||||| |||||| Sbjct: 593 gcctttgtgaaacgaaggccagttggcctaataaaccgttcatactttggtggtttcctt 534 Query: 528 gtaaatccagg 538 ||||| ||||| Sbjct: 533 gtaaacccagg 523
>ref|XM_507411.1| PREDICTED Oryza sativa (japonica cultivar-group), P0470D12.138 mRNA Length = 1041 Score = 317 bits (160), Expect = 2e-83 Identities = 274/311 (88%), Gaps = 1/311 (0%) Strand = Plus / Minus Query: 228 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 287 ||||||| ||||||||||||||||||||||||||||| ||||| |||||||| || || | Sbjct: 832 acacgagtaagacagcattgatacagccatcattctctgggttgtttgtaacttgtgcat 773 Query: 288 atttgccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 347 |||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 772 atttaccccaaacaacttttccagcaggggttaccagaccaagttcactaacgttcacct 713 Query: 348 cgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttt 407 | || || |||||||| |||| ||||||||||| || ||||||| |||| |||||||||| Sbjct: 712 caatgatagttccccttgtcaaaacaccaagagtagagtacatttgaccatttgggtttt 653 Query: 408 tcttcacagaaattatgtcgaggttgaacgtacattttcagttcanggtgagtcacatga 467 ||||||||||||||||||| |||||||| ||||| |||||| ||| ||||||| ||||| Sbjct: 652 tcttcacagaaattatgtcaaggttgaaagtaca-tttcagctcagggtgagtaacatgg 594 Query: 468 gccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttcctt 527 ||||| |||||||| || ||||| || | || |||| |||||||||||||| |||||| Sbjct: 593 gcctttgtgaaacgaaggccagttggcctaataaaccgttcatactttggtggtttcctt 534 Query: 528 gtaaatccagg 538 ||||| ||||| Sbjct: 533 gtaaacccagg 523
>ref|XM_506559.2| PREDICTED Oryza sativa (japonica cultivar-group), P0470D12.138 mRNA Length = 1227 Score = 317 bits (160), Expect = 2e-83 Identities = 274/311 (88%), Gaps = 1/311 (0%) Strand = Plus / Minus Query: 228 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 287 ||||||| ||||||||||||||||||||||||||||| ||||| |||||||| || || | Sbjct: 835 acacgagtaagacagcattgatacagccatcattctctgggttgtttgtaacttgtgcat 776 Query: 288 atttgccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 347 |||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 775 atttaccccaaacaacttttccagcaggggttaccagaccaagttcactaacgttcacct 716 Query: 348 cgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttt 407 | || || |||||||| |||| ||||||||||| || ||||||| |||| |||||||||| Sbjct: 715 caatgatagttccccttgtcaaaacaccaagagtagagtacatttgaccatttgggtttt 656 Query: 408 tcttcacagaaattatgtcgaggttgaacgtacattttcagttcanggtgagtcacatga 467 ||||||||||||||||||| |||||||| ||||| |||||| ||| ||||||| ||||| Sbjct: 655 tcttcacagaaattatgtcaaggttgaaagtaca-tttcagctcagggtgagtaacatgg 597 Query: 468 gccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttcctt 527 ||||| |||||||| || ||||| || | || |||| |||||||||||||| |||||| Sbjct: 596 gcctttgtgaaacgaaggccagttggcctaataaaccgttcatactttggtggtttcctt 537 Query: 528 gtaaatccagg 538 ||||| ||||| Sbjct: 536 gtaaacccagg 526
>dbj|AK104794.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G01, full insert sequence Length = 1039 Score = 317 bits (160), Expect = 2e-83 Identities = 274/311 (88%), Gaps = 1/311 (0%) Strand = Plus / Minus Query: 228 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 287 ||||||| ||||||||||||||||||||||||||||| ||||| |||||||| || || | Sbjct: 832 acacgagtaagacagcattgatacagccatcattctctgggttgtttgtaacttgtgcat 773 Query: 288 atttgccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 347 |||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 772 atttaccccaaacaacttttccagcaggggttaccagaccaagttcactaacgttcacct 713 Query: 348 cgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttt 407 | || || |||||||| |||| ||||||||||| || ||||||| |||| |||||||||| Sbjct: 712 caatgatagttccccttgtcaaaacaccaagagtagagtacatttgaccatttgggtttt 653 Query: 408 tcttcacagaaattatgtcgaggttgaacgtacattttcagttcanggtgagtcacatga 467 ||||||||||||||||||| |||||||| ||||| |||||| ||| ||||||| ||||| Sbjct: 652 tcttcacagaaattatgtcaaggttgaaagtaca-tttcagctcagggtgagtaacatgg 594 Query: 468 gccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttcctt 527 ||||| |||||||| || ||||| || | || |||| |||||||||||||| |||||| Sbjct: 593 gcctttgtgaaacgaaggccagttggcctaataaaccgttcatactttggtggtttcctt 534 Query: 528 gtaaatccagg 538 ||||| ||||| Sbjct: 533 gtaaacccagg 523
>dbj|AK103678.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136C23, full insert sequence Length = 1225 Score = 317 bits (160), Expect = 2e-83 Identities = 274/311 (88%), Gaps = 1/311 (0%) Strand = Plus / Minus Query: 228 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 287 ||||||| ||||||||||||||||||||||||||||| ||||| |||||||| || || | Sbjct: 833 acacgagtaagacagcattgatacagccatcattctctgggttgtttgtaacttgtgcat 774 Query: 288 atttgccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 347 |||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 773 atttaccccaaacaacttttccagcaggggttaccagaccaagttcactaacgttcacct 714 Query: 348 cgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttt 407 | || || |||||||| |||| ||||||||||| || ||||||| |||| |||||||||| Sbjct: 713 caatgatagttccccttgtcaaaacaccaagagtagagtacatttgaccatttgggtttt 654 Query: 408 tcttcacagaaattatgtcgaggttgaacgtacattttcagttcanggtgagtcacatga 467 ||||||||||||||||||| |||||||| ||||| |||||| ||| ||||||| ||||| Sbjct: 653 tcttcacagaaattatgtcaaggttgaaagtaca-tttcagctcagggtgagtaacatgg 595 Query: 468 gccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttcctt 527 ||||| |||||||| || ||||| || | || |||| |||||||||||||| |||||| Sbjct: 594 gcctttgtgaaacgaaggccagttggcctaataaaccgttcatactttggtggtttcctt 535 Query: 528 gtaaatccagg 538 ||||| ||||| Sbjct: 534 gtaaacccagg 524
>gb|BT024045.1| Zea mays clone EL01N0430D01 mRNA sequence Length = 1191 Score = 317 bits (160), Expect = 2e-83 Identities = 276/311 (88%), Gaps = 3/311 (0%) Strand = Plus / Minus Query: 228 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 287 |||| ||||| |||||||||||||| ||||||||||||||||| |||||||| ||||| | Sbjct: 940 acactagcaaaacagcattgatacacccatcattctccgggttgtttgtaacttgagcat 881 Query: 288 atttgccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 347 |||| |||||||||||||||||||| || ||||| |||||||| ||||| ||||| |||| Sbjct: 880 atttcccccaaacaacttttccagcgggagttaccagaccaagctcactgacatttacct 821 Query: 348 cgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttt 407 | || |||| |||||| |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 820 caatgattggtccccttgtcataacaccaagagaagtgtacatcggaccatttgggtttt 761 Query: 408 tcttcacagaaattatgtcgaggttgaacgtacattttcagttcanggtgagtcacatga 467 ||||||||||||||||||| ||| |||| || || |||||||| || ||||||||||| Sbjct: 760 tcttcacagaaattatgtcaagggtgaaagtgca-cttcagttctgggggagtcacatga 702 Query: 468 gcc-ttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttcct 526 ||| |||||| |||||| |||||| ||||| ||||||| ||||||||||||||| ||||| Sbjct: 701 gcctttggtg-aacgcataccagttggtcgaatgaaccgctcatactttggtggtttcct 643 Query: 527 tgtaaatccag 537 ||||||||||| Sbjct: 642 tgtaaatccag 632
>dbj|AK060100.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-H11, full insert sequence Length = 1041 Score = 317 bits (160), Expect = 2e-83 Identities = 274/311 (88%), Gaps = 1/311 (0%) Strand = Plus / Minus Query: 228 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 287 ||||||| ||||||||||||||||||||||||||||| ||||| |||||||| || || | Sbjct: 832 acacgagtaagacagcattgatacagccatcattctctgggttgtttgtaacttgtgcat 773 Query: 288 atttgccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 347 |||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 772 atttaccccaaacaacttttccagcaggggttaccagaccaagttcactaacgttcacct 713 Query: 348 cgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttt 407 | || || |||||||| |||| ||||||||||| || ||||||| |||| |||||||||| Sbjct: 712 caatgatagttccccttgtcaaaacaccaagagtagagtacatttgaccatttgggtttt 653 Query: 408 tcttcacagaaattatgtcgaggttgaacgtacattttcagttcanggtgagtcacatga 467 ||||||||||||||||||| |||||||| ||||| |||||| ||| ||||||| ||||| Sbjct: 652 tcttcacagaaattatgtcaaggttgaaagtaca-tttcagctcagggtgagtaacatgg 594 Query: 468 gccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttcctt 527 ||||| |||||||| || ||||| || | || |||| |||||||||||||| |||||| Sbjct: 593 gcctttgtgaaacgaaggccagttggcctaataaaccgttcatactttggtggtttcctt 534 Query: 528 gtaaatccagg 538 ||||| ||||| Sbjct: 533 gtaaacccagg 523
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 159 bits (80), Expect = 1e-35 Identities = 158/183 (86%), Gaps = 1/183 (0%) Strand = Plus / Plus Query: 356 gttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttttcttcaca 415 |||||||| |||| ||||||||||| || ||||||| |||| |||||||||||||||||| Sbjct: 28395867 gttccccttgtcaaaacaccaagagtagagtacatttgaccatttgggtttttcttcaca 28395926 Query: 416 gaaattatgtcgaggttgaacgtacattttcagttcanggtgagtcacatgagccttggt 475 ||||||||||| |||||||| ||||| |||||| ||| ||||||| ||||| ||||| || Sbjct: 28395927 gaaattatgtcaaggttgaaagtaca-tttcagctcagggtgagtaacatgggcctttgt 28395985 Query: 476 gaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttccttgtaaatcc 535 |||||| || ||||| || | || |||| |||||||||||||| ||||||||||| || Sbjct: 28395986 gaaacgaaggccagttggcctaataaaccgttcatactttggtggtttccttgtaaaccc 28396045 Query: 536 agg 538 ||| Sbjct: 28396046 agg 28396048 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 293 ccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 347 ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 28395523 ccccaaacaacttttccagcaggggttaccagaccaagttcactaacgttcacct 28395577 Score = 79.8 bits (40), Expect = 8e-12 Identities = 49/52 (94%) Strand = Plus / Plus Query: 228 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaac 279 ||||||| ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 28395371 acacgagtaagacagcattgatacagccatcattctctgggttgtttgtaac 28395422
>dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0470D12 Length = 157248 Score = 159 bits (80), Expect = 1e-35 Identities = 158/183 (86%), Gaps = 1/183 (0%) Strand = Plus / Plus Query: 356 gttcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttttcttcaca 415 |||||||| |||| ||||||||||| || ||||||| |||| |||||||||||||||||| Sbjct: 121430 gttccccttgtcaaaacaccaagagtagagtacatttgaccatttgggtttttcttcaca 121489 Query: 416 gaaattatgtcgaggttgaacgtacattttcagttcanggtgagtcacatgagccttggt 475 ||||||||||| |||||||| ||||| |||||| ||| ||||||| ||||| ||||| || Sbjct: 121490 gaaattatgtcaaggttgaaagtaca-tttcagctcagggtgagtaacatgggcctttgt 121548 Query: 476 gaaacgcagaccagtaggtcggatgaacctctcatactttggtggcttccttgtaaatcc 535 |||||| || ||||| || | || |||| |||||||||||||| ||||||||||| || Sbjct: 121549 gaaacgaaggccagttggcctaataaaccgttcatactttggtggtttccttgtaaaccc 121608 Query: 536 agg 538 ||| Sbjct: 121609 agg 121611 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 293 ccccaaacaacttttccagcaggggttacgagaccaagttcactaacattcacct 347 ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 121086 ccccaaacaacttttccagcaggggttaccagaccaagttcactaacgttcacct 121140 Score = 79.8 bits (40), Expect = 8e-12 Identities = 49/52 (94%) Strand = Plus / Plus Query: 228 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaac 279 ||||||| ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 120934 acacgagtaagacagcattgatacagccatcattctctgggttgtttgtaac 120985
>emb|BX831560.1|CNS09ZPB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH15ZE08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1012 Score = 133 bits (67), Expect = 7e-28 Identities = 238/294 (80%), Gaps = 1/294 (0%) Strand = Plus / Minus Query: 239 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 298 |||||||| ||||| || || ||||| || || ||||| || ||||||||||| ||||| Sbjct: 822 acagcatttatacatccgtcgttctctggattgtttgtcacttgagcgtattttccccag 763 Query: 299 acaacttttccagcaggggttacgagaccaagttcactaacattcacctcgataattgtt 358 ||||| |||||||| || || || |||||||| ||||| ||||| |||||||| |||||| Sbjct: 762 acaacctttccagctggtgtaacaagaccaagctcactcacattgacctcgatgattgtt 703 Query: 359 cccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttttcttcacagaa 418 ||||| ||||| ||||| || || || ||||| |||||||| || || ||||| | Sbjct: 702 cccctggtcatcacaccgagtgatgtatacatgggaccgttaggattcttcttaatcccg 643 Query: 419 attatgtcgaggttgaacgtacattttcagttcanggtgagtcacatgagccttggtgaa 478 || || ||||| ||| || |||||| |||||| ||||||| || || ||||||||||| Sbjct: 642 atgatctcgagacagaaagtgcatttt-agttcagggtgagtaacgtgggccttggtgaa 584 Query: 479 acgcagaccagtaggtcggatgaacctctcatactttggtggcttccttgtaaa 532 ||| ||||||| || |||||||| | ||| |||||||| |||||||||||||| Sbjct: 583 acgaagaccagatggacggatgaaacgctcgtactttggaggcttccttgtaaa 530
>ref|NM_120719.2| Arabidopsis thaliana structural constituent of ribosome AT5G06360 mRNA, complete cds Length = 1059 Score = 127 bits (64), Expect = 4e-26 Identities = 235/291 (80%), Gaps = 1/291 (0%) Strand = Plus / Minus Query: 239 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 298 |||||||| ||||| || || ||||| || || ||||| || ||||||||||| ||||| Sbjct: 834 acagcatttatacatccgtcgttctctggattgtttgtcacttgagcgtattttccccag 775 Query: 299 acaacttttccagcaggggttacgagaccaagttcactaacattcacctcgataattgtt 358 ||||| |||||||| || || || |||||||| ||||| ||||| |||||||| |||||| Sbjct: 774 acaacctttccagctggtgtaacaagaccaagctcactcacattgacctcgatgattgtt 715 Query: 359 cccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttttcttcacagaa 418 ||||| ||||| ||||| || || || ||||| |||||||| || || ||||| | Sbjct: 714 cccctggtcatcacaccgagtgatgtatacatgggaccgttaggattcttcttaatcccg 655 Query: 419 attatgtcgaggttgaacgtacattttcagttcanggtgagtcacatgagccttggtgaa 478 || || ||||| ||| || |||||| |||||| ||||||| || || ||||||||||| Sbjct: 654 atgatctcgagacagaaagtgcatttt-agttcagggtgagtgacgtgggccttggtgaa 596 Query: 479 acgcagaccagtaggtcggatgaacctctcatactttggtggcttccttgt 529 ||| ||||||| || |||||||| | ||| |||||||| ||||||||||| Sbjct: 595 acgaagaccagatggacggatgaaacgctcgtactttggaggcttccttgt 545
>gb|AY114052.1| Arabidopsis thaliana unknown protein (At5g06360) mRNA, complete cds Length = 814 Score = 127 bits (64), Expect = 4e-26 Identities = 235/291 (80%), Gaps = 1/291 (0%) Strand = Plus / Minus Query: 239 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 298 |||||||| ||||| || || ||||| || || ||||| || ||||||||||| ||||| Sbjct: 770 acagcatttatacatccgtcgttctctggattgtttgtcacttgagcgtattttccccag 711 Query: 299 acaacttttccagcaggggttacgagaccaagttcactaacattcacctcgataattgtt 358 ||||| |||||||| || || || |||||||| ||||| ||||| |||||||| |||||| Sbjct: 710 acaacctttccagctggtgtaacaagaccaagctcactcacattgacctcgatgattgtt 651 Query: 359 cccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttttcttcacagaa 418 ||||| ||||| ||||| || || || ||||| |||||||| || || ||||| | Sbjct: 650 cccctggtcatcacaccgagtgatgtatacatgggaccgttaggattcttcttaatcccg 591 Query: 419 attatgtcgaggttgaacgtacattttcagttcanggtgagtcacatgagccttggtgaa 478 || || ||||| ||| || |||||| |||||| ||||||| || || ||||||||||| Sbjct: 590 atgatctcgagacagaaagtgcatttt-agttcagggtgagtgacgtgggccttggtgaa 532 Query: 479 acgcagaccagtaggtcggatgaacctctcatactttggtggcttccttgt 529 ||| ||||||| || |||||||| | ||| |||||||| ||||||||||| Sbjct: 531 acgaagaccagatggacggatgaaacgctcgtactttggaggcttccttgt 481
>gb|AY059725.1| Arabidopsis thaliana unknown protein (At5g06360) mRNA, complete cds Length = 999 Score = 127 bits (64), Expect = 4e-26 Identities = 235/291 (80%), Gaps = 1/291 (0%) Strand = Plus / Minus Query: 239 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 298 |||||||| ||||| || || ||||| || || ||||| || ||||||||||| ||||| Sbjct: 825 acagcatttatacatccgtcgttctctggattgtttgtcacttgagcgtattttccccag 766 Query: 299 acaacttttccagcaggggttacgagaccaagttcactaacattcacctcgataattgtt 358 ||||| |||||||| || || || |||||||| ||||| ||||| |||||||| |||||| Sbjct: 765 acaacctttccagctggtgtaacaagaccaagctcactcacattgacctcgatgattgtt 706 Query: 359 cccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttttcttcacagaa 418 ||||| ||||| ||||| || || || ||||| |||||||| || || ||||| | Sbjct: 705 cccctggtcatcacaccgagtgatgtatacatgggaccgttaggattcttcttaatcccg 646 Query: 419 attatgtcgaggttgaacgtacattttcagttcanggtgagtcacatgagccttggtgaa 478 || || ||||| ||| || |||||| |||||| ||||||| || || ||||||||||| Sbjct: 645 atgatctcgagacagaaagtgcatttt-agttcagggtgagtgacgtgggccttggtgaa 587 Query: 479 acgcagaccagtaggtcggatgaacctctcatactttggtggcttccttgt 529 ||| ||||||| || |||||||| | ||| |||||||| ||||||||||| Sbjct: 586 acgaagaccagatggacggatgaaacgctcgtactttggaggcttccttgt 536
>emb|BX831075.1|CNS09ZF5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS55ZF06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 983 Score = 127 bits (64), Expect = 4e-26 Identities = 235/291 (80%), Gaps = 1/291 (0%) Strand = Plus / Minus Query: 239 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 298 |||||||| ||||| || || ||||| || || ||||| || ||||||||||| ||||| Sbjct: 825 acagcatttatacatccgtcgttctctggattgtttgtcacttgagcgtattttccccag 766 Query: 299 acaacttttccagcaggggttacgagaccaagttcactaacattcacctcgataattgtt 358 ||||| |||||||| || || || |||||||| ||||| ||||| |||||||| |||||| Sbjct: 765 acaacctttccagctggtgtaacaagaccaagctcactcacattgacctcgatgattgtt 706 Query: 359 cccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttttcttcacagaa 418 ||||| ||||| ||||| || || || ||||| |||||||| || || ||||| | Sbjct: 705 cccctggtcatcacaccgagtgatgtatacatgggaccgttaggattcttcttaatcccg 646 Query: 419 attatgtcgaggttgaacgtacattttcagttcanggtgagtcacatgagccttggtgaa 478 || || ||||| ||| || |||||| |||||| ||||||| || || ||||||||||| Sbjct: 645 atgatctcgagacagaaagtgcatttt-agttcagggtgagtgacgtgggccttggtgaa 587 Query: 479 acgcagaccagtaggtcggatgaacctctcatactttggtggcttccttgt 529 ||| ||||||| || |||||||| | ||| |||||||| ||||||||||| Sbjct: 586 acgaagaccagatggacggatgaaacgctcgtactttggaggcttccttgt 536
>gb|AY085454.1| Arabidopsis thaliana clone 15229 mRNA, complete sequence Length = 1056 Score = 127 bits (64), Expect = 4e-26 Identities = 235/291 (80%), Gaps = 1/291 (0%) Strand = Plus / Minus Query: 239 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 298 |||||||| ||||| || || ||||| || || ||||| || ||||||||||| ||||| Sbjct: 831 acagcatttatacatccgtcgttctctggattgtttgtcacttgagcgtattttccccag 772 Query: 299 acaacttttccagcaggggttacgagaccaagttcactaacattcacctcgataattgtt 358 ||||| |||||||| || || || |||||||| ||||| ||||| |||||||| |||||| Sbjct: 771 acaacctttccagctggtgtaacaagaccaagctcactcacattgacctcgatgattgtt 712 Query: 359 cccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttttcttcacagaa 418 ||||| ||||| ||||| || || || ||||| |||||||| || || ||||| | Sbjct: 711 cccctggtcatcacaccgagtgatgtatacatgggaccgttaggattcttcttaatcccg 652 Query: 419 attatgtcgaggttgaacgtacattttcagttcanggtgagtcacatgagccttggtgaa 478 || || ||||| ||| || |||||| |||||| ||||||| || || ||||||||||| Sbjct: 651 atgatctcgagacagaaagtgcatttt-agttcagggtgagtgacgtgggccttggtgaa 593 Query: 479 acgcagaccagtaggtcggatgaacctctcatactttggtggcttccttgt 529 ||| ||||||| || |||||||| | ||| |||||||| ||||||||||| Sbjct: 592 acgaagaccagatgggcggatgaaacgctcgtactttggaggcttccttgt 542
>dbj|AP006541.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjB06D23, BM0787, complete sequence Length = 102734 Score = 105 bits (53), Expect = 1e-19 Identities = 161/196 (82%), Gaps = 1/196 (0%) Strand = Plus / Plus Query: 343 cacctcgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgg 402 |||||| ||||| |||||| | ||||| ||||||||||| |||||||| || || || || Sbjct: 55302 cacctcaataatagttcccttggtcatgacaccaagagaggtgtacatagggccattagg 55361 Query: 403 gtttttcttcacagaaattatgtcgaggttgaacgtacattttcagttcanggtgagtca 462 |||||||||||| |||||| || || ||||| || ||||| ||||| | ||||| | Sbjct: 55362 gtttttcttcactccaattatttctagattgaatgtgcattta-agttctggatgagtga 55420 Query: 463 catgagccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggct 522 ||||||| |||||||| ||||| |||||||| || ||||||| |||||||||||| || | Sbjct: 55421 catgagctttggtgaatcgcagtccagtaggacgaatgaaccgctcatactttggaggtt 55480 Query: 523 tccttgtaaatccagg 538 | || ||||| ||||| Sbjct: 55481 ttctagtaaaaccagg 55496 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 233 agcaagacagcattgatacagccatcattctccgggttatttgtaacctgagc 285 |||||||||||||| ||||| |||||||| || |||||||| ||||||||||| Sbjct: 55008 agcaagacagcatttatacaaccatcattttctgggttattggtaacctgagc 55060 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Plus Query: 293 ccccaaacaacttttccagcaggggttacgagaccaagttcact 336 ||||| ||||||||||| ||||| || || |||||||||||||| Sbjct: 55159 ccccacacaacttttcctgcaggagtgaccagaccaagttcact 55202
>dbj|AP006538.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT18J10, TM0323a, complete sequence Length = 95559 Score = 105 bits (53), Expect = 1e-19 Identities = 161/196 (82%), Gaps = 1/196 (0%) Strand = Plus / Plus Query: 343 cacctcgataattgttcccctcgtcataacaccaagagaagtgtacattggaccgtttgg 402 |||||| ||||| |||||| | ||||| ||||||||||| |||||||| || || || || Sbjct: 20417 cacctcaataatagttcccttggtcatgacaccaagagaggtgtacatagggccattagg 20476 Query: 403 gtttttcttcacagaaattatgtcgaggttgaacgtacattttcagttcanggtgagtca 462 |||||||||||| |||||| || || ||||| || ||||| ||||| | ||||| | Sbjct: 20477 gtttttcttcactccaattatttctagattgaatgtgcattta-agttctggatgagtga 20535 Query: 463 catgagccttggtgaaacgcagaccagtaggtcggatgaacctctcatactttggtggct 522 ||||||| |||||||| ||||| |||||||| || ||||||| |||||||||||| || | Sbjct: 20536 catgagctttggtgaatcgcagtccagtaggacgaatgaaccgctcatactttggaggtt 20595 Query: 523 tccttgtaaatccagg 538 | || ||||| ||||| Sbjct: 20596 ttctagtaaaaccagg 20611 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 233 agcaagacagcattgatacagccatcattctccgggttatttgtaacctgagc 285 |||||||||||||| ||||| |||||||| || |||||||| ||||||||||| Sbjct: 20123 agcaagacagcatttatacaaccatcattttctgggttattggtaacctgagc 20175 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Plus Query: 293 ccccaaacaacttttccagcaggggttacgagaccaagttcact 336 ||||| ||||||||||| ||||| || || |||||||||||||| Sbjct: 20274 ccccacacaacttttcctgcaggagtgaccagaccaagttcact 20317
>emb|BX831803.1|CNS09ZT9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH30ZE06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1007 Score = 89.7 bits (45), Expect = 9e-15 Identities = 232/292 (79%), Gaps = 2/292 (0%) Strand = Plus / Minus Query: 239 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 298 |||||||| ||||| || || ||||| || || ||||| || ||||||||||| ||||| Sbjct: 828 acagcatttatacatccgtcgttctctggattgtttgtcacttgagcgtattttccccag 769 Query: 299 acaacttt-tccagcaggggttacgagaccaagttcactaacattcacctcgataattgt 357 ||||| || |||||| || || || |||||||| ||||| ||||| |||||||| ||||| Sbjct: 768 acaaccttatccagctggtgtaacaagaccaagctcactcacattgacctcgatgattgt 709 Query: 358 tcccctcgtcataacaccaagagaagtgtacattggaccgtttgggtttttcttcacaga 417 |||||| || || ||||| || | || ||||| |||||||| || || ||||| | Sbjct: 708 tcccctggtaatcacaccgagttatgtatacatgggaccgttaggattcttcttaatccc 649 Query: 418 aattatgtcgaggttgaacgtacattttcagttcanggtgagtcacatgagccttggtga 477 || || ||||| ||| || |||||| |||||| ||||||| || || |||||||||| Sbjct: 648 gatgatctcgagacagaaagtgcatttt-agttcagggtgagttacgtgggccttggtga 590 Query: 478 aacgcagaccagtaggtcggatgaacctctcatactttggtggcttccttgt 529 |||| |||| || || |||||||| | ||| |||||||| ||||||||||| Sbjct: 589 aacgaagactagatggacggatgaaacgctcgtactttggaggcttccttgt 538
>ref|XM_950402.1| Theileria annulata strain Ankara tgf beta-inducible nuclear protein 1 (TA18362) partial mRNA Length = 780 Score = 71.9 bits (36), Expect = 2e-09 Identities = 99/120 (82%) Strand = Plus / Minus Query: 241 agcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaac 300 |||||||||||| |||||||| || || ||||||||||| ||||| |||||| |||||| Sbjct: 765 agcattgatacacccatcattttcgggattatttgtaacttgagcatatttggcccaaat 706 Query: 301 aacttttccagcaggggttacgagaccaagttcactaacattcacctcgataattgttcc 360 |||||||| | | ||||| | ||| |||||||| |||||||| || || |||||||| Sbjct: 705 gacttttcctgtctgtgttaccaaacccagttcactcacattcacttcaattattgttcc 646
>ref|XM_778150.1| PREDICTED: Strongylocentrotus purpuratus similar to TGF beta-inducible nuclear protein 1 (Hairy cell leukemia protein 1) (HUSSY-29) (LOC577954), mRNA Length = 859 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 238 gacagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgcccca 297 |||||||||||| ||||||||||| || ||||||||||| || || || ||||| ||||| Sbjct: 847 gacagcattgatgcagccatcattttcagggttatttgtgacttgcgcatatttacccca 788 Query: 298 aacaacttttcc 309 ||||||||||| Sbjct: 787 gacaacttttcc 776
>dbj|AB006700.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHF15 Length = 83865 Score = 71.9 bits (36), Expect = 2e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 447 agttcanggtgagtcacatgagccttggtgaaacgcagaccagtaggtcggatgaacctc 506 |||||| ||||||| || || |||||||||||||| ||||||| || |||||||| | | Sbjct: 54597 agttcagggtgagtgacgtgggccttggtgaaacgaagaccagatggacggatgaaacgc 54538 Query: 507 tcatactttggtggcttccttgt 529 || |||||||| ||||||||||| Sbjct: 54537 tcgtactttggaggcttccttgt 54515
>emb|BX832734.1|CNS09ZR3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH93ZC02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 916 Score = 69.9 bits (35), Expect = 8e-09 Identities = 128/159 (80%) Strand = Plus / Minus Query: 241 agcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaac 300 |||||| ||||| || || ||||| || || ||||| || ||| | ||||| ||||| || Sbjct: 767 agcatttatacatccgtcgttctctggattgtttgtcacttgaacatattttccccagac 708 Query: 301 aacttttccagcaggggttacgagaccaagttcactaacattcacctcgataattgttcc 360 ||| |||||||| || || || ||||||| |||| ||||| |||||||| |||||||| Sbjct: 707 aacctttccagctggtgtcacacgaccaagcgcactcacattgacctcgatgattgttcc 648 Query: 361 cctcgtcataacaccaagagaagtgtacattggaccgtt 399 ||| ||||| ||||| || || || ||||| |||||||| Sbjct: 647 cctggtcatcacaccgagtgatgtatacatgggaccgtt 609 Score = 48.1 bits (24), Expect = 0.030 Identities = 38/43 (88%) Strand = Plus / Minus Query: 447 agttcanggtgagtcacatgagccttggtgaaacgcagaccag 489 |||||| ||||||| || || |||||||||||||| ||||||| Sbjct: 562 agttcagggtgagtgacgtgggccttggtgaaacgaagaccag 520
>gb|AY706155.1| Aplysia californica TGF beta-inducible nuclear protein mRNA, complete cds Length = 878 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 226 tcacacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagc 285 |||||| | ||| ||||| ||||| ||||||||||| ||||| || || || || ||||| Sbjct: 812 tcacactaacaacacagcgttgatgcagccatcattttccggattgttggtcacttgagc 753 Query: 286 gtatttgccccaaacaacttttccag 311 |||||| ||||| ||||||||||||| Sbjct: 752 gtatttaccccacacaacttttccag 727
>gb|DQ424947.1| Bombyx mori TGF beta-inducible nuclear protein 1 (TINP1) mRNA, complete cds Length = 1383 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 239 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 298 |||||||| || |||||||||||||| || ||||| || || ||||||||||| ||||| Sbjct: 1159 acagcattaatgcagccatcattctctggattattcgtgacttgagcgtatttaccccac 1100 Query: 299 acaacttttccagc 312 |||||||| ||||| Sbjct: 1099 acaactttaccagc 1086
>gb|DQ311226.1| Bombyx mori hairy cell leukemia protein 1 mRNA, complete cds Length = 1380 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 239 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 298 |||||||| || |||||||||||||| || ||||| || || ||||||||||| ||||| Sbjct: 1161 acagcattaatgcagccatcattctctggattattcgtgacttgagcgtatttaccccac 1102 Query: 299 acaacttttccagc 312 |||||||| ||||| Sbjct: 1101 acaactttaccagc 1088
>ref|XM_381311.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01135.1) partial mRNA Length = 783 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Minus Query: 245 ttgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaacaact 304 ||||| ||||| || ||||| |||||||| || ||||||||||| ||||||||||| Sbjct: 764 ttgatgcagccctcgttctctgggttattggtgacctgagcgtagcgaccccaaacaacc 705 Query: 305 tttccagcaggggttacgagaccaagttcactaacattcacctcgat 351 |||||| ||| ||| || ||||||||||| || || || |||||||| Sbjct: 704 tttccaccagcggtgaccagaccaagttcgctgacgttgacctcgat 658
>gb|BC073255.1| Xenopus laevis cDNA clone MGC:80606 IMAGE:5506003, complete cds Length = 1003 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 242 gcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaaca 301 ||||| |||||||||||||| || || |||||||| || || || ||||| ||||||||| Sbjct: 927 gcatttatacagccatcattttctggattatttgtgacttgtgcatatttaccccaaaca 868 Query: 302 acttt 306 ||||| Sbjct: 867 acttt 863
>gb|AY281348.1| Xenopus laevis HMG-box protein HMG2L1 (HMG2L1) mRNA, complete cds Length = 2626 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 242 gcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaaca 301 ||||| |||||||||||||| || || |||||||| || || || ||||| ||||||||| Sbjct: 548 gcatttatacagccatcattttctggattatttgtgacttgtgcatatttaccccaaaca 489 Query: 302 acttt 306 ||||| Sbjct: 488 acttt 484
>gb|BC046083.1| Danio rerio zgc:56334, mRNA (cDNA clone MGC:56334 IMAGE:5603772), complete cds Length = 1194 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 233 agcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttg 292 ||||| || ||||| |||||||||||||| || |||||||| || ||||| |||||||| Sbjct: 916 agcaacacggcattaatacagccatcattttctgggttattcgtcacctgggcgtattta 857 Query: 293 cccca 297 ||||| Sbjct: 856 cccca 852
>ref|NM_199568.1| Danio rerio zgc:56334 (zgc:56334), mRNA Length = 1194 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 233 agcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttg 292 ||||| || ||||| |||||||||||||| || |||||||| || ||||| |||||||| Sbjct: 916 agcaacacggcattaatacagccatcattttctgggttattcgtcacctgggcgtattta 857 Query: 293 cccca 297 ||||| Sbjct: 856 cccca 852
>ref|XM_779898.1| PREDICTED: Strongylocentrotus purpuratus similar to TGF beta-inducible nuclear protein 1 (CDK105 protein) (LOC579803), mRNA Length = 318 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 238 gacagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgcccca 297 |||||| ||||| |||||||| || || ||||||||||| || || || ||||| ||||| Sbjct: 306 gacagcgttgatgcagccatcgttttcagggttatttgtgacttgcgcatatttacccca 247 Query: 298 aacaacttttcc 309 ||||||||||| Sbjct: 246 gacaacttttcc 235
>emb|X69119.1|DMUQ80FP D.melanogaster gene for ubiquitin-80 fusion protein Length = 5329 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 278 acctgagcgtatttgccccaaacaacttttcc 309 |||||||||||||||||||| ||||||||||| Sbjct: 4047 acctgagcgtatttgccccagacaacttttcc 4016
>gb|AY118472.1| Drosophila melanogaster GM13959 full insert cDNA Length = 907 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 278 acctgagcgtatttgccccaaacaacttttcc 309 |||||||||||||||||||| ||||||||||| Sbjct: 763 acctgagcgtatttgccccagacaacttttcc 732
>ref|NM_058031.4| Drosophila melanogaster Intronic Protein 259 CG5277-RA (Ip259), mRNA Length = 900 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 278 acctgagcgtatttgccccaaacaacttttcc 309 |||||||||||||||||||| ||||||||||| Sbjct: 790 acctgagcgtatttgccccagacaacttttcc 759
>emb|BX832733.1|CNS09ZQF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH93ZB03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1028 Score = 56.0 bits (28), Expect = 1e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 447 agttcanggtgagtcacatgagccttggtgaaacgcagaccagtaggtcggatgaacctc 506 |||||| ||||||| || || |||||||||||||| ||||||| || ||||||| | | Sbjct: 606 agttcagggtgagtgacgtgggccttggtgaaacgaagaccagatggacggatgacacgc 547 Query: 507 tcatactttggtggcttccttgt 529 || | |||||| ||||||||||| Sbjct: 546 tcgtgctttggaggcttccttgt 524
>gb|AC007451.1|AC007451 Drosophila melanogaster, chromosome 2L, region 31D1-31F4, BAC clones DS00953 and BACR48K04, complete sequence Length = 161754 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 278 acctgagcgtatttgccccaaacaacttttcc 309 |||||||||||||||||||| ||||||||||| Sbjct: 69341 acctgagcgtatttgccccagacaacttttcc 69310
>gb|AE003628.2| Drosophila melanogaster chromosome 2L, section 37 of 83 of the complete sequence Length = 269102 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 278 acctgagcgtatttgccccaaacaacttttcc 309 |||||||||||||||||||| ||||||||||| Sbjct: 171609 acctgagcgtatttgccccagacaacttttcc 171578
>gb|U56257.1|DMU56257 Drosophila melanogaster intronic protein 259 (IP259) gene, complete cds Length = 1367 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 278 acctgagcgtatttgccccaaacaacttttcc 309 |||||||||||||||||||| ||||||||||| Sbjct: 1130 acctgagcgtatttgccccagacaacttttcc 1099
>ref|XM_623623.1| PREDICTED: Apis mellifera similar to CG5277-PA (LOC551230), mRNA Length = 780 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 241 agcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaac 300 |||||| || || |||||||| || || ||||||||||| ||||| ||||| |||||||| Sbjct: 765 agcatttatgcaaccatcattttcaggattatttgtaacttgagcatattttccccaaac 706 Query: 301 aacttt 306 ||||| Sbjct: 705 cacttt 700
>emb|AM260497.1| Platanus acerifolia partial mRNA for TGF-beta inducible protein (tgf gene) Length = 660 Score = 52.0 bits (26), Expect = 0.002 Identities = 76/93 (81%) Strand = Plus / Minus Query: 443 tttcagttcanggtgagtcacatgagccttggtgaaacgcagaccagtaggtcggatgaa 502 ||||| |||| |||| ||||| || || ||||||||||||| || | || || ||||| Sbjct: 605 tttcaattcagggtgtgtcacgtgggctttggtgaaacgcaagcctgatggacgaatgaa 546 Query: 503 cctctcatactttggtggcttccttgtaaatcc 535 | |||||||||||| ||||| ||||||||||| Sbjct: 545 acgctcatactttggaggctttcttgtaaatcc 513
>gb|AY438655.1| Quercus robur TGF-beta inducible protein gene, partial cds and 3' UTR Length = 634 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 239 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtattt 291 ||||| || ||||| ||||||||||| ||||||||||| || ||||| ||||| Sbjct: 430 acagcgtttatacaaccatcattctcagggttatttgtcacttgagcatattt 378
>ref|XM_711546.1| Candida albicans SC5314 putative ribosome maturation factor (CaO19_7398), mRNA Length = 390 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 281 tgagcgtatttgccccaaacaacttt 306 ||||||||||| |||||||||||||| Sbjct: 335 tgagcgtatttaccccaaacaacttt 310
>ref|XM_710995.1| Candida albicans SC5314 putative ribosome maturation factor (CaO19_7424), mRNA Length = 786 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 281 tgagcgtatttgccccaaacaacttt 306 ||||||||||| |||||||||||||| Sbjct: 731 tgagcgtatttaccccaaacaacttt 706
>ref|XM_813522.1| Trypanosoma cruzi strain CL Brener 40S ribosomal protein S8 (Tc00.1047053508231.200) partial mRNA Length = 783 Score = 44.1 bits (22), Expect = 0.47 Identities = 58/70 (82%) Strand = Plus / Minus Query: 228 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 287 |||| ||||| || |||||||| ||||| || ||||||||||| || || ||||| |||| Sbjct: 781 acaccagcaacacggcattgatgcagccgtcgttctccgggttgttagttacctgcgcgt 722 Query: 288 atttgcccca 297 | || ||||| Sbjct: 721 actttcccca 712
>ref|XM_801572.1| Trypanosoma cruzi strain CL Brener 40S ribosomal protein S8 (Tc00.1047053506249.60) partial mRNA Length = 783 Score = 44.1 bits (22), Expect = 0.47 Identities = 58/70 (82%) Strand = Plus / Minus Query: 228 acacgagcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgt 287 |||| ||||| || |||||||| ||||| || ||||||||||| || || ||||| |||| Sbjct: 781 acaccagcaacacggcattgatgcagccgtcgttctccgggttgttagttacctgcgcgt 722 Query: 288 atttgcccca 297 | || ||||| Sbjct: 721 actttcccca 712
>dbj|AK115831.1| Ciona intestinalis cDNA, clone:cilv028h09, full insert sequence Length = 1063 Score = 44.1 bits (22), Expect = 0.47 Identities = 61/74 (82%) Strand = Plus / Minus Query: 233 agcaagacagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttg 292 ||||| |||||||| |||||||||||||| || || || || || || || || ||||| Sbjct: 708 agcaacacagcattaatacagccatcattttcaggattgttcgtgacttgtgcatatttt 649 Query: 293 ccccaaacaacttt 306 ||||||| |||||| Sbjct: 648 ccccaaataacttt 635
>gb|U20260.1|GMU20260 Glycine max glutamate 1-semialdehyde aminotransferase (Gsa1) gene, complete cds Length = 1974 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 397 gtttgggtttttcttcacagaa 418 |||||||||||||||||||||| Sbjct: 1576 gtttgggtttttcttcacagaa 1597
>dbj|AP004484.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT06I17, TM0017, complete sequence Length = 121127 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 397 gtttgggtttttcttcacagaa 418 |||||||||||||||||||||| Sbjct: 79904 gtttgggtttttcttcacagaa 79925
>gb|L12453.1|SOYGSA Soybean glutamate 1-semialdehyde aminotransferase mRNA, complete cds Length = 1822 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 397 gtttgggtttttcttcacagaa 418 |||||||||||||||||||||| Sbjct: 1250 gtttgggtttttcttcacagaa 1271
>emb|AL117183.1|SPCP1E11 S.pombe chromosome III p1 clone p1E11 Length = 25057 Score = 42.1 bits (21), Expect = 1.8 Identities = 60/73 (82%) Strand = Plus / Minus Query: 281 tgagcgtatttgccccaaacaacttttccagcaggggttacgagaccaagttcactaaca 340 ||||| ||||| |||||||||||||| ||| ||| || || ||||| | |||||| ||| Sbjct: 20068 tgagcatatttaccccaaacaactttaccaccagatgtgacaagacctaattcactgaca 20009 Query: 341 ttcacctcgataa 353 || ||||| |||| Sbjct: 20008 ttaacctcaataa 19996
>emb|AJ719405.1| Gallus gallus mRNA for hypothetical protein, clone 2a2 Length = 1020 Score = 42.1 bits (21), Expect = 1.8 Identities = 54/65 (83%) Strand = Plus / Minus Query: 242 gcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaaca 301 ||||| |||||||||||||| || || || ||||| || || || ||||| ||||||| | Sbjct: 795 gcattaatacagccatcattttctggattgtttgttacttgtgcatattttccccaaata 736 Query: 302 acttt 306 ||||| Sbjct: 735 acttt 731
>ref|NM_001006579.1| Gallus gallus similar to TGF beta-inducible nuclear protein 1 (L-name related LNR42) (LOC427206), mRNA Length = 1020 Score = 42.1 bits (21), Expect = 1.8 Identities = 54/65 (83%) Strand = Plus / Minus Query: 242 gcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaaca 301 ||||| |||||||||||||| || || || ||||| || || || ||||| ||||||| | Sbjct: 795 gcattaatacagccatcattttctggattgtttgttacttgtgcatattttccccaaata 736 Query: 302 acttt 306 ||||| Sbjct: 735 acttt 731
>emb|CR523694.1| Gallus gallus finished cDNA, clone ChEST23p6 Length = 840 Score = 42.1 bits (21), Expect = 1.8 Identities = 54/65 (83%) Strand = Plus / Minus Query: 242 gcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaaca 301 ||||| |||||||||||||| || || || ||||| || || || ||||| ||||||| | Sbjct: 708 gcattaatacagccatcattttctggattgtttgttacttgtgcatattttccccaaata 649 Query: 302 acttt 306 ||||| Sbjct: 648 acttt 644
>emb|CR388679.1| Gallus gallus finished cDNA, clone ChEST387a6 Length = 785 Score = 42.1 bits (21), Expect = 1.8 Identities = 54/65 (83%) Strand = Plus / Minus Query: 242 gcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaaaca 301 ||||| |||||||||||||| || || || ||||| || || || ||||| ||||||| | Sbjct: 576 gcattaatacagccatcattttctggattgtttgttacttgtgcatattttccccaaata 517 Query: 302 acttt 306 ||||| Sbjct: 516 acttt 512
>ref|NM_001023548.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCP1E11.08), partial mRNA Length = 783 Score = 42.1 bits (21), Expect = 1.8 Identities = 60/73 (82%) Strand = Plus / Minus Query: 281 tgagcgtatttgccccaaacaacttttccagcaggggttacgagaccaagttcactaaca 340 ||||| ||||| |||||||||||||| ||| ||| || || ||||| | |||||| ||| Sbjct: 728 tgagcatatttaccccaaacaactttaccaccagatgtgacaagacctaattcactgaca 669 Query: 341 ttcacctcgataa 353 || ||||| |||| Sbjct: 668 ttaacctcaataa 656
>gb|AC005699.9|AC005699 Homo sapiens chromosome 4 clone C0473M13 map 4p16, complete sequence Length = 191904 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 404 tttttcttcacagaaattatg 424 ||||||||||||||||||||| Sbjct: 127068 tttttcttcacagaaattatg 127048
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 287 tatttgccccaaacaacttttccag 311 ||||| ||||||||||||||||||| Sbjct: 2872770 tatttaccccaaacaacttttccag 2872746
>gb|AC164111.4| Mus musculus BAC clone RP23-267E11 from chromosome 6, complete sequence Length = 179265 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gtcataacaccaagagaagt 384 |||||||||||||||||||| Sbjct: 134625 gtcataacaccaagagaagt 134606
>ref|NM_001031517.1| Gallus gallus ankyrin repeat and SOCS box-containing 3 (ASB3), mRNA Length = 2770 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cagtgcactcatcccttcaa 206 |||||||||||||||||||| Sbjct: 460 cagtgcactcatcccttcaa 441
>gb|AC138741.7| Mus musculus chromosome 1, clone RP24-260D21, complete sequence Length = 161846 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 gtctattccaaagacaagca 140 |||||||||||||||||||| Sbjct: 99757 gtctattccaaagacaagca 99738
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08, complete sequence Length = 119500 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cccaaacaacttttccagca 313 |||||||||||||||||||| Sbjct: 77654 cccaaacaacttttccagca 77673
>gb|U80846.1| Caenorhabditis elegans cosmid K06A9, complete sequence Length = 39573 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 ttgaacgtacattttcagtt 450 |||||||||||||||||||| Sbjct: 16930 ttgaacgtacattttcagtt 16911
>gb|AC124563.4| Mus musculus BAC clone RP23-206B15 from chromosome 6, complete sequence Length = 210092 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gtcataacaccaagagaagt 384 |||||||||||||||||||| Sbjct: 52579 gtcataacaccaagagaagt 52560
>ref|XM_646180.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein (173.t00011) partial mRNA Length = 783 Score = 40.1 bits (20), Expect = 7.3 Identities = 53/64 (82%) Strand = Plus / Minus Query: 239 acagcattgatacagccatcattctccgggttatttgtaacctgagcgtatttgccccaa 298 |||||||| || || |||||||| || || |||||||| || || || ||||||||||| Sbjct: 770 acagcattaatgcacccatcattttctggattatttgttacttgtgcatatttgccccat 711 Query: 299 acaa 302 |||| Sbjct: 710 acaa 707
>emb|AL450345.6| Human DNA sequence from clone RP11-300M24 on chromosome 6 Contains a novel gene, complete sequence Length = 183342 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 acaaaattgcccttgttaga 175 |||||||||||||||||||| Sbjct: 111619 acaaaattgcccttgttaga 111638
>emb|AL096701.14|HSA247I13 Human DNA sequence from clone RP11-247I13 on chromosome 22 Contains the 5' end of the DRG1 gene for developmentally regulated GTP binding protein 1, the EIF4ENIF1 gene foreukaryotic translation initiation factor 4E nuclear import factor 1, the 5' end of the gene for homolog of yeast Sfi1 (SFI1), a H2A histone family member Z (H2AFZ) pseudogene, a ribosomal protein S26 (RPS260) pseudogene, two novel genes and two CpG islands, complete sequence Length = 168110 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 acaacttttccagcaggggt 318 |||||||||||||||||||| Sbjct: 155785 acaacttttccagcaggggt 155804
>emb|AJ720837.1| Gallus gallus mRNA for hypothetical protein, clone 27g5 Length = 2794 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cagtgcactcatcccttcaa 206 |||||||||||||||||||| Sbjct: 484 cagtgcactcatcccttcaa 465
>gb|AC161624.4| Pan troglodytes BAC clone CH251-149E7 from chromosome unknown, complete sequence Length = 180132 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 acaacttttccagcaggggt 318 |||||||||||||||||||| Sbjct: 74788 acaacttttccagcaggggt 74807
>gb|AC079857.5| Homo sapiens BAC clone RP11-589E1 from 4, complete sequence Length = 186219 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 acaaaattgcccttgttaga 175 |||||||||||||||||||| Sbjct: 130509 acaaaattgcccttgttaga 130490
>gb|AC156796.2| Mus musculus BAC clone RP24-90N20 from chromosome 9, complete sequence Length = 204185 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 397 gtttgggtttttcttcacagaaat 420 ||||||||||||||||| |||||| Sbjct: 82301 gtttgggtttttcttcaaagaaat 82324
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cccaaacaacttttccagca 313 |||||||||||||||||||| Sbjct: 28442730 cccaaacaacttttccagca 28442749
>emb|AL136419.3|CNS01DW7 Human chromosome 14 DNA sequence BAC R-76P17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 169476 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 aaacaacttttccagcaggg 316 |||||||||||||||||||| Sbjct: 148732 aaacaacttttccagcaggg 148751 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,884,202 Number of Sequences: 3902068 Number of extensions: 3884202 Number of successful extensions: 65765 Number of sequences better than 10.0: 74 Number of HSP's better than 10.0 without gapping: 74 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 65599 Number of HSP's gapped (non-prelim): 150 length of query: 538 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 515 effective length of database: 17,143,297,704 effective search space: 8828798317560 effective search space used: 8828798317560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)