ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd20p17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_189108.2| Oryza sativa (japonica cultivar-group), mRNA 258 2e-65
2ref|XM_507141.1| PREDICTED Oryza sativa (japonica cultivar-group... 258 2e-65
3dbj|AK070227.1| Oryza sativa (japonica cultivar-group) cDNA clon... 258 2e-65
4dbj|AK060121.1| Oryza sativa (japonica cultivar-group) cDNA clon... 258 2e-65
5gb|AY106565.1| Zea mays PCO096548 mRNA sequence 176 5e-41
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
7dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
8dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
9dbj|AK060661.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 8e-15
10dbj|AP006703.1| Lotus japonicus genomic DNA, chromosome 2, clone... 56 1e-04
11emb|CT571264.2| Medicago truncatula chromosome 5 clone mth2-146m... 52 0.002
12ref|NM_121723.3| Arabidopsis thaliana electron transporter/ meta... 50 0.007
13gb|BT000984.1| Arabidopsis thaliana clone U09484 unknown protein... 50 0.007
14gb|AY035119.1| Arabidopsis thaliana unknown protein (At5g17170) ... 50 0.007
15emb|BX831408.1|CNS0A09X Arabidopsis thaliana Full-length cDNA Co... 50 0.007
16emb|BX830489.1|CNS0A065 Arabidopsis thaliana Full-length cDNA Co... 50 0.007
17emb|BX829838.1|CNS09ZY3 Arabidopsis thaliana Full-length cDNA Co... 50 0.007
18gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequ... 42 1.8
19gb|U26679.1|ABU26679 Azospirillum brasilense lateral flagellin (... 42 1.8
20gb|AC004227.1| Homo sapiens chromosome 5, P1 clone 356a8 (LBNL H... 40 6.9
21gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
22gb|AC121290.6| Mus musculus chromosome 16, clone RP23-84N4, comp... 40 6.9
23gb|AC117615.11| Mus musculus chromosome 19, clone RP23-110D20, c... 40 6.9
24gb|AC117629.16| Mus musculus chromosome 19, clone RP23-179C21, c... 40 6.9
25emb|CR391905.6| Zebrafish DNA sequence from clone DKEY-16P7 in l... 40 6.9
26gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 6.9
27emb|AL356791.9| Human DNA sequence from clone RP11-80I3 on chrom... 40 6.9
28emb|AL355481.12| Human DNA sequence from clone RP11-395N17 on ch... 40 6.9
29emb|AL035448.29|HS742J24 Human DNA sequence from clone RP4-742J2... 40 6.9
30ref|XM_781195.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.9
31emb|AL590629.16| Mouse DNA sequence from clone RP23-202F23 on ch... 40 6.9
32gb|AC023983.11| Homo sapiens chromosome 18, clone RP11-621L6, co... 40 6.9
33dbj|AK095052.1| Homo sapiens cDNA FLJ37733 fis, clone BRHIP2020827 40 6.9
34dbj|AK094349.1| Homo sapiens cDNA FLJ37030 fis, clone BRACE2011183 40 6.9
35gb|AC092547.7| Homo sapiens 3q BAC RP11-371L14 (Roswell Park Can... 40 6.9
36dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
37gb|AC157277.2| Mus musculus BAC clone RP23-465H15 from chromosom... 40 6.9
38gb|AC012449.7| Homo sapiens BAC clone RP11-321K13 from 2, comple... 40 6.9
39gb|AC106776.4| Homo sapiens chromosome 5 clone RP11-325M13, comp... 40 6.9
40dbj|AP005742.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
41dbj|BS000234.1| Pan troglodytes chromosome 22 clone:PTB-190I13, ... 40 6.9
42dbj|AB005238.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 6.9
43gb|AC134622.3| Mus musculus BAC clone RP23-13I7 from 6, complete... 40 6.9
44emb|BX927109.13| Zebrafish DNA sequence from clone CH211-80D23 i... 40 6.9
45emb|BX936417.8| Zebrafish DNA sequence from clone DKEY-231D7 in ... 40 6.9
46gb|AC007510.6|AC007510 Homo sapiens chromosome 17, clone hRPK.67... 40 6.9
47gb|AE014299.1| Shewanella oneidensis MR-1, complete genome 40 6.9
48dbj|AP001751.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 6.9
49emb|AJ617740.1| Pseudomonas putida clc transposon 40 6.9
50gb|AC164567.5| Mus musculus BAC clone RP23-64B8 from chromosome ... 40 6.9
51dbj|AP001046.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 6.9 
>ref|NM_189108.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 934

 Score =  258 bits (130), Expect = 2e-65
 Identities = 321/384 (83%), Gaps = 3/384 (0%)
 Strand = Plus / Minus

                                                                       
Query: 128 agcctattgaaggccatatacaagcaaagcccctatgccagcgatgccgataaccaaact 187
           |||||||||||||||||||||||||||||||||||  || || |||||||| | ||||||
Sbjct: 793 agcctattgaaggccatatacaagcaaagcccctactccggcaatgccgattatcaaact 734

                                                                       
Query: 188 gactatcacagtaagaggtggcagtgctccgccaatgggcttcccagactctacgttgta 247
           ||| ||||| |||| |||||| || || || ||||| | | |||| |  ||| | |  ||
Sbjct: 733 gacgatcactgtaataggtggtagcgcaccaccaatcgccctcccggtttctgcatcata 674

                                                                       
Query: 248 tcttgcgaatcgcttctttggtgcattgcactggggacagccgtactcaccaggctgttc 307
           | | ||||| |||||||||||||| ||||| || || ||||| || ||| ||||||||||
Sbjct: 673 tttcgcgaaccgcttctttggtgcgttgcattgtgggcagccatattcatcaggctgttc 614

                                                                       
Query: 308 ttcaaagggcttgggtagaaagtatatgtatccacaatcaaggcagatgtgtgttgctct 367
           ||| || |||||||| || |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 613 ttcgaaaggcttgggaaggaagtatatgtatccacaatcaaggcaaatgtgtgttgctct 554

                                                                       
Query: 368 agccttctgtgaatcagacaacttccggccaaaccgagggggcgccggcctcttgggcag 427
           |||||| ||||| || | ||| ||||||||||| |  || ||||||||||| || || ||
Sbjct: 553 agccttttgtgattccgtcaatttccggccaaatctcggaggcgccggccttttcggaag 494

                                                                       
Query: 428 gcgcttcacatcaatatcaccaccacccctgcttactacaaagtatacagagtctggctt 487
            |||||||||||||   |     |||||||||| || |||||||| ||||||||||||||
Sbjct: 493 tcgcttcacatcaa---cttgtgcacccctgctaaccacaaagtagacagagtctggctt 437

                                   
Query: 488 tgcttggatggctgtcttggtgaa 511
           ||| ||||||||||||||||||||
Sbjct: 436 tgcctggatggctgtcttggtgaa 413
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>ref|XM_507141.1| PREDICTED Oryza sativa (japonica cultivar-group), P0577B11.138 mRNA
          Length = 1003

 Score =  258 bits (130), Expect = 2e-65
 Identities = 321/384 (83%), Gaps = 3/384 (0%)
 Strand = Plus / Minus

                                                                       
Query: 128 agcctattgaaggccatatacaagcaaagcccctatgccagcgatgccgataaccaaact 187
           |||||||||||||||||||||||||||||||||||  || || |||||||| | ||||||
Sbjct: 823 agcctattgaaggccatatacaagcaaagcccctactccggcaatgccgattatcaaact 764

                                                                       
Query: 188 gactatcacagtaagaggtggcagtgctccgccaatgggcttcccagactctacgttgta 247
           ||| ||||| |||| |||||| || || || ||||| | | |||| |  ||| | |  ||
Sbjct: 763 gacgatcactgtaataggtggtagcgcaccaccaatcgccctcccggtttctgcatcata 704

                                                                       
Query: 248 tcttgcgaatcgcttctttggtgcattgcactggggacagccgtactcaccaggctgttc 307
           | | ||||| |||||||||||||| ||||| || || ||||| || ||| ||||||||||
Sbjct: 703 tttcgcgaaccgcttctttggtgcgttgcattgtgggcagccatattcatcaggctgttc 644

                                                                       
Query: 308 ttcaaagggcttgggtagaaagtatatgtatccacaatcaaggcagatgtgtgttgctct 367
           ||| || |||||||| || |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 643 ttcgaaaggcttgggaaggaagtatatgtatccacaatcaaggcaaatgtgtgttgctct 584

                                                                       
Query: 368 agccttctgtgaatcagacaacttccggccaaaccgagggggcgccggcctcttgggcag 427
           |||||| ||||| || | ||| ||||||||||| |  || ||||||||||| || || ||
Sbjct: 583 agccttttgtgattccgtcaatttccggccaaatctcggaggcgccggccttttcggaag 524

                                                                       
Query: 428 gcgcttcacatcaatatcaccaccacccctgcttactacaaagtatacagagtctggctt 487
            |||||||||||||   |     |||||||||| || |||||||| ||||||||||||||
Sbjct: 523 tcgcttcacatcaa---cttgtgcacccctgctaaccacaaagtagacagagtctggctt 467

                                   
Query: 488 tgcttggatggctgtcttggtgaa 511
           ||| ||||||||||||||||||||
Sbjct: 466 tgcctggatggctgtcttggtgaa 443
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>dbj|AK070227.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041B21, full
           insert sequence
          Length = 934

 Score =  258 bits (130), Expect = 2e-65
 Identities = 321/384 (83%), Gaps = 3/384 (0%)
 Strand = Plus / Minus

                                                                       
Query: 128 agcctattgaaggccatatacaagcaaagcccctatgccagcgatgccgataaccaaact 187
           |||||||||||||||||||||||||||||||||||  || || |||||||| | ||||||
Sbjct: 793 agcctattgaaggccatatacaagcaaagcccctactccggcaatgccgattatcaaact 734

                                                                       
Query: 188 gactatcacagtaagaggtggcagtgctccgccaatgggcttcccagactctacgttgta 247
           ||| ||||| |||| |||||| || || || ||||| | | |||| |  ||| | |  ||
Sbjct: 733 gacgatcactgtaataggtggtagcgcaccaccaatcgccctcccggtttctgcatcata 674

                                                                       
Query: 248 tcttgcgaatcgcttctttggtgcattgcactggggacagccgtactcaccaggctgttc 307
           | | ||||| |||||||||||||| ||||| || || ||||| || ||| ||||||||||
Sbjct: 673 tttcgcgaaccgcttctttggtgcgttgcattgtgggcagccatattcatcaggctgttc 614

                                                                       
Query: 308 ttcaaagggcttgggtagaaagtatatgtatccacaatcaaggcagatgtgtgttgctct 367
           ||| || |||||||| || |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 613 ttcgaaaggcttgggaaggaagtatatgtatccacaatcaaggcaaatgtgtgttgctct 554

                                                                       
Query: 368 agccttctgtgaatcagacaacttccggccaaaccgagggggcgccggcctcttgggcag 427
           |||||| ||||| || | ||| ||||||||||| |  || ||||||||||| || || ||
Sbjct: 553 agccttttgtgattccgtcaatttccggccaaatctcggaggcgccggccttttcggaag 494

                                                                       
Query: 428 gcgcttcacatcaatatcaccaccacccctgcttactacaaagtatacagagtctggctt 487
            |||||||||||||   |     |||||||||| || |||||||| ||||||||||||||
Sbjct: 493 tcgcttcacatcaa---cttgtgcacccctgctaaccacaaagtagacagagtctggctt 437

                                   
Query: 488 tgcttggatggctgtcttggtgaa 511
           ||| ||||||||||||||||||||
Sbjct: 436 tgcctggatggctgtcttggtgaa 413
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>dbj|AK060121.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-F09, full
           insert sequence
          Length = 1003

 Score =  258 bits (130), Expect = 2e-65
 Identities = 321/384 (83%), Gaps = 3/384 (0%)
 Strand = Plus / Minus

                                                                       
Query: 128 agcctattgaaggccatatacaagcaaagcccctatgccagcgatgccgataaccaaact 187
           |||||||||||||||||||||||||||||||||||  || || |||||||| | ||||||
Sbjct: 823 agcctattgaaggccatatacaagcaaagcccctactccggcaatgccgattatcaaact 764

                                                                       
Query: 188 gactatcacagtaagaggtggcagtgctccgccaatgggcttcccagactctacgttgta 247
           ||| ||||| |||| |||||| || || || ||||| | | |||| |  ||| | |  ||
Sbjct: 763 gacgatcactgtaataggtggtagcgcaccaccaatcgccctcccggtttctgcatcata 704

                                                                       
Query: 248 tcttgcgaatcgcttctttggtgcattgcactggggacagccgtactcaccaggctgttc 307
           | | ||||| |||||||||||||| ||||| || || ||||| || ||| ||||||||||
Sbjct: 703 tttcgcgaaccgcttctttggtgcgttgcattgtgggcagccatattcatcaggctgttc 644

                                                                       
Query: 308 ttcaaagggcttgggtagaaagtatatgtatccacaatcaaggcagatgtgtgttgctct 367
           ||| || |||||||| || |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 643 ttcgaaaggcttgggaaggaagtatatgtatccacaatcaaggcaaatgtgtgttgctct 584

                                                                       
Query: 368 agccttctgtgaatcagacaacttccggccaaaccgagggggcgccggcctcttgggcag 427
           |||||| ||||| || | ||| ||||||||||| |  || ||||||||||| || || ||
Sbjct: 583 agccttttgtgattccgtcaatttccggccaaatctcggaggcgccggccttttcggaag 524

                                                                       
Query: 428 gcgcttcacatcaatatcaccaccacccctgcttactacaaagtatacagagtctggctt 487
            |||||||||||||   |     |||||||||| || |||||||| ||||||||||||||
Sbjct: 523 tcgcttcacatcaa---cttgtgcacccctgctaaccacaaagtagacagagtctggctt 467

                                   
Query: 488 tgcttggatggctgtcttggtgaa 511
           ||| ||||||||||||||||||||
Sbjct: 466 tgcctggatggctgtcttggtgaa 443
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>gb|AY106565.1| Zea mays PCO096548 mRNA sequence
          Length = 1026

 Score =  176 bits (89), Expect = 5e-41
 Identities = 283/347 (81%), Gaps = 3/347 (0%)
 Strand = Plus / Minus

                                                                       
Query: 165 ccagcgatgccgataaccaaactgactatcacagtaagaggtggcagtgctccgccaatg 224
           |||||||||||||| |||||||| || ||||| |  | ||| ||||| || ||||| |||
Sbjct: 850 ccagcgatgccgatcaccaaacttacgatcacggcgataggcggcagagcgccgccgatg 791

                                                                       
Query: 225 ggcttcccagactctacgttgtatcttgcgaatcgcttctttggtgcattgcactgggga 284
           | |||||| |   |  ||| ||| || || || |||||||| || || |||||||| || 
Sbjct: 790 gccttcccggtggcagcgtcgtacctcgcaaaccgcttcttcggcgcgttgcactgtggg 731

                                                                       
Query: 285 cagccgtactcaccaggctgttcttcaaagggcttgggtagaaagtatatgtatccacaa 344
           || ||||| ||  | |||||||| ||||| ||||||||||| ||||||||||| ||||||
Sbjct: 730 caaccgtagtcgtcgggctgttcgtcaaaaggcttgggtaggaagtatatgtacccacaa 671

                                                                       
Query: 345 tcaaggcagatgtgtgttgctctagccttctgtgaatcagacaacttccggccaaaccga 404
           |||||||||| ||| ||||||||  |||| |||||||||| || |||||| |||||||| 
Sbjct: 670 tcaaggcagacgtgcgttgctctctccttttgtgaatcagtcagcttccgtccaaaccgg 611

                                                                       
Query: 405 gggggcgccggcctcttgggcaggcgcttcacatcaatatcaccaccacccctgcttact 464
           || |||||||||||||| || ||||||||||| ||||   |  |  |||||||||| || 
Sbjct: 610 ggtggcgccggcctcttaggtaggcgcttcacgtcaa---cttcggcacccctgctcacg 554

                                                          
Query: 465 acaaagtatacagagtctggctttgcttggatggctgtcttggtgaa 511
           || ||||| || ||||||| ||| |||||||||||||||||||||||
Sbjct: 553 acgaagtagacggagtctgacttcgcttggatggctgtcttggtgaa 507
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  101 bits (51), Expect = 2e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                           
Query: 302     ctgttcttcaaagggcttgggtagaaagtatatgtatccacaatcaaggcagatgtgtgt 361
               ||||||||| || |||||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 3689832 ctgttcttcgaaaggcttgggaaggaagtatatgtatccacaatcaaggcaaatgtgtgt 3689773

                          
Query: 362     tgctctagcct 372
               |||||||||||
Sbjct: 3689772 tgctctagcct 3689762



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 144/177 (81%)
 Strand = Plus / Minus

                                                                           
Query: 128     agcctattgaaggccatatacaagcaaagcccctatgccagcgatgccgataaccaaact 187
               |||||||||||||||||||||||||||||||||||  || || |||||||| | ||||||
Sbjct: 3690112 agcctattgaaggccatatacaagcaaagcccctactccggcaatgccgattatcaaact 3690053

                                                                           
Query: 188     gactatcacagtaagaggtggcagtgctccgccaatgggcttcccagactctacgttgta 247
               ||| ||||| |||| |||||| || || || ||||| | | |||| |  ||| | |  ||
Sbjct: 3690052 gacgatcactgtaataggtggtagcgcaccaccaatcgccctcccggtttctgcatcata 3689993

                                                                        
Query: 248     tcttgcgaatcgcttctttggtgcattgcactggggacagccgtactcaccaggctg 304
               | | ||||| |||||||||||||| ||||| || || ||||| || ||| |||||||
Sbjct: 3689992 tttcgcgaaccgcttctttggtgcgttgcattgtgggcagccatattcatcaggctg 3689936



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                        
Query: 455     cctgcttactacaaagtatacagagtctggctttgcttggatggctgtcttggtgaa 511
               |||||| || |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 3689386 cctgctaaccacaaagtagacagagtctggctttgcctggatggctgtcttggtgaa 3689330



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                   
Query: 390     ttccggccaaaccgagggggcgccggcctcttgggcaggcgcttcacatcaa 441
               ||||||||||| |  || ||||||||||| || || || |||||||||||||
Sbjct: 3689638 ttccggccaaatctcggaggcgccggccttttcggaagtcgcttcacatcaa 3689587
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>dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ9990_A01
          Length = 101684

 Score =  101 bits (51), Expect = 2e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                         
Query: 302   ctgttcttcaaagggcttgggtagaaagtatatgtatccacaatcaaggcagatgtgtgt 361
             ||||||||| || |||||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 13329 ctgttcttcgaaaggcttgggaaggaagtatatgtatccacaatcaaggcaaatgtgtgt 13270

                        
Query: 362   tgctctagcct 372
             |||||||||||
Sbjct: 13269 tgctctagcct 13259



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 144/177 (81%)
 Strand = Plus / Minus

                                                                         
Query: 128   agcctattgaaggccatatacaagcaaagcccctatgccagcgatgccgataaccaaact 187
             |||||||||||||||||||||||||||||||||||  || || |||||||| | ||||||
Sbjct: 13609 agcctattgaaggccatatacaagcaaagcccctactccggcaatgccgattatcaaact 13550

                                                                         
Query: 188   gactatcacagtaagaggtggcagtgctccgccaatgggcttcccagactctacgttgta 247
             ||| ||||| |||| |||||| || || || ||||| | | |||| |  ||| | |  ||
Sbjct: 13549 gacgatcactgtaataggtggtagcgcaccaccaatcgccctcccggtttctgcatcata 13490

                                                                      
Query: 248   tcttgcgaatcgcttctttggtgcattgcactggggacagccgtactcaccaggctg 304
             | | ||||| |||||||||||||| ||||| || || ||||| || ||| |||||||
Sbjct: 13489 tttcgcgaaccgcttctttggtgcgttgcattgtgggcagccatattcatcaggctg 13433



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                      
Query: 455   cctgcttactacaaagtatacagagtctggctttgcttggatggctgtcttggtgaa 511
             |||||| || |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 12883 cctgctaaccacaaagtagacagagtctggctttgcctggatggctgtcttggtgaa 12827



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                 
Query: 390   ttccggccaaaccgagggggcgccggcctcttgggcaggcgcttcacatcaa 441
             ||||||||||| |  || ||||||||||| || || || |||||||||||||
Sbjct: 13135 ttccggccaaatctcggaggcgccggccttttcggaagtcgcttcacatcaa 13084
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>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0577B11
          Length = 180355

 Score =  101 bits (51), Expect = 2e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                          
Query: 302    ctgttcttcaaagggcttgggtagaaagtatatgtatccacaatcaaggcagatgtgtgt 361
              ||||||||| || |||||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 168338 ctgttcttcgaaaggcttgggaaggaagtatatgtatccacaatcaaggcaaatgtgtgt 168279

                         
Query: 362    tgctctagcct 372
              |||||||||||
Sbjct: 168278 tgctctagcct 168268



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 144/177 (81%)
 Strand = Plus / Minus

                                                                          
Query: 128    agcctattgaaggccatatacaagcaaagcccctatgccagcgatgccgataaccaaact 187
              |||||||||||||||||||||||||||||||||||  || || |||||||| | ||||||
Sbjct: 168618 agcctattgaaggccatatacaagcaaagcccctactccggcaatgccgattatcaaact 168559

                                                                          
Query: 188    gactatcacagtaagaggtggcagtgctccgccaatgggcttcccagactctacgttgta 247
              ||| ||||| |||| |||||| || || || ||||| | | |||| |  ||| | |  ||
Sbjct: 168558 gacgatcactgtaataggtggtagcgcaccaccaatcgccctcccggtttctgcatcata 168499

                                                                       
Query: 248    tcttgcgaatcgcttctttggtgcattgcactggggacagccgtactcaccaggctg 304
              | | ||||| |||||||||||||| ||||| || || ||||| || ||| |||||||
Sbjct: 168498 tttcgcgaaccgcttctttggtgcgttgcattgtgggcagccatattcatcaggctg 168442



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                       
Query: 455    cctgcttactacaaagtatacagagtctggctttgcttggatggctgtcttggtgaa 511
              |||||| || |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 167892 cctgctaaccacaaagtagacagagtctggctttgcctggatggctgtcttggtgaa 167836



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                  
Query: 390    ttccggccaaaccgagggggcgccggcctcttgggcaggcgcttcacatcaa 441
              ||||||||||| |  || ||||||||||| || || || |||||||||||||
Sbjct: 168144 ttccggccaaatctcggaggcgccggccttttcggaagtcgcttcacatcaa 168093
to top
>dbj|AK060661.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-B02, full
           insert sequence
          Length = 297

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 72/81 (88%)
 Strand = Plus / Minus

                                                                       
Query: 128 agcctattgaaggccatatacaagcaaagcccctatgccagcgatgccgataaccaaact 187
           |||||||||||||||||||||||||||||||||||  || || |||||||| | ||||||
Sbjct: 116 agcctattgaaggccatatacaagcaaagcccctactccggcaatgccgattatcaaact 57

                                
Query: 188 gactatcacagtaagaggtgg 208
           ||| ||||| |||| ||||||
Sbjct: 56  gacgatcactgtaataggtgg 36
to top
>dbj|AP006703.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01O03, TM0588b,
             complete sequence
          Length = 45450

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                         
Query: 329   gtatatgtatccacaatcaaggcagatgtgtgttgctctagcct 372
             ||||||| |||||||||||||||| ||||| || ||||||||||
Sbjct: 29276 gtatatgaatccacaatcaaggcaaatgtgagtagctctagcct 29319



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                       
Query: 455   cctgcttactacaaagtatacagagtctggctttgcttggat 496
             |||||| || |||||||| |||||||||||||| ||||||||
Sbjct: 29887 cctgctgacaacaaagtagacagagtctggcttagcttggat 29928
to top
>emb|CT571264.2| Medicago truncatula chromosome 5 clone mth2-146m15, COMPLETE SEQUENCE
          Length = 141614

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                           
Query: 327   aagtatatgtatccacaatcaaggcagatgtgtgttgctctagcct 372
             |||||||||||||| || |||||||| ||||| || ||||||||||
Sbjct: 78988 aagtatatgtatccgcagtcaaggcaaatgtgagtagctctagcct 78943
to top
>ref|NM_121723.3| Arabidopsis thaliana electron transporter/ metal ion binding /
           protein binding AT5G17170 mRNA, complete cds
          Length = 1131

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                       
Query: 300 ggctgttcttcaaagggcttgggtagaaagtatatgtatccacaatcaaggcagatgtgt 359
           |||||||| ||||| |  ||||||| |  ||||||| ||||||||||||| || ||||| 
Sbjct: 779 ggctgttcgtcaaaagatttgggtaaagtgtatatgaatccacaatcaagacaaatgtga 720

                            
Query: 360 gttgctctagccttctg 376
           || ||||| ||||||||
Sbjct: 719 gtagctcttgccttctg 703
to top
>gb|BT000984.1| Arabidopsis thaliana clone U09484 unknown protein (At5g17170) mRNA,
           complete cds
          Length = 847

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                       
Query: 300 ggctgttcttcaaagggcttgggtagaaagtatatgtatccacaatcaaggcagatgtgt 359
           |||||||| ||||| |  ||||||| |  ||||||| ||||||||||||| || ||||| 
Sbjct: 647 ggctgttcgtcaaaagatttgggtaaagtgtatatgaatccacaatcaagacaaatgtga 588

                            
Query: 360 gttgctctagccttctg 376
           || ||||| ||||||||
Sbjct: 587 gtagctcttgccttctg 571
to top
>gb|AY035119.1| Arabidopsis thaliana unknown protein (At5g17170) mRNA, complete cds
          Length = 1100

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                       
Query: 300 ggctgttcttcaaagggcttgggtagaaagtatatgtatccacaatcaaggcagatgtgt 359
           |||||||| ||||| |  ||||||| |  ||||||| ||||||||||||| || ||||| 
Sbjct: 732 ggctgttcgtcaaaagatttgggtaaagtgtatatgaatccacaatcaagacaaatgtga 673

                            
Query: 360 gttgctctagccttctg 376
           || ||||| ||||||||
Sbjct: 672 gtagctcttgccttctg 656
to top
>emb|BX831408.1|CNS0A09X Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS88ZA11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 817

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                       
Query: 300 ggctgttcttcaaagggcttgggtagaaagtatatgtatccacaatcaaggcagatgtgt 359
           |||||||| ||||| |  ||||||| |  ||||||| ||||||||||||| || ||||| 
Sbjct: 529 ggctgttcgtcaaaagatttgggtaaagtgtatatgaatccacaatcaagacaaatgtga 470

                            
Query: 360 gttgctctagccttctg 376
           || ||||| ||||||||
Sbjct: 469 gtagctcttgccttctg 453
to top
>emb|BX830489.1|CNS0A065 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB85ZC12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 976

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                       
Query: 300 ggctgttcttcaaagggcttgggtagaaagtatatgtatccacaatcaaggcagatgtgt 359
           |||||||| ||||| |  ||||||| |  ||||||| ||||||||||||| || ||||| 
Sbjct: 700 ggctgttcgtcaaaagatttgggtaaagtgtatatgaatccacaatcaagacaaatgtga 641

                            
Query: 360 gttgctctagccttctg 376
           || ||||| ||||||||
Sbjct: 640 gtagctcttgccttctg 624
to top
>emb|BX829838.1|CNS09ZY3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB40ZA04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 996

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                       
Query: 300 ggctgttcttcaaagggcttgggtagaaagtatatgtatccacaatcaaggcagatgtgt 359
           |||||||| ||||| |  ||||||| |  ||||||| ||||||||||||| || ||||| 
Sbjct: 780 ggctgttcgtcaaaagatttgggtaaagtgtatatgaatccacaatcaagacaaatgtga 721

                            
Query: 360 gttgctctagccttctg 376
           || ||||| ||||||||
Sbjct: 720 gtagctcttgccttctg 704



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 132 tattgaaggccatatacaagcaaagc 157
           |||||||| |||||||||||||||||
Sbjct: 953 tattgaagaccatatacaagcaaagc 928
to top
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence
          Length = 2906179

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 171    atgccgataaccaaactgact 191
              |||||||||||||||||||||
Sbjct: 241932 atgccgataaccaaactgact 241912
to top
>gb|U26679.1|ABU26679 Azospirillum brasilense lateral flagellin (laf1) gene, complete cds
          Length = 1573

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 401  ccgagggggcgccggcctctt 421
            |||||||||||||||||||||
Sbjct: 1483 ccgagggggcgccggcctctt 1503
to top
>gb|AC004227.1| Homo sapiens chromosome 5, P1 clone 356a8 (LBNL H32), complete sequence
          Length = 72941

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    tattgaaattttctgttaga 58
             ||||||||||||||||||||
Sbjct: 12397 tattgaaattttctgttaga 12416
to top
>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone
             OSJNBb0031H05, complete sequence
          Length = 141200

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 94    catggccagaacaaaatttctcaa 117
             |||||||||||| |||||||||||
Sbjct: 17747 catggccagaaccaaatttctcaa 17724
to top
>gb|AC121290.6| Mus musculus chromosome 16, clone RP23-84N4, complete sequence
          Length = 241184

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     catcattattgaaattttct 52
              ||||||||||||||||||||
Sbjct: 124240 catcattattgaaattttct 124259



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     catcattattgaaattttct 52
              ||||||||||||||||||||
Sbjct: 102135 catcattattgaaattttct 102154
to top
>gb|AC117615.11| Mus musculus chromosome 19, clone RP23-110D20, complete sequence
          Length = 191809

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 218    gccaatgggcttcccagactctac 241
              |||||||||||||||||| |||||
Sbjct: 182397 gccaatgggcttcccagagtctac 182374
to top
>gb|AC117629.16| Mus musculus chromosome 19, clone RP23-179C21, complete sequence
          Length = 248718

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 218    gccaatgggcttcccagactctac 241
              |||||||||||||||||| |||||
Sbjct: 170916 gccaatgggcttcccagagtctac 170939
to top
>emb|CR391905.6| Zebrafish DNA sequence from clone DKEY-16P7 in linkage group 9, complete
              sequence
          Length = 221511

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 46     attttctgttagatagagta 65
              ||||||||||||||||||||
Sbjct: 110397 attttctgttagatagagta 110416
to top
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 154     aagcccctatgccagcgatg 173
               ||||||||||||||||||||
Sbjct: 3613408 aagcccctatgccagcgatg 3613427
to top
>emb|AL356791.9| Human DNA sequence from clone RP11-80I3 on chromosome 9, complete
             sequence
          Length = 101157

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    agatagagtacatgagaaat 75
             ||||||||||||||||||||
Sbjct: 15461 agatagagtacatgagaaat 15480
to top
>emb|AL355481.12| Human DNA sequence from clone RP11-395N17 on chromosome 13 Contains the
             a novel gene (KIAA0918) and a homeobox protein pseudogene,
             complete sequence
          Length = 122435

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 4     agcctaaactaacatgttgcattt 27
             ||||| ||||||||||||||||||
Sbjct: 32503 agccttaactaacatgttgcattt 32526
to top
>emb|AL035448.29|HS742J24 Human DNA sequence from clone RP4-742J24 on chromosome 20p11.23-12.3
             Contains the BTBD3 gene for BTB (POZ) domain containing 3
             (KIAA0952), a novel gene and a CpG island, complete
             sequence
          Length = 167075

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    atggccagaacaaaatttct 114
             ||||||||||||||||||||
Sbjct: 13621 atggccagaacaaaatttct 13640
to top
>ref|XM_781195.1| PREDICTED: Strongylocentrotus purpuratus similar to DEP domain
           containing 5 isoform 2 (LOC581181), mRNA
          Length = 372

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 290 gtactcaccaggctgttctt 309
           ||||||||||||||||||||
Sbjct: 356 gtactcaccaggctgttctt 337
to top
>emb|AL590629.16| Mouse DNA sequence from clone RP23-202F23 on chromosome X, complete
             sequence
          Length = 171883

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 291   tactcaccaggctgttcttc 310
             ||||||||||||||||||||
Sbjct: 12522 tactcaccaggctgttcttc 12503
to top
>gb|AC023983.11| Homo sapiens chromosome 18, clone RP11-621L6, complete sequence
          Length = 190225

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 195    acagtaagaggtggcagtgc 214
              ||||||||||||||||||||
Sbjct: 105365 acagtaagaggtggcagtgc 105346
to top
>dbj|AK095052.1| Homo sapiens cDNA FLJ37733 fis, clone BRHIP2020827
          Length = 2906

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 179 aaccaaactgactatcacag 198
           ||||||||||||||||||||
Sbjct: 830 aaccaaactgactatcacag 811
to top
>dbj|AK094349.1| Homo sapiens cDNA FLJ37030 fis, clone BRACE2011183
          Length = 2304

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 179 aaccaaactgactatcacag 198
           ||||||||||||||||||||
Sbjct: 229 aaccaaactgactatcacag 210
to top
>gb|AC092547.7| Homo sapiens 3q BAC RP11-371L14 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 178328

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 179    aaccaaactgactatcacag 198
              ||||||||||||||||||||
Sbjct: 177289 aaccaaactgactatcacag 177270
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 94       catggccagaacaaaatttctcaa 117
                |||||||||||| |||||||||||
Sbjct: 21561121 catggccagaaccaaatttctcaa 21561098
to top
>gb|AC157277.2| Mus musculus BAC clone RP23-465H15 from chromosome 15, complete
             sequence
          Length = 177253

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 311   aaagggcttgggtagaaagt 330
             ||||||||||||||||||||
Sbjct: 54024 aaagggcttgggtagaaagt 54005
to top
>gb|AC012449.7| Homo sapiens BAC clone RP11-321K13 from 2, complete sequence
          Length = 109335

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   acagtaagaggtggcagtgc 214
             ||||||||||||||||||||
Sbjct: 66769 acagtaagaggtggcagtgc 66750
to top
>gb|AC106776.4| Homo sapiens chromosome 5 clone RP11-325M13, complete sequence
          Length = 114419

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 311   aaagggcttgggtagaaagt 330
             ||||||||||||||||||||
Sbjct: 80029 aaagggcttgggtagaaagt 80048
to top
>dbj|AP005742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0489D11
          Length = 150757

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 94     catggccagaacaaaatttctcaa 117
              |||||||||||| |||||||||||
Sbjct: 122731 catggccagaaccaaatttctcaa 122708
to top
>dbj|BS000234.1| Pan troglodytes chromosome 22 clone:PTB-190I13, map 22, complete
             sequences
          Length = 174520

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 353   gatgtgtgttgctctagcct 372
             ||||||||||||||||||||
Sbjct: 29577 gatgtgtgttgctctagcct 29558
to top
>dbj|AB005238.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKP11
          Length = 75188

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 329  gtatatgtatccacaatcaaggcagatgtgtgttgctctagcct 372
            ||||||| ||||||||||||| || ||||| || ||||| ||||
Sbjct: 9657 gtatatgaatccacaatcaagacaaatgtgagtagctcttgcct 9614
to top
>gb|AC134622.3| Mus musculus BAC clone RP23-13I7 from 6, complete sequence
          Length = 203072

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 455    cctgcttactacaaagtata 474
              ||||||||||||||||||||
Sbjct: 154790 cctgcttactacaaagtata 154809
to top
>emb|BX927109.13| Zebrafish DNA sequence from clone CH211-80D23 in linkage group 18,
              complete sequence
          Length = 169784

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     attttaccccatcattattg 43
              ||||||||||||||||||||
Sbjct: 103124 attttaccccatcattattg 103105
to top
>emb|BX936417.8| Zebrafish DNA sequence from clone DKEY-231D7 in linkage group 18,
             complete sequence
          Length = 151853

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    attttaccccatcattattg 43
             ||||||||||||||||||||
Sbjct: 65958 attttaccccatcattattg 65977
to top
>gb|AC007510.6|AC007510 Homo sapiens chromosome 17, clone hRPK.678_P_16, complete sequence
          Length = 156420

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 179   aaccaaactgactatcacag 198
             ||||||||||||||||||||
Sbjct: 20009 aaccaaactgactatcacag 20028
to top
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 161     tatgccagcgatgccgataa 180
               ||||||||||||||||||||
Sbjct: 2207470 tatgccagcgatgccgataa 2207451
to top
>dbj|AP001751.1| Homo sapiens genomic DNA, chromosome 21q, section 95/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 353  gatgtgtgttgctctagcct 372
            ||||||||||||||||||||
Sbjct: 1276 gatgtgtgttgctctagcct 1257
to top
>emb|AJ617740.1| Pseudomonas putida clc transposon
          Length = 105027

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   aagcccctatgccagcgatg 173
             ||||||||||||||||||||
Sbjct: 50709 aagcccctatgccagcgatg 50690
to top
>gb|AC164567.5| Mus musculus BAC clone RP23-64B8 from chromosome 10, complete sequence
          Length = 262262

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 108    aatttctcaagagatgaaaa 127
              ||||||||||||||||||||
Sbjct: 172910 aatttctcaagagatgaaaa 172891
to top
>dbj|AP001046.1| Homo sapiens genomic DNA, chromosome 21, clone:KB43F12, MX1-D21S171
            region, complete sequence
          Length = 158063

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 353  gatgtgtgttgctctagcct 372
            ||||||||||||||||||||
Sbjct: 1276 gatgtgtgttgctctagcct 1257


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,470,717
Number of Sequences: 3902068
Number of extensions: 4470717
Number of successful extensions: 84771
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84563
Number of HSP's gapped (non-prelim): 208
length of query: 512
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 489
effective length of database: 17,143,297,704
effective search space: 8383072577256
effective search space used: 8383072577256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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